View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2577_low_1 (Length: 462)
Name: NF2577_low_1
Description: NF2577
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2577_low_1 |
 | |
|
| [»] chr4 (4 HSPs) |
| |
|
| [»] scaffold1207 (1 HSPs) |
| | |
|
Alignment Details
Target: chr4 (Bit Score: 398; Significance: 0; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 398; E-Value: 0
Query Start/End: Original strand, 1 - 462
Target Start/End: Original strand, 30775419 - 30775873
Alignment:
| Q |
1 |
cacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctgctgcagtg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30775419 |
cacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctgctgcagtg |
30775518 |
T |
|
| Q |
101 |
ggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagcaggcacatacagtg |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
30775519 |
ggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagcaggcaca----gtg |
30775614 |
T |
|
| Q |
201 |
acaactgcatttttaactggggattccaaatacatctctgcaatctctctcatatttgtgaggactattgatgaaatttcctcggcacggaggagtttct |
300 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
30775615 |
ataactgcatttttaactggggattccaaatacatctctgcaatctctctcatatttgtgaggactattgatgaaatttcctcggcacagaggagtttct |
30775714 |
T |
|
| Q |
301 |
cctggcccttgaacttaagggaaatcatgggtttgtcattaacaccagaaacaaccttgaatggccacaacaatatatctttttgaacaacagggtcgct |
400 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
30775715 |
cctggcccttgaacttaagggaaatcatgggtttgtcattaacaccagaaacaaccttgaatggccacaacaaaatatctttttgaacaacagggtcgct |
30775814 |
T |
|
| Q |
401 |
aaatttcctaccaattaaccttttattagcatctgnnnnnnntgtaatattaatagtaaatt |
462 |
Q |
| |
|
||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |
|
|
| T |
30775815 |
aaatttcctaccaattaacctttta---gcatctgaaaaaaatgtaatattaatagtaaatt |
30775873 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 1 - 418
Target Start/End: Complemental strand, 9335892 - 9335479
Alignment:
| Q |
1 |
cacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctgctgcagtg |
100 |
Q |
| |
|
|||||||||||| || ||||| |||||||||||||||||||| | | | ||||||| | |||||| ||||| ||||||||||||||||| ||||| |
|
|
| T |
9335892 |
cacatcaaaagtaccgccacccagatcaaagacaaaaatatttcggttaccatcacagtcatttctcttatcaaggccatatgcaatagctgcagcagta |
9335793 |
T |
|
| Q |
101 |
ggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagcaggcacatacagtg |
200 |
Q |
| |
|
|| ||||| ||||| | || |||||||| |||||||| | ||||||||| || ||||| |||||||| | ||||||||| ||||| ||||| || |
|
|
| T |
9335792 |
ggttcattgattatccgaatgacattaaggccagcaatagtaccagcatctatggtggcctttcgctgagaatcattgaagtaagctggcacg----gta |
9335697 |
T |
|
| Q |
201 |
acaactgcatttttaactggggattccaaatacatctctgcaatctctctcatatttgtgaggactattgatgaaatttcctcggcacggaggagtttct |
300 |
Q |
| |
|
||||| ||||| || || || || ||||||| ||| |||| ||||||||| ||||| || | || || || |||||||| |||| | | | |||| |
|
|
| T |
9335696 |
acaacggcattcttgaccggcgaccccaaatatgcctccgcaacctctctcatctttgtaagcaacatagaagatatttcctcagcacaaaagtgcttct |
9335597 |
T |
|
| Q |
301 |
cctggcccttgaacttaagggaaatcatgggtttgtcattaacaccagaaacaaccttgaatggccacaacaatatatctttttgaacaacagggtcgct |
400 |
Q |
| |
|
| || |||||| | |||| | |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| | || || |
|
|
| T |
9335596 |
cttgacccttgtagttaacagtaatcataggtttgtcattaacaccagaaataaccttgaatggccacaacaatatatctctttgaacaaccagatcact |
9335497 |
T |
|
| Q |
401 |
aaatttcctaccaattaa |
418 |
Q |
| |
|
||| ||||||||| |||| |
|
|
| T |
9335496 |
aaacttcctaccagttaa |
9335479 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 2 - 425
Target Start/End: Original strand, 35132616 - 35133033
Alignment:
| Q |
2 |
acatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctgctgcagtgg |
101 |
Q |
| |
|
||||||||||| |||||||||||||| |||||||||||||| || || |||| | |||||| ||||| |||||||||| ||||| ||||| | |
|
|
| T |
35132616 |
acatcaaaagtgccaccaccaagatcgaagacaaaaatattttgttctccagcacaatcagatctcttgtcaaggccatatgcaaccgctgcggcagtag |
35132715 |
T |
|
| Q |
102 |
gctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagcaggcacatacagtga |
201 |
Q |
| |
|
| ||||| |||| |||||||||||| |||||||||| ||||||||||| |||||||||||||| || | |||| | |||||||||||| ||||| | |
|
|
| T |
35132716 |
gttcattcattactctcataacattgggaccagcaatagcaccagcatctatagtggcttttcgttgagaatcactaaaataagcaggc----acagtaa |
35132811 |
T |
|
| Q |
202 |
caactgcatttttaactggggattccaaatacatctctgcaatctctctcatatttgtgaggactattgatgaaatttcctcggcacggaggagtttctc |
301 |
Q |
| |
|
|||||||||| ||||| | ||||| |||| || ||||||| |||| ||| |||||||| || || ||||| | ||| || ||| ||| | || || |
|
|
| T |
35132812 |
caactgcattcttaacagttgattctaaat--atgcctgcaatttctcgcatctttgtgagtaccatggatgatacttcttccgcatagagttgcttttc |
35132909 |
T |
|
| Q |
302 |
ctggcccttgaacttaagggaaatcatgggtttgtcattaacaccagaaacaaccttgaatggccacaacaatatatctttttgaacaacagggtcgcta |
401 |
Q |
| |
|
|| ||||| |||||| | |||||||||||||||||| ||||| | | |||||||||||||| | || |||||| | |||||||| ||| || ||| |
|
|
| T |
35132910 |
ctcatccttgtacttaaccgtaatcatgggtttgtcatttacaccggcagtgaccttgaatggccatagcagtatatcatcttgaacaataggatcacta |
35133009 |
T |
|
| Q |
402 |
aatttcctaccaattaacctttta |
425 |
Q |
| |
|
|| ||||||||||||||||||||| |
|
|
| T |
35133010 |
aacttcctaccaattaacctttta |
35133033 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 66 - 192
Target Start/End: Complemental strand, 23596521 - 23596395
Alignment:
| Q |
66 |
tcttctcaagtccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcg |
165 |
Q |
| |
|
|||| ||||| ||||| |||||||| || ||||||||||| ||||| |||||||| ||||| || |||| |||| ||||||||||| |||| |||| || |
|
|
| T |
23596521 |
tcttatcaagaccataagcaatagcggcagcagtgggctcgttaataattctcatcacattgagtccagaaatgacaccagcatccttagtagcttgacg |
23596422 |
T |
|
| Q |
166 |
ctgtgcatcattgaaataagcaggcac |
192 |
Q |
| |
|
|||| ||| ||||| || |||||||| |
|
|
| T |
23596421 |
ttgtgaatcgttgaagtatgcaggcac |
23596395 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 204; Significance: 1e-111; HSPs: 11)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 421
Target Start/End: Complemental strand, 16661993 - 16661577
Alignment:
| Q |
1 |
cacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctgctgcagtg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| || ||| ||||||| ||| ||| || ||||| |||||||||||||||||||||||| |
|
|
| T |
16661993 |
cacatcaaaagtcccaccaccaagatcaaagacaaaaatatttctttcaccatcacaattacttcttttgtcaaggccatatgcaatagctgctgcagtg |
16661894 |
T |
|
| Q |
101 |
ggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagcaggcacatacagtg |
200 |
Q |
| |
|
|| ||||| ||||| |||| ||| ||||| ||||||||||||||||||||||| |||||||||||||| | ||| || ||||||||||| |||||| |
|
|
| T |
16661893 |
ggttcattgattatcctcacaacgttaaggccagcaatggcaccagcatccatggtggcttttcgctgagaatcgttaaaataagcagg----aacagtg |
16661798 |
T |
|
| Q |
201 |
acaactgcatttttaactggggattccaaatacatctctgcaatctctctcatatttgtgaggactattgatgaaatttcctcggcacggaggagtttct |
300 |
Q |
| |
|
||||||||||||||||| || ||||||||||| |||||||| ||| |||| ||||||||||| || ||||| ||||||||||||| ||||| |||| |
|
|
| T |
16661797 |
acaactgcatttttaaccggtgattccaaataagcctctgcaacctccttcatgtttgtgaggacaatagatgagatttcctcggcacaaaggagcttct |
16661698 |
T |
|
| Q |
301 |
cctggcccttgaacttaagggaaatcatgggtttgtcattaacaccagaaacaaccttgaatggccacaacaatatatctttttgaacaacagggtcgct |
400 |
Q |
| |
|
|||| |||||| |||||| |||| | ||||||||||||||||||| || ||||||||| |||||||||| |||||||||||||||||| ||||| || |
|
|
| T |
16661697 |
cctgacccttgtacttaacactaatcgtaggtttgtcattaacaccagcaataaccttgaacggccacaacagtatatctttttgaacaacggggtcact |
16661598 |
T |
|
| Q |
401 |
aaatttcctaccaattaacct |
421 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
16661597 |
aaatttcctaccaattaacct |
16661577 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 1 - 421
Target Start/End: Original strand, 7542393 - 7542809
Alignment:
| Q |
1 |
cacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctgctgcagtg |
100 |
Q |
| |
|
|||||||||||| ||||| ||||||||||| ||||||||||| | ||| ||||| | | |||||| ||||| |||||||||| |||||| ||||| |
|
|
| T |
7542393 |
cacatcaaaagtgccaccgccaagatcaaaaacaaaaatatttcgctctccatcataatcagttctcttgtcaaggccatatgcaacagctgcggcagta |
7542492 |
T |
|
| Q |
101 |
ggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagcaggcacatacagtg |
