View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2579_high_11 (Length: 250)
Name: NF2579_high_11
Description: NF2579
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2579_high_11 |
 | |
|
| [»] scaffold0010 (2 HSPs) |
| | |
|
| [»] scaffold0026 (1 HSPs) |
| | |
|
| [»] scaffold0177 (1 HSPs) |
| | |
|
| [»] scaffold1507 (1 HSPs) |
| | |
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| [»] scaffold0771 (1 HSPs) |
| | |
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| [»] scaffold0655 (1 HSPs) |
| | |
|
| [»] scaffold0443 (1 HSPs) |
| | |
|
| [»] scaffold0050 (1 HSPs) |
| | |
|
| [»] scaffold1747 (1 HSPs) |
| | |
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| [»] scaffold1745 (1 HSPs) |
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| [»] scaffold1657 (1 HSPs) |
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| [»] scaffold0570 (1 HSPs) |
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| [»] scaffold0544 (1 HSPs) |
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| [»] scaffold0163 (1 HSPs) |
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| [»] scaffold0017 (1 HSPs) |
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| [»] scaffold0009 (1 HSPs) |
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| [»] scaffold0004 (1 HSPs) |
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| [»] scaffold0530 (1 HSPs) |
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| [»] scaffold0103 (1 HSPs) |
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| [»] scaffold0035 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 174; Significance: 1e-93; HSPs: 15)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 5290631 - 5290857
Alignment:
| Q |
1 |
tttgatttgattttattaagttagattggagacgtctcttttctgtgtgattgagcgataaaagtctatttcttgtatgagagcaatataagtctcttgc |
100 |
Q |
| |
|
||||||||||||| |||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5290631 |
tttgatttgatttgattaagttagattggagaagtctcttttctgtgtgattgagtgataaaagtctatttcttgtatgagagcaatataagtctcttg- |
5290729 |
T |
|
| Q |
101 |
ttgtgtgcttgagcaaattgtaatatatgagatttatagtgaacagcccttagaagtgcaaggggactggactactctcggtttgtgggaggaactagta |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
5290730 |
-----------agcaaattgtaatatatgagatttatagtgaacatcccttagaagtgcaaggggactggactactctcgatttgtgggaggaactagta |
5290818 |
T |
|
| Q |
201 |
taattgttttgtgtcttctctctatgtgtttgatttcat |
239 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
5290819 |
taattgttttctgtcttctctctatgtgtttgatttcat |
5290857 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 195
Target Start/End: Original strand, 8309810 - 8309914
Alignment:
| Q |
90 |
aagtctcttgcttgtgtgcttgagcaaattgtaatatatgagatttatagtgaacagcccttagaagtgcaaggggactggactactctcggtttgtggg |
189 |
Q |
| |
|
|||| |||||||| ||| |||||| |||||||||| ||||||| |||||||| || || |||||||||||||| |||||||||||||||||||||| |
|
|
| T |
8309810 |
aagtatcttgcttttgtacttgagaaaattgtaattcgtgagatt-atagtgaaatccctttggaagtgcaaggggattggactactctcggtttgtggg |
8309908 |
T |
|
| Q |
190 |
aggaac |
195 |
Q |
| |
|
|||||| |
|
|
| T |
8309909 |
aggaac |
8309914 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 148 - 217
