View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2574_low_2 (Length: 444)

Name: NF2574_low_2
Description: NF2574
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2574_low_2
NF2574_low_2
[»] chr7 (47 HSPs)
chr7 (19-440)||(9872611-9873032)
chr7 (99-165)||(47134747-47134813)
chr7 (94-227)||(46081986-46082121)
chr7 (98-243)||(48157109-48157253)
chr7 (106-222)||(44151477-44151592)
chr7 (94-182)||(46104552-46104640)
chr7 (94-243)||(30496641-30496790)
chr7 (190-227)||(3241394-3241431)
chr7 (190-223)||(17989103-17989136)
chr7 (96-132)||(3468661-3468697)
chr7 (97-141)||(39539769-39539813)
chr7 (188-227)||(2999144-2999183)
chr7 (98-129)||(8341878-8341909)
chr7 (109-176)||(24363601-24363668)
chr7 (190-241)||(28165030-28165081)
chr7 (94-129)||(29290383-29290418)
chr7 (94-129)||(33645946-33645981)
chr7 (94-129)||(36537958-36537993)
chr7 (94-145)||(39551533-39551584)
chr7 (94-129)||(39568309-39568344)
chr7 (190-241)||(45593799-45593850)
chr7 (190-224)||(5006589-5006623)
chr7 (95-145)||(7244714-7244764)
chr7 (94-140)||(9423579-9423625)
chr7 (159-225)||(9527140-9527205)
chr7 (93-127)||(11208498-11208532)
chr7 (94-140)||(39360062-39360108)
chr7 (190-236)||(39591547-39591593)
chr7 (99-209)||(44821930-44822039)
chr7 (194-227)||(753288-753321)
chr7 (94-123)||(941596-941625)
chr7 (158-243)||(1417201-1417285)
chr7 (94-143)||(4001623-4001672)
chr7 (200-241)||(5373164-5373205)
chr7 (103-172)||(6263358-6263426)
chr7 (94-143)||(21247962-21248011)
chr7 (94-143)||(24967097-24967146)
chr7 (94-135)||(28520997-28521038)
chr7 (158-227)||(47004040-47004108)
chr7 (157-234)||(47046156-47046232)
chr7 (197-242)||(49060478-49060523)
chr7 (197-237)||(992013-992053)
chr7 (94-130)||(6633913-6633949)
chr7 (97-129)||(28076604-28076636)
chr7 (189-241)||(31341133-31341185)
chr7 (195-243)||(35808989-35809037)
chr7 (94-126)||(39334246-39334278)
[»] chr5 (39 HSPs)
chr5 (94-227)||(2568610-2568743)
chr5 (98-217)||(10272420-10272538)
chr5 (98-241)||(18704025-18704166)
chr5 (190-241)||(29117010-29117061)
chr5 (94-227)||(35960367-35960498)
chr5 (190-240)||(985573-985623)
chr5 (105-219)||(18543193-18543306)
chr5 (94-145)||(11700363-11700414)
chr5 (110-227)||(15074750-15074864)
chr5 (157-227)||(14295459-14295528)
chr5 (94-135)||(18700428-18700469)
chr5 (190-227)||(28586846-28586883)
chr5 (190-243)||(35135742-35135795)
chr5 (94-130)||(11457147-11457183)
chr5 (159-223)||(39823171-39823234)
chr5 (201-241)||(40048371-40048411)
chr5 (97-145)||(41957439-41957487)
chr5 (94-129)||(38766530-38766565)
chr5 (197-243)||(912736-912782)
chr5 (95-145)||(8177518-8177568)
chr5 (191-241)||(10280657-10280707)
chr5 (108-227)||(10303754-10303867)
chr5 (197-231)||(32969204-32969238)
chr5 (196-241)||(7096213-7096258)
chr5 (94-143)||(7674684-7674733)
chr5 (94-131)||(10152382-10152419)
chr5 (94-227)||(17368629-17368761)
chr5 (94-123)||(32172709-32172738)
chr5 (190-227)||(37063154-37063191)
chr5 (94-123)||(38047864-38047893)
chr5 (94-123)||(40499711-40499740)
chr5 (105-145)||(10638531-10638571)
chr5 (190-241)||(12521490-12521539)
chr5 (190-230)||(12595820-12595860)
chr5 (190-226)||(30585630-30585666)
chr5 (190-222)||(31687993-31688025)
chr5 (189-225)||(31694473-31694509)
chr5 (191-227)||(35095864-35095900)
chr5 (94-210)||(41016149-41016263)
[»] chr6 (34 HSPs)
chr6 (99-227)||(4006667-4006794)
chr6 (191-243)||(32975915-32975967)
chr6 (94-145)||(9027612-9027663)
chr6 (188-227)||(24774711-24774750)
chr6 (95-224)||(281834-281962)
chr6 (96-236)||(4246354-4246493)
chr6 (190-242)||(24836279-24836331)
chr6 (93-145)||(27909622-27909674)
chr6 (94-166)||(34939526-34939598)
chr6 (96-135)||(2767736-2767775)
chr6 (191-226)||(4420571-4420606)
chr6 (190-241)||(10452440-10452491)
chr6 (94-141)||(10616526-10616573)
chr6 (190-241)||(33068641-33068692)
chr6 (97-168)||(34939755-34939826)
chr6 (157-227)||(1402949-1403018)
chr6 (94-140)||(1669783-1669829)
chr6 (159-241)||(2514641-2514722)
chr6 (99-145)||(3528837-3528883)
chr6 (97-223)||(9667973-9668098)
chr6 (193-227)||(30865435-30865469)
chr6 (189-227)||(35095006-35095044)
chr6 (198-227)||(13360688-13360717)
chr6 (190-243)||(27893984-27894037)
chr6 (157-230)||(28621158-28621230)
chr6 (94-135)||(30863290-30863331)
chr6 (94-123)||(32917253-32917282)
chr6 (92-176)||(2160920-2161004)
chr6 (189-241)||(6654554-6654606)
chr6 (159-227)||(9093606-9093673)
chr6 (195-227)||(30784510-30784542)
chr6 (195-243)||(32513762-32513809)
chr6 (191-243)||(33500562-33500614)
chr6 (94-146)||(33832258-33832310)
[»] chr2 (42 HSPs)
chr2 (92-231)||(14666497-14666635)
chr2 (157-241)||(10143111-10143194)
chr2 (100-227)||(656768-656894)
chr2 (94-145)||(44606095-44606146)
chr2 (157-227)||(17952749-17952818)
chr2 (100-236)||(1939323-1939458)
chr2 (94-129)||(9878667-9878702)
chr2 (157-236)||(44439408-44439486)
chr2 (94-132)||(29936040-29936078)
chr2 (98-140)||(30538162-30538204)
chr2 (191-241)||(33576675-33576725)
chr2 (94-204)||(40158694-40158803)
chr2 (197-241)||(5903240-5903284)
chr2 (157-241)||(28803554-28803637)
chr2 (97-217)||(43141834-43141953)
chr2 (94-129)||(1160656-1160691)
chr2 (190-241)||(3673746-3673797)
chr2 (157-212)||(5043608-5043662)
chr2 (94-145)||(11063522-11063573)
chr2 (157-220)||(11513858-11513920)
chr2 (191-241)||(27288572-27288622)
chr2 (93-123)||(28803514-28803544)
chr2 (191-241)||(34054982-34055032)
chr2 (94-140)||(43065435-43065481)
chr2 (94-227)||(1742017-1742149)
chr2 (96-129)||(7283046-7283079)
chr2 (190-243)||(15171187-15171240)
chr2 (190-227)||(32098388-32098425)
chr2 (190-227)||(33192146-33192183)
chr2 (95-140)||(33525953-33525998)
chr2 (190-227)||(37053547-37053584)
chr2 (96-129)||(41809232-41809265)
chr2 (189-241)||(3102632-3102684)
chr2 (191-243)||(5045238-5045290)
chr2 (189-241)||(5133711-5133763)
chr2 (190-238)||(5511507-5511555)
chr2 (94-209)||(5759560-5759674)
chr2 (189-241)||(9551518-9551570)
chr2 (96-176)||(10563545-10563625)
chr2 (94-122)||(11344755-11344783)
chr2 (190-226)||(33256694-33256730)
chr2 (99-135)||(44269010-44269046)
[»] chr8 (36 HSPs)
chr8 (107-241)||(28769337-28769470)
chr8 (105-241)||(11795031-11795166)
chr8 (190-241)||(5071047-5071098)
chr8 (94-169)||(11569442-11569517)
chr8 (94-145)||(25869251-25869302)
chr8 (189-227)||(40728497-40728535)
chr8 (190-227)||(10437838-10437875)
chr8 (94-143)||(41620276-41620325)
chr8 (193-241)||(11119082-11119130)
chr8 (189-241)||(11188234-11188286)
chr8 (94-154)||(13000409-13000469)
chr8 (195-234)||(8799351-8799390)
chr8 (190-237)||(26820142-26820189)
chr8 (97-236)||(31862437-31862575)
chr8 (156-227)||(35869790-35869860)
chr8 (188-227)||(39392739-39392778)
chr8 (99-182)||(2091758-2091843)
chr8 (99-145)||(2594987-2595033)
chr8 (189-227)||(14482155-14482193)
chr8 (189-223)||(20672729-20672763)
chr8 (111-209)||(26284797-26284894)
chr8 (94-147)||(32840970-32841024)
chr8 (159-227)||(926440-926508)
chr8 (94-143)||(9540981-9541030)
chr8 (190-227)||(12291696-12291733)
chr8 (99-140)||(27158111-27158152)
chr8 (192-241)||(29699193-29699242)
chr8 (94-123)||(30987976-30988005)
chr8 (94-123)||(31875580-31875609)
chr8 (189-229)||(8066920-8066960)
chr8 (193-229)||(10218865-10218901)
chr8 (105-241)||(12361131-12361266)
chr8 (94-122)||(37740412-37740440)
chr8 (103-135)||(38421308-38421340)
chr8 (94-182)||(39551194-39551282)
chr8 (189-241)||(42370440-42370492)
[»] chr3 (32 HSPs)
chr3 (93-223)||(1816540-1816669)
chr3 (94-141)||(41724250-41724297)
chr3 (157-225)||(28306113-28306180)
chr3 (94-225)||(31337387-31337516)
chr3 (94-129)||(37273184-37273219)
chr3 (94-145)||(43115090-43115141)
chr3 (94-132)||(14598538-14598576)
chr3 (192-241)||(8007777-8007826)
chr3 (94-227)||(24887269-24887400)
chr3 (99-140)||(36200135-36200176)
chr3 (190-227)||(49586996-49587033)
chr3 (190-227)||(51278237-51278274)
chr3 (196-243)||(24605102-24605149)
chr3 (156-243)||(37788798-37788883)
chr3 (190-241)||(40122832-40122883)
chr3 (190-241)||(48364959-48365010)
chr3 (197-227)||(2606375-2606405)
chr3 (190-243)||(12985403-12985454)
chr3 (197-227)||(34318041-34318071)
chr3 (190-243)||(2128331-2128384)
chr3 (94-135)||(11039324-11039365)
chr3 (98-135)||(31010446-31010483)
chr3 (190-227)||(38462234-38462271)
chr3 (94-135)||(42817207-42817248)
chr3 (190-227)||(44284138-44284175)
chr3 (106-227)||(45432936-45433056)
chr3 (97-129)||(1217788-1217820)
chr3 (97-129)||(1810027-1810059)
chr3 (190-222)||(13481253-13481285)
chr3 (195-227)||(20267108-20267140)
chr3 (189-229)||(42808930-42808970)
chr3 (93-145)||(51206482-51206534)
[»] chr4 (36 HSPs)
chr4 (116-237)||(49219082-49219202)
chr4 (106-226)||(11802488-11802607)
chr4 (184-227)||(20105907-20105950)
chr4 (158-241)||(30207620-30207701)
chr4 (91-222)||(52746822-52746952)
chr4 (113-227)||(17884021-17884134)
chr4 (94-227)||(24929446-24929578)
chr4 (94-222)||(2996531-2996658)
chr4 (94-145)||(4691882-4691933)
chr4 (190-237)||(54327529-54327576)
chr4 (191-241)||(2169967-2170017)
chr4 (108-209)||(7694009-7694109)
chr4 (195-243)||(51044544-51044592)
chr4 (189-224)||(3662304-3662339)
chr4 (190-241)||(5131312-5131363)
chr4 (96-135)||(19304970-19305009)
chr4 (156-227)||(24443991-24444061)
chr4 (94-141)||(46415777-46415824)
chr4 (189-244)||(52645828-52645883)
chr4 (99-241)||(6466036-6466177)
chr4 (196-280)||(19422312-19422402)
chr4 (98-176)||(29263373-29263451)
chr4 (157-223)||(43372017-43372082)
chr4 (189-227)||(52926181-52926219)
chr4 (103-169)||(55547038-55547104)
chr4 (190-227)||(20936082-20936119)
chr4 (190-227)||(23815323-23815360)
chr4 (204-241)||(24936249-24936286)
chr4 (94-135)||(25583636-25583677)
chr4 (190-227)||(54325117-54325154)
chr4 (158-223)||(55870390-55870454)
chr4 (94-122)||(2874609-2874637)
chr4 (190-241)||(4191678-4191730)
chr4 (94-122)||(4243623-4243651)
chr4 (94-126)||(6428071-6428103)
chr4 (189-229)||(56007637-56007677)
[»] chr1 (57 HSPs)
chr1 (97-227)||(28689440-28689571)
chr1 (98-223)||(30371105-30371229)
chr1 (190-243)||(15360831-15360884)
chr1 (94-227)||(15437916-15438048)
chr1 (96-241)||(29007703-29007847)
chr1 (96-243)||(49517007-49517144)
chr1 (105-227)||(10199404-10199525)
chr1 (112-182)||(39347970-39348040)
chr1 (112-217)||(5592688-5592792)
chr1 (92-141)||(7761594-7761643)
chr1 (96-145)||(15579516-15579565)
chr1 (174-227)||(15687138-15687190)
chr1 (106-227)||(25479534-25479654)
chr1 (158-223)||(28467356-28467420)
chr1 (194-227)||(30259571-30259604)
chr1 (101-170)||(37593676-37593745)
chr1 (94-135)||(45327624-45327665)
chr1 (154-243)||(48830121-48830209)
chr1 (94-134)||(17628644-17628684)
chr1 (97-145)||(27140512-27140560)
chr1 (94-130)||(30418167-30418203)
chr1 (191-227)||(35080151-35080187)
chr1 (190-241)||(7274019-7274070)
chr1 (93-160)||(11695880-11695947)
chr1 (190-241)||(15799643-15799694)
chr1 (99-145)||(3224457-3224503)
chr1 (97-135)||(15064823-15064861)
chr1 (94-168)||(26461926-26462000)
chr1 (157-227)||(27738228-27738297)
chr1 (97-135)||(35350684-35350722)
chr1 (161-227)||(48064262-48064327)
chr1 (96-129)||(2234788-2234821)
chr1 (94-227)||(3924577-3924709)
chr1 (96-145)||(4549264-4549313)
chr1 (189-226)||(6265048-6265085)
chr1 (190-227)||(14737785-14737822)
chr1 (94-123)||(17631087-17631116)
chr1 (190-227)||(17631181-17631218)
chr1 (94-123)||(19412582-19412611)
chr1 (192-241)||(23895275-23895324)
chr1 (99-140)||(24968406-24968447)
chr1 (99-140)||(25432250-25432291)
chr1 (94-135)||(27145965-27146006)
chr1 (190-243)||(44032079-44032132)
chr1 (190-242)||(4338587-4338639)
chr1 (190-238)||(6031559-6031607)
chr1 (156-212)||(10581124-10581179)
chr1 (105-145)||(12477283-12477323)
chr1 (189-241)||(15488893-15488945)
chr1 (157-241)||(17269189-17269272)
chr1 (189-221)||(21002112-21002144)
chr1 (100-176)||(27963361-27963437)
chr1 (94-126)||(29045897-29045929)
chr1 (190-242)||(36151585-36151637)
chr1 (197-241)||(36641814-36641858)
chr1 (101-145)||(46252674-46252718)
chr1 (197-225)||(52559915-52559943)
[»] scaffold0024 (1 HSPs)
scaffold0024 (94-241)||(27515-27661)
[»] scaffold0147 (1 HSPs)
scaffold0147 (94-135)||(12689-12730)
[»] scaffold0012 (1 HSPs)
scaffold0012 (94-130)||(38641-38677)
[»] scaffold0311 (1 HSPs)
scaffold0311 (94-145)||(10602-10653)
[»] scaffold0590 (1 HSPs)
scaffold0590 (195-241)||(1159-1205)
[»] scaffold0275 (1 HSPs)
scaffold0275 (195-241)||(2770-2816)
[»] scaffold0103 (1 HSPs)
scaffold0103 (190-240)||(51508-51558)
[»] scaffold0508 (1 HSPs)
scaffold0508 (197-241)||(9862-9906)
[»] scaffold0286 (1 HSPs)
scaffold0286 (92-176)||(16113-16197)