200 |
Q |
| |
|
|| ||||| ||| ||||||||||| || |||||||||||||| ||||| |||||||||||||| || | |||||| ||||||||||| |||||| |
|
|
| T |
7542493 |
ggttcattcattgccctcataacattgaggccagcaatggcacccgcatctatagtggcttttcgttgagaatcattaaaataagcagg----tacagta |
7542588 |
T |
|
| Q |
201 |
acaactgcatttttaactggggattccaaatacatctctgcaatctctctcatatttgtgaggactattgatgaaatttcctcggcacggaggagtttct |
300 |
Q |
| |
|
||||||||||| | || | | ||| |||||| ||| ||||| |||| ||| |||||||| || || ||||| | || || ||| |||| |||||| |
|
|
| T |
7542589 |
acaactgcattcgtcacagttgtttctaaatacgactcagcaatttctcgcatctttgtgagtaccatagatgatacctcttcagcatggagttgtttct |
7542688 |
T |
|
| Q |
301 |
cctggcccttgaacttaagggaaatcatgggtttgtcattaacaccagaaacaaccttgaatggccacaacaatatatctttttgaacaacagggtcgct |
400 |
Q |
| |
|
|||| ||||| |||||| || |||||||||| ||||||| |||| | | |||||||||||||| |||| |||||| | |||||||||||| || || |
|
|
| T |
7542689 |
cctgatccttgtacttaacggtaatcatgggtctgtcattgtcacccgcagtcaccttgaatggccataacagtatatcatcttgaacaacaggatcact |
7542788 |
T |
|
| Q |
401 |
aaatttcctaccaattaacct |
421 |
Q |
| |
|
||| ||||||||||||||||| |
|
|
| T |
7542789 |
aaacttcctaccaattaacct |
7542809 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 425
Target Start/End: Complemental strand, 16657518 - 16657098
Alignment:
| Q |
1 |
cacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctgctgcagtg |
100 |
Q |
| |
|
|||||||||||| ||||| ||||| ||||||||||||||||||| | | ||||||| || |||||| ||||| ||||||||||||||||| ||||| |
|
|
| T |
16657518 |
cacatcaaaagtaccaccgccaaggtcaaagacaaaaatattccgtttaccatcacaatcacttctcttgtcaagaccatatgcaatagctgcagcagta |
16657419 |
T |
|
| Q |
101 |
ggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagcaggcacatacagtg |
200 |
Q |
| |
|
|| ||||| || |||| || |||||||| ||||| |||||||||||||| || |||||||||||||| | ||||||||| ||||| ||| ||||| |
|
|
| T |
16657418 |
ggttcattgataattcgaatgacattaaggccagcgatggcaccagcatctatggtggcttttcgctgcgaatcattgaagtaagctggc----acagta |
16657323 |
T |
|
| Q |
201 |
acaactgcatttttaactggggattccaaatacatctctgcaatctctctcatatttgtgaggactattgatgaaatttcctcggcacggaggagtttct |
300 |
Q |
| |
|
||||| ||||| || || || || |||| | | ||| |||| |||| ||| ||||| |||| || ||||| |||||||| |||| | | ||| |
|
|
| T |
16657322 |
acaacagcattcttgacaggcgactccataaatgcctcagcaacttctcgcatctttgtaaggatcatagatgatatttcctcagcacaaaattggctct |
16657223 |
T |
|
| Q |
301 |
cctggcccttgaacttaagggaaatcatgggtttgtcattaacaccagaaacaaccttgaatggccacaacaatatatctttttgaacaacagggtcgct |
400 |
Q |
| |
|
| || ||||| ||| ||| | |||||| ||||||||||| || || | || ||||||||||||||||| | ||||| |||||||||||||| || || |
|
|
| T |
16657222 |
cttgacccttatactgaagagtaatcattggtttgtcattcactccggcaatgaccttgaatggccacaagatgatatcattttgaacaacaggatcact |
16657123 |
T |
|
| Q |
401 |
aaatttcctaccaattaacctttta |
425 |
Q |
| |
|
||| |||||||| |||||||||||| |
|
|
| T |
16657122 |
aaacttcctaccgattaacctttta |
16657098 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 421
Target Start/End: Original strand, 12234856 - 12235272
Alignment:
| Q |
1 |
cacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctgctgcagtg |
100 |
Q |
| |
|
|||||||||||| ||||| || |||||||| ||||||||||| | || || |||| | |||||| ||||| |||||||||| ||| ||||| || |
|
|
| T |
12234856 |
cacatcaaaagtgccaccgccgagatcaaaaacaaaaatatttcgttctccaacacaatcagttctcttgtcaagaccatatgcaacagcggctgccatg |
12234955 |
T |
|
| Q |
101 |
ggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagcaggcacatacagtg |
200 |
Q |
| |
|
|| || || |||| ||||||||||| || ||||||||| |||||||||| ||||| |||||||| || | ||||||||||||||||||| || || |
|
|
| T |
12234956 |
ggttcgttcattaccctcataacattgaggccagcaatgacaccagcatctatagttgcttttcgttgagaatcattgaaataagcaggc----acggta |
12235051 |
T |
|
| Q |
201 |
acaactgcatttttaactggggattccaaatacatctctgcaatctctctcatatttgtgaggactattgatgaaatttcctcggcacggaggagtttct |
300 |
Q |
| |
|
||||||||||| |||||||| ||| ||||| ||| || || |||| ||| |||||||| || || ||||| | ||| |||| || || | |||| |
|
|
| T |
12235052 |
acaactgcattcttaactggaaattgtaaatatgcctcagcgatttctcgcatctttgtgagtaccatagatgatacttcttcgggacatagctgcttct |
12235151 |
T |
|
| Q |
301 |
cctggcccttgaacttaagggaaatcatgggtttgtcattaacaccagaaacaaccttgaatggccacaacaatatatctttttgaacaacagggtcgct |
400 |
Q |
| |
|
| | |||||| |||| | |||||||||||||||||| ||||||| | | ||||||||||||||||||| | ||| | ||||||||| | || || |
|
|
| T |
12235152 |
ctcgacccttgtacttgacaataatcatgggtttgtcattgacaccagcagcgaccttgaatggccacaacatcacatcatcttgaacaacttgatcact |
12235251 |
T |
|
| Q |
401 |
aaatttcctaccaattaacct |
421 |
Q |
| |
|
||| ||||||||||||||||| |
|
|
| T |
12235252 |
aaacttcctaccaattaacct |
12235272 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 5 - 189
Target Start/End: Complemental strand, 12245403 - 12245219
Alignment:
| Q |
5 |
tcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctgctgcagtgggct |
104 |
Q |
| |
|
|||||||| ||||||||||||||||| |||||||| || || || || |||| | ||||||| ||||| |||||||||| |||||| |||||||| | |
|
|
| T |
12245403 |
tcaaaagtgccaccaccaagatcaaacacaaaaatgtttctttctccaacacaatcagctctcttttcaaggccatatgcaacagctgcagcagtgggtt |
12245304 |
T |
|
| Q |
105 |
cattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagcagg |
189 |
Q |
| |
|
|||| |||| ||||||||||| ||||||||||| | |||||||| || || ||||||||||| | |||| | ||||||||||| |
|
|
| T |
12245303 |
cattcattaccctcataacattgagaccagcaattgagccagcatctatcgttgcttttcgctgagaatcactaaaataagcagg |
12245219 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 4 - 421
Target Start/End: Original strand, 11999564 - 11999977
Alignment:
| Q |
4 |
atcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctgctgcagtgggc |
103 |
Q |
| |
|
||||||||| ||||| |||||||||||||| ||||| || || || || |||| | ||||||| ||||| |||||||||| || ||| |||||||| |
|
|
| T |
11999564 |
atcaaaagtgccaccgccaagatcaaagactaaaatgtttctttctccaacacaatcagctctcttgtcaaggccatatgcaacagttgcagcagtgggt |
11999663 |
T |
|
| Q |
104 |
tcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagcaggcacatacagtgaca |
203 |
Q |
| |
|
||||| |||| || |||||||| | |||||||| ||||| ||||| |||||||||||||| || | |||| | |||||||| || |||||| ||| |
|
|
| T |
11999664 |
tcattcattacccttataacattgatgccagcaattgcaccggcatctatagtggcttttcgttgagaatcactaaaataagctgg----tacagtaaca |
11999759 |
T |
|
| Q |
204 |
actgcatttttaactggggattccaaatacatctctgcaatctctctcatatttgtgaggactattgatgaaatttcctcggcacggaggagtttctcct |
303 |
Q |
| |
|
|| |||| || || || ||||| ||||| ||| ||||| |||| ||| || || || || || ||||| | ||| || |||| || | ||||||| |
|
|
| T |
11999760 |
acaacattctttaccggtgattctaaatatgcctcagcaatttctcgcatcttcgttagtaccatagatgatacttcttcagcacatagctgcttctcct |
11999859 |
T |
|
| Q |
304 |
ggcccttgaacttaagggaaatcatgggtttgtcattaacaccagaaacaaccttgaatggccacaacaatatatctttttgaacaacagggtcgctaaa |
403 |
Q |
| |
|
|||| ||| |||||| | ||| || ||||||||||| ||| ||| | |||||||||||||| |||||| ||| | |||||||||| | || ||||| |
|
|
| T |
11999860 |
ggcctttgtacttaacagtaattattggtttgtcattgacatcagcagtgaccttgaatggccataacaatccatcatcttgaacaacaagatcactaaa |
11999959 |
T |
|
| Q |
404 |
tttcctaccaattaacct |
421 |
Q |
| |
|
|||| |||||||||||| |
|
|
| T |
11999960 |
cttccaaccaattaacct |
11999977 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 5 - 192
Target Start/End: Original strand, 14703579 - 14703766
Alignment:
| Q |
5 |
tcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctgctgcagtgggct |
104 |
Q |
| |
|
|||||||| ||||||||||||||||||||||| ||||| | || || || | | |||||| ||||| ||||||||||||||||| || || || | |
|
|
| T |
14703579 |
tcaaaagtaccaccaccaagatcaaagacaaatatattacgttctccaccataatcagttctcttgtcaaggccatatgcaatagctgcagctgtaggtt |
14703678 |
T |
|
| Q |
105 |
cattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagcaggcac |
192 |
Q |
| |
|
|||| |||| ||||||||||| || || ||||| |||||||||||||||||||||||| || | |||| | |||||||||||||| |
|
|
| T |
14703679 |
cattcattaccctcataacattgaggccggcaataacaccagcatccatagtggcttttctttgagaatcactaaaataagcaggcac |
14703766 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 77 - 149
Target Start/End: Complemental strand, 17716618 - 17716546
Alignment:
| Q |
77 |
ccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcat |
149 |
Q |
| |
|
||||| ||||| ||||| ||||||||||||||||| |||||||| | ||||||||||||||| |||||||||| |
|
|
| T |
17716618 |
ccataagcaatggctgcagcagtgggctcattaataattctcatgaaattaagaccagcaatagcaccagcat |