Target Start/End: Original strand, 29936080 - 29936149
Alignment:
| Q |
148 |
ccttagaagtgcaaggggactggactactctcggtttgtgggaggaactagtataattgttttgtgtctt |
217 |
Q |
| |
|
|||| ||||||||||||||| |||||||| |||||||||| |||||| |||||||||||||||||||| |
|
|
| T |
29936080 |
ccttggaagtgcaaggggacaggactacttccggtttgtggaaggaacctgtataattgttttgtgtctt |
29936149 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 90 - 221
Target Start/End: Complemental strand, 17879873 - 17879743
Alignment:
| Q |
90 |
aagtctcttgcttgtgtgcttgagcaaattgtaatatatgagatttatagtgaacagcccttagaagtgcaaggggactggactactctcggtttgtggg |
189 |
Q |
| |
|
||||||||| |||||||| || | ||||||||||||| | ||||| |||||||| | | |||||||||||||| ||| || |||||| | |||||||||| |
|
|
| T |
17879873 |
aagtctcttacttgtgtgtttaaacaaattgtaatatgtaagatt-atagtgaaaatctcttagaagtgcaagtggattgtactactgttggtttgtggg |
17879775 |
T |
|
| Q |
190 |
aggaactagtataattgttttgtgtcttctct |
221 |
Q |
| |
|
||||| | |||||| | ||||||| ||||| |
|
|
| T |
17879774 |
tggaaccaacataattttcttgtgtcgtctct |
17879743 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 120 - 206
Target Start/End: Complemental strand, 21019472 - 21019387
Alignment:
| Q |
120 |
gtaatatatgagatttatagtgaacagcccttagaagtgcaaggggactggactactctcggtttgtgggaggaactagtataattg |
206 |
Q |
| |
|
||||||| ||||||| ||||| || | ||||| ||||| |||||| |||| |||||||||||||||||| |||||| | |||||||| |
|
|
| T |
21019472 |
gtaatatgtgagatt-atagttaaaatcccttggaagtacaagggaactgaactactctcggtttgtggaaggaaccaatataattg |
21019387 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 13175296 - 13175355
Alignment:
| Q |
148 |
ccttagaagtgcaagggg-actggactactctcggtttgtgggaggaactagtataattg |
206 |
Q |
| |
|
|||| ||||||||||||| ||||||||||| |||||||||| |||||| |||||||||| |
|
|
| T |
13175296 |
ccttggaagtgcaagggggactggactacttccggtttgtggaaggaaccagtataattg |
13175355 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 210
Target Start/End: Complemental strand, 18418733 - 18418670
Alignment:
| Q |
148 |
ccttagaagtgcaagggg-actggactactctcggtttgtgggaggaactagtataattgtttt |
210 |
Q |
| |
|
|||| ||||||||||||| ||||||||||| |||||||||| |||||| || ||||||||||| |
|
|
| T |
18418733 |
ccttggaagtgcaagggggactggactacttccggtttgtggaaggaaccaggataattgtttt |
18418670 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 108 - 195
Target Start/End: Complemental strand, 20052835 - 20052750
Alignment:
| Q |
108 |
cttgagcaaattgtaatatatgagatttatagtgaacagcccttagaagtgcaaggggactggactactctcggtttgtgggaggaac |
195 |
Q |
| |
|
||||||||| ||||||| || | |||| |||||||| | |||| ||||||||||||| ||| ||||||||| | |||||||||||||| |
|
|
| T |
20052835 |
cttgagcaagttgtaatctaagtgatt-atagtgaa-atccctaagaagtgcaagggaactagactactcttgttttgtgggaggaac |
20052750 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 115
Target Start/End: Complemental strand, 4447091 - 4447057
Alignment:
| Q |
81 |
gagcaatataagtctcttgcttgtgtgcttgagca |
115 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||| |
|
|
| T |
4447091 |
gagcaatagaagtctcttgcttgtgtgcttgagca |
4447057 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 217
Target Start/End: Complemental strand, 11792333 - 11792263
Alignment:
| Q |
148 |
ccttagaagtgcaagggg-actggactactctcggtttgtgggaggaactagtataattgttttgtgtctt |
