View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2575_high_6 (Length: 209)
Name: NF2575_high_6
Description: NF2575
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2575_high_6 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 33885473 - 33885265
Alignment:
| Q |
1 |
ttcacccatgaaagacaagactcacatccacaatcagaccaacttttcactatccttccaccacattttccattagaatcttcttcctccctttttctac |
100 |
Q |
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| T |
33885473 |
ttcacccatgaaagacaagactcacatccacaatcagaccaacttttcactatccttccaccacattttccataagaatcttcttcctccctttttccac |
33885374 |
T |
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| Q |
101 |
caaattgaagcaaacctatttctctaaacatgttcttcctctcatacaaactttctgaaacaccatcatcttcatcattcatcaccatcttcttctgtat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
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| T |
33885373 |
caaattgaagcaaacctatttctctaaacatgttcttcctctcatacaaactttctgaaacaccatcatcttcatcattcatcaccatcttcttctgtct |
33885274 |
T |
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| Q |
201 |
ctcccattt |
209 |
Q |
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||||||||| |
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| T |
33885273 |
ctcccattt |
33885265 |
T |
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