View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2574_low_10 (Length: 294)
Name: NF2574_low_10
Description: NF2574
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2574_low_10 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 264; Significance: 1e-147; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 19 - 294
Target Start/End: Complemental strand, 5385276 - 5385001
Alignment:
| Q |
19 |
gaggtatatgcctcaaccttgaggtctttggttcatggctgggtaatgaaaaaaggtcgaaagagatttataatcccatgaggagtgaaggcatgcttat |
118 |
Q |
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| T |
5385276 |
gaggtatatgcctcaaccttgaggtctttggttcatggctgggtaatgaaaaaaggtcgaaagagatttataatcccatgaggagtgaaggcatgcttat |
5385177 |
T |
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| Q |
119 |
tgaaattaatttaaaaattgttataaatcagttttgttaattaggggtgctcagtctcactcatagctgtataacaaaatgttgtcaaataacagttaca |
218 |
Q |
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| T |
5385176 |
tgaaattaatttaaaaattgctataaatcagttttgttaattagtggtgctcagtctcactcatagctgtataacaaaatgttgtcaaataacagttaca |
5385077 |
T |
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| Q |
219 |
taagcaaaatagcactgttccttaacacaaattgaataaaacgttattttccatgattcccgaacaatactggagg |
294 |
Q |
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| T |
5385076 |
taagcaaaatagcactgttgcttaacacaaattgaataaaacgttattttccatgattcccgaacaatactggagg |
5385001 |
T |
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