Alignment Details
Target: chr7 (Bit Score: 406; Significance: 0; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 406; E-Value: 0
Query Start/End: Original strand, 19 - 440
Target Start/End: Complemental strand, 9873032 - 9872611
Alignment:
Q  19 aaaacatggtatgtttggattattatttttaagcatatctactcaaataagccatttttagaatattagcttctatatggaaacaacttatgacatgtcc 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9873032 aaaacatggtatgtttggattattatttttaagcatatctactcaaataagccatttttagaatattagcttctatatggaaacaacttatgacatgtcc 9872933  T
Q  119 ataagttgtttccagctcattttcatattctttgcagaatagcttatgaaatcaacttgtagctcatacgaaaaacagtttgactttattttatattttg 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9872932 ataagttgtttccagctcattttcatattctttgcagaatagcttatgaaatcaacttgtagctcatacgaaaaacagtttgactttattttatattttg 9872833  T
Q  219 ttatagaaacaacatatacataaactataatcgcgcttaattaagctgtttattcaaacatgacactaaaacaacaaaattgaacaagttatgaacccga 318  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9872832 ttatagaaacaacatatacataaactataatcacgcttaattaagctgtttattcaaacatgacactaaaacaacaaaattgaacaagttatgaacccga 9872733  T
Q  319 aacaaacaacttcaattcatatacctgctgcattgttggcagaacctctgctgcttacctccaaccaacacaacaggagttttggaatgcttttcgcaca 418  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9872732 aacaaacaacttgaattcatatacctgctgcattgttggcagaacctctgctgcttacctccaaccaacacaacaggagttttggaatgcttttcgcaca 9872633  T
Q  419 ccctatgacgcctatgctactc 440  Q
    ||||||||||| |||| |||||    
T  9872632 ccctatgacgcttatgatactc 9872611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 99 - 165
Target Start/End: Original strand, 47134747 - 47134813
Alignment:
Q  99 aaacaacttatgacatgtccataagttgtttccagctcattttcatattctttgcagaatagcttat 165  Q
    ||||||||||||||| ||||||||||||||| ||||| |||||||||  ||||  ||||||||||||    
T  47134747 aaacaacttatgacacgtccataagttgttttcagcttattttcataagctttcaagaatagcttat 47134813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 94 - 227
Target Start/End: Complemental strand, 46082121 - 46081986
Alignment:
Q  94 tatggaaacaacttatgacatgtccataagttgtttccagctcattttcatattctttgcagaatagc--ttatgaaatcaacttgtagctcatacgaaa 191  Q
    |||| ||||||||||||||||| ||||||||||||| ||||| |||||||||  || | |||||||||   ||||||| |||||| || || ||| | ||    
T  46082121 tatgaaaacaacttatgacatgaccataagttgttttcagcttattttcataagctctccagaatagcgtctatgaaaacaacttataacttatatg-aa 46082023  T
Q  192 aacag-tttgactttattttatattttgttatagaaa 227  Q
    ||||| ||||||||| |||||  ||| ||||||||||    
T  46082022 aacagttttgactttgttttaactttcgttatagaaa 46081986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 98 - 243
Target Start/End: Original strand, 48157109 - 48157253
Alignment:
Q  98 gaaacaacttatgacatgtccataagttgtttccagctcattttcatattctttgcagaatagcttatgaaatcaacttgtagctcatacgaaaaacagt 197  Q
    ||||||||||||| |||||||||||| ||||| ||||| |||| ||||   | | | ||||||||| ||||| ||| || ||||| |||   |||||| |    
T  48157109 gaaacaacttatgccatgtccataagctgttttcagcttatttccataagatctcccgaatagcttgtgaaaacaaattatagcttata-ttaaaacaat 48157207  T
Q  198 ttgactttattttatattttgttatagaaacaacatatacataaac 243  Q
    || |||||||||||| |||| ||||||||| ||  |||||||||||    
T  48157208 ttcactttattttatcttttattatagaaataagttatacataaac 48157253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 106 - 222
Target Start/End: Original strand, 44151477 - 44151592
Alignment:
Q  106 ttatgacatgtccataagttgtttccagctcattttcatattctttgcagaatagcttatgaaatcaacttgtagctcatacgaaaaacagtttgacttt 205  Q
    |||||||||||||||||| ||||| ||||| |||| ||||  |||| ||  |||| |||||||| |||||| ||||| ||| |  ||||||||| |||||    
T  44151477 ttatgacatgtccataagatgttttcagcttatttccataagcttttcaagatagtttatgaaaacaacttatagcttatatg-gaaacagttttacttt 44151575  T
Q  206 attttatattttgttat 222  Q
    ||| ||| |||||||||    
T  44151576 attctatcttttgttat 44151592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 94 - 182
Target Start/End: Original strand, 46104552 - 46104640
Alignment:
Q  94 tatggaaacaacttatgacatgtccataagttgtttccagctcattttcatattctttgcagaatagcttatgaaatcaacttgtagct 182  Q
    |||| |||||||| |||||||||| ||||  ||||||||||| |||||||||  || | ||| ||||||||||||| |||||| |||||    
T  46104552 tatgaaaacaactcatgacatgtcaataaaatgtttccagcttattttcataagctcttcagcatagcttatgaaaacaacttatagct 46104640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 94 - 243
Target Start/End: Complemental strand, 30496790 - 30496641
Alignment:
Q  94 tatggaaacaacttatgacatgtccataagttgtttccagctcattttca-tattctttgcagaatagcttatgaaatcaacttgtagctcatacgaaaa 192  Q
    |||| ||||| |||||| |||| || |||||||||| ||||| ||||||| ||  || | | | | || |||||||| |||| | ||| | |||||||||    
T  30496790 tatgaaaacagcttatggcatgcccgtaagttgttttcagcttattttcaataagctatccgggacagtttatgaaaacaacctataggttatacgaaaa 30496691  T
Q  193 acagtttgactttattttatattttgttatagaaacaacatatacataaac 243  Q
     || ||||||||||||||||||||||||||||||| |   |||||||||||    
T  30496690 -caatttgactttattttatattttgttatagaaatagtttatacataaac 30496641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 190 - 227
Target Start/End: Complemental strand, 3241431 - 3241394
Alignment:
Q  190 aaaacagtttgactttattttatattttgttatagaaa 227  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  3241431 aaaacagtttgactttattttttattttgttatagaaa 3241394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 190 - 223
Target Start/End: Original strand, 17989103 - 17989136
Alignment:
Q  190 aaaacagtttgactttattttatattttgttata 223  Q
    ||||||||||||||||||||||||||||||||||    
T  17989103 aaaacagtttgactttattttatattttgttata 17989136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 96 - 132
Target Start/End: Complemental strand, 3468697 - 3468661
Alignment:
Q  96 tggaaacaacttatgacatgtccataagttgtttcca 132  Q
    ||||||||||| |||||||||||||||||||||||||    
T  3468697 tggaaacaactaatgacatgtccataagttgtttcca 3468661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 39539769 - 39539813
Alignment:
Q  97 ggaaacaacttatgacatgtccataagttgtttccagctcatttt 141  Q
    ||||||||||||||||||||||||||| ||||| ||||| |||||    
T  39539769 ggaaacaacttatgacatgtccataagctgttttcagcttatttt 39539813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 188 - 227
Target Start/End: Complemental strand, 2999183 - 2999144
Alignment:
Q  188 gaaaaacagtttgactttattttatattttgttatagaaa 227  Q
    ||||||| ||||||||||||||||| ||||||||||||||    
T  2999183 gaaaaacggtttgactttattttatcttttgttatagaaa 2999144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 98 - 129
Target Start/End: Complemental strand, 8341909 - 8341878
Alignment:
Q  98 gaaacaacttatgacatgtccataagttgttt 129  Q
    ||||||||||||||||||||||||||||||||    
T  8341909 gaaacaacttatgacatgtccataagttgttt 8341878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 109 - 176
Target Start/End: Original strand, 24363601 - 24363668
Alignment:
Q  109 tgacatgtccataagttgtttccagctcattttcatattctttgcagaatagcttatgaaatcaactt 176  Q
    ||||||||||||||||||||| ||||| |||| ||||  || | ||| ||||||||||||| ||||||    
T  24363601 tgacatgtccataagttgttttcagcttatttccataacctctccaggatagcttatgaaaacaactt 24363668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 241
Target Start/End: Complemental strand, 28165081 - 28165030
Alignment:
Q  190 aaaacagtttgactttattttatattttgttatagaaacaacatatacataa 241  Q
    |||||| |||||||| ||||||| |||||||||||||| ||| |||||||||    
T  28165081 aaaacaatttgacttcattttatcttttgttatagaaagaacttatacataa 28165030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 129
Target Start/End: Complemental strand, 29290418 - 29290383
Alignment:
Q  94 tatggaaacaacttatgacatgtccataagttgttt 129  Q
    |||||||||||||||||||||||||||||| |||||    
T  29290418 tatggaaacaacttatgacatgtccataagctgttt 29290383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 129
Target Start/End: Original strand, 33645946 - 33645981
Alignment:
Q  94 tatggaaacaacttatgacatgtccataagttgttt 129  Q
    |||||||||||||||||||||||| |||||||||||    
T  33645946 tatggaaacaacttatgacatgtctataagttgttt 33645981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 129
Target Start/End: Complemental strand, 36537993 - 36537958
Alignment:
Q  94 tatggaaacaacttatgacatgtccataagttgttt 129  Q
    ||||||||||||||||||||||| ||||||||||||    
T  36537993 tatggaaacaacttatgacatgttcataagttgttt 36537958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 145
Target Start/End: Original strand, 39551533 - 39551584
Alignment:
Q  94 tatggaaacaacttatgacatgtccataagttgtttccagctcattttcata 145  Q
    |||||||||||||||||||||||||||||| ||||  ||||| |||| ||||    
T  39551533 tatggaaacaacttatgacatgtccataaggtgttgtcagcttatttccata 39551584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 129
Target Start/End: Original strand, 39568309 - 39568344
Alignment:
Q  94 tatggaaacaacttatgacatgtccataagttgttt 129  Q
    |||||||| |||||||||||||||||||||||||||    
T  39568309 tatggaaataacttatgacatgtccataagttgttt 39568344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 241
Target Start/End: Original strand, 45593799 - 45593850
Alignment:
Q  190 aaaacagtttgactttattttatattttgttatagaaacaacatatacataa 241  Q
    ||||||||||||||||||||||| |||||||| ||||| | | |||||||||    
T  45593799 aaaacagtttgactttattttatgttttgttacagaaatagcttatacataa 45593850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 190 - 224
Target Start/End: Original strand, 5006589 - 5006623
Alignment:
Q  190 aaaacagtttgactttattttatattttgttatag 224  Q
    ||||||||||||||||||||||| |||||||||||    
T  5006589 aaaacagtttgactttattttatcttttgttatag 5006623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 7244764 - 7244714
Alignment:
Q  95 atggaaacaacttatgacatgtccataagttgtttccagctcattttcata 145  Q
    |||||||||| ||||||||||  |||||||||||| ||||| |||||||||    
T  7244764 atggaaacaatttatgacatgctcataagttgttttcagcttattttcata 7244714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 94 - 140
Target Start/End: Original strand, 9423579 - 9423625
Alignment:
Q  94 tatggaaacaacttatgacatgtccataagttgtttccagctcattt 140  Q
    ||||||||||| ||||||||||| |||||||||||| ||||| ||||    
T  9423579 tatggaaacaatttatgacatgttcataagttgttttcagcttattt 9423625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 159 - 225
Target Start/End: Original strand, 9527140 - 9527205
Alignment:
Q  159 agcttatgaaatcaacttgtagctcatacgaaaaacagtttgactttattttatattttgttataga 225  Q
    ||||||||||| |||||| ||| | ||| ||||| ||||||||||||||| ||| ||||||||||||    
T  9527140 agcttatgaaaacaacttatagtttatatgaaaa-cagtttgactttattatatcttttgttataga 9527205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 93 - 127
Target Start/End: Complemental strand, 11208532 - 11208498
Alignment:
Q  93 atatggaaacaacttatgacatgtccataagttgt 127  Q
    |||| ||||||||||||||||||||||||||||||    
T  11208532 atatagaaacaacttatgacatgtccataagttgt 11208498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 94 - 140
Target Start/End: Complemental strand, 39360108 - 39360062
Alignment:
Q  94 tatggaaacaacttatgacatgtccataagttgtttccagctcattt 140  Q
    ||||||||||||||||||||| ||||||||||| || ||||| ||||    
T  39360108 tatggaaacaacttatgacatatccataagttgctttcagcttattt 39360062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 190 - 236
Target Start/End: Original strand, 39591547 - 39591593
Alignment:
Q  190 aaaacagtttgactttattttatattttgttatagaaacaacatata 236  Q
    |||||| |||||||||||||||| |||||||||||||| ||| ||||    
T  39591547 aaaacaatttgactttattttatcttttgttatagaaataacttata 39591593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 99 - 209
Target Start/End: Complemental strand, 44822039 - 44821930
Alignment:
Q  99 aaacaacttatgacatgtccataagttgtttccagctcattttcatattctttgcagaatagcttatgaaatcaacttgtagctcatacgaaaaacagtt 198  Q
    ||||||||||  | ||||| ||||||||||| || || |||||||||   | | ||||||||||||||||| || ||| || || |||| ||||||| ||    
T  44822039 aaacaacttaaaaaatgtcaataagttgttttcaacttattttcataagttctccagaatagcttatgaaaacagcttataacttatac-aaaaacaatt 44821941  T
Q  199 tgactttattt 209  Q
    |||||||||||    
T  44821940 tgactttattt 44821930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 227
Target Start/End: Original strand, 753288 - 753321
Alignment:
Q  194 cagtttgactttattttatattttgttatagaaa 227  Q
    |||||||||||||||| |||||||||||||||||    
T  753288 cagtttgactttatttcatattttgttatagaaa 753321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 123
Target Start/End: Complemental strand, 941625 - 941596
Alignment:
Q  94 tatggaaacaacttatgacatgtccataag 123  Q
    ||||||||||||||||||||||||||||||    
T  941625 tatggaaacaacttatgacatgtccataag 941596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 158 - 243
Target Start/End: Complemental strand, 1417285 - 1417201
Alignment:
Q  158 tagcttatgaaatcaacttgtagctcatacgaaaaacagtttgactttattttatattttgttatagaaacaacatatacataaac 243  Q
    |||||||||||| |||||| | ||| ||| ||||| || |||||||||||||||| |||||||||| ||| |   |||||||||||    
T  1417285 tagcttatgaaaacaacttattgcttatatgaaaa-caatttgactttattttatcttttgttatataaatagtttatacataaac 1417201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 143
Target Start/End: Complemental strand, 4001672 - 4001623
Alignment:
Q  94 tatggaaacaacttatgacatgtccataagttgtttccagctcattttca 143  Q
    |||||||||||||||||||||| | ||||||| ||| ||||| |||||||    
T  4001672 tatggaaacaacttatgacatgccaataagtttttttcagcttattttca 4001623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 200 - 241
Target Start/End: Complemental strand, 5373205 - 5373164
Alignment:
Q  200 gactttattttatattttgttatagaaacaacatatacataa 241  Q
    ||||||||||||| |||||||||||||| | |||||||||||    
T  5373205 gactttattttatcttttgttatagaaatagcatatacataa 5373164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 172
Target Start/End: Original strand, 6263358 - 6263426
Alignment:
Q  103 aacttatgacatgtccataagttgtttccagctcattttcatattctttgcagaatagcttatgaaatca 172  Q
    ||||||||| |||||||||||||||||  |||| |||| ||||| || | || |||||||||||||||||    
T  6263358 aacttatgagatgtccataagttgttt-tagcttatttccatatgctctccataatagcttatgaaatca 6263426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 143
Target Start/End: Complemental strand, 21248011 - 21247962
Alignment:
Q  94 tatggaaacaacttatgacatgtccataagttgtttccagctcattttca 143  Q
    |||||||| |||||||||||||| ||||||||||||  |||| |||||||    
T  21248011 tatggaaataacttatgacatgttcataagttgttttaagcttattttca 21247962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 143
Target Start/End: Complemental strand, 24967146 - 24967097
Alignment:
Q  94 tatggaaacaacttatgacatgtccataagttgtttccagctcattttca 143  Q
    |||||||||||||||| |||| |||| ||||||||| ||||| |||||||    
T  24967146 tatggaaacaacttataacatatccagaagttgttttcagcttattttca 24967097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 28520997 - 28521038
Alignment:
Q  94 tatggaaacaacttatgacatgtccataagttgtttccagct 135  Q
    |||||||||||||||||||||||| ||||| ||||| |||||    
T  28520997 tatggaaacaacttatgacatgtctataagctgttttcagct 28521038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 158 - 227
Target Start/End: Complemental strand, 47004108 - 47004040
Alignment:
Q  158 tagcttatgaaatcaacttgtagctcatacgaaaaacagtttgactttattttatattttgttatagaaa 227  Q
    |||||||||||| || ||| ||| |||||  ||||| |||||||||||||||||| | ||||||||||||    
T  47004108 tagcttatgaaaacagcttatagttcatat-aaaaatagtttgactttattttatctattgttatagaaa 47004040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 157 - 234
Target Start/End: Original strand, 47046156 - 47046232
Alignment:
Q  157 atagcttatgaaatcaacttgtagctcatacgaaaaacagtttgactttattttatattttgttatagaaacaacata 234  Q
    ||||||||||||| ||||| | |||| ||| ||||| || ||||||||||||||||  |||||| |||||| ||||||    
T  47046156 atagcttatgaaaacaactcggagcttatatgaaaa-caatttgactttattttatcctttgttgtagaaataacata 47046232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 197 - 242
Target Start/End: Complemental strand, 49060523 - 49060478
Alignment:
Q  197 tttgactttattttatattttgttatagaaacaacatatacataaa 242  Q
    |||||||||||||||| |||||||||||||| | | ||||||||||    
T  49060523 tttgactttattttattttttgttatagaaatagcttatacataaa 49060478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 197 - 237
Target Start/End: Complemental strand, 992053 - 992013
Alignment:
Q  197 tttgactttattttatattttgttatagaaacaacatatac 237  Q
    |||| ||||||||||| |||||||||||||||||| |||||    
T  992053 tttgtctttattttattttttgttatagaaacaacttatac 992013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 94 - 130
Target Start/End: Complemental strand, 6633949 - 6633913
Alignment:
Q  94 tatggaaacaacttatgacatgtccataagttgtttc 130  Q
    |||||||||||||||||| ||||||| ||||||||||    
T  6633949 tatggaaacaacttatgaaatgtccacaagttgtttc 6633913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 97 - 129
Target Start/End: Complemental strand, 28076636 - 28076604
Alignment:
Q  97 ggaaacaacttatgacatgtccataagttgttt 129  Q
    |||||||||| ||||||||||||||||||||||    
T  28076636 ggaaacaactaatgacatgtccataagttgttt 28076604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 189 - 241
Target Start/End: Complemental strand, 31341185 - 31341133
Alignment:
Q  189 aaaaacagtttgactttattttatattttgttatagaaacaacatatacataa 241  Q
    |||| ||||||||||||||||||| |||||||||| ||| | | |||||||||    
T  31341185 aaaaccagtttgactttattttatcttttgttatacaaatagcttatacataa 31341133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 195 - 243
Target Start/End: Original strand, 35808989 - 35809037
Alignment:
Q  195 agtttgactttattttatattttgttatagaaacaacatatacataaac 243  Q
    ||||||||| |||||||| |||||||||||||| | | |||||||||||    
T  35808989 agtttgactatattttatcttttgttatagaaatagcttatacataaac 35809037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 94 - 126
Target Start/End: Complemental strand, 39334278 - 39334246
Alignment:
Q  94 tatggaaacaacttatgacatgtccataagttg 126  Q
    ||||||||||| |||||||||||||||||||||    
T  39334278 tatggaaacaatttatgacatgtccataagttg 39334246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 4e-17; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 94 - 227
Target Start/End: Complemental strand, 2568743 - 2568610
Alignment:
Q  94 tatggaaacaacttatgacatgtccataagttgtttccagctcattttcatattctttgcagaatagcttatgaaatcaacttgtagctcatacgaaaaa 193  Q
    |||| ||||| |||||||||| | |||||||| |||  |||| ||||||||   || | ||  ||||||||||||| |||||| ||||| ||||||||||    
T  2568743 tatgaaaacagcttatgacatattcataagttatttttagcttattttcattagctctccatgatagcttatgaaaacaacttatagcttatacgaaaaa 2568644  T
Q  194 cagtttgactttattttatattttgttatagaaa 227  Q
    || ||| ||||| |||||||| ||||||||||||    
T  2568643 caatttaactttgttttatatcttgttatagaaa 2568610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 98 - 217
Target Start/End: Original strand, 10272420 - 10272538
Alignment:
Q  98 gaaacaacttatgacatgtccataagttgtttccagctcattttcatattctttgcagaatagcttatgaaatcaacttgtagctcatacgaaaaacagt 197  Q
    ||||||||||||||||||||  |||||||||| ||||| |||||||||  || | ||  || |||||||||| |||||| ||||| ||||| |||||| |    
T  10272420 gaaacaacttatgacatgtctgtaagttgttttcagcttattttcataaactctccaagatggcttatgaaaacaacttatagcttatacg-aaaacaat 10272518  T
Q  198 ttgactttattttatatttt 217  Q
    ||||||| ||||||| ||||    
T  10272519 ttgacttaattttatctttt 10272538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 98 - 241
Target Start/End: Original strand, 18704025 - 18704166
Alignment:
Q  98 gaaacaacttatgacatgtccataagttgtttccagctcattttcatat--tctttgcagaatagcttatgaaatcaacttgtagctcatacgaaaaaca 195  Q
    |||||||||||| ||||||| ||||||||||| ||||| |||| ||||   |||||| |  ||||||||||||| |||||| ||||| |||  ||||| |    
T  18704025 gaaacaacttataacatgtctataagttgttttcagcttatttccataagatctttgta--atagcttatgaaaacaacttatagcttatat-aaaaata 18704121  T
Q  196 gtttgactttattttatattttgttatagaaacaacatatacataa 241  Q
    | |||||||||||| || |||||||||||||| ||| |||||||||    
T  18704122 gcttgactttattt-atcttttgttatagaaataacttatacataa 18704166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 190 - 241
Target Start/End: Original strand, 29117010 - 29117061
Alignment:
Q  190 aaaacagtttgactttattttatattttgttatagaaacaacatatacataa 241  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||    
T  29117010 aaaacagtttgactttattttatcttttgttatagaaataacatatacataa 29117061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 94 - 227
Target Start/End: Complemental strand, 35960498 - 35960367
Alignment:
Q  94 tatggaaacaacttatgacatgtccataagttgtttccagctcattttcatattctttgcagaatagcttatgaaatcaacttgtagctcatacgaaaaa 193  Q
    ||||||| ||||||| |||||||||||||| |||||  |||| ||||   ||  |||| ||| |||||||||||||||||||| ||| | ||| |||| |    
T  35960498 tatggaagcaacttacgacatgtccataagatgtttttagcttatttctttacgctttccaggatagcttatgaaatcaacttatagtttatatgaaata 35960399  T
Q  194 cagtttgactttattttatattttgttatagaaa 227  Q
      ||||||||||||||||| |||| |||||||||    
T  35960398 --gtttgactttattttatcttttattatagaaa 35960367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 190 - 240
Target Start/End: Complemental strand, 985623 - 985573
Alignment:
Q  190 aaaacagtttgactttattttatattttgttatagaaacaacatatacata 240  Q
    ||||||||||||||||||||||| ||||||||| |||| ||||||||||||    
T  985623 aaaacagtttgactttattttatcttttgttatggaaataacatatacata 985573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 105 - 219
Target Start/End: Original strand, 18543193 - 18543306
Alignment:
Q  105 cttatgacatgtccataagttgtttccagctcattttcatattctttgcagaatagcttatgaaatcaacttgtagctcatacgaaaaacagtttgactt 204  Q
    |||||||||||||||| |||||||| ||||| |||| ||||  || | ||| ||||||||||||| |||||| || || |||  ||||  ||||||||||    
T  18543193 cttatgacatgtccatgagttgttttcagcttattt-cataagctctccaggatagcttatgaaaacaacttatatcttatataaaaacaagtttgactt 18543291  T
Q  205 tattttatattttgt 219  Q
    ||||| |||||||||    
T  18543292 tatttaatattttgt 18543306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 94 - 145
Target Start/End: Original strand, 11700363 - 11700414
Alignment:
Q  94 tatggaaacaacttatgacatgtccataagttgtttccagctcattttcata 145  Q
    |||||||||||||||||||||||||||||| ||||| ||| | |||||||||    
T  11700363 tatggaaacaacttatgacatgtccataagctgttttcagattattttcata 11700414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 110 - 227
Target Start/End: Original strand, 15074750 - 15074864
Alignment:
Q  110 gacatgtccataagttgtttccagctcattttcatattctttgcagaatagcttatgaaatcaacttgtagctcatacgaaaaacagtttgactttattt 209  Q
    |||||||||||||| ||||| ||||| |||| ||||  |||| ||| ||| ||||||||| |||||| ||||||||    |||||||||||| | ||||     
T  15074750 gacatgtccataagctgttttcagcttatttccataagctttccagtataacttatgaaaacaacttatagctcat---gaaaacagtttgattatattc 15074846  T
Q  210 tatattttgttatagaaa 227  Q
    ||| |||| |||||||||    
T  15074847 tatcttttattatagaaa 15074864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 157 - 227
Target Start/End: Complemental strand, 14295528 - 14295459
Alignment:
Q  157 atagcttatgaaatcaacttgtagctcatacgaaaaacagtttgactttattttatattttgttatagaaa 227  Q
    |||||||| |||| || ||| ||||| ||| ||||| ||||||||||||||||||| ||||||||||||||    
T  14295528 atagcttacgaaaacagcttatagcttatatgaaaa-cagtttgactttattttatcttttgttatagaaa 14295459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 18700469 - 18700428
Alignment:
Q  94 tatggaaacaacttatgacatgtccataagttgtttccagct 135  Q
    |||||||||||||||||||||||| ||||||||||| |||||    
T  18700469 tatggaaacaacttatgacatgtctataagttgttttcagct 18700428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 190 - 227
Target Start/End: Original strand, 28586846 - 28586883
Alignment:
Q  190 aaaacagtttgactttattttatattttgttatagaaa 227  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  28586846 aaaacagtttgactttattttatcttttgttatagaaa 28586883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 35135742 - 35135795
Alignment:
Q  190 aaaacagtttgactttattttatattttgttatagaaacaacatatacataaac 243  Q
    |||| |||||||||||||||||| |||||||||||||| | | |||||||||||    
T  35135742 aaaatagtttgactttattttatcttttgttatagaaatatcttatacataaac 35135795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 94 - 130
Target Start/End: Complemental strand, 11457183 - 11457147
Alignment:
Q  94 tatggaaacaacttatgacatgtccataagttgtttc 130  Q
    |||||||||||||||||||||||||||||| ||||||    
T  11457183 tatggaaacaacttatgacatgtccataagctgtttc 11457147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 159 - 223
Target Start/End: Original strand, 39823171 - 39823234
Alignment:
Q  159 agcttatgaaatcaacttgtagctcatacgaaaaacagtttgactttattttatattttgttata 223  Q
    ||||||||||| |||||||||||| ||| ||||   |||||||||||||||||| ||||||||||    
T  39823171 agcttatgaaaacaacttgtagcttatatgaaagt-agtttgactttattttatcttttgttata 39823234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 201 - 241
Target Start/End: Original strand, 40048371 - 40048411
Alignment:
Q  201 actttattttatattttgttatagaaacaacatatacataa 241  Q
    |||||||||||| |||||||||||||||||| |||||||||    
T  40048371 actttattttatcttttgttatagaaacaacttatacataa 40048411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 41957439 - 41957487
Alignment:
Q  97 ggaaacaacttatgacatgtccataagttgtttccagctcattttcata 145  Q
    ||||||| ||||||||||||||||||||||||| || || |||||||||    
T  41957439 ggaaacagcttatgacatgtccataagttgttttcatcttattttcata 41957487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 129
Target Start/End: Original strand, 38766530 - 38766565
Alignment:
Q  94 tatggaaacaacttatgacatgtccataagttgttt 129  Q
    |||||||||||||||||||| |||||||||||||||    
T  38766530 tatggaaacaacttatgacacgtccataagttgttt 38766565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 243
Target Start/End: Original strand, 912736 - 912782
Alignment:
Q  197 tttgactttattttatattttgttatagaaacaacatatacataaac 243  Q
    ||||||||||||||||||| ||||||||||| ||| ||| |||||||    
T  912736 tttgactttattttatattgtgttatagaaataacttattcataaac 912782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 8177518 - 8177568
Alignment:
Q  95 atggaaacaacttatgacatgtccataagttgtttccagctcattttcata 145  Q
    ||||||||| ||||||| ||||||||||||||||| ||| | |||||||||    
T  8177518 atggaaacagcttatgatatgtccataagttgttttcaggttattttcata 8177568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 191 - 241
Target Start/End: Original strand, 10280657 - 10280707
Alignment:
Q  191 aaacagtttgactttattttatattttgttatagaaacaacatatacataa 241  Q
    |||||||||||||||||| ||| |||||||||||||| | ||||| |||||    
T  10280657 aaacagtttgactttattctatcttttgttatagaaatagcatatgcataa 10280707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 108 - 227
Target Start/End: Complemental strand, 10303867 - 10303754
Alignment:
Q  108 atgacatgtccataagttgtttccagctcattttcatattctttgcagaatagcttatgaaatcaacttgtagctcatacgaaaaacagtttgactttat 207  Q
    |||||||||||||||||||||  ||||| |||||||||  |||| || ||   ||||||||| ||||||  || | | | ||||| || |||||||||||    
T  10303867 atgacatgtccataagttgttgtcagcttattttcataagctttccaaaa---cttatgaaaacaactt--aggttaaatgaaaa-caatttgactttat 10303774  T
Q  208 tttatattttgttatagaaa 227  Q
    ||||| ||||||||||||||    