17716546 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 421
Target Start/End: Complemental strand, 12258582 - 12258166
Alignment:
| Q |
1 |
cacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctgctgcagtg |
100 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||| | | |||| || ||| || ||||| |||||||||| |||||| ||||| |
|
|
| T |
12258582 |
cacatcaaaagtgccaccaccaagatcaaagacaaaaatattccgtttttcgacacaattaattcttttgtcaaggccatatgcaaaagctgcagcagta |
12258483 |
T |
|
| Q |
101 |
ggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagcaggcacatacagtg |
200 |
Q |
| |
|
|| ||||| | ||| |||||||||| || ||| |||| ||| |||| ||||||||||| | |||| |||| | ||||| |||||| ||||| |
|
|
| T |
12258482 |
ggttcatttaatatcttcataacattcaggccaacaatattacccacatctatagtggctttcctttgtgaatcactaaaatatgcaggc----acagta |
12258387 |
T |
|
| Q |
201 |
acaactgcatttttaactggggattccaaatacatctctgcaatctctctcatatttgtgaggactattgatgaaatttcctcggcacggaggagtttct |
300 |
Q |
| |
|
||||||||||| ||||| || ||||| ||||| ||| ||||| |||| ||| ||||| | || | ||||| | ||||||||||| || | |||| |
|
|
| T |
12258386 |
acaactgcattcttaacgggtgattctaaatatgcctcagcaatttctcgcatctttgtcaataccacagatgatacttcctcggcacaaagctgcttct |
12258287 |
T |
|
| Q |
301 |
cctggcccttgaacttaagggaaatcatgggtttgtcattaacaccagaaacaaccttgaatggccacaacaatatatctttttgaacaacagggtcgct |
400 |
Q |
| |
|
| || |||| |||| | | ||||||||||||| |||| ||||||| | || || ||||||||||||| |||||| | |||||| || | || || |
|
|
| T |
12258286 |
cttgattcttgtactttaccgtaatcatgggtttgccattgacaccagcagtgactttaaatggccacaacattatatcatcttgaactacttgatcact |
12258187 |
T |
|
| Q |
401 |
aaatttcctaccaattaacct |
421 |
Q |
| |
|
||| ||||||||||||||||| |
|
|
| T |
12258186 |
aaacttcctaccaattaacct |
12258166 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 121 - 192
Target Start/End: Original strand, 43625699 - 43625770
Alignment:
| Q |
121 |
aacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagcaggcac |
192 |
Q |
| |
|
||||||||| || ||||| ||||| |||| || |||||||||||||| | ||||||||| ||||||||||| |
|
|
| T |
43625699 |
aacattaaggccgacaatgacaccaacatctatggtggcttttcgctgagaatcattgaagtaagcaggcac |
43625770 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 358 - 421
Target Start/End: Original strand, 43625930 - 43625993
Alignment:
| Q |
358 |
tgaatggccacaacaatatatctttttgaacaacagggtcgctaaatttcctaccaattaacct |
421 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||| || ||||| |||||||| |||||||| |
|
|
| T |
43625930 |
tgaatggccacaacatgatatcattttgaacaacagaatcactaaacttcctaccgattaacct |
43625993 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 180; Significance: 5e-97; HSPs: 30)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 180; E-Value: 5e-97
Query Start/End: Original strand, 1 - 421
Target Start/End: Complemental strand, 8585707 - 8585291
Alignment:
| Q |
1 |
cacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctgctgcagtg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||| | ||| ||||||| ||||| | || ||||| ||||||||||||||||| |||||| |
|
|
| T |
8585707 |
cacatcaaaagtcccaccaccaagatcaaacacaaaaatatttcgttcaccatcacagttacctttgttgtcaaggccatatgcaatagctgcagcagtg |
8585608 |
T |
|
| Q |
101 |
ggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagcaggcacatacagtg |
200 |
Q |
| |
|
|| ||||| ||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||| | ||||||||||||||||||| ||||| |
|
|
| T |
8585607 |
ggttcattgattatcctcataacattaaggccagcaatggcaccagcatccatggtggcttttcgctgagaatcattgaaataagcaggc----acagtc |
8585512 |
T |
|
| Q |
201 |
acaactgcatttttaactggggattccaaatacatctctgcaatctctctcatatttgtgaggactattgatgaaatttcctcggcacggaggagtttct |
300 |
Q |
| |
|
||||||||||||| ||| || |||| |||||| |||||||||||| |||| |||||||||| || ||||| |||||||| |||| ||| || | |
|
|
| T |
8585511 |
acaactgcattttgaacaggtgatttcaaatatgtctctgcaatcttcttcatgtttgtgaggatgatagatgatatttcctcagcacataggttctttt |
8585412 |
T |
|
| Q |
301 |
cctggcccttgaacttaagggaaatcatgggtttgtcattaacaccagaaacaaccttgaatggccacaacaatatatctttttgaacaacagggtcgct |
400 |
Q |
| |
|
| || |||||| |||||| | |||||| |||||||||||||||||||| | |||||||||||||||||||| |||||| ||||||||||| || || || |
|
|
| T |
8585411 |
cttgacccttgtacttaacagtaatcataggtttgtcattaacaccagagataaccttgaatggccacaacattatatcattttgaacaacgggatcact |
8585312 |
T |
|
| Q |
401 |
aaatttcctaccaattaacct |
421 |
Q |
| |
|
||| ||||||||||||||||| |
|
|
| T |
8585311 |
aaacttcctaccaattaacct |
8585291 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 1 - 421
Target Start/End: Original strand, 8628699 - 8629115
Alignment:
| Q |
1 |
cacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctgctgcagtg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||| | ||| |||||||||||||| | || ||||| ||||||||||||||||| |||||| |
|
|
| T |
8628699 |
cacatcaaaagtcccaccaccaagatcaaacacaaaaatatttcgttcaccatcacacctacctttgttgtcaaggccatatgcaatagctgcagcagtg |
8628798 |
T |
|
| Q |
101 |
ggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagcaggcacatacagtg |
200 |
Q |
| |
|
|| ||||| ||||| |||||||||||||| ||||||||||||||||||| ||| |||||||||||||| | ||||||||||||||||||||| ||| |
|
|
| T |
8628799 |
gggtcattgattatcctcataacattaaggccagcaatggcaccagcattcatggtggcttttcgctgagaatcattgaaataagcaggcacg----gtg |
8628894 |
T |
|
| Q |
201 |
acaactgcatttttaactggggattccaaatacatctctgcaatctctctcatatttgtgaggactattgatgaaatttcctcggcacggaggagtttct |
300 |
Q |
| |
|
|||||||||||||| || || |||| |||||| ||||||||||| ||||||||| |||| || ||||| |||||||| |||| ||| |||| |
|
|
| T |
8628895 |
acaactgcattttttacaggtgatttcaaataagcctctgcaatcttcttcatatttgcaaggataatagatgatatttcctcagcacataggttcttct |
8628994 |
T |
|
| Q |
301 |
cctggcccttgaacttaagggaaatcatgggtttgtcattaacaccagaaacaaccttgaatggccacaacaatatatctttttgaacaacagggtcgct |
400 |
Q |
| |
|
| || |||||| |||||| | |||||| || |||||||||| |||||||| ||||||||||||||| |||| ||||| |||||||||||||| || || |
|
|
| T |
8628995 |
cttgacccttgtacttaacagcaatcataggcttgtcattaagaccagaaataaccttgaatggccagaacatgatatccttttgaacaacaggatcact |
8629094 |
T |
|
| Q |
401 |
aaatttcctaccaattaacct |
421 |
Q |
| |
|
||| ||||||||||||||||| |
|
|
| T |
8629095 |
aaacttcctaccaattaacct |
8629115 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 1 - 421
Target Start/End: Complemental strand, 13333457 - 13333041
Alignment:
| Q |
1 |
cacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctgctgcagtg |
100 |
Q |
| |
|
|||||||||||| |||||||| |||||||||||||||||||| | || | ||||||| || |||||| ||||| ||||||||||||||||| ||||| |
|
|
| T |
13333457 |
cacatcaaaagtaccaccacccagatcaaagacaaaaatatttcgcttaccatcacaatcacgtctcttgtcaaggccatatgcaatagctgcagcagta |
13333358 |
T |
|
| Q |
101 |
ggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagcaggcacatacagtg |
200 |
Q |
| |
|
|| ||||| ||||||| || | |||||| |||||||| ||||||||||| || ||||| |||||||| | ||||||||| ||||| ||| ||||| |
|
|
| T |
13333357 |
ggttcattgattattcgaatgatattaaggccagcaatagcaccagcatctatggtggcctttcgctgagaatcattgaagtaagccggc----acagta |
13333262 |
T |
|
| Q |
201 |
acaactgcatttttaactggggattccaaatacatctctgcaatctctctcatatttgtgaggactattgatgaaatttcctcggcacggaggagtttct |
300 |
Q |
| |
|
||||| ||||| || ||||| || ||| ||| |||||||| ||||| ||| ||||| ||||| || ||||| ||||||||||||| | | | |||| |
|
|
| T |
13333261 |
acaacggcattcttgactggtgaccccatatatgcctctgcaacctctcgcatctttgtaaggaccatagatgatatttcctcggcacaaaagtgcttct |
13333162 |
T |
|
| Q |
301 |
cctggcccttgaacttaagggaaatcatgggtttgtcattaacaccagaaacaaccttgaatggccacaacaatatatctttttgaacaacagggtcgct |
400 |
Q |
| |
|
| || |||||| ||||| || |||||| || ||||| || ||||||||| |||||||||||||||||||| |||||| ||||||||||| || || || |
|
|
| T |
13333161 |
cttgacccttgcacttagcggtaatcataggcttgtcgttgacaccagaagtaaccttgaatggccacaacattatatcattttgaacaaccggatcact |
13333062 |
T |
|
| Q |
401 |
aaatttcctaccaattaacct |
421 |
Q |
| |
|
||| ||||||||||||||||| |
|
|
| T |
13333061 |
aaacttcctaccaattaacct |
13333041 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 421
Target Start/End: Original strand, 8667586 - 8668002
Alignment:
| Q |
1 |
cacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctgctgcagtg |
100 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||||||||| | | ||||||| | |||||| ||||| ||||||||||||||||| ||||| |
|
|
| T |
8667586 |
cacatcaaaagtcccgccacccagatcaaagacaaaaatatttcggctaccatcacagtcatttctcttgtcaaggccatatgcaatagctgccgcagta |