217 |
Q |
| |
|
|||| ||||||||||||| || ||||||| |||||||||| |||||| |||||||||||||||||||| |
|
|
| T |
11792333 |
ccttggaagtgcaagggggacaagactacttccggtttgtggaaggaacctgtataattgttttgtgtctt |
11792263 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 13681939 - 13681881
Alignment:
| Q |
148 |
ccttagaagtgcaaggggactggactactctcggtttgtgggaggaactagtataattg |
206 |
Q |
| |
|
|||| ||||||||||||| |||||||||| |||||||||| |||||| || ||||||| |
|
|
| T |
13681939 |
ccttcgaagtgcaaggggtctggactacttccggtttgtggaaggaaccaggataattg |
13681881 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 148 - 216
Target Start/End: Original strand, 19711745 - 19711814
Alignment:
| Q |
148 |
ccttagaagtgcaagggg-actggactactctcggtttgtgggaggaactagtataattgttttgtgtct |
216 |
Q |
| |
|
|||| ||||||||||||| ||||||||||| ||||| ||| |||||| |||||||||| ||||||||| |
|
|
| T |
19711745 |
ccttggaagtgcaagggggactggactacttctggtttatggaaggaaccagtataattgctttgtgtct |
19711814 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 217
Target Start/End: Original strand, 39285242 - 39285307
Alignment:
| Q |
153 |
gaagtgcaaggg-gactggactactctcggtttgtgggaggaactagtataattgttttgtgtctt |
217 |
Q |
| |
|
|||||| ||||| ||| |||||||| |||||||||| |||||| |||||||||||||||||||| |
|
|
| T |
39285242 |
gaagtggaagggagacaggactacttccggtttgtggaaggaacctgtataattgttttgtgtctt |
39285307 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 206
Target Start/End: Complemental strand, 19141790 - 19141718
Alignment:
| Q |
135 |
tatagtgaacagcccttagaagtgcaaggggactggactactctcgg-tttgtgggaggaactagtataattg |
206 |
Q |
| |
|
||||||||| | ||||| |||||||||| || ||||||||||| || ||||| |||||||| |||||||||| |
|
|
| T |
19141790 |
tatagtgaaaatcccttggaagtgcaagagggttggactactcttggatttgtaggaggaaccagtataattg |
19141718 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 206
Target Start/End: Complemental strand, 20741189 - 20741117
Alignment:
| Q |
135 |
tatagtgaacagcccttagaagtgcaaggggactggactactctcgg-tttgtgggaggaactagtataattg |
206 |
Q |
| |
|
||||||||| | ||||| |||||||||| || ||||||||||| || ||||| |||||||| |||||||||| |
|
|
| T |
20741189 |
tatagtgaaaatcccttggaagtgcaagagggttggactactcttggatttgtaggaggaaccagtataattg |
20741117 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 63; Significance: 2e-27; HSPs: 17)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 95 - 213
Target Start/End: Original strand, 33014060 - 33014177
Alignment:
| Q |
95 |
tcttgcttgtgtgcttgagcaaattgtaatatatgagatttatagtgaacagcccttagaagtgcaaggggactggactactctcggtttgtgggaggaa |
194 |
Q |
| |
|
|||||| ||||||||||||||| ||||||||| ||||||| |||||||| | |||||| ||||||||||||| || |||||||||| ||||||||||||| |
|
|
| T |
33014060 |
tcttgcctgtgtgcttgagcaatttgtaatatgtgagatt-atagtgaaaaccccttaaaagtgcaaggggattgaactactctcgatttgtgggaggaa |
33014158 |
T |
|
| Q |
195 |
ctagtataattgttttgtg |
213 |
Q |
| |
|
| | |||||||| |||||| |
|
|
| T |
33014159 |
ccaatataattgctttgtg |
33014177 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 205
Target Start/End: Original strand, 24110047 - 24110099
Alignment:
| Q |
153 |
gaagtgcaaggggactggactactctcggtttgtgggaggaactagtataatt |
205 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||| | ||||||| |