T  10303773 tttatcttttgttatagaaa 10303754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 231
Target Start/End: Original strand, 32969204 - 32969238
Alignment:
Q  197 tttgactttattttatattttgttatagaaacaac 231  Q
    |||||||||||||||| ||||||||||||||||||    
T  32969204 tttgactttattttatcttttgttatagaaacaac 32969238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 241
Target Start/End: Original strand, 7096213 - 7096258
Alignment:
Q  196 gtttgactttattttatattttgttatagaaacaacatatacataa 241  Q
    ||||||||||||||||| |||||||||||||| | | |||||||||    
T  7096213 gtttgactttattttatcttttgttatagaaatagcttatacataa 7096258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 143
Target Start/End: Complemental strand, 7674733 - 7674684
Alignment:
Q  94 tatggaaacaacttatgacatgtccataagttgtttccagctcattttca 143  Q
    |||||||||||||||||||||||  ||||| ||||| ||||| |||||||    
T  7674733 tatggaaacaacttatgacatgtttataaggtgttttcagcttattttca 7674684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 131
Target Start/End: Complemental strand, 10152419 - 10152382
Alignment:
Q  94 tatggaaacaacttatgacatgtccataagttgtttcc 131  Q
    |||| ||||||||||||||||||||||||||| |||||    
T  10152419 tatgaaaacaacttatgacatgtccataagttttttcc 10152382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 227
Target Start/End: Complemental strand, 17368761 - 17368629
Alignment:
Q  94 tatggaaacaacttatgacatgtccataagttgtttccagctcattttcatattctttgcagaatagcttatgaaatcaacttgtagctcatacgaaaaa 193  Q
    |||| |||||||||||||||||| |||| |  |||| ||||| |||| ||||  || | ||  ||||||||||||| |||||| ||| | | || |||||    
T  17368761 tatgaaaacaacttatgacatgttcatatgcagttttcagcttatttccataacctctccaagatagcttatgaaaacaacttatagattacac-aaaaa 17368663  T
Q  194 cagtttgactttattttatattttgttatagaaa 227  Q
    ||||||||||| |||| ||| | |||||| ||||    
T  17368662 cagtttgacttcatttaatactgtgttattgaaa 17368629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 123
Target Start/End: Complemental strand, 32172738 - 32172709
Alignment:
Q  94 tatggaaacaacttatgacatgtccataag 123  Q
    ||||||||||||||||||||||||||||||    
T  32172738 tatggaaacaacttatgacatgtccataag 32172709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 227
Target Start/End: Original strand, 37063154 - 37063191
Alignment:
Q  190 aaaacagtttgactttattttatattttgttatagaaa 227  Q
    |||| |||||||||||||||||| ||||||||||||||    
T  37063154 aaaatagtttgactttattttatcttttgttatagaaa 37063191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 123
Target Start/End: Original strand, 38047864 - 38047893
Alignment:
Q  94 tatggaaacaacttatgacatgtccataag 123  Q
    ||||||||||||||||||||||||||||||    
T  38047864 tatggaaacaacttatgacatgtccataag 38047893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 123
Target Start/End: Original strand, 40499711 - 40499740
Alignment:
Q  94 tatggaaacaacttatgacatgtccataag 123  Q
    ||||||||||||||||||||||||||||||    
T  40499711 tatggaaacaacttatgacatgtccataag 40499740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 105 - 145
Target Start/End: Original strand, 10638531 - 10638571
Alignment:
Q  105 cttatgacatgtccataagttgtttccagctcattttcata 145  Q
    ||||||||||||||||||||||||| ||  |||||||||||    
T  10638531 cttatgacatgtccataagttgttttcaattcattttcata 10638571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 241
Target Start/End: Complemental strand, 12521539 - 12521490
Alignment:
Q  190 aaaacagtttgactttattttatattttgttatagaaacaacatatacataa 241  Q
    |||||||||||||| |||||||   ||||||||||||||||| |||||||||    
T  12521539 aaaacagtttgactctattttag--tttgttatagaaacaacttatacataa 12521490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 230
Target Start/End: Original strand, 12595820 - 12595860
Alignment:
Q  190 aaaacagtttgactttattttatattttgttatagaaacaa 230  Q
    |||||| ||| |||||||||||| |||||||||||||||||    
T  12595820 aaaacaatttaactttattttatcttttgttatagaaacaa 12595860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 226
Target Start/End: Complemental strand, 30585666 - 30585630
Alignment:
Q  190 aaaacagtttgactttattttatattttgttatagaa 226  Q
    ||||||| |||| ||||||||||||||||||||||||    
T  30585666 aaaacagattgaatttattttatattttgttatagaa 30585630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 31688025 - 31687993
Alignment:
Q  190 aaaacagtttgactttattttatattttgttat 222  Q
    ||||||||||||||||||||||| |||||||||    
T  31688025 aaaacagtttgactttattttatgttttgttat 31687993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 189 - 225
Target Start/End: Complemental strand, 31694509 - 31694473
Alignment:
Q  189 aaaaacagtttgactttattttatattttgttataga 225  Q
    |||||||||||||||||| ||||| ||||||||||||    
T  31694509 aaaaacagtttgactttagtttatgttttgttataga 31694473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 191 - 227
Target Start/End: Original strand, 35095864 - 35095900
Alignment:
Q  191 aaacagtttgactttattttatattttgttatagaaa 227  Q
    ||||| |||||||||||||||| ||||||||||||||    
T  35095864 aaacaatttgactttattttatcttttgttatagaaa 35095900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 94 - 210
Target Start/End: Complemental strand, 41016263 - 41016149
Alignment:
Q  94 tatggaaacaacttatgacatgtccataagttgtttccagctcattttcatattctttgcagaatagcttatgaaatcaacttgtagctcatacgaaaaa 193  Q
    ||||||||||||||||| |||||   | |||||||| ||||| |||||||||  |||| ||  || |||| ||||| |||||| ||||| ||| | ||||    
T  41016263 tatggaaacaacttatggcatgtttgtgagttgttt-cagcttattttcataagctttccatgatggcttgtgaaaacaacttatagcttatatg-aaaa 41016166  T
Q  194 cagtttgactttatttt 210  Q
    |||||||| ||||||||    
T  41016165 cagtttgaatttatttt 41016149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 2e-16; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 99 - 227
Target Start/End: Complemental strand, 4006794 - 4006667
Alignment:
Q  99 aaacaacttatgacatgtccataagttgtttccagctcattttcatattctttgcagaatagcttatgaaatcaacttgtagctcatacgaaaaacagtt 198  Q
    |||||||||| || ||||||||||||| ||| ||||| |||||||||  || |   | ||||||||||||| |||||| ||||| |||  ||||||| ||    
T  4006794 aaacaacttacgatatgtccataagttattttcagcttattttcataacctctcagggatagcttatgaaaacaacttatagcttatat-aaaaacaatt 4006696  T
Q  199 tgactttattttatattttgttatagaaa 227  Q
    ||||||||||||||  |||||||||||||    
T  4006695 tgactttattttatcatttgttatagaaa 4006667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 191 - 243
Target Start/End: Complemental strand, 32975967 - 32975915
Alignment:
Q  191 aaacagtttgactttattttatattttgttatagaaacaacatatacataaac 243  Q
    ||||||||||||||||||||||||||||||| ||||| ||| |||||||||||    
T  32975967 aaacagtttgactttattttatattttgttacagaaataacttatacataaac 32975915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 94 - 145
Target Start/End: Complemental strand, 9027663 - 9027612
Alignment:
Q  94 tatggaaacaacttatgacatgtccataagttgtttccagctcattttcata 145  Q
    |||||||| ||||||||||||||||||||||||||| ||||| |||||||||    
T  9027663 tatggaaataacttatgacatgtccataagttgttttcagcttattttcata 9027612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 188 - 227
Target Start/End: Complemental strand, 24774750 - 24774711
Alignment:
Q  188 gaaaaacagtttgactttattttatattttgttatagaaa 227  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  24774750 gaaaaacagtttgactttattttatattttgttatagaaa 24774711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 95 - 224
Target Start/End: Original strand, 281834 - 281962
Alignment:
Q  95 atggaaacaacttatgacatgtccataagttgtttccagctcattttcatattctttgcagaatagcttatgaaatcaacttgtagctcatacgaaaaac 194  Q
    |||||| |||||||||||||||| ||||||||||| ||||| |||| |||   || |  || ||||||||||||  || ||| ||||| ||| | |||||    
T  281834 atggaagcaacttatgacatgtctataagttgttttcagcttatttccatgagctctctaggatagcttatgaacacagcttatagcttatatg-aaaac 281932  T
Q  195 agtttgactttattttatattttgttatag 224  Q
    |  ||||||||||||||| |||||||||||    
T  281933 aagttgactttattttatcttttgttatag 281962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 96 - 236
Target Start/End: Complemental strand, 4246493 - 4246354
Alignment:
Q  96 tggaaacaacttatgacatgtccataagttgtttccagctcattttcatattctttgcagaatagcttatgaaatcaacttgtagctcatacgaaaaaca 195  Q
    ||||||||||| |||||||||||||||| ||||| || || ||||| |||| || | || |||||||||||||| || ||| ||| | ||| | ||||||    
T  4246493 tggaaacaactcatgacatgtccataagctgttttcaacttatttttatatgctctccataatagcttatgaaaacagcttatagattatatg-aaaaca 4246395  T
Q  196 gtttgactttattttatattttgttatagaaacaacatata 236  Q
       |||||| | ||||| |||| ||||||||||||| ||||    
T  4246394 tactgacttcaatttatcttttattatagaaacaacttata 4246354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 190 - 242
Target Start/End: Original strand, 24836279 - 24836331
Alignment:
Q  190 aaaacagtttgactttattttatattttgttatagaaacaacatatacataaa 242  Q
    |||||| |||||||||||||||| |||||||||||||| ||| ||||||||||    
T  24836279 aaaacaatttgactttattttatcttttgttatagaaataacttatacataaa 24836331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 93 - 145
Target Start/End: Original strand, 27909622 - 27909674
Alignment:
Q  93 atatggaaacaacttatgacatgtccataagttgtttccagctcattttcata 145  Q
    ||||||||||||  ||||||||||||||||||||||| ||||| |||| ||||    
T  27909622 atatggaaacaatatatgacatgtccataagttgttttcagcttatttccata 27909674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 94 - 166
Target Start/End: Complemental strand, 34939598 - 34939526
Alignment:
Q  94 tatggaaacaacttatgacatgtccataagttgtttccagctcattttcatattctttgcagaatagcttatg 166  Q
    |||||||||||||||||||| |||| |||||||||| ||||| |||| ||||  || | ||| ||||||||||    
T  34939598 tatggaaacaacttatgacacgtccgtaagttgttttcagcttatttccataacctcttcaggatagcttatg 34939526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 96 - 135
Target Start/End: Original strand, 2767736 - 2767775
Alignment:
Q  96 tggaaacaacttatgacatgtccataagttgtttccagct 135  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  2767736 tggaaacagcttatgacatgtccataagctgtttccagct 2767775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 191 - 226
Target Start/End: Complemental strand, 4420606 - 4420571
Alignment:
Q  191 aaacagtttgactttattttatattttgttatagaa 226  Q
    |||||||||||||||||||||| |||||||||||||    
T  4420606 aaacagtttgactttattttatcttttgttatagaa 4420571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 241
Target Start/End: Original strand, 10452440 - 10452491
Alignment:
Q  190 aaaacagtttgactttattttatattttgttatagaaacaacatatacataa 241  Q
    |||| ||||||| ||||||||||||||||||||||||| | | |||||||||    
T  10452440 aaaatagtttgattttattttatattttgttatagaaatagcttatacataa 10452491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 141
Target Start/End: Original strand, 10616526 - 10616573
Alignment:
Q  94 tatggaaacaacttatgacatgtccataagttgtttccagctcatttt 141  Q
    ||||||||||||||||||||||||| |||||||| | ||||| |||||    
T  10616526 tatggaaacaacttatgacatgtccgtaagttgtgttcagcttatttt 10616573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 241
Target Start/End: Original strand, 33068641 - 33068692
Alignment:
Q  190 aaaacagtttgactttattttatattttgttatagaaacaacatatacataa 241  Q
    ||||||||||||  ||||||||| |||||||||||||| ||| |||||||||    
T  33068641 aaaacagtttgatattattttatcttttgttatagaaataacttatacataa 33068692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 168
Target Start/End: Complemental strand, 34939826 - 34939755
Alignment:
Q  97 ggaaacaacttatgacatgtccataagttgtttccagctcattttcatattctttgcagaatagcttatgaa 168  Q
    ||||||| |||||||||||||||||| |||||| ||||| |||| ||||  || | ||| ||||||||||||    
T  34939826 ggaaacagcttatgacatgtccataaattgttttcagcttatttccataaactctccaggatagcttatgaa 34939755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 157 - 227
Target Start/End: Complemental strand, 1403018 - 1402949
Alignment:
Q  157 atagcttatgaaatcaacttgtagctcatacgaaaaacagtttgactttattttatattttgttatagaaa 227  Q
    ||||||||||||| ||| || ||||| ||| |||||  ||||| |||||||||||| ||||||||||||||    
T  1403018 atagcttatgaaaacaatttatagcttatatgaaaat-agtttaactttattttatcttttgttatagaaa 1402949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 94 - 140
Target Start/End: Original strand, 1669783 - 1669829
Alignment:
Q  94 tatggaaacaacttatgacatgtccataagttgtttccagctcattt 140  Q
    |||| ||||||||||||||||||| ||||| ||||| ||||||||||    
T  1669783 tatgaaaacaacttatgacatgtctataagctgttttcagctcattt 1669829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 159 - 241
Target Start/End: Complemental strand, 2514722 - 2514641
Alignment:
Q  159 agcttatgaaatcaacttgtagctcatacgaaaaacagtttgactttattttatattttgttatagaaacaacatatacataa 241  Q
    |||||||||||  ||||| |||||||||  ||||  |||||||||||||||||| |||| ||||||||| | | |||||||||    
T  2514722 agcttatgaaaataacttatagctcatat-aaaattagtttgactttattttatcttttattatagaaatagcttatacataa 2514641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 3528883 - 3528837
Alignment:
Q  99 aaacaacttatgacatgtccataagttgtttccagctcattttcata 145  Q
    |||||||||||||||||||||||| |||||| || || |||||||||    
T  3528883 aaacaacttatgacatgtccataacttgttttcatcttattttcata 3528837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 97 - 223
Target Start/End: Original strand, 9667973 - 9668098
Alignment:
Q  97 ggaaacaacttatgacatgtccataagttgtttccagctcattttcatattctttgcagaatagcttatgaaatcaacttgtagctcatacgaaaaacag 196  Q
    ||||||||||||||||||||||||||| ||||| || || |||| ||||  || | |  || || |||||||| ||| |||||||| ||| | ||||||     
T  9667973 ggaaacaacttatgacatgtccataagctgttttcaacttatttccataagctctccgaaacagtttatgaaaacaaattgtagcttatatg-aaaacaa 9668071  T
Q  197 tttgactttattttatattttgttata 223  Q
    || |||| ||| |||| ||||||||||    
T  9668072 ttcgactctatgttatcttttgttata 9668098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 193 - 227
Target Start/End: Complemental strand, 30865469 - 30865435
Alignment:
Q  193 acagtttgactttattttatattttgttatagaaa 227  Q
    |||||||||||||||||||| ||||||||||||||    
T  30865469 acagtttgactttattttatcttttgttatagaaa 30865435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 189 - 227
Target Start/End: Original strand, 35095006 - 35095044
Alignment:
Q  189 aaaaacagtttgactttattttatattttgttatagaaa 227  Q
    ||||||| |||||| ||||||||||||||||||||||||    
T  35095006 aaaaacaatttgacattattttatattttgttatagaaa 35095044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 198 - 227
Target Start/End: Complemental strand, 13360717 - 13360688
Alignment:
Q  198 ttgactttattttatattttgttatagaaa 227  Q
    ||||||||||||||||||||||||||||||    
T  13360717 ttgactttattttatattttgttatagaaa 13360688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 27894037 - 27893984
Alignment:
Q  190 aaaacagtttgactttattttatattttgttatagaaacaacatatacataaac 243  Q
    |||||| ||||||||||||||||||| |||| |||||| | | |||||||||||    
T  27894037 aaaacaatttgactttattttatattctgttgtagaaatagcttatacataaac 27893984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 157 - 230
Target Start/End: Original strand, 28621158 - 28621230
Alignment:
Q  157 atagcttatgaaatcaacttgtagctcatacgaaaaacagtttgactttattttatattttgttatagaaacaa 230  Q
    ||||| |||| || || ||||||||| |||| ||||||| ||| |||||||||||| |||||||||| ||||||    
T  28621158 atagcctatgtaaacatcttgtagcttatac-aaaaacaatttaactttattttatcttttgttataaaaacaa 28621230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 30863331 - 30863290
Alignment:
Q  94 tatggaaacaacttatgacatgtccataagttgtttccagct 135  Q
    |||| |||||||||||||||||| |||||||||||| |||||    
T  30863331 tatgaaaacaacttatgacatgtacataagttgttttcagct 30863290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 123
Target Start/End: Complemental strand, 32917282 - 32917253
Alignment:
Q  94 tatggaaacaacttatgacatgtccataag 123  Q
    ||||||||||||||||||||||||||||||    
T  32917282 tatggaaacaacttatgacatgtccataag 32917253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 92 - 176
Target Start/End: Original strand, 2160920 - 2161004
Alignment:
Q  92 tatatggaaacaacttatgacatgtccataagttgtttccagctcattttcatattctttgcagaatagcttatgaaatcaactt 176  Q
    ||||||| |||| |||| |||||||||||||||||||| || || |||| |||| ||||| ||  | |||||| |||| ||||||    
T  2160920 tatatgggaacaccttacgacatgtccataagttgttttcaacttatttccataatctttccaagacagcttaggaaaacaactt 2161004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 189 - 241
Target Start/End: Complemental strand, 6654606 - 6654554
Alignment:
Q  189 aaaaacagtttgactttattttatattttgttatagaaacaacatatacataa 241  Q
    ||||||| |||||||| |||||||  ||||||||||||| ||| |||||||||    
T  6654606 aaaaacaatttgacttaattttattatttgttatagaaataacttatacataa 6654554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 159 - 227
Target Start/End: Original strand, 9093606 - 9093673
Alignment:
Q  159 agcttatgaaatcaacttgtagctcatacgaaaaacagtttgactttattttatattttgttatagaaa 227  Q
    ||||||||||| || ||| ||||| ||||||||| || ||| |||||||||||| ||||| ||||||||    
T  9093606 agcttatgaaaacagcttatagcttatacgaaaa-caatttaactttattttatcttttgatatagaaa 9093673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 195 - 227
Target Start/End: Complemental strand, 30784542 - 30784510
Alignment:
Q  195 agtttgactttattttatattttgttatagaaa 227  Q
    |||||||||||||||||| ||||||||||||||    
T  30784542 agtttgactttattttatcttttgttatagaaa 30784510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 195 - 243
Target Start/End: Complemental strand, 32513809 - 32513762
Alignment:
Q  195 agtttgactttattttatattttgttatagaaacaacatatacataaac 243  Q
    |||||||||||||||||| |||||||||||||| ||| ||| |||||||    
T  32513809 agtttgactttattttat-ttttgttatagaaataacttatgcataaac 32513762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 191 - 243
Target Start/End: Original strand, 33500562 - 33500614
Alignment:
Q  191 aaacagtttgactttattttatattttgttatagaaacaacatatacataaac 243  Q
    ||||||||||| |||| ||||| |||||||||||||| | | |||||||||||    
T  33500562 aaacagtttgattttactttatcttttgttatagaaatagcttatacataaac 33500614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 33832258 - 33832310
Alignment:
Q  94 tatggaaacaacttatgacatgtccataagttgtttccagctcattttcatat 146  Q
    |||| ||||||||||||||||||  |||||||||||  |||| ||||||||||    
T  33832258 tatgaaaacaacttatgacatgtttataagttgtttttagcttattttcatat 33832310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 7e-16; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 92 - 231
Target Start/End: Complemental strand, 14666635 - 14666497
Alignment:
Q  92 tatatggaaacaacttatgacatgtccataagttgtttccagctcattttcatattctttgcagaatagcttatgaaatcaacttgtagctcatacgaaa 191  Q
    ||||||||||||||||||||||||| |||| ||||||| || || |||||||||  | |  ||  ||||||| ||||| |||||| || || ||| | ||    
T  14666635 tatatggaaacaacttatgacatgttcataggttgttttcaccttattttcataagcataccaagatagcttgtgaaaacaacttataacttatatg-aa 14666537  T
Q  192 aacagtttgactttattttatattttgttatagaaacaac 231  Q
    | ||||||||||||||||||| |||||||||  |||||||    
T  14666536 atcagtttgactttattttatcttttgttatcaaaacaac 14666497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 157 - 241
Target Start/End: Complemental strand, 10143194 - 10143111
Alignment:
Q  157 atagcttatgaaatcaacttgtagctcatacgaaaaacagtttgactttattttatattttgttatagaaacaacatatacataa 241  Q
    |||||||||||||  ||||| ||||| |||  |||||||||||||||| ||||||| |||||||||||||| ||| |||||||||    
T  10143194 atagcttatgaaaaaaacttatagcttatat-aaaaacagtttgacttaattttatcttttgttatagaaataacttatacataa 10143111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 100 - 227
Target Start/End: Original strand, 656768 - 656894
Alignment:
Q  100 aacaacttatgacatgtccataagttgtttccagctcattttcatattctttgcagaatagcttatgaaatcaacttgtagctcatacgaaaaacagttt 199  Q
    |||| ||||||||| | | |||||| |||| || || |||||||||  || ||||  ||||||||||||||||||||  |||| ||||| |||||| |||    
T  656768 aacagcttatgacacgcctataagtagttttcatcttattttcataagctctgcaagatagcttatgaaatcaacttacagcttatacg-aaaacaattt 656866  T
Q  200 gactttattttatattttgttatagaaa 227  Q
    || | |||||||| ||||||||||||||    
T  656867 gattatattttatcttttgttatagaaa 656894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 94 - 145
Target Start/End: Original strand, 44606095 - 44606146
Alignment:
Q  94 tatggaaacaacttatgacatgtccataagttgtttccagctcattttcata 145  Q
    |||| ||||||||||||||||||||||||||||||| ||||| |||||||||    
T  44606095 tatgaaaacaacttatgacatgtccataagttgttttcagctgattttcata 44606146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 157 - 227
Target Start/End: Original strand, 17952749 - 17952818
Alignment:
Q  157 atagcttatgaaatcaacttgtagctcatacgaaaaacagtttgactttattttatattttgttatagaaa 227  Q
    ||||||||||||| || ||||||||| ||| |||||  |||||||||||||||||| ||||||||||||||    
T  17952749 atagcttatgaaaacatcttgtagcttatatgaaaat-agtttgactttattttatcttttgttatagaaa 17952818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 100 - 236
Target Start/End: Original strand, 1939323 - 1939458
Alignment:
Q  100 aacaacttatgacatgtccataagttgtttccagctcattttcatattctttgcagaatagcttatgaaatcaacttgtagctc-atacgaaaaacagtt 198  Q
    |||||||||||||||||||||||| ||||| || || |||| ||||  || | ||| ||||||||||||| | | || |||||| ||| | |||| ||||    
T  1939323 aacaacttatgacatgtccataagctgttttcaacttatttccataagctctccagtatagcttatgaaaac-agttatagctcaatatg-aaaatagtt 1939420  T
Q  199 tgactttattttatattttgttatagaaacaacatata 236  Q
    | |||||||||||| |||||||||||||| ||| ||||    
T  1939421 tcactttattttatcttttgttatagaaataacttata 1939458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 94 - 129
Target Start/End: Original strand, 9878667 - 9878702
Alignment:
Q  94 tatggaaacaacttatgacatgtccataagttgttt 129  Q
    ||||||||||||||||||||||||||||||||||||    
T  9878667 tatggaaacaacttatgacatgtccataagttgttt 9878702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 157 - 236
Target Start/End: Original strand, 44439408 - 44439486
Alignment:
Q  157 atagcttatgaaatcaacttgtagctcatacgaaaaacagtttgactttattttatattttgttatagaaacaacatata 236  Q
    ||||||||| ||| ||| || ||||| |||| ||||||||||| |||||||||||||||||||||| |||| ||| ||||    
T  44439408 atagcttataaaaacaatttatagcttatac-aaaaacagtttaactttattttatattttgttatggaaataacttata 44439486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 94 - 132
Target Start/End: Complemental strand, 29936078 - 29936040
Alignment:
Q  94 tatggaaacaacttatgacatgtccataagttgtttcca 132  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  29936078 tatggaaacaacttaagacatgtccataagttgtttcca 29936040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 98 - 140
Target Start/End: Original strand, 30538162 - 30538204
Alignment:
Q  98 gaaacaacttatgacatgtccataagttgtttccagctcattt 140  Q
    |||||||||||||||||||||||||||||||| ||||| ||||    
T  30538162 gaaacaacttatgacatgtccataagttgttttcagcttattt 30538204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 191 - 241
Target Start/End: Original strand, 33576675 - 33576725
Alignment:
Q  191 aaacagtttgactttattttatattttgttatagaaacaacatatacataa 241  Q
    |||||||||||||||||| ||| |||||||||||||| ||| |||||||||    
T  33576675 aaacagtttgactttattgtatcttttgttatagaaataacctatacataa 33576725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 94 - 204
Target Start/End: Complemental strand, 40158803 - 40158694
Alignment:
Q  94 tatggaaacaacttatgacatgtccataagttgtttccagctcattttcatattctttgcagaatagcttatgaaatcaacttgtagctcatacgaaaaa 193  Q
    |||| ||||| ||||||||||||  ||||||||||| ||||| | || ||||  || | ||||||| ||||||||| |||||| | ||| ||||| ||||    
T  40158803 tatgaaaacagcttatgacatgtttataagttgttttcagcttaattacataagctctccagaataacttatgaaaacaacttattgcttatacg-aaaa 40158705  T
Q  194 cagtttgactt 204  Q
    |||||||||||    
T  40158704 cagtttgactt 40158694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 197 - 241
Target Start/End: Complemental strand, 5903284 - 5903240
Alignment:
Q  197 tttgactttattttatattttgttatagaaacaacatatacataa 241  Q
    ||||||||||||||||||||||||||||||| ||| ||| |||||    
T  5903284 tttgactttattttatattttgttatagaaataacgtatgcataa 5903240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 157 - 241
Target Start/End: Original strand, 28803554 - 28803637
Alignment:
Q  157 atagcttatgaaatcaacttgtagctcatacgaaaaacagtttgactttattttatattttgttatagaaacaacatatacataa 241  Q
    |||| ||| |||| |||||||||||| ||| ||||  ||||||||||||||||||| ||||||||| |||| ||| |||| ||||    
T  28803554 atagtttaagaaaacaacttgtagcttatatgaaat-cagtttgactttattttatcttttgttatcgaaataacttatatataa 28803637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 97 - 217
Target Start/End: Complemental strand, 43141953 - 43141834
Alignment:
Q  97 ggaaacaacttatgacatgtccataagttgtttccagctcattttcatattctttgcagaatagcttatgaaatcaacttgtagctcatacgaaaaacag 196  Q
    ||||||||||||||||||| ||||||||||||| ||  | |||| ||||  || | ||| ||||||||||||| || ||| ||||| ||| |  |||||     
T  43141953 ggaaacaacttatgacatgcccataagttgttttcattttatttccataaactcttcaggatagcttatgaaaacatcttatagcttatatg-gaaacaa 43141855  T
Q  197 tttgactttattttatatttt 217  Q
    |||||||||| ||||| ||||    
T  43141854 tttgactttactttatctttt 43141834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 129
Target Start/End: Original strand, 1160656 - 1160691
Alignment:
Q  94 tatggaaacaacttatgacatgtccataagttgttt 129  Q
    |||||||||||| |||||||||||||||||||||||    
T  1160656 tatggaaacaacctatgacatgtccataagttgttt 1160691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 241
Target Start/End: Complemental strand, 3673797 - 3673746
Alignment:
Q  190 aaaacagtttgactttattttatattttgttatagaaacaacatatacataa 241  Q
    |||||| ||| ||||||||||||||||||||||||||| |||  ||||||||    
T  3673797 aaaacaatttaactttattttatattttgttatagaaataactaatacataa 3673746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 157 - 212
Target Start/End: Original strand, 5043608 - 5043662
Alignment:
Q  157 atagcttatgaaatcaacttgtagctcatacgaaaaacagtttgactttattttat 212  Q
    ||||||||||||| |||||| ||||| ||| ||||| |||||||||||||||||||    
T  5043608 atagcttatgaaaacaacttctagcttatatgaaaa-cagtttgactttattttat 5043662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 145
Target Start/End: Complemental strand, 11063573 - 11063522
Alignment:
Q  94 tatggaaacaacttatgacatgtccataagttgtttccagctcattttcata 145  Q
    ||||||||||  ||||||||||||||||||||||||  |||| |||||||||    
T  11063573 tatggaaacatattatgacatgtccataagttgtttttagcttattttcata 11063522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 157 - 220
Target Start/End: Complemental strand, 11513920 - 11513858
Alignment:
Q  157 atagcttatgaaatcaacttgtagctcatacgaaaaacagtttgactttattttatattttgtt 220  Q
    ||||||||||||| |||||| ||||| ||| ||||| || |||||||||||||||| |||||||    
T  11513920 atagcttatgaaaacaacttatagcttatatgaaaa-caatttgactttattttatcttttgtt 11513858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 191 - 241
Target Start/End: Complemental strand, 27288622 - 27288572
Alignment:
Q  191 aaacagtttgactttattttatattttgttatagaaacaacatatacataa 241  Q
    ||||||||||| |||||||||| |||| ||||||||||||| | |||||||    
T  27288622 aaacagtttgattttattttatcttttattatagaaacaacttttacataa 27288572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 93 - 123