8667685 |
T |
|
| Q |
101 |
ggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagcaggcacatacagtg |
200 |
Q |
| |
|
|| ||||| ||||| | || |||||||| |||||||| | ||||||||| || ||||| |||||||| | ||||||||| ||||| |||||| || |
|
|
| T |
8667686 |
ggttcattgattatccgaatgacattaagtccagcaatagtaccagcatctatggtggcctttcgctgagaatcattgaagtaagctggcaca----gta |
8667781 |
T |
|
| Q |
201 |
acaactgcatttttaactggggattccaaatacatctctgcaatctctctcatatttgtgaggactattgatgaaatttcctcggcacggaggagtttct |
300 |
Q |
| |
|
||||| ||||| || || || || ||| ||| ||| |||| ||||| ||| ||||| || || || || || |||||||| |||| | | | |||| |
|
|
| T |
8667782 |
acaacggcattcttgaccggcgaccccagatatgcctccgcaacctctcgcatctttgtaagcaccatagaagatatttcctcagcacaaaagtgcttct |
8667881 |
T |
|
| Q |
301 |
cctggcccttgaacttaagggaaatcatgggtttgtcattaacaccagaaacaaccttgaatggccacaacaatatatctttttgaacaacagggtcgct |
400 |
Q |
| |
|
| || |||||| |||||| | |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| ||||| || |
|
|
| T |
8667882 |
cttgacccttgtacttaacagtaatcataggtttgtcattaacaccagaaataaccttgaatggccacaacaatatatctctttgaacaacggggtcact |
8667981 |
T |
|
| Q |
401 |
aaatttcctaccaattaacct |
421 |
Q |
| |
|
||| ||||||||||||||||| |
|
|
| T |
8667982 |
aaacttcctaccaattaacct |
8668002 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 1 - 421
Target Start/End: Complemental strand, 10494375 - 10493959
Alignment:
| Q |
1 |
cacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctgctgcagtg |
100 |
Q |
| |
|
|||||||||||| |||||||| |||||||||||||||||||| | | | | ||||| || |||||| ||||| ||||||||||||||||| ||||| |
|
|
| T |
10494375 |
cacatcaaaagtaccaccacccagatcaaagacaaaaatatttcggttaccctcacaatcacttctcttgtcaaggccatatgcaatagctgcagcagta |
10494276 |
T |
|
| Q |
101 |
ggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagcaggcacatacagtg |
200 |
Q |
| |
|
|| ||||| ||||| | || |||||||| |||||||| ||||||||||| ||||| || ||||| || | ||| ||||| ||||| |||||| || |
|
|
| T |
10494275 |
ggttcattgattatccgaatgacattaaggccagcaatagcaccagcatcaatagtagcctttcgttgagaatcgttgaagtaagccggcaca----gta |
10494180 |
T |
|
| Q |
201 |
acaactgcatttttaactggggattccaaatacatctctgcaatctctctcatatttgtgaggactattgatgaaatttcctcggcacggaggagtttct |
300 |
Q |
| |
|
||||| ||||| || ||||| || ||||||| |||||||| ||||| ||| ||| | ||||| || ||||| ||||||||||||| | | | |||| |
|
|
| T |
10494179 |
acaacagcattcttgactggtgaccccaaatatgcctctgcaacctctcgcatctttataaggaccatagatgatatttcctcggcacaaaagtgcttct |
10494080 |
T |
|
| Q |
301 |
cctggcccttgaacttaagggaaatcatgggtttgtcattaacaccagaaacaaccttgaatggccacaacaatatatctttttgaacaacagggtcgct |
400 |
Q |
| |
|
| || |||||| ||||| || |||||| ||||||||||| ||||| ||| |||||||||||||||||||| |||||| ||||||||||| || || || |
|
|
| T |
10494079 |
cttgacccttgtacttagcggtaatcataggtttgtcattgacacctgaagtaaccttgaatggccacaacattatatcgttttgaacaaccggatcact |
10493980 |
T |
|
| Q |
401 |
aaatttcctaccaattaacct |
421 |
Q |
| |
|
||| ||||| ||||||||||| |
|
|
| T |
10493979 |
aaacttcctgccaattaacct |
10493959 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 64 - 421
Target Start/End: Original strand, 3147502 - 3147855
Alignment:
| Q |
64 |
tctcttctcaagtccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggctttt |
163 |
Q |
| |
|
|||||| || |||||||| ||||||||||| ||||| || ||||| ||||| | ||||| |||||| |||||||| |||||||||| || || ||||| |
|
|
| T |
3147502 |
tctcttgtccagtccatacgcaatagctgcagcagtaggttcattgattatccgcataatattaaggccagcaataacaccagcatctattgtcgctttc |
3147601 |
T |
|
| Q |
164 |
cgctgtgcatcattgaaataagcaggcacatacagtgacaactgcatttttaactggggattccaaatacatctctgcaatctctctcatatttgtgagg |
263 |
Q |
| |
|
||||| |||||||||||||||||||| ||| || ||||||||||| || || || |||| ||| || ||||||| ||| | ||| ||||| || |
|
|
| T |
3147602 |
cgctgagcatcattgaaataagcagg----tacggtaacaactgcattcttgacaggcaattctaaaaactcctctgcagtcttgcgcatctttgttaga |
3147697 |
T |
|
| Q |
264 |
actattgatgaaatttcctcggcacggaggagtttctcctggcccttgaacttaagggaaatcatgggtttgtcattaacaccagaaacaaccttgaatg |
363 |
Q |
| |
|
|| || ||||| ||||| || |||| ||| | |||||||| |||||| |||||| |||||||||||||||||||| || || ||| |||||||||| |
|
|
| T |
3147698 |
accatagatgagatttcttcagcacataggtgcttctcctgtcccttgcacttaaccgaaatcatgggtttgtcattcactccgcaaatgaccttgaatg |
3147797 |
T |
|
| Q |
364 |
gccacaacaatatatctttttgaacaacagggtcgctaaatttcctaccaattaacct |
421 |
Q |
| |
|
||||||||| ||||| ||||||||||||| || | ||| ||||||||||||||||| |
|
|
| T |
3147798 |
gccacaacatcatatcattttgaacaacagaatcaccaaacttcctaccaattaacct |
3147855 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 417
Target Start/End: Original strand, 17268106 - 17268518
Alignment:
| Q |
1 |
cacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctgctgcagtg |
100 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||| || || |||| || |||||| |||| ||||||||||||||||| ||||| |
|
|
| T |
17268106 |
cacatcaaaagtcccaccaccaaggtcaaagacaaaaatattccgttcttcaacacagttagttctcttgccaaggccatatgcaatagctgcagcagtt |
17268205 |
T |
|
| Q |
101 |
ggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagcaggcacatacagtg |
200 |
Q |
| |
|
|| ||||| |||| ||| |||||||| ||||||||| |||||||||| || |||||||||||||| | ||| ||||| ||||| || ||| || |
|
|
| T |
17268206 |
ggttcattgattaccttcaatacattaaggccagcaatgacaccagcatctatggtggcttttcgctgagaatcgttgaagtaagccgggaca----gta |
17268301 |
T |
|
| Q |
201 |
acaactgcatttttaactggggattccaaatacatctctgcaatctctctcatatttgtgaggactattgatgaaatttcctcggcacggaggagtttct |
300 |
Q |
| |
|
| || ||||| |||| | ||||| | ||| ||| |||||||| | ||| |||||||| || || || ||||||||||| |||| | | |||||| |
|
|
| T |
17268302 |
atgacagcattcataaccgatgattctagatattcctcagcaatctcccgcatctttgtgagtaccatagacgaaatttcctctgcacaaaagtgtttct |
17268401 |
T |
|
| Q |
301 |
cctggcccttgaacttaagggaaatcatgggtttgtcattaacaccagaaacaaccttgaatggccacaacaatatatctttttgaacaacagggtcgct |
400 |
Q |
| |
|
|| | |||||| |||| ||||||||||| ||||||||||| | | | | || ||||||||||||||| ||| |||||||||||| || ||||| || || |
|
|
| T |
17268402 |
cccgtcccttgtacttgagggaaatcattggtttgtcattcatatccgcaatgaccttgaatggccacgacattatatctttttggaccacaggatcact |
17268501 |
T |
|
| Q |
401 |
aaatttcctaccaatta |
417 |
Q |
| |
|
||| ||||||||||||| |
|
|
| T |
17268502 |
aaacttcctaccaatta |
17268518 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 2 - 288
Target Start/End: Original strand, 8602142 - 8602424
Alignment:
| Q |
2 |
acatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctgctgcagtgg |
101 |
Q |
| |
|
||||||||||| ||||||||||||||||| | |||||||| ||||| || |||| || ||||||| | ||| |||||||||| ||| |||||||| | |
|
|
| T |
8602142 |
acatcaaaagttccaccaccaagatcaaatatgaaaatatttctctcttcaacacaattagctctcttttgaaggccatatgcaagagcagctgcagttg |
8602241 |
T |
|
| Q |
102 |
gctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagcaggcacatacagtga |
201 |
Q |
| |
|
||||||| ||||| | ||| ||||| ||||||||||||||||||||||| | |||||||||||||| | |||||| |||||||| ||| ||||| | |
|
|
| T |
8602242 |
gctcattgattatccgcattacattgagaccagcaatggcaccagcatcttttgtggcttttcgctgagaatcattaaaataagccggc----acagtaa |
8602337 |
T |
|
| Q |
202 |
caactgcatttttaactggggattccaaatacatctctgcaatctctctcatatttgtgaggactattgatgaaatttcctcggcac |
288 |
Q |
| |
|
|||||||||| || || || || |||| | || |||||||||| || | ||| ||||| ||||| |||||||| |||||||| |||| |
|
|
| T |
8602338 |
caactgcattcttgacaggtgactccagaaacttctctgcaatttcacgcatctttgtaaggaccattgatgagatttcctcagcac |
8602424 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 421
Target Start/End: Original strand, 8654617 - 8655033
Alignment:
| Q |
1 |
cacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctgctgcagtg |
100 |
Q |
| |
|
|||||||||||| ||||||||||||||||| || |||||||||| | | ||||| | ||| || ||| ||||| ||||||||||||||||| ||||| |
|
|
| T |
8654617 |
cacatcaaaagtaccaccaccaagatcaaataccaaaatattccgtttaccatcatagttacttcgcttgtcaaggccatatgcaatagctgcggcagta |
8654716 |
T |
|
| Q |
101 |
ggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagcaggcacatacagtg |
200 |
Q |
| |
|
|| ||||| | ||| | || || ||||| |||||||||||||||||||| || || ||||||||||| | |||||||| || || ||| ||||| |
|
|
| T |
8654717 |
ggttcattgagtatccgaatgacgttaagtccagcaatggcaccagcatctatggttgcttttcgctgagagtcattgaagtatgccggc----acagta |
8654812 |
T |
|
| Q |
201 |
acaactgcatttttaactggggattccaaatacatctctgcaatctctctcatatttgtgaggactattgatgaaatttcctcggcacggaggagtttct |
300 |
Q |
