View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2577_low_11 (Length: 263)

Name: NF2577_low_11
Description: NF2577
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2577_low_11
NF2577_low_11
[»] chr4 (6 HSPs)
chr4 (1-253)||(19484297-19484549)
chr4 (1-67)||(47237857-47237923)
chr4 (1-50)||(37050641-37050690)
chr4 (1-67)||(44832582-44832648)
chr4 (1-71)||(51206162-51206232)
chr4 (144-253)||(19507407-19507516)
[»] chr2 (7 HSPs)
chr2 (1-65)||(28898034-28898098)
chr2 (8-64)||(4964671-4964727)
chr2 (3-64)||(27968919-27968980)
chr2 (3-64)||(28091607-28091668)
chr2 (3-64)||(28101839-28101900)
chr2 (1-65)||(42182889-42182953)
chr2 (1-65)||(45554567-45554631)
[»] chr1 (10 HSPs)
chr1 (1-67)||(13388332-13388398)
chr1 (1-65)||(15523210-15523274)
chr1 (1-65)||(15531204-15531268)
chr1 (1-67)||(11135737-11135803)
chr1 (1-67)||(32848699-32848765)
chr1 (1-65)||(19101717-19101781)
chr1 (1-65)||(21466687-21466751)
chr1 (1-65)||(22540368-22540432)
chr1 (1-67)||(39039471-39039537)
chr1 (10-64)||(50773109-50773163)
[»] scaffold0194 (1 HSPs)
scaffold0194 (1-61)||(8413-8473)
[»] chr6 (3 HSPs)
chr6 (1-65)||(21987292-21987356)
chr6 (1-59)||(10133162-10133220)
chr6 (1-67)||(17226645-17226711)
[»] chr5 (2 HSPs)
chr5 (1-65)||(30325990-30326054)
chr5 (1-52)||(27592568-27592619)
[»] chr7 (5 HSPs)
chr7 (1-68)||(19494455-19494522)
chr7 (1-67)||(17354643-17354709)
chr7 (1-67)||(33008102-33008168)
chr7 (1-73)||(25428468-25428540)
chr7 (1-65)||(25428595-25428659)
[»] chr3 (3 HSPs)
chr3 (1-47)||(20791314-20791360)
chr3 (1-67)||(28529251-28529317)
chr3 (1-38)||(14236046-14236083)
[»] chr8 (1 HSPs)
chr8 (1-65)||(23685131-23685195)


Alignment Details
Target: chr4 (Bit Score: 177; Significance: 2e-95; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 253
Target Start/End: Complemental strand, 19484549 - 19484297
Alignment:
Q  1 tgatttcatccaataaaataatgagtactaaagagagtattcaaaagagagttttgatagcattcctattcttccagcatatatgtgtatctcatcattt 100  Q
    |||||||| ||||||||| ||||| | ||||| ||||   | ||||| |  ||||||||  |||| |||||||||||||||||| |||||||||||||||    
T  19484549 tgatttcacccaataaaacaatgaatgctaaaaagagcgcttaaaagcgctttttgatacaattcatattcttccagcatatatatgtatctcatcattt 19484450  T
Q  101 tatatgatatcactttagaatgtatttaacgacaccagggaggtgaatgttcaagaaataatcatcccatttggtcactttgggatcaaaataaaacaaa 200  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  19484449 tatatggtatcactttagaatgtatttaacgacgccagggaggtgaatgttcaagaaataatcatcccatttgatcactttgggatcaaaataaaacaaa 19484350  T
Q  201 tctgtctccaccccaccttgtcttgctgccattctcaacttctctgtattcat 253  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19484349 tctgtctccaccccaccttgtcttgctgccattctcaacttctctgtattcat 19484297  T