Target Start/End: Original strand, 28803514 - 28803544
Alignment:
Q  93 atatggaaacaacttatgacatgtccataag 123  Q
    |||||||||||||||||||||||||||||||    
T  28803514 atatggaaacaacttatgacatgtccataag 28803544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 191 - 241
Target Start/End: Original strand, 34054982 - 34055032
Alignment:
Q  191 aaacagtttgactttattttatattttgttatagaaacaacatatacataa 241  Q
    |||||||||| ||||||||||| |||||||||||||| | | |||||||||    
T  34054982 aaacagtttgcctttattttatcttttgttatagaaatagcctatacataa 34055032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 94 - 140
Target Start/End: Original strand, 43065435 - 43065481
Alignment:
Q  94 tatggaaacaacttatgacatgtccataagttgtttccagctcattt 140  Q
    |||| |||||||||||||||||||||||| |||||| ||||| ||||    
T  43065435 tatgaaaacaacttatgacatgtccataaattgttttcagcttattt 43065481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 227
Target Start/End: Original strand, 1742017 - 1742149
Alignment:
Q  94 tatggaaacaacttatgacatgtccataagttgtttccagctcattttcatattctttgcagaatagcttatgaaatcaacttgtagctcatacgaaaaa 193  Q
    ||||||||||||||||||||||| |||||| | | | || || |||| ||||  || | ||  |||| |||||||| || ||| || || |||  | |||    
T  1742017 tatggaaacaacttatgacatgtgcataagctatcttcaacttatttccataaactcttcatgatagattatgaaaacagcttatatcttatat-ataaa 1742115  T
Q  194 cagtttgactttattttatattttgttatagaaa 227  Q
     |||||||||| ||||||||||||||||||||||    
T  1742116 gagtttgacttcattttatattttgttatagaaa 1742149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 129
Target Start/End: Complemental strand, 7283079 - 7283046
Alignment:
Q  96 tggaaacaacttatgacatgtccataagttgttt 129  Q
    |||||||||||||||| |||||||||||||||||    
T  7283079 tggaaacaacttatgatatgtccataagttgttt 7283046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 15171240 - 15171187
Alignment:
Q  190 aaaacagtttgactttattttatattttgttatagaaacaacatatacataaac 243  Q
    |||||| |||||||||| ||||| || ||||||||||| ||| |||||||||||    
T  15171240 aaaacattttgactttaatttatcttctgttatagaaaaaacttatacataaac 15171187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 227
Target Start/End: Original strand, 32098388 - 32098425
Alignment:
Q  190 aaaacagtttgactttattttatattttgttatagaaa 227  Q
    |||||| |||||||||||||||| ||||||||||||||    
T  32098388 aaaacactttgactttattttatcttttgttatagaaa 32098425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 227
Target Start/End: Complemental strand, 33192183 - 33192146
Alignment:
Q  190 aaaacagtttgactttattttatattttgttatagaaa 227  Q
    ||||||||||||||||||||||| || |||||||||||    
T  33192183 aaaacagtttgactttattttatcttatgttatagaaa 33192146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 140
Target Start/End: Original strand, 33525953 - 33525998
Alignment:
Q  95 atggaaacaacttatgacatgtccataagttgtttccagctcattt 140  Q
    ||||||||||||||| |||||||||||||||| || ||||| ||||    
T  33525953 atggaaacaacttataacatgtccataagttggtttcagcttattt 33525998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 227
Target Start/End: Complemental strand, 37053584 - 37053547
Alignment:
Q  190 aaaacagtttgactttattttatattttgttatagaaa 227  Q
    ||||||||||||||||||||||| || |||||||||||    
T  37053584 aaaacagtttgactttattttattttctgttatagaaa 37053547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 129
Target Start/End: Original strand, 41809232 - 41809265
Alignment:
Q  96 tggaaacaacttatgacatgtccataagttgttt 129  Q
    ||||||||||||||||||||| ||||||||||||    
T  41809232 tggaaacaacttatgacatgttcataagttgttt 41809265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 189 - 241
Target Start/End: Complemental strand, 3102684 - 3102632
Alignment:
Q  189 aaaaacagtttgactttattttatattttgttatagaaacaacatatacataa 241  Q
    ||||| |||||||||||||||||||||||| |||| ||| | | |||||||||    
T  3102684 aaaaatagtttgactttattttatattttgctataaaaatagcttatacataa 3102632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 191 - 243
Target Start/End: Original strand, 5045238 - 5045290
Alignment:
Q  191 aaacagtttgactttattttatattttgttatagaaacaacatatacataaac 243  Q
    |||||| ||||||||||||||| |||||||||| ||| | | |||||||||||    
T  5045238 aaacagcttgactttattttatcttttgttataaaaatagcttatacataaac 5045290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 189 - 241
Target Start/End: Complemental strand, 5133763 - 5133711
Alignment:
Q  189 aaaaacagtttgactttattttatattttgttatagaaacaacatatacataa 241  Q
    |||||||||||  ||||||||||| |||||||||||||| | | |||||||||    
T  5133763 aaaaacagtttatctttattttatcttttgttatagaaatagcttatacataa 5133711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 238
Target Start/End: Complemental strand, 5511555 - 5511507
Alignment:
Q  190 aaaacagtttgactttattttatattttgttatagaaacaacatataca 238  Q
    |||| ||||||||||||||||||||||  ||||||||| ||| ||||||    
T  5511555 aaaaaagtttgactttattttatatttcattatagaaataacttataca 5511507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 94 - 209
Target Start/End: Original strand, 5759560 - 5759674
Alignment:
Q  94 tatggaaacaacttatgacatgtccataagttgt-ttccagctcattttcatattctttgcagaatagcttatgaaatcaacttgtagctcatacgaaaa 192  Q
    |||||||||| |||| |||||||||||||||||| || ||||| ||||||| |  |  | ||||||||||||||||| || ||| ||||  ||||| |||    
T  5759560 tatggaaacagctta-gacatgtccataagttgtgtttcagcttattttcacaaaccctccagaatagcttatgaaaacagcttatagcatatacg-aaa 5759657  T
Q  193 acagtttgactttattt 209  Q
    ||| || ||||||||||    
T  5759658 acatttagactttattt 5759674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 189 - 241
Target Start/End: Complemental strand, 9551570 - 9551518
Alignment:
Q  189 aaaaacagtttgactttattttatattttgttatagaaacaacatatacataa 241  Q
    ||||||||||||||||||||||||| ||| ||||| ||| | | |||||||||    
T  9551570 aaaaacagtttgactttattttataatttattataaaaatagcttatacataa 9551518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 96 - 176
Target Start/End: Original strand, 10563545 - 10563625
Alignment:
Q  96 tggaaacaacttatgacatgtccataagttgtttccagctcattttcatattctttgcagaatagcttatgaaatcaactt 176  Q
    |||||||| | ||||||||||||||||| | ||| ||||| |||||| ||  || | ||| ||||||||||||| ||||||    
T  10563545 tggaaacagcctatgacatgtccataagctattttcagcttattttcttaagctcttcagcatagcttatgaaaacaactt 10563625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 94 - 122
Target Start/End: Original strand, 11344755 - 11344783
Alignment:
Q  94 tatggaaacaacttatgacatgtccataa 122  Q
    |||||||||||||||||||||||||||||    
T  11344755 tatggaaacaacttatgacatgtccataa 11344783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 226
Target Start/End: Complemental strand, 33256730 - 33256694
Alignment:
Q  190 aaaacagtttgactttattttatattttgttatagaa 226  Q
    ||||||||||||||||||||||| | |||||||||||    
T  33256730 aaaacagtttgactttattttatctattgttatagaa 33256694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 99 - 135
Target Start/End: Complemental strand, 44269046 - 44269010
Alignment:
Q  99 aaacaacttatgacatgtccataagttgtttccagct 135  Q
    |||||||||||||||||||||||| |||||| |||||    
T  44269046 aaacaacttatgacatgtccataaattgttttcagct 44269010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 107 - 241
Target Start/End: Original strand, 28769337 - 28769470
Alignment:
Q  107 tatgacatgtccataagttgtttccagctcattttcatattctttgcagaatagcttatgaaatcaacttgtagctcatacgaaaaacagtttgacttta 206  Q
    ||||| ||||||||||||||||| ||||| |||| ||||  || | || |||||||||||||| || ||| ||||| ||| | |||| |||||||||| |    
T  28769337 tatgatatgtccataagttgttttcagcttatttccataaactctccaaaatagcttatgaaaacagcttatagcttataag-aaaatagtttgacttaa 28769435  T
Q  207 ttttatattttgttatagaaacaacatatacataa 241  Q
    ||||||| |||||||||| || | | |||||||||    
T  28769436 ttttatagtttgttataggaatagcttatacataa 28769470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 105 - 241
Target Start/End: Complemental strand, 11795166 - 11795031
Alignment:
Q  105 cttatgacatgtccataagttgtttccagctcattttcatattctttgcagaatagcttatgaaatcaacttgtagctcatacgaaaaacagtttgactt 204  Q
    ||||||||||||||||||  ||||| ||||| |||| ||||  || | || ||||||||||||||||| ||| || || ||| | |||||||| ||||||    
T  11795166 cttatgacatgtccataacctgttttcagcttatttccataagctctccataatagcttatgaaatcagcttataacttatatg-aaaacagtgtgactt 11795068  T
Q  205 tattttatattttgttatagaaacaacatatacataa 241  Q
    |||| ||| |||||| ||||||| | | |||||||||    
T  11795067 tattgtatgttttgtcatagaaaaagcttatacataa 11795031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 190 - 241
Target Start/End: Original strand, 5071047 - 5071098
Alignment:
Q  190 aaaacagtttgactttattttatattttgttatagaaacaacatatacataa 241  Q
    |||| |||||||||||||||||||||||  |||||||||||| |||||||||    
T  5071047 aaaaaagtttgactttattttatattttactatagaaacaacttatacataa 5071098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 94 - 169
Target Start/End: Original strand, 11569442 - 11569517
Alignment:
Q  94 tatggaaacaacttatgacatgtccataagttgtttccagctcattttcatattctttgcagaatagcttatgaaa 169  Q
    |||||||||| |||||||||||| |||||||||||| ||||| ||||||| | ||| | ||  |||||||||||||    
T  11569442 tatggaaacagcttatgacatgtacataagttgttttcagcttattttcaaaatctctccatgatagcttatgaaa 11569517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 94 - 145
Target Start/End: Original strand, 25869251 - 25869302
Alignment:
Q  94 tatggaaacaacttatgacatgtccataagttgtttccagctcattttcata 145  Q
    |||||||| ||||||||||||||||||||||||||| ||||| |||| ||||    
T  25869251 tatggaaataacttatgacatgtccataagttgttttcagcttatttccata 25869302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 189 - 227
Target Start/End: Original strand, 40728497 - 40728535
Alignment:
Q  189 aaaaacagtttgactttattttatattttgttatagaaa 227  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  40728497 aaaaacagtttgactttattttatcttttgttatagaaa 40728535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 190 - 227
Target Start/End: Complemental strand, 10437875 - 10437838
Alignment:
Q  190 aaaacagtttgactttattttatattttgttatagaaa 227  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  10437875 aaaacagtttgactttattttatcttttgttatagaaa 10437838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 94 - 143
Target Start/End: Original strand, 41620276 - 41620325
Alignment:
Q  94 tatggaaacaacttatgacatgtccataagttgtttccagctcattttca 143  Q
    ||||||||||| |||||||||||||||||||||||| | ||| |||||||    
T  41620276 tatggaaacaaattatgacatgtccataagttgttttccgcttattttca 41620325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 193 - 241
Target Start/End: Original strand, 11119082 - 11119130
Alignment:
Q  193 acagtttgactttattttatattttgttatagaaacaacatatacataa 241  Q
    |||||||||||||||||||| |||||||||||||| | | |||||||||    
T  11119082 acagtttgactttattttatcttttgttatagaaatatcgtatacataa 11119130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 189 - 241
Target Start/End: Original strand, 11188234 - 11188286
Alignment:
Q  189 aaaaacagtttgactttattttatattttgttatagaaacaacatatacataa 241  Q
    ||||| ||||||  |||||||||| |||||||||||||||||| |||||||||    
T  11188234 aaaaatagtttggttttattttatcttttgttatagaaacaacttatacataa 11188286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 94 - 154
Target Start/End: Original strand, 13000409 - 13000469
Alignment:
Q  94 tatggaaacaacttatgacatgtccataagttgtttccagctcattttcatattctttgca 154  Q
    ||||| |||||||||||||||||||| ||||||||| ||||| |||| ||||  |||||||    
T  13000409 tatggtaacaacttatgacatgtccacaagttgttttcagcttatttccataagctttgca 13000469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 195 - 234
Target Start/End: Complemental strand, 8799390 - 8799351
Alignment:
Q  195 agtttgactttattttatattttgttatagaaacaacata 234  Q
    |||||||||||||||||| |||||||||||||| ||||||    
T  8799390 agtttgactttattttatcttttgttatagaaataacata 8799351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 237
Target Start/End: Complemental strand, 26820189 - 26820142
Alignment:
Q  190 aaaacagtttgactttattttatattttgttatagaaacaacatatac 237  Q
    |||| |||||||||||||||||| |||||||||||||| ||| |||||    
T  26820189 aaaatagtttgactttattttatcttttgttatagaaataacttatac 26820142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 236
Target Start/End: Complemental strand, 31862575 - 31862437
Alignment:
Q  97 ggaaacaacttatgacatgtccataagttgtttccagctcattttcatattctttgcagaatagcttatgaaatcaacttgtagctcatacgaaaaacag 196  Q
    |||| ||||||||||| | | |||||| ||||| ||||| |||||||||  || |  || ||| ||||||||| || ||| ||||| |||||| ||  ||    
T  31862575 ggaagcaacttatgacctatgcataagctgttttcagcttattttcataagctctctaggataacttatgaaaacatcttatagcttatacgagaat-ag 31862477  T
Q  197 tttgactttattttatattttgttatagaaacaacatata 236  Q
    ||||||||||| |||| ||||||||| |||| ||| ||||    
T  31862476 tttgactttatattatcttttgttattgaaataacttata 31862437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 227
Target Start/End: Complemental strand, 35869860 - 35869790
Alignment:
Q  156 aatagcttatgaaatcaacttgtagctcatacgaaaaacagtttgactttattttatattttgttatagaaa 227  Q
    |||||||||||||| |||||| ||||| ||| |||||   |||||| |||||||||||||||||| ||||||    
T  35869860 aatagcttatgaaaacaacttatagcttatatgaaaatt-gtttgaatttattttatattttgttgtagaaa 35869790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 188 - 227
Target Start/End: Original strand, 39392739 - 39392778
Alignment:
Q  188 gaaaaacagtttgactttattttatattttgttatagaaa 227  Q
    |||| |||||||||||||||||||| ||||||||||||||    
T  39392739 gaaacacagtttgactttattttatcttttgttatagaaa 39392778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 99 - 182
Target Start/End: Complemental strand, 2091843 - 2091758
Alignment:
Q  99 aaacaacttatgacatgtccataagttgtttccagctcattttcatat--tctttgcagaatagcttatgaaatcaacttgtagct 182  Q
    ||||||||||||| || |||||||||||||| || || ||||  ||||  ||||  ||| ||||||||||||| ||||||||||||    
T  2091843 aaacaacttatgatatatccataagttgttttcaacttatttctatatgctcttcacaggatagcttatgaaaacaacttgtagct 2091758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 2594987 - 2595033
Alignment:
Q  99 aaacaacttatgacatgtccataagttgtttccagctcattttcata 145  Q
    |||||||||||||||||| |||||||||||| ||||| ||| |||||    
T  2594987 aaacaacttatgacatgttcataagttgttttcagcttattctcata 2595033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 189 - 227
Target Start/End: Complemental strand, 14482193 - 14482155
Alignment:
Q  189 aaaaacagtttgactttattttatattttgttatagaaa 227  Q
    ||||||| |||||||||||||||| ||||||||||||||    
T  14482193 aaaaacaatttgactttattttatcttttgttatagaaa 14482155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 189 - 223
Target Start/End: Complemental strand, 20672763 - 20672729
Alignment:
Q  189 aaaaacagtttgactttattttatattttgttata 223  Q
    |||||||||||||||||||||||| ||||||||||    
T  20672763 aaaaacagtttgactttattttatcttttgttata 20672729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 111 - 209
Target Start/End: Original strand, 26284797 - 26284894
Alignment:
Q  111 acatgtccataagttgtttccagctcattttcatattctttgcagaatagcttatgaaatcaacttgtagctcatacgaaaaacagtttgactttattt 209  Q
    ||||||| ||||||||||| ||||| |||||||||  || | ||| ||| |||| |||| |||||||||  | ||| | ||||||||||||||||||||    
T  26284797 acatgtctataagttgttttcagcttattttcataagctatacaggataacttacgaaaacaacttgtactttatatg-aaaacagtttgactttattt 26284894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 94 - 147
Target Start/End: Original strand, 32840970 - 32841024
Alignment:
Q  94 tatggaaacaacttatgacat-gtccataagttgtttccagctcattttcatatt 147  Q
    |||| |||||||||||||||| || |||||||||||| ||||| |||||||||||    
T  32840970 tatgaaaacaacttatgacattgttcataagttgttttcagcttattttcatatt 32841024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 227
Target Start/End: Complemental strand, 926508 - 926440
Alignment:
Q  159 agcttatgaaatcaacttgtagctcatacgaaaaacagttt-gactttattttatattttgttatagaaa 227  Q
    ||||||||||| |||||| ||| | |||| ||||||||||| ||||||||||||| || |||||||||||    
T  926508 agcttatgaaaacaacttatagataatac-aaaaacagttttgactttattttatcttgtgttatagaaa 926440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 143
Target Start/End: Original strand, 9540981 - 9541030
Alignment:
Q  94 tatggaaacaacttatgacatgtccataagttgtttccagctcattttca 143  Q
    |||||||||| |||||||||||||||||| |||| | ||||| |||||||    
T  9540981 tatggaaacatcttatgacatgtccataatttgtgttcagcttattttca 9541030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 227
Target Start/End: Original strand, 12291696 - 12291733
Alignment:
Q  190 aaaacagtttgactttattttatattttgttatagaaa 227  Q
    |||||||||||||||||| |||| ||||||||||||||    
T  12291696 aaaacagtttgactttatgttatcttttgttatagaaa 12291733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 140
Target Start/End: Original strand, 27158111 - 27158152
Alignment:
Q  99 aaacaacttatgacatgtccataagttgtttccagctcattt 140  Q
    |||||||||||||||  |||||||||||||| ||||||||||    
T  27158111 aaacaacttatgacacctccataagttgttttcagctcattt 27158152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 241
Target Start/End: Complemental strand, 29699242 - 29699193
Alignment:
Q  192 aacagtttgactttattttatattttgttatagaaacaacatatacataa 241  Q
    |||| |||||||||||||||| |||||||||||||| ||| | |||||||    
T  29699242 aacattttgactttattttatcttttgttatagaaataacttgtacataa 29699193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 123
Target Start/End: Original strand, 30987976 - 30988005
Alignment:
Q  94 tatggaaacaacttatgacatgtccataag 123  Q
    ||||||||||||||||||||||||||||||    
T  30987976 tatggaaacaacttatgacatgtccataag 30988005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 123
Target Start/End: Original strand, 31875580 - 31875609
Alignment:
Q  94 tatggaaacaacttatgacatgtccataag 123  Q
    ||||||||||||||||||||||||||||||    
T  31875580 tatggaaacaacttatgacatgtccataag 31875609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 189 - 229
Target Start/End: Original strand, 8066920 - 8066960
Alignment:
Q  189 aaaaacagtttgactttattttatattttgttatagaaaca 229  Q
    |||| ||||||||||||||||||| |||||||||| |||||    
T  8066920 aaaaccagtttgactttattttatcttttgttatataaaca 8066960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 229
Target Start/End: Complemental strand, 10218901 - 10218865
Alignment:
Q  193 acagtttgactttattttatattttgttatagaaaca 229  Q
    |||||||||||||||||||| ||||||||| ||||||    
T  10218901 acagtttgactttattttatcttttgttatggaaaca 10218865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 105 - 241
Target Start/End: Complemental strand, 12361266 - 12361131
Alignment:
Q  105 cttatgacatgtccataagttgtttccagctcattttcatattctttgcagaatagcttatgaaatcaacttgtagctcatacgaaaaacagtttgactt 204  Q
    ||||||||||||||||||| ||||| || || |||| |||   || | | ||||| ||||||||| || ||| ||||| ||| | |||||| ||||||||    
T  12361266 cttatgacatgtccataagctgttttcaacttatttccattagctctcctgaataacttatgaaaacagcttatagcttatatg-aaaacaatttgactt 12361168  T
Q  205 tattttatattttgttatagaaacaacatatacataa 241  Q
     ||||||| |||  ||||||||| ||| |||| ||||    
T  12361167 cattttatctttatttatagaaataacttatatataa 12361131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 94 - 122
Target Start/End: Original strand, 37740412 - 37740440
Alignment:
Q  94 tatggaaacaacttatgacatgtccataa 122  Q
    |||||||||||||||||||||||||||||    
T  37740412 tatggaaacaacttatgacatgtccataa 37740440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 103 - 135
Target Start/End: Complemental strand, 38421340 - 38421308
Alignment:
Q  103 aacttatgacatgtccataagttgtttccagct 135  Q
    ||||||||||||||||||||||||||| |||||    
T  38421340 aacttatgacatgtccataagttgttttcagct 38421308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 94 - 182
Target Start/End: Original strand, 39551194 - 39551282
Alignment:
Q  94 tatggaaacaacttatgacatgtccataagttgtttccagctcattttcatattctttgcagaatagcttatgaaatcaacttgtagct 182  Q
    |||||||||||||||||||||||||| ||| |||||  | || ||||| |||  || | ||| | ||||||||||| |||||| |||||    
T  39551194 tatggaaacaacttatgacatgtccaaaagctgtttttaacttatttttataagctctccaggaaagcttatgaaaacaacttatagct 39551282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 189 - 241
Target Start/End: Original strand, 42370440 - 42370492
Alignment:
Q  189 aaaaacagtttgactttattttatattttgttatagaaacaacatatacataa 241  Q
    ||||| |||||||||||| |||||||||||||| ||| ||| | |||||||||    
T  42370440 aaaaatagtttgactttactttatattttgttacagatacagcttatacataa 42370492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 93 - 223
Target Start/End: Complemental strand, 1816669 - 1816540
Alignment:
Q  93 atatggaaacaacttatgacatgtccataagttgtttccagctcattttcatattctttgcagaatagcttatgaaatcaacttgtagctcatacgaaaa 192  Q
    ||||| ||| |||||||||||| | |||| | ||||| ||||| ||||| |||  || | ||| ||||||||||||| |||||| || || |||| ||||    
T  1816669 atatgaaaataacttatgacattttcataggctgttttcagcttattttgataagctctccagtatagcttatgaaaacaacttatatcttatac-aaaa 1816571  T
Q  193 acagtttgactttattttatattttgttata 223  Q
    |||||||||||||||||||| |||| |||||    
T  1816570 acagtttgactttattttatcttttattata 1816540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 94 - 141
Target Start/End: Complemental strand, 41724297 - 41724250
Alignment:
Q  94 tatggaaacaacttatgacatgtccataagttgtttccagctcatttt 141  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||||    
T  41724297 tatggaaacaacttatgacatgtccataagttgttttcagcttatttt 41724250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 28306180 - 28306113
Alignment:
Q  157 atagcttatgaaatcaacttgtagctcatacgaaaaacagtttgactttattttatattttgttataga 225  Q
    ||||||||||||| ||||||||| || ||| ||||| ||||||||||||||||||  ||||||||||||    
T  28306180 atagcttatgaaaacaacttgtaacttatatgaaaa-cagtttgactttattttactttttgttataga 28306113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 94 - 225
Target Start/End: Original strand, 31337387 - 31337516
Alignment:
Q  94 tatggaaacaacttatgacatgtccataagttgtttccagctcattttcatattctttgcagaatagcttatgaaatcaacttgtagctcatacgaaaaa 193  Q
    |||||||||| || ||||||||||||| | ||||||| | || ||||| |||  ||||  ||| |||||||||||  |||||| || || |||  |||||    
T  31337387 tatggaaacagctaatgacatgtccatga-ttgtttctaccttattttgataagctttctagattagcttatgaatacaacttataacttatat-aaaaa 31337484  T
Q  194 cagtttgactttattttatattttgttataga 225  Q
    ||||||||||||||||||| ||||||| ||||    
T  31337485 cagtttgactttattttatcttttgttttaga 31337516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 94 - 129
Target Start/End: Complemental strand, 37273219 - 37273184
Alignment:
Q  94 tatggaaacaacttatgacatgtccataagttgttt 129  Q
    ||||||||||||||||||||||||||||||||||||    
T  37273219 tatggaaacaacttatgacatgtccataagttgttt 37273184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 94 - 145
Target Start/End: Complemental strand, 43115141 - 43115090
Alignment:
Q  94 tatggaaacaacttatgacatgtccataagttgtttccagctcattttcata 145  Q
    ||||||||||||||||||||||||||||| |||||| ||||| |||| ||||    
T  43115141 tatggaaacaacttatgacatgtccataacttgttttcagcttatttccata 43115090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 94 - 132
Target Start/End: Original strand, 14598538 - 14598576
Alignment:
Q  94 tatggaaacaacttatgacatgtccataagttgtttcca 132  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  14598538 tatggaaataacttatgacatgtccataagttgtttcca 14598576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 192 - 241
Target Start/End: Original strand, 8007777 - 8007826
Alignment:
Q  192 aacagtttgactttattttatattttgttatagaaacaacatatacataa 241  Q
    ||||||||||||||| ||||| |||||||||||||||| | |||||||||    
T  8007777 aacagtttgactttactttatcttttgttatagaaacagcttatacataa 8007826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 94 - 227
Target Start/End: Original strand, 24887269 - 24887400
Alignment:
Q  94 tatggaaacaacttatgacatgtccataagttgtttccagctcattttcatattctttgcagaatagcttatgaaatcaacttgtagctcatacgaaaaa 193  Q
    ||||||||||| ||||||||||||  ||| | |||| ||||| |||  ||||  || | ||| ||||||||||||| || ||| ||||| ||| ||| |     
T  24887269 tatggaaacaatttatgacatgtcattaact-gttttcagcttattcccataagctctccaggatagcttatgaaaacagcttttagcttatatgaata- 24887366  T
Q  194 cagtttgactttattttatattttgttatagaaa 227  Q
    ||||||||||||||||||| | ||||||||||||    
T  24887367 cagtttgactttattttatctattgttatagaaa 24887400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 99 - 140
Target Start/End: Complemental strand, 36200176 - 36200135
Alignment:
Q  99 aaacaacttatgacatgtccataagttgtttccagctcattt 140  Q
    ||||||||||||||||||||||||||||||| ||||| ||||    
T  36200176 aaacaacttatgacatgtccataagttgttttcagcttattt 36200135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 190 - 227
Target Start/End: Original strand, 49586996 - 49587033
Alignment:
Q  190 aaaacagtttgactttattttatattttgttatagaaa 227  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  49586996 aaaacagtttgactttattttatcttttgttatagaaa 49587033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 190 - 227
Target Start/End: Original strand, 51278237 - 51278274
Alignment:
Q  190 aaaacagtttgactttattttatattttgttatagaaa 227  Q
    |||||||||||||||||||| |||||||||||||||||    
T  51278237 aaaacagtttgactttatttaatattttgttatagaaa 51278274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 196 - 243
Target Start/End: Original strand, 24605102 - 24605149
Alignment:
Q  196 gtttgactttattttatattttgttatagaaacaacatatacataaac 243  Q
    |||||||||||||| || |||||||||||||| ||| |||||||||||    
T  24605102 gtttgactttatttcatcttttgttatagaaataacttatacataaac 24605149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 243
Target Start/End: Complemental strand, 37788883 - 37788798
Alignment:
Q  156 aatagcttatgaaatcaacttgtagctcatacgaaaaacagtttgactttattttatattttgttatagaaacaacatatacataaac 243  Q
    |||||||||||||| |||||| ||| | ||||| |||| | || ||||||||||||| |||||||||| ||| ||| |||||||||||    
T  37788883 aatagcttatgaaaacaacttatagattatacg-aaaataattggactttattttatcttttgttata-aaataacttatacataaac 37788798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 241
Target Start/End: Original strand, 40122832 - 40122883
Alignment:
Q  190 aaaacagtttgactttattttatattttgttatagaaacaacatatacataa 241  Q
    ||||||||||||||||||||||| ||||||||| |||| | | |||||||||    
T  40122832 aaaacagtttgactttattttatcttttgttattgaaatagcttatacataa 40122883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 241
Target Start/End: Original strand, 48364959 - 48365010
Alignment:
Q  190 aaaacagtttgactttattttatattttgttatagaaacaacatatacataa 241  Q
    |||||| |||||||||||||||| ||||||||| |||| ||| |||||||||    
T  48364959 aaaacaatttgactttattttatcttttgttatcgaaataacttatacataa 48365010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 227
Target Start/End: Original strand, 2606375 - 2606405
Alignment:
Q  197 tttgactttattttatattttgttatagaaa 227  Q
    |||||||||||||||||||||||||||||||    
T  2606375 tttgactttattttatattttgttatagaaa 2606405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 12985403 - 12985454
Alignment:
Q  190 aaaacagtttgactttattttatattttgttatagaaacaacatatacataaac 243  Q
    ||||||||||  |||||||||||  ||||||||||||||||| |||||||||||    