| |
|
||||| ||||||| || || ||| | | || |||||||||||||| ||| ||||| || || ||||| |||||||| |||| | | |||| |
|
|
| T |
8654813 |
acaacgacatttttgacgggtgatccaaggtatgcctctgcaatctctcgcatctttgtaagaaccgcagatgatatttcctcagcacaaaattgcttct |
8654912 |
T |
|
| Q |
301 |
cctggcccttgaacttaagggaaatcatgggtttgtcattaacaccagaaacaaccttgaatggccacaacaatatatctttttgaacaacagggtcgct |
400 |
Q |
| |
|
| || || ||| |||||| | |||||||||||||||||||||||||||| |||| ||||||||||||||| ||||| |||||||||| ||| || || |
|
|
| T |
8654913 |
cttgacctttgtacttaacagtaatcatgggtttgtcattaacaccagaagtaaccatgaatggccacaacatgatatccttttgaacaataggatcact |
8655012 |
T |
|
| Q |
401 |
aaatttcctaccaattaacct |
421 |
Q |
| |
|
| | ||||||||||||||||| |
|
|
| T |
8655013 |
atacttcctaccaattaacct |
8655033 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 418
Target Start/End: Original strand, 8659530 - 8659943
Alignment:
| Q |
1 |
cacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctgctgcagtg |
100 |
Q |
| |
|
|||||||||||| |||||||||||||||||||| |||||||| | | ||||||| ||||||||| |||| ||||||||||||||||| ||||| |
|
|
| T |
8659530 |
cacatcaaaagtaccaccaccaagatcaaagaccaaaatattttgtttaccatcacagtcacctctcttgtcaaaaccatatgcaatagctgcagcagta |
8659629 |
T |
|
| Q |
101 |
ggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagcaggcacatacagtg |
200 |
Q |
| |
|
|| ||||||||||| || |||||||| |||||||||||||| | ||| || |||||||||||||| | ||||||||| || |||||| || || |
|
|
| T |
8659630 |
ggttcattaattatctgaatgacattaaggccagcaatggcaccggaatctatggtggcttttcgctgagaatcattgaactatgcaggc----actgta |
8659725 |
T |
|
| Q |
201 |
acaactgcatttttaactggggattccaaatacatctctgcaatctctctcatatttgtgaggactattgatgaaatttcctcggcacggaggagtttct |
300 |
Q |
| |
|
||||| ||||| || || || || | ||| ||||||||| |||| ||| ||||| || || || ||||| |||||||| |||| | | | |||| |
|
|
| T |
8659726 |
acaacagcattcttcacaggtgacattagatatgtctctgcaacttctcgcatttttgtaagtaccatagatgatatttcctccgcacaaaagtgcttct |
8659825 |
T |
|
| Q |
301 |
cctggcccttgaacttaagggaaatcatgggtttgtcattaacaccagaaacaaccttgaatggccacaacaatatatctttttgaacaacagggtcgct |
400 |
Q |
| |
|
|||| |||||| ||| || ||||||| ||||||| || ||||||| | |||||||||||||||||||| || |||||||||||||| | || || |
|
|
| T |
8659826 |
cctgacccttgtactgaacattaatcatgagtttgtcgttcacaccagcgataaccttgaatggccacaacatcatgtctttttgaacaactgaatcact |
8659925 |
T |
|
| Q |
401 |
aaatttcctaccaattaa |
418 |
Q |
| |
|
||| |||||||||||||| |
|
|
| T |
8659926 |
aaacttcctaccaattaa |
8659943 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 1 - 421
Target Start/End: Complemental strand, 27830876 - 27830460
Alignment:
| Q |
1 |
cacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctgctgcagtg |
100 |
Q |
| |
|
|||||||||||||||||||||||| ||||| ||||||||||||| || || | | | || | | ||||| ||||||||||||||||| ||||| |
|
|
| T |
27830876 |
cacatcaaaagtcccaccaccaaggtcaaacacaaaaatattccgttctccagtatattttgttcccgtgtcaaggccatatgcaatagctgcagcagta |
27830777 |
T |
|
| Q |
101 |
ggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagcaggcacatacagtg |
200 |
Q |
| |
|
||||| | ||||| | |||||||||||| |||||||||||||| | ||| | |||||||||||| || | |||||||||||||| ||| || || |
|
|
| T |
27830776 |
ggctcgcttattatccgcataacattaaggccagcaatggcaccggaatctacagtggcttttcgttgagagtcattgaaataagctggc----acggtt |
27830681 |
T |
|
| Q |
201 |
acaactgcatttttaactggggattccaaatacatctctgcaatctctctcatatttgtgaggactattgatgaaatttcctcggcacggaggagtttct |
300 |
Q |
| |
|
| |||||||| ||||| || |||| |||||| ||| || ||||||| ||| ||||| ||||| ||||||||||||||||| |||| | | |||||| |
|
|
| T |
27830680 |
attactgcattcttaaccggtgattgcaaatatgcctccgcgatctctcgcatctttgtaaggaccattgatgaaatttcctccgcacataagtgtttct |
27830581 |
T |
|
| Q |
301 |
cctggcccttgaacttaagggaaatcatgggtttgtcattaacaccagaaacaaccttgaatggccacaacaatatatctttttgaacaacagggtcgct |
400 |
Q |
| |
|
|||| | |||| |||||| || ||||||||||| || ||| ||| || || |||||| ||||||| ||||||||||||||||||| ||||| |
|
|
| T |
27830580 |
cctgactcttgtacttaacaacaaacatgggtttgttgtttacatcagtaatgactttgaatagccacaagtttatatctttttgaacaacatcatcgct |
27830481 |
T |
|
| Q |
401 |
aaatttcctaccaattaacct |
421 |
Q |
| |
|
|| ||||||||||||||||| |
|
|
| T |
27830480 |
gaacttcctaccaattaacct |
27830460 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 64 - 419
Target Start/End: Complemental strand, 8671568 - 8671217
Alignment:
| Q |
64 |
tctcttctcaagtccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggctttt |
163 |
Q |
| |
|
|||||| ||||| ||||||||||||||||| ||||| || ||||| ||||| | || |||||||| |||||||| | ||||||||| || ||||| || |
|
|
| T |
8671568 |
tctcttgtcaaggccatatgcaatagctgcagcagtaggttcattgattatccgaatgacattaagtccagcaatagtaccagcatcaatggtggccgtt |
8671469 |
T |
|
| Q |
164 |
cgctgtgcatcattgaaataagcaggcacatacagtgacaactgcatttttaactggggattccaaatacatctctgcaatctctctcatatttgtgagg |
263 |
Q |
| |
|
||||| | ||||||||| ||||| ||||| || ||||| ||||| || || || || |||| ||| ||| |||| ||||| ||| ||||| || |
|
|
| T |
8671468 |
cgctgagaatcattgaagtaagctggcacg----gtaacaacggcattcttgaccggtgactccagatatgcctccgcaacctctcgcatctttgtaagc |
8671373 |
T |
|
| Q |
264 |
actattgatgaaatttcctcggcacggaggagtttctcctggcccttgaacttaagggaaatcatgggtttgtcattaacaccagaaacaaccttgaatg |
363 |
Q |
| |
|
|| || || || |||||||| |||| | | ||||| | || | | |||| | | |||||| |||||||||||||||||||||| ||||||||||| |
|
|
| T |
8671372 |
accatagaagatatttcctcagcacaaaattgcttctctagaccttcgtacttgacagtaatcataggtttgtcattaacaccagaaataaccttgaatg |
8671273 |
T |
|
| Q |
364 |
gccacaacaatatatctttttgaacaacagggtcgctaaatttcctaccaattaac |
419 |
Q |
| |
|
||||||||||||||||| |||||||||| || || ||||| ||||||||||||||| |
|
|
| T |
8671272 |
gccacaacaatatatctctttgaacaaccggatcactaaacttcctaccaattaac |
8671217 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 64 - 421
Target Start/End: Original strand, 6789742 - 6790095
Alignment:
| Q |
64 |
tctcttctcaagtccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggctttt |
163 |
Q |
| |
|
|||||| ||||| |||||||||| ||| || || || || ||||| ||||||| |||||||||||||||||||||||||||||||| | ||||||||| |
|
|
| T |
6789742 |
tctcttatcaaggccatatgcaagagcagcagctgttggttcattgattattcgtataacattaagaccagcaatggcaccagcatctaaagtggctttc |
6789841 |
T |
|
| Q |
164 |
cgctgtgcatcattgaaataagcaggcacatacagtgacaactgcatttttaactggggattccaaatacatctctgcaatctctctcatatttgtgagg |
263 |
Q |
| |
|
|| || | ||||||||||||||||||| ||||| | |||||||||||| | || | |||||| |||| |||||||| | ||| || |||||| |
|
|
| T |
6789842 |
cgttgagaatcattgaaataagcaggc----acagtaataactgcattttttatctctgactgcaaatatttctcagcaatctcccgcatcttggtgagg |
6789937 |
T |
|
| Q |
264 |
actattgatgaaatttcctcggcacggaggagtttctcctggcccttgaacttaagggaaatcatgggtttgtcattaacaccagaaacaaccttgaatg |
363 |
Q |
| |
|
| || || |||| |||||| ||| || | ||||||| ||||| ||| || ||||||||| |||||||| || |||| || |||||||||| |
|
|
| T |
6789938 |
atcatagacgaaacttcctcaacacatagttgcttctcctcacccttatactcaacaacaatcatgggcttgtcattgacgccagcaatgaccttgaatg |
6790037 |
T |
|
| Q |
364 |
gccacaacaatatatctttttgaacaacagggtcgctaaatttcctaccaattaacct |
421 |
Q |
| |
|
|||| |||| ||||| ||||||||||||| || ||||| ||||||||||||||||| |
|
|
| T |
6790038 |
gccaaaacatcatatcattttgaacaacagaatcactaaacttcctaccaattaacct |
6790095 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 414
Target Start/End: Original strand, 17260408 - 17260817
Alignment:
| Q |
1 |
cacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctgctgcagtg |
100 |
Q |
| |
|
||||||||||||||| |||||||| ||||||||||||||||||| | | |||| || |||||| |||| ||||||||||||||||| ||| | |
|
|
| T |
17260408 |
cacatcaaaagtccccccaccaaggtcaaagacaaaaatattccgtacttaaacacaattagttctcttgacaaggccatatgcaatagctgcagcaata |
17260507 |
T |
|
| Q |
101 |
ggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagcaggcacatacagtg |
200 |
Q |
| |
|
|| |||||||||| ||| ||||| ||| |||||||| |||||||||| || |||||||||||||| | |||||||||||||||||| ||||| |
|
|
| T |
17260508 |
ggttcattaattaacttcaaaacataaaggccagcaataacaccagcatctatggtggcttttcgctgagaatcattgaaataagcagg----aacagta |
17260603 |
T |
|
| Q |
201 |
acaactgcatttttaactggggattccaaatacatctctgcaatctctctcatatttgtgaggactattgatgaaatttcctcggcacggaggagtttct |
300 |
Q |
| |
|
| ||| |||| |||| | ||||| | ||| | ||| |||||||| | ||| || || || || || || |||||||| |||| | | |||||| |
|
|
| T |
17260604 |
ataacaacattaataaccgatgattcaagatatacctcagcaatctcccgcatcttcacaagtaccatagacgagatttcctctgcacaaaagtgtttct |