|
|
| T |
24110047 |
gaagtgcaaggggactggactactcttggtttgtgggaggaaccaatataatt |
24110099 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 153 - 215
Target Start/End: Original strand, 28789932 - 28789994
Alignment:
| Q |
153 |
gaagtgcaaggggactggactactctcggtttgtgggaggaactagtataattgttttgtgtc |
215 |
Q |
| |
|
|||||||||||||||| |||||||||| || ||||||||||| | ||||||||||||||||| |
|
|
| T |
28789932 |
gaagtgcaaggggacttgactactctcaattcgtgggaggaaccaatataattgttttgtgtc |
28789994 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 148 - 217
Target Start/End: Complemental strand, 18702163 - 18702093
Alignment:
| Q |
148 |
ccttagaagtgcaagggg-actggactactctcggtttgtgggaggaactagtataattgttttgtgtctt |
217 |
Q |
| |
|
|||| ||||||||||||| || ||||||| ||||||||||| |||||| |||||||||||||||||||| |
|
|
| T |
18702163 |
ccttggaagtgcaagggggacatgactactttcggtttgtggaaggaacctgtataattgttttgtgtctt |
18702093 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 148 - 209
Target Start/End: Original strand, 38040586 - 38040648
Alignment:
| Q |
148 |
ccttagaagtgcaaggg-gactggactactctcggtttgtgggaggaactagtataattgttt |
209 |
Q |
| |
|
|||| |||||||||||| |||||||||||| |||||||||| |||||| ||||||||||||| |
|
|
| T |
38040586 |
ccttggaagtgcaagggagactggactacttccggtttgtggaaggaaccagtataattgttt |
38040648 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 217
Target Start/End: Complemental strand, 25828584 - 25828515
Alignment:
| Q |
148 |
ccttagaagtgcaaggggactggactactctcggtttgtgggaggaactagtataattgttttgtgtctt |
217 |
Q |
| |
|
|||| ||||||||||||| | |||||||| |||||||||| |||||| ||||||||| |||||||||| |
|
|
| T |
25828584 |
ccttggaagtgcaagggggcaggactacttccggtttgtggaaggaacctgtataattggtttgtgtctt |
25828515 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 23393345 - 23393404
Alignment:
| Q |
148 |
ccttagaagtgcaagggg-actggactactctcggtttgtgggaggaactagtataattg |
206 |
Q |
| |
|
|||| ||||||||||||| ||||||||||| |||||||||| |||||| |||||||||| |
|
|
| T |
23393345 |
ccttggaagtgcaagggggactggactacttccggtttgtggaaggaaccagtataattg |
23393404 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 217
Target Start/End: Complemental strand, 24376529 - 24376459
Alignment:
| Q |
148 |
ccttagaagtgcaa-ggggactggactactctcggtttgtgggaggaactagtataattgttttgtgtctt |
217 |
Q |
| |
|
|||||||||||||| |||||| ||||||| |||||||||| |||||| ||||||||| |||||||||| |
|
|
| T |
24376529 |
ccttagaagtgcaagggggacatgactacttccggtttgtggaaggaacctgtataattgctttgtgtctt |
24376459 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 209
Target Start/End: Original strand, 38033427 - 38033489
Alignment:
| Q |
148 |
ccttagaagtgcaaggg-gactggactactctcggtttgtgggaggaactagtataattgttt |
209 |
Q |
| |
|
|||| |||||||||||| |||||||||||| ||||||||| |||||| ||||||||||||| |
|
|
| T |
38033427 |
ccttggaagtgcaagggagactggactacttctggtttgtggaaggaaccagtataattgttt |
38033489 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 217
Target Start/End: Complemental strand, 38631144 - 38631106
Alignment:
| Q |
179 |
cggtttgtgggaggaactagtataattgttttgtgtctt |
217 |
Q |
| |
|
|||||||||| ||||||| |||||||||||||||||||| |
|
|
| T |
38631144 |
cggtttgtggaaggaacttgtataattgttttgtgtctt |
38631106 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 195