T  12985403 aaaacagtttatctttattttat--tttgttatagaaacaacttatacataaac 12985454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 227
Target Start/End: Complemental strand, 34318071 - 34318041
Alignment:
Q  197 tttgactttattttatattttgttatagaaa 227  Q
    |||||||||||||||||||||||||||||||    
T  34318071 tttgactttattttatattttgttatagaaa 34318041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 2128331 - 2128384
Alignment:
Q  190 aaaacagtttgactttattttatattttgttatagaaacaacatatacataaac 243  Q
    |||||| ||| |||||||||||| |||||||||||||| | | |||||||||||    
T  2128331 aaaacaatttaactttattttatcttttgttatagaaatagcttatacataaac 2128384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 11039324 - 11039365
Alignment:
Q  94 tatggaaacaacttatgacatgtccataagttgtttccagct 135  Q
    ||||||||||  |||||||||||||||||||||||| |||||    
T  11039324 tatggaaacatattatgacatgtccataagttgttttcagct 11039365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 135
Target Start/End: Complemental strand, 31010483 - 31010446
Alignment:
Q  98 gaaacaacttatgacatgtccataagttgtttccagct 135  Q
    |||||||||||||||||||||||||| ||||| |||||    
T  31010483 gaaacaacttatgacatgtccataagctgttttcagct 31010446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 227
Target Start/End: Complemental strand, 38462271 - 38462234
Alignment:
Q  190 aaaacagtttgactttattttatattttgttatagaaa 227  Q
    ||||||||||||||||||||||| ||||| ||||||||    
T  38462271 aaaacagtttgactttattttatcttttggtatagaaa 38462234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 42817207 - 42817248
Alignment:
Q  94 tatggaaacaacttatgacatgtccataagttgtttccagct 135  Q
    |||||||||| | ||||||||||||||||||||||| |||||    
T  42817207 tatggaaacagcatatgacatgtccataagttgttttcagct 42817248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 227
Target Start/End: Original strand, 44284138 - 44284175
Alignment:
Q  190 aaaacagtttgactttattttatattttgttatagaaa 227  Q
    |||||||||||||||| |||||| ||||||||||||||    
T  44284138 aaaacagtttgactttgttttattttttgttatagaaa 44284175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 227
Target Start/End: Original strand, 45432936 - 45433056
Alignment:
Q  106 ttatgacatgtccataagttgtttccagctcattttcatattctttgcagaatagcttatgaaatcaacttgtagctcatacgaaaaacagtttgacttt 205  Q
    ||||||||||| |||||||||||| ||||| |||| ||||  || | ||| ||  ||| ||||| ||| || ||||||||| | |||||| ||| ||||     
T  45432936 ttatgacatgttcataagttgttttcagcttatttccataagctctacaggatgacttgtgaaaacaatttatagctcatatg-aaaacaatttaacttc 45433034  T
Q  206 attttatattttgttatagaaa 227  Q
    ||||||| |||| |||||||||    
T  45433035 attttatcttttcttatagaaa 45433056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 97 - 129
Target Start/End: Original strand, 1217788 - 1217820
Alignment:
Q  97 ggaaacaacttatgacatgtccataagttgttt 129  Q
    ||||||| |||||||||||||||||||||||||    
T  1217788 ggaaacagcttatgacatgtccataagttgttt 1217820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 97 - 129
Target Start/End: Complemental strand, 1810059 - 1810027
Alignment:
Q  97 ggaaacaacttatgacatgtccataagttgttt 129  Q
    |||||||||||||||||||||||| ||||||||    
T  1810059 ggaaacaacttatgacatgtccatgagttgttt 1810027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 13481285 - 13481253
Alignment:
Q  190 aaaacagtttgactttattttatattttgttat 222  Q
    |||| ||||||||||||||||||||||||||||    
T  13481285 aaaatagtttgactttattttatattttgttat 13481253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 195 - 227
Target Start/End: Complemental strand, 20267140 - 20267108
Alignment:
Q  195 agtttgactttattttatattttgttatagaaa 227  Q
    |||||||||||||||||| ||||||||||||||    
T  20267140 agtttgactttattttatcttttgttatagaaa 20267108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 189 - 229
Target Start/End: Complemental strand, 42808970 - 42808930
Alignment:
Q  189 aaaaacagtttgactttattttatattttgttatagaaaca 229  Q
    ||||||| ||| |||||||||||| ||||||||||||||||    
T  42808970 aaaaacaatttaactttattttatcttttgttatagaaaca 42808930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 93 - 145
Target Start/End: Original strand, 51206482 - 51206534
Alignment:
Q  93 atatggaaacaacttatgacatgtccataagttgtttccagctcattttcata 145  Q
    ||||||||||| |||||||| | |||| ||||||||| ||||| |||||||||    
T  51206482 atatggaaacagcttatgacctatccaaaagttgttttcagcttattttcata 51206534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 116 - 237
Target Start/End: Complemental strand, 49219202 - 49219082
Alignment:
Q  116 tccataagttgtttccagctcattttcatattctttgcagaatagcttatgaaatcaacttgtagctcatacgaaaaacagtttgactttattttatatt 215  Q
    |||||||||||||| ||||| |||| |||| ||| |  |  |||| |||||||| |||||| ||||| ||| |||||  | |||||||||||||||||||    
T  49219202 tccataagttgttttcagcttatttccataatctctttaagatagtttatgaaaacaacttatagcttatatgaaaataa-tttgactttattttatatt 49219104  T
Q  216 ttgttatagaaacaacatatac 237  Q
    |||||||||||| ||| |||||    
T  49219103 ttgttatagaaataacttatac 49219082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 106 - 226
Target Start/End: Complemental strand, 11802607 - 11802488
Alignment:
Q  106 ttatgacatgtccataagttgtttccagctcattttcatattctttgcagaatagcttatgaaatcaacttgtagctcatacgaaaaacagtttgacttt 205  Q
    ||||| |||| ||||||| ||||| ||||| ||| |||||  || | || |||||||||||||| |||||||||||| ||  || ||| | |||||||||    
T  11802607 ttatggcatggccataagctgttttcagcttattctcataagctctccataatagcttatgaaaacaacttgtagcttatgtgagaaa-aatttgacttt 11802509  T
Q  206 attttatattttgttatagaa 226  Q
    ||||||| |||||||||||||    
T  11802508 attttatcttttgttatagaa 11802488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 184 - 227
Target Start/End: Original strand, 20105907 - 20105950
Alignment:
Q  184 atacgaaaaacagtttgactttattttatattttgttatagaaa 227  Q
    |||||||||||| |||||||||||||||||||||||||||||||    
T  20105907 atacgaaaaacaatttgactttattttatattttgttatagaaa 20105950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 158 - 241
Target Start/End: Original strand, 30207620 - 30207701
Alignment:
Q  158 tagcttatgaaatcaacttgtagctcatacgaaaaacagtttgactttattttatattttgttatagaaacaacatatacataa 241  Q
    |||||||||||| |||||| ||||| ||| ||||| |||||||| |||||||||| |||||||||||||  |||||||||||||    
T  30207620 tagcttatgaaaacaacttatagcttatatgaaaa-cagtttga-tttattttattttttgttatagaactaacatatacataa 30207701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 91 - 222
Target Start/End: Original strand, 52746822 - 52746952
Alignment:
Q  91 ctatatggaaacaacttatgacatgtccataagttgtttccagctcattttcatattctttgcagaatagcttatgaaatcaacttgtagctcatacgaa 190  Q
    ||||||||||||| |||| ||||||| |||||| ||||| ||||| |||||||||  | || ||  ||||||||||||| || ||| | ||| | || ||    
T  52746822 ctatatggaaacagcttaagacatgttcataagctgttttcagctgattttcataagccttacaagatagcttatgaaaacagcttatggcttacac-aa 52746920  T
Q  191 aaacagtttgactttattttatattttgttat 222  Q
    ||||| ||| |||||||||||| |||||||||    
T  52746921 aaacaatttaactttattttatcttttgttat 52746952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 113 - 227
Target Start/End: Complemental strand, 17884134 - 17884021
Alignment:
Q  113 atgtccataagttgtttccagctcattttcatattctttgcagaatagcttatgaaatcaacttgtagctcatacgaaaaacagtttgactttattttat 212  Q
    |||| |||||||||||| ||||| |||||||||  || | ||  ||||||||||||| |||||  || || |||| ||||||| ||| ||||||||||||    
T  17884134 atgttcataagttgttttcagctaattttcataagctctccaatatagcttatgaaaacaactgataacttatac-aaaaacaatttaactttattttat 17884036  T
Q  213 attttgttatagaaa 227  Q
     ||||||||||||||    
T  17884035 cttttgttatagaaa 17884021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 94 - 227
Target Start/End: Complemental strand, 24929578 - 24929446
Alignment:
Q  94 tatggaaacaacttatgacatgtccataagttgtttccagctcattttcatattctttgcagaatagcttatgaaatcaacttgtagctcatacgaaaaa 193  Q
    |||||||||| |||||| ||||| ||||| |||||| ||||| |||| ||||  || |  || | || |||||||| |||||| |||||  || |||||     
T  24929578 tatggaaacagcttatggcatgttcataaattgttttcagcttatttccataagctctctagtagagtttatgaaaacaacttatagcttttatgaaaa- 24929480  T
Q  194 cagtttgactttattttatattttgttatagaaa 227  Q
    ||||| ||||||||||||| ||||||||||||||    
T  24929479 cagttagactttattttatcttttgttatagaaa 24929446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 94 - 222
Target Start/End: Complemental strand, 2996658 - 2996531
Alignment:
Q  94 tatggaaacaacttatgacatgtccataagttgtttccagctcattttcatattctttgcagaatagcttatgaaatcaacttgtagctcatacgaaaaa 193  Q
    |||| ||||||||||||||||||||||||| | ||| || || |||||||||  || | ||  ||||||||||||| |||||| || || |||  |||||    
T  2996658 tatgaaaacaacttatgacatgtccataagcttttttcaacttattttcatacgctctccaagatagcttatgaaaacaacttataacttata-taaaaa 2996560  T
Q  194 cagtttgactttattttatattttgttat 222  Q
    || ||||||| |||||||| || ||||||    
T  2996559 caatttgactgtattttatcttatgttat 2996531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 94 - 145
Target Start/End: Complemental strand, 4691933 - 4691882
Alignment:
Q  94 tatggaaacaacttatgacatgtccataagttgtttccagctcattttcata 145  Q
    |||||||||||||||||||||| ||||| ||||||| ||||| |||||||||    
T  4691933 tatggaaacaacttatgacatgcccatatgttgttttcagcttattttcata 4691882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 190 - 237
Target Start/End: Original strand, 54327529 - 54327576
Alignment:
Q  190 aaaacagtttgactttattttatattttgttatagaaacaacatatac 237  Q
    |||||||||||||||| |||||| |||||||||||||||||| |||||    
T  54327529 aaaacagtttgactttgttttatcttttgttatagaaacaacttatac 54327576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 191 - 241
Target Start/End: Complemental strand, 2170017 - 2169967
Alignment:
Q  191 aaacagtttgactttattttatattttgttatagaaacaacatatacataa 241  Q
    ||||||||||||| |||||||| |||||||||||||||||  |||||||||    
T  2170017 aaacagtttgactctattttattttttgttatagaaacaatttatacataa 2169967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 108 - 209
Target Start/End: Original strand, 7694009 - 7694109
Alignment:
Q  108 atgacatgtccataagttgtttccagctcattttcatattctttgcagaatagcttatgaaatcaacttgtagctcatacgaaaaacagtttgactttat 207  Q
    ||||||||| |||||||||||| ||||| |||| ||||  || | ||| ||| ||||||||| || ||| ||||| |||| |||||||||||||||| ||    
T  7694009 atgacatgttcataagttgttttcagcttatttccataaactctccaggataacttatgaaaacagcttatagcttatac-aaaaacagtttgacttcat 7694107  T
Q  208 tt 209  Q
    ||    
T  7694108 tt 7694109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 195 - 243
Target Start/End: Original strand, 51044544 - 51044592
Alignment:
Q  195 agtttgactttattttatattttgttatagaaacaacatatacataaac 243  Q
    |||||||||||||||||| |||||||||||||| | | |||||||||||    
T  51044544 agtttgactttattttatcttttgttatagaaatagcttatacataaac 51044592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 189 - 224
Target Start/End: Complemental strand, 3662339 - 3662304
Alignment:
Q  189 aaaaacagtttgactttattttatattttgttatag 224  Q
    |||||||||||||||||||||||| |||||||||||    
T  3662339 aaaaacagtttgactttattttatcttttgttatag 3662304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 241
Target Start/End: Original strand, 5131312 - 5131363
Alignment:
Q  190 aaaacagtttgactttattttatattttgttatagaaacaacatatacataa 241  Q
    |||||| ||| |||||||||||| |||||||||| ||||||| |||||||||    
T  5131312 aaaacattttaactttattttatcttttgttatataaacaacttatacataa 5131363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 96 - 135
Target Start/End: Complemental strand, 19305009 - 19304970
Alignment:
Q  96 tggaaacaacttatgacatgtccataagttgtttccagct 135  Q
    |||||||| ||||||||||||||||||||||||| |||||    
T  19305009 tggaaacagcttatgacatgtccataagttgttttcagct 19304970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 227
Target Start/End: Complemental strand, 24444061 - 24443991
Alignment:
Q  156 aatagcttatgaaatcaacttgtagctcatacgaaaaacagtttgactttattttatattttgttatagaaa 227  Q
    |||||||||||||| |||||| ||||| ||| |||||   |||||| |||||||||||||||||| ||||||    
T  24444061 aatagcttatgaaaacaacttatagcttatatgaaaatt-gtttgaatttattttatattttgttgtagaaa 24443991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 141
Target Start/End: Original strand, 46415777 - 46415824
Alignment:
Q  94 tatggaaacaacttatgacatgtccataagttgtttccagctcatttt 141  Q
    |||| ||||||| ||||||||||||||||||||||| ||||| |||||    
T  46415777 tatgcaaacaacctatgacatgtccataagttgttttcagctaatttt 46415824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 189 - 244
Target Start/End: Original strand, 52645828 - 52645883
Alignment:
Q  189 aaaaacagtttgactttattttatattttgttatagaaacaacatatacataaact 244  Q
    ||||||||||||| || ||||||| |||||||||||||| | | ||||||||||||    
T  52645828 aaaaacagtttgaattgattttatcttttgttatagaaatagcttatacataaact 52645883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 99 - 241
Target Start/End: Original strand, 6466036 - 6466177
Alignment:
Q  99 aaacaacttatgacatgtccataagttgtttccagctcattttcatattctttgcagaatagcttatgaaatcaacttgtagctcatacgaaaaacagtt 198  Q
    ||||||||||||| |||| |||||| | ||| || || |||| |||| ||| |  ||||||||||||| || |||||| ||| | |||| ||||| | ||    
T  6466036 aaacaacttatgagatgttcataagctattttcaacttatttccataatctctctagaatagcttatggaaacaacttatagattatac-aaaaagaatt 6466134  T
Q  199 tgactttattttatattttgttatagaaacaacatatacataa 241  Q
    | ||||||||| || || ||||||| ||||||| ||| |||||    
T  6466135 tcactttatttgatcttgtgttatataaacaacttattcataa 6466177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 196 - 280
Target Start/End: Complemental strand, 19422402 - 19422312
Alignment:
Q  196 gtttgactttattttatattttgttatagaaacaacatatacataaac-----tataat-cgcgcttaattaagctgtttattcaaacatg 280  Q
    ||||||||||||| ||| |||||||||||||| ||| ||||||||| |     ||| ||  ||||||||||||||||||||| ||||||||    
T  19422402 gtttgactttattatatcttttgttatagaaataacttatacataagcatttatatgataagcgcttaattaagctgtttatccaaacatg 19422312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 98 - 176
Target Start/End: Complemental strand, 29263451 - 29263373
Alignment:
Q  98 gaaacaacttatgacatgtccataagttgtttccagctcattttcatattctttgcagaatagcttatgaaatcaactt 176  Q
    |||||| ||||||| |||| |||||||||||| ||||| |||| || |  || ||||| ||||||||||||| ||||||    
T  29263451 gaaacagcttatgatatgttcataagttgttttcagcttatttccacaagctctgcaggatagcttatgaaaacaactt 29263373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 157 - 223
Target Start/End: Original strand, 43372017 - 43372082
Alignment:
Q  157 atagcttatgaaatcaacttgtagctcatacgaaaaacagtttgactttattttatattttgttata 223  Q
    ||||||||||||||||  || ||||| |||  ||||||||||||||| |||||||| ||||||||||    
T  43372017 atagcttatgaaatcagtttatagcttatat-aaaaacagtttgactgtattttatcttttgttata 43372082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 189 - 227
Target Start/End: Complemental strand, 52926219 - 52926181
Alignment:
Q  189 aaaaacagtttgactttattttatattttgttatagaaa 227  Q
    ||||||||||||||| |||||||| ||||||||||||||    
T  52926219 aaaaacagtttgactatattttatcttttgttatagaaa 52926181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 169
Target Start/End: Original strand, 55547038 - 55547104
Alignment:
Q  103 aacttatgacatgtccataagttgtttccagctcattttcatattctttgcagaatagcttatgaaa 169  Q
    ||||||||||||||| |||||||||||  |||| |||| ||||  |||| ||| |||||||||||||    
T  55547038 aacttatgacatgtctataagttgtttttagcttatttccataaacttttcagcatagcttatgaaa 55547104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 227
Target Start/End: Original strand, 20936082 - 20936119
Alignment:
Q  190 aaaacagtttgactttattttatattttgttatagaaa 227  Q
    |||| |||||||||||||||||| ||||||||||||||    
T  20936082 aaaatagtttgactttattttatcttttgttatagaaa 20936119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 227
Target Start/End: Complemental strand, 23815360 - 23815323
Alignment:
Q  190 aaaacagtttgactttattttatattttgttatagaaa 227  Q
    ||||||||||||| ||||||||| ||||||||||||||    
T  23815360 aaaacagtttgacattattttatcttttgttatagaaa 23815323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 241
Target Start/End: Complemental strand, 24936286 - 24936249
Alignment:
Q  204 ttattttatattttgttatagaaacaacatatacataa 241  Q
    |||||||||||||||||||||||| ||| |||||||||    
T  24936286 ttattttatattttgttatagaaataacttatacataa 24936249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 25583677 - 25583636
Alignment:
Q  94 tatggaaacaacttatgacatgtccataagttgtttccagct 135  Q
    |||| ||||||||||||||||||||| ||||||||| |||||    
T  25583677 tatgcaaacaacttatgacatgtccaaaagttgttttcagct 25583636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 227
Target Start/End: Original strand, 54325117 - 54325154
Alignment:
Q  190 aaaacagtttgactttattttatattttgttatagaaa 227  Q
    ||||||||||||||||||||||| |||||| |||||||    
T  54325117 aaaacagtttgactttattttatcttttgtaatagaaa 54325154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 158 - 223
Target Start/End: Original strand, 55870390 - 55870454
Alignment:
Q  158 tagcttatgaaatcaacttgtagctcatacgaaaaacagtttgactttattttatattttgttata 223  Q
    |||||||||||| |||||| ||||| ||  ||||| |||||||||||||||| || ||||||||||    
T  55870390 tagcttatgaaaacaacttatagcttatgtgaaaa-cagtttgactttatttgatcttttgttata 55870454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 94 - 122
Target Start/End: Original strand, 2874609 - 2874637
Alignment:
Q  94 tatggaaacaacttatgacatgtccataa 122  Q
    |||||||||||||||||||||||||||||    
T  2874609 tatggaaacaacttatgacatgtccataa 2874637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 241
Target Start/End: Complemental strand, 4191730 - 4191678
Alignment:
Q  190 aaaacagtttgacttta-ttttatattttgttatagaaacaacatatacataa 241  Q
    ||||||||||||||||| |||||| |||||||||||||| | | |||||||||    
T  4191730 aaaacagtttgactttatttttatcttttgttatagaaatagcttatacataa 4191678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 94 - 122
Target Start/End: Complemental strand, 4243651 - 4243623
Alignment:
Q  94 tatggaaacaacttatgacatgtccataa 122  Q
    |||||||||||||||||||||||||||||    
T  4243651 tatggaaacaacttatgacatgtccataa 4243623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 94 - 126
Target Start/End: Complemental strand, 6428103 - 6428071
Alignment:
Q  94 tatggaaacaacttatgacatgtccataagttg 126  Q
    |||| ||||||||||||||||||||||||||||    
T  6428103 tatgaaaacaacttatgacatgtccataagttg 6428071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 189 - 229
Target Start/End: Complemental strand, 56007677 - 56007637
Alignment:
Q  189 aaaaacagtttgactttattttatattttgttatagaaaca 229  Q
    |||||||||||||||||||||| | |||||| |||||||||    
T  56007677 aaaaacagtttgactttattttttcttttgtcatagaaaca 56007637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 97 - 227
Target Start/End: Original strand, 28689440 - 28689571
Alignment:
Q  97 ggaaacaacttatgacatgtccataagttgtttccagctcattttcatattctttgcagaatagct--tatgaaatcaacttgtagctcatacgaaaaac 194  Q
    ||||||| ||||||||||||||||||||||||| ||||| |||||||||  |||| ||  ||||||  ||||||| |||||| ||||| ||| ||||| |    
T  28689440 ggaaacagcttatgacatgtccataagttgttttcagcttattttcataagctttccaagatagcttatatgaaaacaacttatagcttatatgaaaacc 28689539  T
Q  195 agtttgactttattttatattttgttatagaaa 227  Q
    |  |||  |||||||||| ||||| ||||||||    
T  28689540 a-cttgcatttattttatcttttgatatagaaa 28689571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 98 - 223
Target Start/End: Complemental strand, 30371229 - 30371105
Alignment:
Q  98 gaaacaacttatgacatgtccataagttgtttccagctcattttcatattctttgcagaatagcttatgaaatcaacttgtagctcatacgaaaaacagt 197  Q
    ||||||||| |||||||||||||||||||||| ||||| ||||  |||  || | || |||  ||||||||| |||||| ||||| ||| | |||||| |    
T  30371229 gaaacaactaatgacatgtccataagttgttttcagcttatttcaatacgctctccaaaatgtcttatgaaaacaacttatagcttatatg-aaaacaat 30371131  T
Q  198 ttgactttattttatattttgttata 223  Q
    |||| |||||||||| ||||||||||    
T  30371130 ttgagtttattttatcttttgttata 30371105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 15360884 - 15360831
Alignment:
Q  190 aaaacagtttgactttattttatattttgttatagaaacaacatatacataaac 243  Q
    ||||||||||||||||||||||| |||||||||||||| |||  ||||||||||    
T  15360884 aaaacagtttgactttattttatcttttgttatagaaataactaatacataaac 15360831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 94 - 227
Target Start/End: Complemental strand, 15438048 - 15437916
Alignment:
Q  94 tatggaaacaacttatgacatgtccataagttgtttccagctcattttcatattctttgcagaatagcttatgaaatcaacttgtagctcatacgaaaaa 193  Q
    ||||||||||||||||||||||| ||||||||  || ||||| |||| | ||  || |  || ||||| ||||||| |||||| | ||| ||  |||||     
T  15438048 tatggaaacaacttatgacatgttcataagttactttcagcttatttccgtaaactctcgaggatagcctatgaaaacaacttctggctgatttgaaaa- 15437950  T
Q  194 cagtttgactttattttatattttgttatagaaa 227  Q
    ||||||||||| ||||||| ||||||||||||||    
T  15437949 cagtttgacttaattttattttttgttatagaaa 15437916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 96 - 241
Target Start/End: Original strand, 29007703 - 29007847
Alignment:
Q  96 tggaaacaacttatgacatgtccataagttgtttccagctcattttcatattctttgcagaatagcttatgaaatcaacttgtagctcatacgaaaaaca 195  Q
    ||||||||| |||||| |||| |||||||||||| ||||| ||||  |||  |||| || | ||||  |||||| |||||| ||||| ||| | |||| |    
T  29007703 tggaaacaatttatgatatgttcataagttgttttcagcttatttcgataagcttttcaaagtagccgatgaaaacaacttatagcttatatg-aaaata 29007801  T
Q  196 gtttgactttattttatattttgttatagaaacaacatatacataa 241  Q
    ||||||||||| ||| | |||||||||||||| ||| || ||||||    
T  29007802 gtttgactttaatttttcttttgttatagaaataacttagacataa 29007847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 96 - 243
Target Start/End: Complemental strand, 49517144 - 49517007
Alignment:
Q  96 tggaaacaacttatgacatgtccataagttgtttccagctcattttcatattctttgcagaatagcttatgaaatcaacttgtagctcatacgaaaaaca 195  Q
    ||||||||||||||||||||||||||||| |||| ||| | ||||| |||  ||         ||||||||||| || ||| ||||| | | ||||| ||    
T  49517144 tggaaacaacttatgacatgtccataagtggttttcaggttattttgataagct---------agcttatgaaaacagcttatagcttaaatgaaaa-ca 49517055  T
Q  196 gtttgactttattttatattttgttatagaaacaacatatacataaac 243  Q
     |||||||||||||||| |||||||||||||| ||| |||||| ||||    
T  49517054 atttgactttattttatcttttgttatagaaataacttatacacaaac 49517007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 105 - 227
Target Start/End: Original strand, 10199404 - 10199525
Alignment:
Q  105 cttatgacatgtccataagttgtttccagctcattttcatattctttgcagaatagcttatgaaatcaacttgtagctcatacgaaaaacagtttgactt 204  Q
    |||||||||||| |||||||||||| ||||| |||||||||  || |  | ||||||||||||||  | ||| | | | ||||| |||| ||||||||||    
T  10199404 cttatgacatgttcataagttgttttcagcttattttcataagctctctaaaatagcttatgaaaaaagcttatcgattatacg-aaaatagtttgactt 10199502  T
Q  205 tattttatattttgttatagaaa 227  Q
    |||||||| ||  ||||||||||    
T  10199503 tattttatcttgggttatagaaa 10199525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 112 - 182
Target Start/End: Original strand, 39347970 - 39348040
Alignment:
Q  112 catgtccataagttgtttccagctcattttcatattctttgcagaatagcttatgaaatcaacttgtagct 182  Q
    |||||||||||||||||| ||||| |||| ||||  |||||||| |||| |||||||| |||||| |||||    
T  39347970 catgtccataagttgttttcagcttatttccataagctttgcaggatagtttatgaaaacaacttatagct 39348040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 112 - 217
Target Start/End: Original strand, 5592688 - 5592792
Alignment:
Q  112 catgtccataagttgtttccagctcattttcatattctttgcagaatagcttatgaaatcaacttgtagctcatacgaaaaacagtttgactttatttta 211  Q
    |||| ||||||||||||||||||| |||||||||  || |  ||| |||||||||||| |||||| ||||| ||| | | |||| || ||||||||||||    
T  5592688 catgaccataagttgtttccagcttattttcataagctcttaagactagcttatgaaaacaacttatagcttatatg-acaacaattcgactttatttta 5592786  T
Q  212 tatttt 217  Q
    | ||||    
T  5592787 tctttt 5592792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 92 - 141
Target Start/End: Original strand, 7761594 - 7761643
Alignment:
Q  92 tatatggaaacaacttatgacatgtccataagttgtttccagctcatttt 141  Q
    ||||||||||||| |||||||||||||||||||| ||| ||||| |||||    
T  7761594 tatatggaaacaatttatgacatgtccataagtttttttcagcttatttt 7761643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 96 - 145
Target Start/End: Complemental strand, 15579565 - 15579516
Alignment:
Q  96 tggaaacaacttatgacatgtccataagttgtttccagctcattttcata 145  Q
    |||||||||||||||||||||||||||||||||  ||||| |||| ||||    
T  15579565 tggaaacaacttatgacatgtccataagttgttctcagcttatttccata 15579516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 174 - 227
Target Start/End: Original strand, 15687138 - 15687190
Alignment:
Q  174 cttgtagctcatacgaaaaacagtttgactttattttatattttgttatagaaa 227  Q
    ||||||||| ||||||||| || ||| |||||||||||||||||||||||||||    
T  15687138 cttgtagcttatacgaaaa-caatttaactttattttatattttgttatagaaa 15687190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 106 - 227
Target Start/End: Complemental strand, 25479654 - 25479534
Alignment:
Q  106 ttatgacatgtccataagttgtttccagctcattttcatattctttgcagaatagcttatgaaatcaacttgtagctcatacgaaaaacagtttgacttt 205  Q
    ||||||||||| ||| |||||||| ||||| |||||||||  || |  || ||||||||||||| |||||| ||||  ||| | || ||| |||||| ||    
T  25479654 ttatgacatgttcattagttgttttcagcttattttcataagctctctaggatagcttatgaaaacaacttatagcctatatg-aagacaatttgacgtt 25479556  T
Q  206 attttatattttgttatagaaa 227  Q
    ||||||| ||| ||||||||||    
T  25479555 attttatctttggttatagaaa 25479534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 158 - 223
Target Start/End: Original strand, 28467356 - 28467420
Alignment:
Q  158 tagcttatgaaatcaacttgtagctcatacgaaaaacagtttgactttattttatattttgttata 223  Q
    |||||||||||| |||||||||||| ||| | |||| | |||||||||||||||| ||||||||||    
T  28467356 tagcttatgaaaacaacttgtagcttatatg-aaaataatttgactttattttatcttttgttata 28467420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 194 - 227
Target Start/End: Original strand, 30259571 - 30259604
Alignment:
Q  194 cagtttgactttattttatattttgttatagaaa 227  Q
    ||||||||||||||||||||||||||||||||||    
T  30259571 cagtttgactttattttatattttgttatagaaa 30259604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 101 - 170
Target Start/End: Original strand, 37593676 - 37593745
Alignment:
Q  101 acaacttatgacatgtccataagttgtttccagctcattttcatattctttgcagaatagcttatgaaat 170  Q
    |||||||||||||||| |||||| ||||| ||||| |||||||||  || | || |||||||||||||||    
T  37593676 acaacttatgacatgttcataagctgttttcagcttattttcataagctcttcaaaatagcttatgaaat 37593745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 45327665 - 45327624
Alignment:
Q  94 tatggaaacaacttatgacatgtccataagttgtttccagct 135  Q
    ||||||||||||||||||||||||||||| |||||| |||||    
T  45327665 tatggaaacaacttatgacatgtccataaattgttttcagct 45327624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 154 - 243
Target Start/End: Original strand, 48830121 - 48830209
Alignment:
Q  154 agaatagcttatgaaatcaacttgtagctcatacgaaaaacagtttgactttattttatattttgttatagaaacaacatatacataaac 243  Q
    |||||||||||||||| ||  || ||||| ||| |||||  |||||||||||||||||| ||| || ||||||| ||| |||||||||||    
T  48830121 agaatagcttatgaaaacagtttatagcttatatgaaaat-agtttgactttattttatctttggtaatagaaataacttatacataaac 48830209  T