17260703 |
T |
|
| Q |
301 |
cctggcccttgaacttaagggaaatcatgggtttgtcattaacaccagaaacaaccttgaatggccacaacaatatatctttttgaacaacagggtcgct |
400 |
Q |
| |
|
|| | |||||| |||| ||||||||||| ||||||||||| | | | | || ||||||||||||||| ||| |||||||||||| || ||||| || || |
|
|
| T |
17260704 |
cccgtcccttgtacttgagggaaatcattggtttgtcattcatatccgcaatgaccttgaatggccacgacattatatctttttggaccacaggatcact |
17260803 |
T |
|
| Q |
401 |
aaatttcctaccaa |
414 |
Q |
| |
|
||| |||||||||| |
|
|
| T |
17260804 |
aaacttcctaccaa |
17260817 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 8382877 - 8382686
Alignment:
| Q |
1 |
cacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctgctgcagtg |
100 |
Q |
| |
|
|||||||||||| ||||||||||||||||||| |||||||| ||||| || ||| || ||||||||| ||| |||||||||| ||| || ||||| |
|
|
| T |
8382877 |
cacatcaaaagttccaccaccaagatcaaagatgaaaatatttctctcttcaagacaattagctctcttctgaaggccatatgcaagagcagcggcagtt |
8382778 |
T |
|
| Q |
101 |
ggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagcaggcac |
192 |
Q |
| |
|
|||||||| ||||| | ||| ||||| || |||||||| ||||||||||| | |||||||| || || | |||||||||||| |||||||| |
|
|
| T |
8382777 |
ggctcattgattatccgcattacattgaggccagcaatcgcaccagcatcttttgtggctttccgttgagaatcattgaaatatgcaggcac |
8382686 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 418
Target Start/End: Original strand, 1301627 - 1302044
Alignment:
| Q |
1 |
cacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctgctgcagtg |
100 |
Q |
| |
|
|||||||||||| ||||| ||||| |||||||| |||||||||| | | ||||||| || |||||| |||| ||||| ||||||||||| ||||| |
|
|
| T |
1301627 |
cacatcaaaagtaccaccgccaaggtcaaagaccaaaatattccgtttaccatcacagtcacttctcttgtcaaaaccatacgcaatagctgcagcagta |
1301726 |
T |
|
| Q |
101 |
g----gctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagcaggcacatac |
196 |
Q |
| |
|
| | ||||||||||| || |||||||| |||||||| ||||| ||||| || |||||||||||||| | ||||||||||| ||||||||| |
|
|
| T |
1301727 |
gctaggttcattaattatctgaatgacattaaggccagcaattgcaccggcatctatggtggcttttcgctgagaatcattgaaatgtgcaggcaca--- |
1301823 |
T |
|
| Q |
197 |
agtgacaactgcatttttaactggggattccaaatacatctctgcaatctctctcatatttgtgaggactattgatgaaatttcctcggcacggaggagt |
296 |
Q |
| |
|
|| ||||| |||||| | ||||| || | ||| |||||||||| |||| ||| || || ||||| || ||||| |||||||| | | | | | |
|
|
| T |
1301824 |
-gtaacaacagcatttgtcactggtgacattagatatgtctctgcaatttctcgcatcttcgtaaggaccatagatgatatttcctccacgcaaaagtgc |
1301922 |
T |
|
| Q |
297 |
ttctcctggcccttgaacttaagggaaatcatgggtttgtcattaacaccagaaacaaccttgaatggccacaacaatatatctttttgaacaacagggt |
396 |
Q |
| |
|
|||||||| |||||| |||||| ||||| |||||||||||| ||||| | | ||||||||||||||||||| || |||||||||||||| | | |
|
|
| T |
1301923 |
ttctcctgacccttgtacttaacaacaatcacgggtttgtcattcacaccggcgatgaccttgaatggccacaacatcatgtctttttgaacaactgaat |
1302022 |
T |
|
| Q |
397 |
cgctaaatttcctaccaattaa |
418 |
Q |
| |
|
| ||||| |||||||||||||| |
|
|
| T |
1302023 |
cactaaacttcctaccaattaa |
1302044 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 8570478 - 8570666
Alignment:
| Q |
1 |
cacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctgctgcagtg |
100 |
Q |
| |
|
|||||||||||| ||||| ||||| ||||||| ||||||||| |||| | || || | || ||||||| | ||| |||||||||| |||||| ||||| |
|
|
| T |
8570478 |
cacatcaaaagttccaccgccaaggtcaaagataaaaatatttctcttatcaacaaaattagctctcttttgaaggccatatgcaagagctgccgcagtc |
8570577 |
T |
|
| Q |
101 |
ggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagcagg |
189 |
Q |
| |
|
|| ||||| ||||| | ||| ||||| ||||||||||| |||| ||||| |||||||| |||| |||| |||||| ||||||||||| |
|
|
| T |
8570578 |
ggttcattgattatccgcattacattgagaccagcaatttcacctgcatctttagtggctcttcgttgtgaatcattaaaataagcagg |
8570666 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 8581867 - 8582055
Alignment:
| Q |
1 |
cacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctgctgcagtg |
100 |
Q |
| |
|
|||||||||||| ||||| ||||| ||||||| ||||||||| |||| | || |||| || ||||||| | ||| |||||||||| |||||| ||||| |
|
|
| T |
8581867 |
cacatcaaaagttccacctccaaggtcaaagataaaaatatttctcttatcaacacaattagctctcttttgaaggccatatgcaagagctgccgcagtc |
8581966 |
T |
|
| Q |
101 |
ggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagcagg |
189 |
Q |
| |
|
|| ||||| ||||| | ||| ||||| ||||| ||||| |||| ||||| |||||||| |||| |||| |||||| ||||||||||| |
|
|
| T |
8581967 |
ggttcattgattatccgcattacattgagacctgcaatttcacctgcatctttagtggctcttcgttgtgaatcattaaaataagcagg |
8582055 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 64 - 421
Target Start/End: Complemental strand, 7877671 - 7877318
Alignment:
| Q |
64 |
tctcttctcaagtccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggctttt |
163 |
Q |
| |
|
|||||| | ||| |||||||||| || || ||||| || ||||||||||| | ||||||||| || || |||| ||||||||||| | ||||||||| |
|
|
| T |
7877671 |
tctcttttgaaggccatatgcaagggcagcagcagttggttcattaattatccgcataacattgaggccggcaactgcaccagcatcttttgtggctttt |
7877572 |
T |
|
| Q |
164 |
cgctgtgcatcattgaaataagcaggcacatacagtgacaactgcatttttaactggggattccaaatacatctctgcaatctctctcatatttgtgagg |
263 |
Q |
| |
|
|| || | ||||||||||||||| ||| ||||| ||||||||||| || || || || |||||| || ||||||||||||| | ||| ||||| ||| |
|
|
| T |
7877571 |
cgttgagaatcattgaaataagccggc----acagtaacaactgcattcttgacaggtgactccaaaaacttctctgcaatctcgcgcatctttgtaagg |
7877476 |
T |
|
| Q |
264 |
actattgatgaaatttcctcggcacggaggagtttctcctggcccttgaactta--agggaaatcatgggtttgtcattaacaccagaaacaaccttgaa |
361 |
Q |
| |
|
| || ||||| ||||||||||||| | | | || |||| |||||| ||||| | || |||| || ||||||| | ||||| ||||||||| || |
|
|
| T |
7877475 |
atcatggatgatatttcctcggcacaaaagtgcttttcctcgcccttatacttaacaatgatatca--ggcttgtcatcagaaccagcaacaaccttaaa |
7877378 |
T |
|
| Q |
362 |
tggccacaacaatatatctttttgaacaacagggtcgctaaatttcctaccaattaacct |
421 |
Q |
| |
|
||||||||||| ||||| || |||| ||||| |||||| ||||||| ||||| ||||| |
|
|
| T |
7877377 |
tggccacaacagaatatcattctgaataacagaatcgctatatttccttccaatcaacct |
7877318 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 8576493 - 8576685
Alignment:
| Q |
1 |
cacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctgctgcagtg |
100 |
Q |
| |
|
|||||||||||| ||||| ||||| ||||||| ||||||||| || | | || |||| || ||||||| | ||| ||||| |||| |||||| ||||| |
|
|
| T |
8576493 |
cacatcaaaagttccaccgccaaggtcaaagataaaaatatttcttttatcaacacaattagctctcttttgaaggccatacgcaagagctgccgcagtc |
8576592 |
T |
|
| Q |
101 |
ggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagcaggcaca |
193 |
Q |
| |
|
|| ||||| ||||| ||| ||||| ||||||||||| ||||| ||||| |||||||| |||| || | |||||| ||||||||||||||| |
|
|
| T |
8576593 |
ggttcattgattatctgcatgacattgagaccagcaattgcacctgcatctttagtggctcttcgttgggaatcattaaaataagcaggcaca |
8576685 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 2 - 189
Target Start/End: Original strand, 8538204 - 8538391
Alignment:
| Q |
2 |
acatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctgctgcagtgg |
101 |
Q |
| |
|
||||||||||| ||||||||||||||||||| |||| || ||||| || |||| || ||||||| | ||| || ||||||| ||| || || || | |
|
|
| T |
8538204 |
acatcaaaagttccaccaccaagatcaaagatgaaaacttttctctcttcaacacaattagctctcttttgaaggccgtatgcaagagcagcagctgtag |
8538303 |
T |
|
| Q |
102 |
gctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagcagg |
189 |
Q |
| |
|
| ||||| ||||| | ||| ||||| || ||||||||| |||||||||| | |||||| ||||||||| |||||||||||||||||| |
|
|
| T |
8538304 |
gttcattgattatccgcattacattgaggccagcaatgacaccagcatctttggtggctcttcgctgtgaatcattgaaataagcagg |
8538391 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 14 - 193
Target Start/End: Complemental strand, 8636331 - 8636152
Alignment:
| Q |
14 |
ccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctgctgcagtgggctcattaatta |
113 |
Q |
| |
|
||||||||||||||||| || ||||| || ||||| | |||| |||||||||| | ||||||||| |||| |||||| ||||| || ||||| |||| |
|
|
| T |
8636331 |
ccaccaccaagatcaaatacgaaaatgtttctctctttaacacagttacctctcttttgaagtccatacgcaaaagctgcagcagttggttcattgatta |
8636232 |
T |
|
| Q |
114 |
ttctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagcaggcaca |
193 |
Q |
| |
|
| | || |||||||| || ||||||||||||||||| | |||| ||| ||||| | ||||||||||||||| |||||| |
|
|
| T |
8636231 |
tccgaattacattaaggccggcaatggcaccagcatctttggtggatttacgctgagaatcattgaaataagcgggcaca |
8636152 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 8610084 - 8610276