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Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 47237857 - 47237923
Alignment:
Q  1 tgatttcatccaataaaataatgagtactaaagagagtattcaaaagagagttttgatagcattcct 67  Q
    |||||||||||||||||| | ||| | ||| ||||||| ||||||||||||| ||||||||||||||    
T  47237857 tgatttcatccaataaaagagtgaatgctagagagagtgttcaaaagagagtgttgatagcattcct 47237923  T

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Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 37050690 - 37050641
Alignment:
Q  1 tgatttcatccaataaaataatgagtactaaagagagtattcaaaagaga 50  Q
    |||||| | ||||||||| |||||||| ||||||||||||||||||||||    
T  37050690 tgatttaaaccaataaaaaaatgagtattaaagagagtattcaaaagaga 37050641  T

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Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 44832582 - 44832648
Alignment:
Q  1 tgatttcatccaataaaataatgagtactaaagagagtattcaaaagagagttttgatagcattcct 67  Q
    |||||||| ||||||||| ||||||| ||  |||||||  |||||||||||| ||| ||||||||||    
T  44832582 tgatttcacccaataaaaaaatgagtgctggagagagtgctcaaaagagagtgttgctagcattcct 44832648  T

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Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 51206162 - 51206232
Alignment:
Q  1 tgatttcatccaataaaataatgagtactaaagagagtattcaaaagagagttttgatagcattcctattc 71  Q
    |||||||| ||||||||| | ||||| ||| |||||||  |||||||||||| ||| ||| ||||||||||    
T  51206162 tgatttcacccaataaaagagtgagtgctagagagagtgctcaaaagagagtgttgctagtattcctattc 51206232  T

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Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 144 - 253
Target Start/End: Complemental strand, 19507516 - 19507407
Alignment:
Q  144 tgaatgttcaagaaataatcatcccatttggtcactttgggatcaaaataaaacaaatctgtctccaccccaccttgtcttgctgccattctcaacttct 243  Q
    |||||||||| |||||| || ||||| ||  ||| ||| || ||||| ||||| |||||  |||| || |||| |||||||||||| |||  ||||||||    
T  19507516 tgaatgttcatgaaatagtcctcccagttaatcatttttgggtcaaagtaaaataaatccatctctactccactttgtcttgctgctatttgcaacttct 19507417  T
Q  244 ctgtattcat 253  Q
    ||| ||||||    
T  19507416 ctgcattcat 19507407  T

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Target: chr2 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 28898098 - 28898034
Alignment:
Q  1 tgatttcatccaataaaataatgagtactaaagagagtattcaaaagagagttttgatagcattc 65  Q
    |||||||||||||||||| | ||||| |||||||||||| |||||||||||| ||| ||||||||    
T  28898098 tgatttcatccaataaaagagtgagtgctaaagagagtactcaaaagagagtgttgctagcattc 28898034  T

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Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 4964727 - 4964671
Alignment:
Q  8 atccaataaaataatgagtactaaagagagtattcaaaagagagttttgatagcatt 64  Q
    ||||||||||| | ||||| ||| ||||||||||||||||||||| ||| |||||||    
T  4964727 atccaataaaagagtgagtgctagagagagtattcaaaagagagtattgctagcatt 4964671  T

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Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 27968980 - 27968919
Alignment:
Q  3 atttcatccaataaaataatgagtactaaagagagtattcaaaagagagttttgatagcatt 64  Q
    |||||| ||||||||| | ||||| ||| |||||||| |||||||||||| ||| |||||||    
T  27968980 atttcacccaataaaagagtgagtgctagagagagtactcaaaagagagtgttgctagcatt 27968919  T

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Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 64
Target Start/End: Original strand, 28091607 - 28091668
Alignment:
Q  3 atttcatccaataaaataatgagtactaaagagagtattcaaaagagagttttgatagcatt 64  Q
    |||||| ||||||||| | ||||| ||| |||||||| |||||||||||| ||| |||||||    
T  28091607 atttcacccaataaaagagtgagtgctagagagagtactcaaaagagagtgttgctagcatt 28091668  T