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Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 94 - 134
Target Start/End: Complemental strand, 17628684 - 17628644
Alignment:
Q  94 tatggaaacaacttatgacatgtccataagttgtttccagc 134  Q
    |||||||||||||||||||||||||||||| ||||| ||||    
T  17628684 tatggaaacaacttatgacatgtccataagctgttttcagc 17628644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 27140560 - 27140512
Alignment:
Q  97 ggaaacaacttatgacatgtccataagttgtttccagctcattttcata 145  Q
    ||||||| ||||||||||||||||||||||||| ||||| |||| ||||    
T  27140560 ggaaacagcttatgacatgtccataagttgttttcagcttatttgcata 27140512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 94 - 130
Target Start/End: Original strand, 30418167 - 30418203
Alignment:
Q  94 tatggaaacaacttatgacatgtccataagttgtttc 130  Q
    |||||||||||||||||||||||||||||||| ||||    
T  30418167 tatggaaacaacttatgacatgtccataagttatttc 30418203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 191 - 227
Target Start/End: Original strand, 35080151 - 35080187
Alignment:
Q  191 aaacagtttgactttattttatattttgttatagaaa 227  Q
    |||||||||||||||||||||| ||||||||||||||    
T  35080151 aaacagtttgactttattttattttttgttatagaaa 35080187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 241
Target Start/End: Original strand, 7274019 - 7274070
Alignment:
Q  190 aaaacagtttgactttattttatattttgttatagaaacaacatatacataa 241  Q
    |||||| ||||||||||||| || |||||||||| ||| |||||||||||||    
T  7274019 aaaacaatttgactttatttcatcttttgttataaaaataacatatacataa 7274070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 160
Target Start/End: Complemental strand, 11695947 - 11695880
Alignment:
Q  93 atatggaaacaacttatgacatgtccataagttgtttccagctcattttcatattctttgcagaatag 160  Q
    |||||||||||  |||||||||||||||||| ||||| || || |||||||||  |||| ||||||||    
T  11695947 atatggaaacagtttatgacatgtccataagctgttttcaacttattttcataagctttccagaatag 11695880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 241
Target Start/End: Complemental strand, 15799694 - 15799643
Alignment:
Q  190 aaaacagtttgactttattttatattttgttatagaaacaacatatacataa 241  Q
    ||||||||||||||||||||  | |||||||| ||||||| |||||||||||    
T  15799694 aaaacagtttgactttatttctttttttgttaaagaaacatcatatacataa 15799643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 3224503 - 3224457
Alignment:
Q  99 aaacaacttatgacatgtccataagttgtttccagctcattttcata 145  Q
    |||| |||||||||||||||||||||||||  ||||| |||||||||    
T  3224503 aaactacttatgacatgtccataagttgttctcagcttattttcata 3224457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 97 - 135
Target Start/End: Original strand, 15064823 - 15064861
Alignment:
Q  97 ggaaacaacttatgacatgtccataagttgtttccagct 135  Q
    ||||||||||||||| ||||||||||||||||| |||||    
T  15064823 ggaaacaacttatgatatgtccataagttgttttcagct 15064861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 94 - 168
Target Start/End: Original strand, 26461926 - 26462000
Alignment:
Q  94 tatggaaacaacttatgacatgtccataagttgtttccagctcattttcatattctttgcagaatagcttatgaa 168  Q
    |||| ||||||| |||| |||||||||  ||||||| ||||| |||||||||  || ||||| ||||||||||||    
T  26461926 tatgaaaacaacatatggcatgtccatgggttgttttcagcttattttcataagctctgcaggatagcttatgaa 26462000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 157 - 227
Target Start/End: Original strand, 27738228 - 27738297
Alignment:
Q  157 atagcttatgaaatcaacttgtagctcatacgaaaaacagtttgactttattttatattttgttatagaaa 227  Q
    ||||||||||||| ||| || ||||| ||| ||||| || |||||||||||||||| ||||||| ||||||    
T  27738228 atagcttatgaaaacaaattatagcttatatgaaaa-caatttgactttattttatcttttgttgtagaaa 27738297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 97 - 135
Target Start/End: Complemental strand, 35350722 - 35350684
Alignment:
Q  97 ggaaacaacttatgacatgtccataagttgtttccagct 135  Q
    ||||||||||||||||||||||||||| ||||| |||||    
T  35350722 ggaaacaacttatgacatgtccataagctgttttcagct 35350684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 161 - 227
Target Start/End: Complemental strand, 48064327 - 48064262
Alignment:
Q  161 cttatgaaatcaacttgtagctcatacgaaaaacagtttgactttattttatattttgttatagaaa 227  Q
    |||||||||||||||| || || |||| ||||| ||||| |||||||||||| ||||| ||||||||    
T  48064327 cttatgaaatcaacttataacttatac-aaaaatagttttactttattttatcttttgctatagaaa 48064262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 129
Target Start/End: Complemental strand, 2234821 - 2234788
Alignment:
Q  96 tggaaacaacttatgacatgtccataagttgttt 129  Q
    ||||||||||||||||||||| ||||||||||||    
T  2234821 tggaaacaacttatgacatgttcataagttgttt 2234788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 227
Target Start/End: Complemental strand, 3924709 - 3924577
Alignment:
Q  94 tatggaaacaacttatgacatgtccataagttgtttccagctcattttcatattctttgcagaatagcttatgaaatcaacttgtagctcatacgaaaaa 193  Q
    |||| |||||| |||||| ||||  ||||||||||| | ||| |||| ||||  || | ||| ||||||||| ||| |||||  ||| | |||||||||     
T  3924709 tatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactcttcaggatagcttataaaaacaactaatagattatacgaaaa- 3924611  T
Q  194 cagtttgactttattttatattttgttatagaaa 227  Q
    ||||||| ||| ||||||| || |||||||||||    
T  3924610 cagtttgccttgattttatcttgtgttatagaaa 3924577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 145
Target Start/End: Complemental strand, 4549313 - 4549264
Alignment:
Q  96 tggaaacaacttatgacatgtccataagttgtttccagctcattttcata 145  Q
    ||||||||| |||||||||||| ||||||||||| ||||| |||| ||||    
T  4549313 tggaaacaatttatgacatgtctataagttgttttcagcttatttccata 4549264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 226
Target Start/End: Complemental strand, 6265085 - 6265048
Alignment:
Q  189 aaaaacagtttgactttattttatattttgttatagaa 226  Q
    ||||||| |||||||||||||||| |||||||||||||    
T  6265085 aaaaacaatttgactttattttattttttgttatagaa 6265048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 227
Target Start/End: Original strand, 14737785 - 14737822
Alignment:
Q  190 aaaacagtttgactttattttatattttgttatagaaa 227  Q
    |||||| |||||||||||||||| ||||||||||||||    
T  14737785 aaaacaatttgactttattttatcttttgttatagaaa 14737822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 123
Target Start/End: Original strand, 17631087 - 17631116
Alignment:
Q  94 tatggaaacaacttatgacatgtccataag 123  Q
    ||||||||||||||||||||||||||||||    
T  17631087 tatggaaacaacttatgacatgtccataag 17631116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 227
Target Start/End: Original strand, 17631181 - 17631218
Alignment:
Q  190 aaaacagtttgactttattttatattttgttatagaaa 227  Q
    ||||||||| ||||||||||||| ||||||||||||||    
T  17631181 aaaacagttagactttattttatcttttgttatagaaa 17631218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 123
Target Start/End: Original strand, 19412582 - 19412611
Alignment:
Q  94 tatggaaacaacttatgacatgtccataag 123  Q
    ||||||||||||||||||||||||||||||    
T  19412582 tatggaaacaacttatgacatgtccataag 19412611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 241
Target Start/End: Complemental strand, 23895324 - 23895275
Alignment:
Q  192 aacagtttgactttattttatattttgttatagaaacaacatatacataa 241  Q
    |||||||||| |||||||||| |||||||||||||| | | |||||||||    
T  23895324 aacagtttgaatttattttatcttttgttatagaaatagcttatacataa 23895275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 140
Target Start/End: Original strand, 24968406 - 24968447
Alignment:
Q  99 aaacaacttatgacatgtccataagttgtttccagctcattt 140  Q
    ||||||||||||||||||||||||| |||||| |||| ||||    
T  24968406 aaacaacttatgacatgtccataagctgtttctagcttattt 24968447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 140
Target Start/End: Complemental strand, 25432291 - 25432250
Alignment:
Q  99 aaacaacttatgacatgtccataagttgtttccagctcattt 140  Q
    ||||||||||||||||||||||||| |||||| |||| ||||    
T  25432291 aaacaacttatgacatgtccataagctgtttctagcttattt 25432250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 27146006 - 27145965
Alignment:
Q  94 tatggaaacaacttatgacatgtccataagttgtttccagct 135  Q
    |||||||||| ||||||||||||||||||||| ||| |||||    
T  27146006 tatggaaacagcttatgacatgtccataagttattttcagct 27145965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 44032079 - 44032132
Alignment:
Q  190 aaaacagtttgactttattttatattttgttatagaaacaacatatacataaac 243  Q
    |||||| |||||||||||||||  |||||||||||||||  | |||||||||||    
T  44032079 aaaacaatttgactttattttagcttttgttatagaaacggcttatacataaac 44032132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 242
Target Start/End: Complemental strand, 4338639 - 4338587
Alignment:
Q  190 aaaacagtttgactttattttatattttgttatagaaacaacatatacataaa 242  Q
    ||||||||||||||||||||||| || |||| |||| | ||| ||||||||||    
T  4338639 aaaacagtttgactttattttatcttctgttctagacataacttatacataaa 4338587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 238
Target Start/End: Original strand, 6031559 - 6031607
Alignment:
Q  190 aaaacagtttgactttattttatattttgttatagaaacaacatataca 238  Q
    ||||||||||| | ||||||||||||||||||||| |||| | ||||||    
T  6031559 aaaacagtttggcattattttatattttgttatagtaacagcttataca 6031607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 156 - 212
Target Start/End: Original strand, 10581124 - 10581179
Alignment:
Q  156 aatagcttatgaaatcaacttgtagctcatacgaaaaacagtttgactttattttat 212  Q
    |||||||||||||| |||||| ||||| | | |||||| ||||||||||||||||||    
T  10581124 aatagcttatgaaaacaacttatagcttaaatgaaaaa-agtttgactttattttat 10581179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 105 - 145
Target Start/End: Original strand, 12477283 - 12477323
Alignment:
Q  105 cttatgacatgtccataagttgtttccagctcattttcata 145  Q
    ||||||||||||||||||||||||| ||||| |||| ||||    
T  12477283 cttatgacatgtccataagttgttttcagcttatttccata 12477323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 189 - 241
Target Start/End: Complemental strand, 15488945 - 15488893
Alignment:
Q  189 aaaaacagtttgactttattttatattttgttatagaaacaacatatacataa 241  Q
    ||||| ||||||||||||| |||| |||| | ||||||||||| |||||||||    
T  15488945 aaaaatagtttgactttatgttatcttttatcatagaaacaacttatacataa 15488893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 157 - 241
Target Start/End: Complemental strand, 17269272 - 17269189
Alignment:
Q  157 atagcttatgaaatcaacttgtagctcatacgaaaaacagtttgactttattttatattttgttatagaaacaacatatacataa 241  Q
    ||||||||||||| |||||| | ||| ||| ||||| || ||||||||||||||   ||||||| |||||| ||| |||||||||    
T  17269272 atagcttatgaaaacaacttattgcttatatgaaaa-caatttgactttattttcacttttgttctagaaataacttatacataa 17269189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 189 - 221
Target Start/End: Complemental strand, 21002144 - 21002112
Alignment:
Q  189 aaaaacagtttgactttattttatattttgtta 221  Q
    ||||||||||||||||||||||||||| |||||    
T  21002144 aaaaacagtttgactttattttatattatgtta 21002112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 100 - 176
Target Start/End: Original strand, 27963361 - 27963437
Alignment:
Q  100 aacaacttatgacatgtccataagttgtttccagctcattttcatattctttgcagaatagcttatgaaatcaactt 176  Q
    |||| |||||||||||||||||||||||||  |||| ||||  |||  || | || |||||||||||||| ||||||    
T  27963361 aacagcttatgacatgtccataagttgtttttagcttatttatataagctctccataatagcttatgaaaacaactt 27963437  T