Alignment:
| Q |
1 |
cacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctgctgcagtg |
100 |
Q |
| |
|
|||||| ||||||||||||||||||||||||| ||||||||| || | | |||| || ||||||||| ||| |||||||||| ||| || || || |
|
|
| T |
8610084 |
cacatcgaaagtcccaccaccaagatcaaagataaaaatatttctattttccacacaattagctctcttctgaagaccatatgcaagagccgcagccgtt |
8610183 |
T |
|
| Q |
101 |
ggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagcaggcaca |
193 |
Q |
| |
|
|| ||||| || || | || |||||||| |||| |||| |||||||||| | |||||||| ||||| | |||||| ||||||||||||||| |
|
|
| T |
8610184 |
ggttcattgataatccggattacattaaggccagaaatgacaccagcatcttttgtggctttccgctgagaatcattaaaataagcaggcaca |
8610276 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 2 - 189
Target Start/End: Original strand, 8559501 - 8559688
Alignment:
| Q |
2 |
acatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctgctgcagtgg |
101 |
Q |
| |
|
||||||||||| |||||||| |||||||||| |||||||| ||||| | |||| || |||||| | |||||||||||||| ||| |||||||| | |
|
|
| T |
8559501 |
acatcaaaagttccaccaccgagatcaaagatgaaaatatttctctctttaacacaattagatctcttttgaagtccatatgcaagagcagctgcagttg |
8559600 |
T |
|
| Q |
102 |
gctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagcagg |
189 |
Q |
| |
|
| ||||| ||||| ||| ||||||||||||||||| |||| ||||| | |||||| ||| || | |||||| ||||||||||| |
|
|
| T |
8559601 |
gttcattgattatctgcattacattaagaccagcaatttcacctgcatctttggtggctcttctttgagaatcattaaaataagcagg |
8559688 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 124 - 288
Target Start/End: Original strand, 8647167 - 8647327
Alignment:
| Q |
124 |
attaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagcaggcacatacagtgacaactgcatttttaactgggga |
223 |
Q |
| |
|
|||||| ||||||||||| || ||||| ||||||||||||||||| ||||||||| || |||||| ||||| ||||||||||| || || ||||| |
|
|
| T |
8647167 |
attaaggccagcaatggccccggcatctatagtggcttttcgctgataatcattgaagtatgcaggc----acagtaacaactgcattctttacagggga |
8647262 |
T |
|
| Q |
224 |
ttccaaatacatctctgcaatctctctcatatttgtgaggactattgatgaaatttcctcggcac |
288 |
Q |
| |
|
||||| ||||||||| ||||| ||| |||||||||| || ||||| |||||||| |||| |
|
|
| T |
8647263 |
cattaaatatttctctgcaacctctcgcatctttgtgaggatcatcgatgatatttcctcagcac |
8647327 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 83 - 189
Target Start/End: Original strand, 8102916 - 8103022
Alignment:
| Q |
83 |
gcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaat |
182 |
Q |
| |
|
|||||||| || ||||| ||||||||||| ||||||| |||||| | |||||| || |||||||||| |||| |||| ||||| | ||||||||| | |
|
|
| T |
8102916 |
gcaatagcagcagcagttggctcattaataattctcaaaacatttaaaccagcgataacaccagcatctttagttgcttgacgctgagaatcattgaagt |
8103015 |
T |
|
| Q |
183 |
aagcagg |
189 |
Q |
| |
|
||||||| |
|
|
| T |
8103016 |
aagcagg |
8103022 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 95 - 288
Target Start/End: Original strand, 8590899 - 8591088
Alignment:
| Q |
95 |
gcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagcaggcacat |
194 |
Q |
| |
|
||||| || ||||||||||| | ||| ||||| | ||||||||| |||||||||| | || ||||| | ||| | |||||| |||||||| |||||| |
|
|
| T |
8590899 |
gcagttggttcattaattatccgcattacattcaagccagcaatgacaccagcatctttggtagctttcctctgagaatcattaaaataagctggcaca- |
8590997 |
T |
|
| Q |
195 |
acagtgacaactgcatttttaactggggattccaaatacatctctgcaatctctctcatatttgtgaggactattgatgaaatttcctcggcac |
288 |
Q |
| |
|
|| ||||||||||| || || || || |||||| || | || |||||||||| ||| |||||||| || || ||||| |||||||| |||| |
|
|
| T |
8590998 |
---gtaacaactgcattcttgacaggtgactccaaaaacttttcagcaatctctcgcatctttgtgagaaccatggatgagatttcctccgcac |
8591088 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 71 - 186
Target Start/End: Complemental strand, 8017344 - 8017229
Alignment:
| Q |
71 |
tcaagtccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtg |
170 |
Q |
| |
|
|||||||| || ||||||||||| || || ||||| || || ||||||| |||||| || || |||||| |||| |||||| | ||||||| ||||| | |
|
|
| T |
8017344 |
tcaagtccgtacgcaatagctgcagctgttggctcgttgataattctcaaaacattgagtcctgcaatgacaccggcatcctttgtggcttgacgctgcg |
8017245 |
T |
|
| Q |
171 |
catcattgaaataagc |
186 |
Q |
| |
|
||||||||| ||||| |
|
|
| T |
8017244 |
aatcattgaagtaagc |
8017229 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 192
Target Start/End: Complemental strand, 29581688 - 29581651
Alignment:
| Q |
155 |
gtggcttttcgctgtgcatcattgaaataagcaggcac |
192 |
Q |
| |
|
|||||||||||||| | ||||||||||||||||||||| |
|
|
| T |
29581688 |
gtggcttttcgctgagaatcattgaaataagcaggcac |
29581651 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 151
Target Start/End: Original strand, 39985878 - 39985963
Alignment:
| Q |
66 |
tcttctcaagtccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatcc |
151 |
Q |
| |
|
|||| ||||| ||||| ||||| || || |||||||||||||| || |||| ||| ||||||||||| ||||| | ||||||||| |
|
|
| T |
39985878 |
tcttgtcaagaccataagcaatggcagcagcagtgggctcattgataattcgcatgacattaagaccggcaataactccagcatcc |
39985963 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 124; Significance: 1e-63; HSPs: 5)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 1 - 421
Target Start/End: Complemental strand, 34466794 - 34466378
Alignment:
| Q |
1 |
cacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctgctgcagtg |
100 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| |||||||| | || | || | | ||||||| ||||||||||||||||||||||| |||||| |
|
|
| T |
34466794 |
cacatcaaaagtcccaccaccaaggtcaaagacgaaaatatttccttcttccacaaagtcagctctcttgtcaagtccatatgcaatagctgcagcagtg |
34466695 |
T |
|
| Q |
101 |
ggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagcaggcacatacagtg |
200 |
Q |
| |
|
|| ||||| |||||| || ||||||||| |||||||| | ||||||||||| ||| ||||||||||| | |||||| |||||||||||||| ||| |
|
|
| T |
34466694 |
ggttcattgattatttgcaaaacattaaggccagcaatagtaccagcatccacagtagcttttcgctgagaatcattaaaataagcaggcacg----gtg |
34466599 |
T |
|
| Q |
201 |
acaactgcatttttaactggggattccaaatacatctctgcaatctctctcatatttgtgaggactattgatgaaatttcctcggcacggaggagtttct |
300 |
Q |
| |
|
| ||||||||| |||| ||| ||||||||||| ||||||| | || | ||| |||| |||| || ||||| |||||||| |||| ||| | |||| |
|
|
| T |
34466598 |
ataactgcattcttaattggtgattccaaatattcctctgcagtatcccgcatctttgaaaggatcatagatgagatttcctcagcacataggtgcttct |
34466499 |
T |
|
| Q |
301 |
cctggcccttgaacttaagggaaatcatgggtttgtcattaacaccagaaacaaccttgaatggccacaacaatatatctttttgaacaacagggtcgct |
400 |
Q |
| |
|
|||| ||||| |||||||||||||||| || |||||||||||||||| || ||| ||||||||||| |||| |||||| |||||||| |||| || || |
|
|
| T |
34466498 |
cctgacccttatacttaagggaaatcattggcttgtcattaacaccagcaataactttgaatggccataacatcatatctgtttgaacatcaggatcact |
34466399 |
T |
|
| Q |
401 |
aaatttcctaccaattaacct |
421 |
Q |
| |
|
|||||| || ||||||||||| |
|
|
| T |
34466398 |
aaattttctgccaattaacct |
34466378 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 15595201 - 15595399
Alignment:
| Q |
1 |
cacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctgctgcagtg |
100 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||| || || || |||| || ||||| ||||| ||||||||||||||||| || || |
|
|
| T |
15595201 |
cacatcaaaagtgccaccaccaagatcaaagacaaaaatatttctttctccaacacagttaatcctcttgtcaaggccatatgcaatagctgcagctgtc |
15595300 |
T |
|
| Q |
101 |
ggct-------cattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagcaggcac |
192 |
Q |
| |
|
||| |||| |||| | ||||||||||| |||||||||||||| ||||| |||||||||||||| || | |||||||| |||||||||||| |
|
|
| T |
15595301 |
agctgtcggttcattgattacccgtataacattaaggccagcaatggcacctgcatctatagtggcttttcgttgagaatcattgagataagcaggcac |
15595399 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 4678559 - 4678367
Alignment:
| Q |
1 |
cacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctgctgcagtg |
100 |
Q |
| |
|
|||||||||||| ||||||||||| ||||||||||| ||||| | | | ||||| || |||||| |||| ||||||||||||||||| |||| |
|
|
| T |
4678559 |
cacatcaaaagtaccaccaccaaggtcaaagacaaatatatttcgtttacaatcactttcacttctcttgtcaaaaccatatgcaatagctgcaacagta |
4678460 |
T |
|
| Q |
101 |
ggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagcaggcaca |
193 |
Q |
| |
|
|| || || |||||| || |||||||| |||||||||||||||||||| || || |||||||| || | ||||||||| || ||||||||| |
|
|
| T |
4678459 |
ggttcgttgattatttgaatgacattaagtccagcaatggcaccagcatctatggtagcttttcgttgagaatcattgaagtatgcaggcaca |