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Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 64
Target Start/End: Original strand, 28101839 - 28101900
Alignment:
Q  3 atttcatccaataaaataatgagtactaaagagagtattcaaaagagagttttgatagcatt 64  Q
    |||||| ||||||||| | ||||| ||| |||||||| |||||||||||| ||| |||||||    
T  28101839 atttcacccaataaaagagtgagtgctagagagagtactcaaaagagagtgttgctagcatt 28101900  T

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Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 42182953 - 42182889
Alignment:
Q  1 tgatttcatccaataaaataatgagtactaaagagagtattcaaaagagagttttgatagcattc 65  Q
    |||||||| ||||||||| | ||||| ||| |||||||  |||||||||||| ||| ||||||||    
T  42182953 tgatttcacccaataaaagagtgagtgctagagagagtgctcaaaagagagtgttgctagcattc 42182889  T

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Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 45554631 - 45554567
Alignment:
Q  1 tgatttcatccaataaaataatgagtactaaagagagtattcaaaagagagttttgatagcattc 65  Q
    |||||||||||||||||| | ||||| ||| ||||||| || ||||| |||| ||| ||||||||    
T  45554631 tgatttcatccaataaaagagtgagtgctagagagagtgttgaaaagtgagtgttgctagcattc 45554567  T

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Target: chr1 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 13388398 - 13388332
Alignment:
Q  1 tgatttcatccaataaaataatgagtactaaagagagtattcaaaagagagttttgatagcattcct 67  Q
    |||||||||||||||||| | |||||  || ||||||||||||||||||||| ||| ||||||||||    
T  13388398 tgatttcatccaataaaaaagtgagtgttagagagagtattcaaaagagagtgttgctagcattcct 13388332  T

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Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 15523274 - 15523210
Alignment:
Q  1 tgatttcatccaataaaataatgagtactaaagagagtattcaaaagagagttttgatagcattc 65  Q
    |||||||||||||||||||| ||||| ||||||||||| | |||||| || | ||||||||||||    
T  15523274 tgatttcatccaataaaatagtgagtgctaaagagagtgtgcaaaagtgaatgttgatagcattc 15523210  T

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Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 15531268 - 15531204
Alignment:
Q  1 tgatttcatccaataaaataatgagtactaaagagagtattcaaaagagagttttgatagcattc 65  Q
    |||||||||||||||||||| ||||| ||||||||||| | |||||| || | ||||||||||||    
T  15531268 tgatttcatccaataaaatagtgagtgctaaagagagtgtgcaaaagtgaatgttgatagcattc 15531204  T

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Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 11135803 - 11135737
Alignment:
Q  1 tgatttcatccaataaaataatgagtactaaagagagtattcaaaagagagttttgatagcattcct 67  Q
    |||||||| ||||||||||| ||||| ||| |||||||  |||||||||||| ||| ||||||||||    
T  11135803 tgatttcacccaataaaatagtgagtgctagagagagtgctcaaaagagagtgttgctagcattcct 11135737  T

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Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 32848699 - 32848765
Alignment:
Q  1 tgatttcatccaataaaataatgagtactaaagagagtattcaaaagagagttttgatagcattcct 67  Q
    |||||||| ||||||||| | ||||| ||| ||||||| ||||||||||||| ||| ||||||||||    
T  32848699 tgatttcacccaataaaagagtgagtgctagagagagtgttcaaaagagagtgttgttagcattcct 32848765  T

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Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 19101717 - 19101781
Alignment:
Q  1 tgatttcatccaataaaataatgagtactaaagagagtattcaaaagagagttttgatagcattc 65  Q
    |||||||||||||||||||| ||||| ||||||||||| | |||||| || | ||| ||||||||    
T  19101717 tgatttcatccaataaaatagtgagtgctaaagagagtgtgcaaaagtgaatgttgctagcattc 19101781  T