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Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 94 - 126
Target Start/End: Original strand, 29045897 - 29045929
Alignment:
Q  94 tatggaaacaacttatgacatgtccataagttg 126  Q
    |||| ||||||||||||||||||||||||||||    
T  29045897 tatgaaaacaacttatgacatgtccataagttg 29045929  T

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Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 242
Target Start/End: Original strand, 36151585 - 36151637
Alignment:
Q  190 aaaacagtttgactttattttatattttgttatagaaacaacatatacataaa 242  Q
    |||||| |||||||||||||||| ||||||||| |||| | | ||||||||||    
T  36151585 aaaacaatttgactttattttatcttttgttattgaaatagcttatacataaa 36151637  T

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Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 197 - 241
Target Start/End: Complemental strand, 36641858 - 36641814
Alignment:
Q  197 tttgactttattttatattttgttatagaaacaacatatacataa 241  Q
    |||||||||||||||| |||||||||||||| ||| |||| ||||    
T  36641858 tttgactttattttatcttttgttatagaaataacttatatataa 36641814  T

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Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 101 - 145
Target Start/End: Original strand, 46252674 - 46252718
Alignment:
Q  101 acaacttatgacatgtccataagttgtttccagctcattttcata 145  Q
    |||||||||||||||| |||||||||||| ||| | |||||||||    
T  46252674 acaacttatgacatgttcataagttgttttcaggttattttcata 46252718  T