Target Start/End: Complemental strand, 8685057 - 8684997
Alignment:
| Q |
134 |
ttatagtgaacagcccttagaagtgcaaggggactggactactctcggtttgtgggaggaac |
195 |
Q |
| |
|
|||||||||| | ||||| ||||||||||||||||||||||||| | ||||||||||||| |
|
|
| T |
8685057 |
ttatagtgaa-atcccttggaagtgcaaggggactggactactcctgtgttgtgggaggaac |
8684997 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 148 - 217
Target Start/End: Original strand, 14794468 - 14794537
Alignment:
| Q |
148 |
ccttagaagtgcaaggggactggactactctcggtttgtgggaggaactagtataattgttttgtgtctt |
217 |
Q |
| |
|
|||| |||||||||||||||||||||||| || |||| | |||||| || ||||||| |||||||||| |
|
|
| T |
14794468 |
ccttggaagtgcaaggggactggactacttccgaattgttgaaggaaccaggataattggtttgtgtctt |
14794537 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 116
Target Start/End: Complemental strand, 33240261 - 33240232
Alignment:
| Q |
87 |
tataagtctcttgcttgtgtgcttgagcaa |
116 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
33240261 |
tataagtctcttgcttgtgtgcttgagcaa |
33240232 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 116
Target Start/End: Complemental strand, 33248182 - 33248153
Alignment:
| Q |
87 |
tataagtctcttgcttgtgtgcttgagcaa |
116 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
33248182 |
tataagtctcttgcttgtgtgcttgagcaa |
33248153 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 19498585 - 19498641
Alignment:
| Q |
148 |
ccttagaagtgcaagggg-actggactactctcggtttgtgggaggaactagtataa |
203 |
Q |
| |
|
|||| ||||||||||||| ||||||||||| |||||||||| |||||| ||||||| |
|
|
| T |
19498585 |
ccttggaagtgcaagggggactggactacttccggtttgtggaaggaaccagtataa |
19498641 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 223
Target Start/End: Original strand, 26655359 - 26655430
Alignment:
| Q |
154 |
aagtgcaaggggactggactactctcggtttgtgggaggaactagtat--aattgttttgtgtcttctctct |
223 |
Q |
| |
|
||||||||||||||||||| |||| | ||||||||||||| ||||| ||||| ||||||||| |||||| |
|
|
| T |
26655359 |
aagtgcaaggggactggaccactcctgtgttgtgggaggaaccagtataaaattgctttgtgtctcctctct |
26655430 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 223
Target Start/End: Original strand, 27766183 - 27766259
Alignment:
| Q |
148 |
ccttagaagtgcaaggggactggactactctcggtttgtgggaggaactagtat-aattgttttgtgtcttctctct |
223 |
Q |
| |
|
|||| |||||| ||||||||||||||||| ||||||| |||||||| ||||| |||||| |||||| | |||||| |
|
|
| T |
27766183 |
ccttggaagtgtaaggggactggactacttctggtttgtaggaggaacaagtataaattgtcttgtgtatgctctct |
27766259 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 46; Significance: 2e-17; HSPs: 26)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 93 - 221
Target Start/End: Complemental strand, 8501968 - 8501840
Alignment:
| Q |
93 |
tctcttgcttgtgtgcttgagcaaattgtaatata-tgagatttatagtgaacagcccttagaagtgcaaggggactggactactctcggtttgtgggag |
191 |
Q |
| |
|
|||||| ||| |||| || ||||||||||||| || ||||||| ||||| || | |||| ||||||||||||| ||||||||||||||||||||| ||| |
|
|
| T |
8501968 |
tctcttacttatgtgtttaagcaaattgtaatctagtgagatt-atagtaaaaattccttggaagtgcaaggggtctggactactctcggtttgtgagag |
8501870 |
T |
|
| Q |
192 |
gaactagtataattgttttgtgtcttctct |
221 |
Q |
| |
|
||| ||||||||| | ||||||| ||||| |
|
|
| T |