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Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 21466687 - 21466751
Alignment:
Q  1 tgatttcatccaataaaataatgagtactaaagagagtattcaaaagagagttttgatagcattc 65  Q
    |||||||||||||||||||| ||||| ||||||||||| | |||||| || | ||| ||||||||    
T  21466687 tgatttcatccaataaaatagtgagtgctaaagagagtgtgcaaaagtgaatgttgctagcattc 21466751  T

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Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 22540432 - 22540368
Alignment:
Q  1 tgatttcatccaataaaataatgagtactaaagagagtattcaaaagagagttttgatagcattc 65  Q
    |||||||||||||||||||| ||||| ||||||||||| | |||||| || | ||| ||||||||    
T  22540432 tgatttcatccaataaaatagtgagtgctaaagagagtgtgcaaaagtgaatgttgctagcattc 22540368  T

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Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 39039471 - 39039537
Alignment:
Q  1 tgatttcatccaataaaataatgagtactaaagagagtattcaaaagagagttttgatagcattcct 67  Q
    |||||||||||||||||| | ||||| ||||| ||||| || ||||| |||| ||| ||||||||||    
T  39039471 tgatttcatccaataaaagagtgagtgctaaaaagagtgttgaaaagtgagtgttgctagcattcct 39039537  T

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Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 64
Target Start/End: Complemental strand, 50773163 - 50773109
Alignment:
Q  10 ccaataaaataatgagtactaaagagagtattcaaaagagagttttgatagcatt 64  Q
    ||||||||| ||||||| ||| ||||||| ||||||||||||| ||| |||||||    
T  50773163 ccaataaaagaatgagtgctagagagagtgttcaaaagagagtattgctagcatt 50773109  T

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Target: scaffold0194 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 8473 - 8413
Alignment:
Q  1 tgatttcatccaataaaataatgagtactaaagagagtattcaaaagagagttttgatagc 61  Q
    |||||| | ||||||||| ||| |||| |||||||||||||||||||||||| ||| ||||    
T  8473 tgatttaaaccaataaaagaattagtattaaagagagtattcaaaagagagtgttgttagc 8413  T

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Target: chr6 (Bit Score: 33; Significance: 0.000000001; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 21987356 - 21987292
Alignment:
Q  1 tgatttcatccaataaaataatgagtactaaagagagtattcaaaagagagttttgatagcattc 65  Q
    |||||||||||||||||||| ||||| ||||||||||| | |||||| || | ||| ||||||||    
T  21987356 tgatttcatccaataaaatagtgagtgctaaagagagtgtgcaaaagtgaatgttgttagcattc 21987292  T

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Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 10133220 - 10133162
Alignment:
Q  1 tgatttcatccaataaaataatgagtactaaagagagtattcaaaagagagttttgata 59  Q
    |||||| | ||||||||| | |||||| ||||| |||||||||||||||||| ||||||    
T  10133220 tgatttaaaccaataaaagagtgagtattaaagtgagtattcaaaagagagtgttgata 10133162  T

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Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 17226645 - 17226711
Alignment:
Q  1 tgatttcatccaataaaataatgagtactaaagagagtattcaaaagagagttttgatagcattcct 67  Q
    |||||||||||||||||| | ||| | ||||||||||| |||| |||||||| ||| ||| ||||||    
T  17226645 tgatttcatccaataaaagagtgaatgctaaagagagtgttcagaagagagtgttgttagtattcct 17226711  T

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Target: chr5 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 30325990 - 30326054
Alignment:
Q  1 tgatttcatccaataaaataatgagtactaaagagagtattcaaaagagagttttgatagcattc 65  Q
    |||||||||||||||||||| ||||| ||||||||||| | |||||| || | ||| ||||||||    
T  30325990 tgatttcatccaataaaatagtgagtgctaaagagagtgtgcaaaagtgaatgttgctagcattc 30326054  T