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Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 52559915 - 52559943
Alignment:
Q  197 tttgactttattttatattttgttataga 225  Q
    |||||||||||||||||||||||||||||    
T  52559915 tttgactttattttatattttgttataga 52559943  T

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Target: scaffold0024 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 94 - 241
Target Start/End: Complemental strand, 27661 - 27515
Alignment:
Q  94 tatggaaacaacttatgacatgtccataagttgtttccagctcattttcatattctttgcagaatagcttatgaaatcaacttgtagctcatacgaaaaa 193  Q
    |||||||| | ||||||||||| | ||||||||||| ||||| |||| || |  |||  ||  |||| |||||||| |||||| ||| | ||| |||||     
T  27661 tatggaaatagcttatgacatggctataagttgttttcagcttatttccacacgcttaccaagatagtttatgaaaacaacttatagtttatatgaaaa- 27563  T
Q  194 cagtttgactttattttatattttgttatagaaacaacatatacataa 241  Q
    || |||||||||||||||| || ||||||||||| ||| |||||||||    
T  27562 caatttgactttattttatcttctgttatagaaataacttatacataa 27515  T

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Target: scaffold0147 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 12689 - 12730
Alignment:
Q  94 tatggaaacaacttatgacatgtccataagttgtttccagct 135  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  12689 tatggaaacaacttatgacatgtccataagttgttttcagct 12730  T

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Target: scaffold0012 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 94 - 130
Target Start/End: Complemental strand, 38677 - 38641
Alignment:
Q  94 tatggaaacaacttatgacatgtccataagttgtttc 130  Q
    |||||||| ||||||||||||||||||||||||||||    
T  38677 tatggaaataacttatgacatgtccataagttgtttc 38641  T

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Target: scaffold0311 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 145
Target Start/End: Original strand, 10602 - 10653
Alignment:
Q  94 tatggaaacaacttatgacatgtccataagttgtttccagctcattttcata 145  Q
    |||| |||||||| |||||||||||||||||||||| ||||| |||| ||||    
T  10602 tatgtaaacaactaatgacatgtccataagttgttttcagcttatttccata 10653  T

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Target: scaffold0590 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 195 - 241
Target Start/End: Original strand, 1159 - 1205
Alignment:
Q  195 agtttgactttattttatattttgttatagaaacaacatatacataa 241  Q
    |||||||||||||||||| |||||||||||||| | | |||||||||    
T  1159 agtttgactttattttatcttttgttatagaaatagcttatacataa 1205  T

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Target: scaffold0275 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 195 - 241
Target Start/End: Complemental strand, 2816 - 2770
Alignment:
Q  195 agtttgactttattttatattttgttatagaaacaacatatacataa 241  Q
    |||||||||||||||||| |||||||||||||| | | |||||||||    
T  2816 agtttgactttattttatcttttgttatagaaatagcttatacataa 2770  T

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Target: scaffold0103 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 190 - 240
Target Start/End: Complemental strand, 51558 - 51508
Alignment:
Q  190 aaaacagtttgactttattttatattttgttatagaaacaacatatacata 240  Q
    |||||| ||| ||||||||||||||||||||||| ||| ||| ||||||||    
T  51558 aaaacaatttaactttattttatattttgttataaaaataacttatacata 51508  T

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Target: scaffold0508 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 197 - 241
Target Start/End: Original strand, 9862 - 9906
Alignment:
Q  197 tttgactttattttatattttgttatagaaacaacatatacataa 241  Q
    |||||||| ||||||| |||||||||||||| ||| |||||||||    
T  9862 tttgacttaattttattttttgttatagaaataacttatacataa 9906  T

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Target: scaffold0286 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 92 - 176
Target Start/End: Complemental strand, 16197 - 16113
Alignment:
Q  92 tatatggaaacaacttatgacatgtccataagttgtttccagctcattttcatattctttgcagaatagcttatgaaatcaactt 176  Q
    ||||||| |||| |||| |||||||||||||||||||| || || |||| |||| ||||| ||  | |||||| |||| ||||||    
T  16197 tatatgggaacaccttacgacatgtccataagttgttttcaacttatttccataatctttccaagacagcttaggaaaacaactt 16113  T

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