4678367 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 354 - 421
Target Start/End: Complemental strand, 52549172 - 52549105
Alignment:
| Q |
354 |
accttgaatggccacaacaatatatctttttgaacaacagggtcgctaaatttcctaccaattaacct |
421 |
Q |
| |
|
|||||||||| ||| ||||||||||| | |||||||||||| || ||||| ||| ||||||||||||| |
|
|
| T |
52549172 |
accttgaatgaccataacaatatatcatcttgaacaacaggatcactaaacttcttaccaattaacct |
52549105 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 323 - 390
Target Start/End: Original strand, 15595524 - 15595588
Alignment:
| Q |
323 |
aatcatgggtttgtcattaacaccagaaacaaccttgaatggccacaacaatatatctttttgaacaa |
390 |
Q |
| |
|
|||||||||||||||||| |||||| | |||||||||||||||||| |||||| |||||||||| |
|
|
| T |
15595524 |
aatcatgggtttgtcattcacacca---atgaccttgaatggccacaactttatatcattttgaacaa |
15595588 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 89; Significance: 1e-42; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 76 - 421
Target Start/End: Original strand, 28220193 - 28220534
Alignment:
| Q |
76 |
tccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatca |
175 |
Q |
| |
|
||||||||||||||| || |||||||| ||||| | ||| || | |||||| ||||||||||||| ||| ||||| || |||||||| ||||| |||| |
|
|
| T |
28220193 |
tccatatgcaatagcagcagcagtgggttcattgactatccttagaacatttagaccagcaatggtacctgcatctatggtggctttccgctgataatca |
28220292 |
T |
|
| Q |
176 |
ttgaaataagcaggcacatacagtgacaactgcatttttaactggggattccaaatacatctctgcaatctctctcatatttgtgaggactattgatgaa |
275 |
Q |
| |
|
||||||||||||||| ||||| | ||||||||| || || || |||||||| | |||||||||||| | ||| ||||| || || || ||||| |
|
|
| T |
28220293 |
ttgaaataagcaggc----acagtaataactgcattcttgacaggaaattccaaaaaggcctctgcaatctcacgcatctttgttagaaccatagatgag |
28220388 |
T |
|
| Q |
276 |
atttcctcggcacggaggagtttctcctggcccttgaacttaagggaaatcatgggtttgtcattaacaccagaaacaaccttgaatggccacaacaata |
375 |
Q |
| |
|
||||| ||||||| ||| | |||||||| |||||| |||||| ||||||||||||||||| || || |||| |||||||||||||||||| || |
|
|
| T |
28220389 |
atttcttcggcacataggtgcttctcctgtcccttgtacttaacagaaatcatgggtttgtcgttcgttccggaaatgaccttgaatggccacaacttta |
28220488 |
T |
|
| Q |
376 |
tatctttttgaacaacagggtcgctaaatttcctaccaattaacct |
421 |
Q |
| |
|
|||| | ||||||||||| ||| ||||| ||||||||||||||||| |
|
|
| T |
28220489 |
tatcatcttgaacaacagagtcactaaacttcctaccaattaacct |
28220534 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 86; Significance: 6e-41; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 64 - 421
Target Start/End: Original strand, 43745079 - 43745430
Alignment:
| Q |
64 |
tctcttctcaagtccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggctttt |
163 |
Q |
| |
|
|||||| || || ||||||||||||||||| |||||||| ||||| ||||| ||||||||| ||| |||||||||||||||||||| |||||||||| |
|
|
| T |
43745079 |
tctcttttccagaccatatgcaatagctgcagcagtgggttcattgattatcttcataacatcaagcccagcaatggcaccagcatc--tagtggctttc |
43745176 |
T |
|
| Q |
164 |
cgctgtgcatcattgaaataagcaggcacatacagtgacaactgcatttttaactggggattccaaatacatctctgcaatctctctcatatttgtgagg |
263 |
Q |
| |
|
||||| ||||||||||||||| |||||| || ||||||||||| || || || ||| |||| | ||||||||||||| | ||| ||||| || |
|
|
| T |
43745177 |
cgctgataatcattgaaataagccggcaca----gtaacaactgcattcttgacaggcaattgcaaaaatgtctctgcaatctcacgcatctttgttaga |
43745272 |
T |
|
| Q |
264 |
actattgatgaaatttcctcggcacggaggagtttctcctggcccttgaacttaagggaaatcatgggtttgtcattaacaccagaaacaaccttgaatg |
363 |
Q |
| |
|
| || ||||| ||||| ||||||| ||| | |||||||| |||||| |||||| ||||||| |||||||||||| | || |||| |||||||| | |
|
|
| T |
43745273 |
atcatagatgagatttcttcggcacataggtgcttctcctgtcccttgtacttaacagaaatcacgggtttgtcattcaatccggaaatgaccttgaacg |
43745372 |
T |
|
| Q |
364 |
gccacaacaatatatctttttgaacaacagggtcgctaaatttcctaccaattaacct |
421 |
Q |
| |
|
|||||||| ||||| ||||||||| ||| || |||| ||||||||||||||||| |
|
|
| T |
43745373 |
gccacaacttcatatcattttgaacatcagaatcattaaacttcctaccaattaacct |
43745430 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 77 - 192
Target Start/End: Original strand, 12528747 - 12528862
Alignment:
| Q |
77 |
ccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcat |
176 |
Q |
| |
|
|||||||||| ||| |||||||| || || || ||||| | || ||||| || ||||||||| ||||||||||| | |||||| |||||| | ||||| |
|
|
| T |
12528747 |
ccatatgcaagagcagctgcagttggttcgttgattatccgtattacattgaggccagcaatgacaccagcatccttggtggctcgtcgctgcgaatcat |
12528846 |
T |
|
| Q |
177 |
tgaaataagcaggcac |
192 |
Q |
| |
|
||||||| || ||||| |
|
|
| T |
12528847 |
tgaaatacgctggcac |
12528862 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 38; Significance: 0.000000000003; HSPs: 7)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 63 - 184
Target Start/End: Original strand, 28910811 - 28910932
Alignment:
| Q |
63 |
ctctcttctcaagtccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttt |
162 |
Q |
| |
|
||||||| || || ||||||| ||||||| | |||||| ||||||| ||||| | |||||||||||| | |||||||||||||||| || |||||||| |
|
|
| T |
28910811 |
ctctcttgtcgaggccatatgaaatagctacagcagtgagctcattgattatccgcataacattaagcctgacaatggcaccagcatctatggtggcttt |
28910910 |
T |
|
| Q |
163 |
tcgctgtgcatcattgaaataa |
184 |
Q |
| |
|
| || | ||||||||||||| |
|
|
| T |
28910911 |
cctctaagaatcattgaaataa |
28910932 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 11276197 - 11276270
Alignment:
| Q |
77 |
ccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatc |
150 |
Q |
| |
|
||||||||||| || |||||||| |||||||| ||||||| |||||| || || |||||||| ||||| ||||| |
|
|
| T |
11276197 |
ccatatgcaattgcagctgcagtaggctcatttattattcgcataacgtttaggccagcaatagcacccgcatc |
11276270 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 71 - 138
Target Start/End: Original strand, 11156507 - 11156574
Alignment:
| Q |
71 |
tcaagtccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaat |
138 |
Q |
| |
|
||||| ||||||||||| || ||||||| |||||||| ||||||| ||||||||| || |||||||| |
|
|
| T |
11156507 |
tcaagaccatatgcaattgcagctgcagaaggctcattgattattcgcataacattgaggccagcaat |
11156574 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 71 - 150
Target Start/End: Original strand, 11170807 - 11170886
Alignment:
| Q |
71 |
tcaagtccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatc |
150 |
Q |
| |
|
||||| ||||||||||| || |||||||| |||||||| | ||||| || |||||| || |||||||| ||||| ||||| |
|
|
| T |
11170807 |
tcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcaaaacattgaggccagcaatagcacccgcatc |
11170886 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 71 - 138
Target Start/End: Original strand, 11196960 - 11197027
Alignment:
| Q |
71 |
tcaagtccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaat |
138 |
Q |
| |
|
||||| ||||||||||| || ||||||| |||||||| ||||||| ||||||||| || |||||||| |
|
|
| T |
11196960 |
tcaagaccatatgcaattgcagctgcagaaggctcattgattattcgcataacattgaggccagcaat |
11197027 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 71 - 150
Target Start/End: Original strand, 11200125 - 11200204
Alignment:
| Q |
71 |
tcaagtccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatc |
150 |
Q |
| |
|
||||| ||||||||||| || ||||||| |||||||| ||||||| || |||||| || |||||||| ||||| ||||| |
|
|
| T |
11200125 |
tcaagaccatatgcaattgcagctgcagaaggctcattgattattcgcaaaacattgaggccagcaatagcacccgcatc |
11200204 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 11209635 - 11209708
Alignment:
| Q |
77 |
ccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatc |
150 |
Q |
| |
|
||||||||||| || |||||||| |||||||| | ||||| || |||||| || |||||||| ||||| ||||| |
|
|
| T |
11209635 |
ccatatgcaattgcagctgcagtaggctcattgagtattcgcaaaacattgaggccagcaatagcacccgcatc |
11209708 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1207 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1207
Description:
Target: scaffold1207; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 1128 - 1201
Alignment:
| Q |
77 |
ccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatc |
150 |
Q |
| |
|
||||||||||| || |||||||| |||||||| | ||||| || |||||| || |||||||| ||||| ||||| |
|
|
| T |
1128 |
ccatatgcaattgcagctgcagtaggctcattgagtattcccaaaacattgaggccagcaatagcacctgcatc |
1201 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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