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Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 27592568 - 27592619
Alignment:
Q  1 tgatttcatccaataaaataatgagtactaaagagagtattcaaaagagagt 52  Q
    |||||||||||||||||||| ||||| ||||||||||| | |||||| ||||    
T  27592568 tgatttcatccaataaaatagtgagtgctaaagagagtgtgcaaaagcgagt 27592619  T

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Target: chr7 (Bit Score: 32; Significance: 0.000000006; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 19494455 - 19494522
Alignment:
Q  1 tgatttcatccaataaaataatgagtactaaagagagtattcaaaagagagttttgatagcattccta 68  Q
    |||||||| ||||||||| | ||||||||| ||| |||| ||||||||||||  || |||||||||||    
T  19494455 tgatttcacccaataaaagagtgagtactagagaaagtactcaaaagagagtgctgctagcattccta 19494522  T

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Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 17354643 - 17354709
Alignment:
Q  1 tgatttcatccaataaaataatgagtactaaagagagtattcaaaagagagttttgatagcattcct 67  Q
    |||||||||||||||||| |||||||  || |||||||  |||||| ||||| ||| ||||||||||    
T  17354643 tgatttcatccaataaaagaatgagtgttagagagagtgctcaaaaaagagtgttgctagcattcct 17354709  T

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Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 33008168 - 33008102
Alignment:
Q  1 tgatttcatccaataaaataatgagtactaaagagagtattcaaaagagagttttgatagcattcct 67  Q
    |||||||||||||||||| | ||||| ||| ||| ||| |||||||| |||| ||| ||||||||||    
T  33008168 tgatttcatccaataaaagagtgagtgctagagatagtgttcaaaagtgagtgttgctagcattcct 33008102  T

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Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 25428540 - 25428468
Alignment:
Q  1 tgatttcatccaataaaataatgagtactaaagagagtattcaaaagagagttttgatagcattcctattctt 73  Q
    |||||| ||||||||||| | ||||| |||||||||||  |||||||||||| ||| || |||| || |||||    
T  25428540 tgattttatccaataaaagagtgagtgctaaagagagtgctcaaaagagagtgttgctatcatttctcttctt 25428468  T

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Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 25428595 - 25428659
Alignment:
Q  1 tgatttcatccaataaaataatgagtactaaagagagtattcaaaagagagttttgatagcattc 65  Q
    ||||||||  |||||||| | ||||||||||| |||||  |||||||||||| ||| ||||||||    
T  25428595 tgatttcacacaataaaagagtgagtactaaaaagagtgctcaaaagagagtgttgctagcattc 25428659  T

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Target: chr3 (Bit Score: 31; Significance: 0.00000002; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 20791360 - 20791314
Alignment:
Q  1 tgatttcatccaataaaataatgagtactaaagagagtattcaaaag 47  Q
    |||||||||||||||||||| ||||| ||||||||||| | ||||||    
T  20791360 tgatttcatccaataaaatagtgagtgctaaagagagtgtgcaaaag 20791314  T

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Target: chr3; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 28529317 - 28529251
Alignment:
Q  1 tgatttcatccaataaaataatgagtactaaagagagtattcaaaagagagttttgatagcattcct 67  Q
    |||||||||||||||||| | ||||| ||| ||||||| || ||||| |||| ||| ||||||||||    
T  28529317 tgatttcatccaataaaagagtgagtgctagagagagtgttgaaaagtgagtgttgctagcattcct 28529251  T

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Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 14236083 - 14236046
Alignment:
Q  1 tgatttcatccaataaaataatgagtactaaagagagt 38  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  14236083 tgatttcatccaataaaatagtgagtgctaaagagagt 14236046  T

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Target: chr8 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 23685195 - 23685131
Alignment:
Q  1 tgatttcatccaataaaataatgagtactaaagagagtattcaaaagagagttttgatagcattc 65  Q
    |||||||||||||||||||| ||||| || |||||||| | |||||| || | ||| ||||||||    
T  23685195 tgatttcatccaataaaatagtgagtgcttaagagagtgtgcaaaagtgaatgttgctagcattc 23685131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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