View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2577_low_17 (Length: 239)
Name: NF2577_low_17
Description: NF2577
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2577_low_17 |
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Alignment Details
Target: chr5 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 2264561 - 2264333
Alignment:
| Q |
1 |
ttcaacaattgatctgatcttcttcatcacttcatttctgatcgtcccccatacaatcaatttggatcggtttttcagaaaaataaatccaaaccaacca |
100 |
Q |
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| T |
2264561 |
ttcaacaattgatctgatcttcttcatcacttcatttctgatcgtcccccatacaatcaatttggatcggtttttcagaaaaataaatccaaaccaacca |
2264462 |
T |
|
| Q |
101 |
ctaaaaatgatttgttttggttcggtttctaaaatcttcttgagtctacttgt------tatatgtaagctttgtgttcaaggtatttgcctcaaaatta |
194 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
2264461 |
ctaaaaatgatttgttttggttcggtttctaaaatcttcttgagtctacttgttatacttatatgtaagctttgtgttcaaggtatttgcctcaaaattg |
2264362 |
T |
|
| Q |
195 |
aatatgaaggtctccatatccttcacagt |
223 |
Q |
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||||||||||||||||||||||||||||| |
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| T |
2264361 |
aatatgaaggtctccatatccttcacagt |
2264333 |
T |
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