8501869 |
gaatcagtataattttcttgtgtcgtctct |
8501840 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 197
Target Start/End: Original strand, 13977895 - 13978000
Alignment:
| Q |
90 |
aagtctcttgcttgtgtgcttgagcaaattgtaatatat-gagatttatagtgaacagcccttagaagtgcaaggggactggactactctcggtttgtgg |
188 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||| | | | |||| |||||||| | |||| |||||||||||||||| |||||||||||||||||| |
|
|
| T |
13977895 |
aagtctcttgcttgtgtgcttgagcat-ttgtaatctttagtgatt-atagtgaaaattcctt-gaagtgcaaggggactagactactctcggtttgtga |
13977991 |
T |
|
| Q |
189 |
gaggaacta |
197 |
Q |
| |
|
||||||||| |
|
|
| T |
13977992 |
gaggaacta |
13978000 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 90 - 203
Target Start/End: Complemental strand, 12235829 - 12235717
Alignment:
| Q |
90 |
aagtctcttgcttgtgtgcttgagcaaattgtaatatat-gagatttatagtgaacagcccttagaagtgcaaggggactggactactctcggtttgtgg |
188 |
Q |
| |
|
||||||||| ||||||||||||||||| ||||||||| | | |||| ||| |||| | |||| ||||||||| || || |||||||||||||||||| |
|
|
| T |
12235829 |
aagtctctttcttgtgtgcttgagcaa-ttgtaatatttagtgatt-ataatgaaaatgccttgaaagtgcaagtggtctagactactctcggtttgtga |
12235732 |
T |
|
| Q |
189 |
gaggaactagtataa |
203 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
12235731 |
gaggaactagtataa |
12235717 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 217
Target Start/End: Complemental strand, 12600167 - 12600112
Alignment:
| Q |
162 |
ggggactggactactctcggtttgtgggaggaactagtataattgttttgtgtctt |
217 |
Q |
| |
|
|||||| |||||||| |||||||||| ||||||| |||||||||||||||||||| |
|
|
| T |
12600167 |
ggggacaggactacttccggtttgtggaaggaacttgtataattgttttgtgtctt |
12600112 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 205
Target Start/End: Complemental strand, 43357816 - 43357702
Alignment:
| Q |
90 |
aagtctcttgcttgtgtgcttgagcaaattgtaatatatgagatttatagtgaacagcccttagaagtgcaaggggactggactactctcggtttgtggg |
189 |
Q |
| |
|
|||||| || |||||||| ||||| |||||||||| | |||||| |||||||| | | || |||||||||| || ||||||||||||| | |||| | |
|
|
| T |
43357816 |
aagtcttttacttgtgtgtttgagaaaattgtaatttgggagatt-atagtgaaaattctttggaagtgcaagttgattggactactctcgatctgtgag |
43357718 |
T |
|
| Q |
190 |
aggaactagtataatt |
205 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
43357717 |
aggaactagtataatt |
43357702 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 148 - 217
Target Start/End: Complemental strand, 3395072 - 3395002
Alignment:
| Q |
148 |
ccttagaagtgcaag-gggactggactactctcggtttgtgggaggaactagtataattgttttgtgtctt |
217 |
Q |
| |
|
|||| |||||||||| ||||| ||||||| ||||||||||| |||||| |||||||||||||||||||| |
|
|
| T |
3395072 |
ccttggaagtgcaagagggacatgactactttcggtttgtggaaggaacctgtataattgttttgtgtctt |
3395002 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 148 - 217
Target Start/End: Complemental strand, 6641106 - 6641037
Alignment:
| Q |
148 |
ccttagaagtgcaagggg-actggactactctcggtttgtgggaggaactagtataattgttttgtgtctt |
217 |
Q |
| |
|
|||| ||||||||||||| || ||||||| ||||||||||| ||||||| |||||||||||||||||||| |
|
|
| T |
6641106 |
ccttggaagtgcaagggggacatgactact-tcggtttgtggaaggaacttgtataattgttttgtgtctt |
6641037 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 31267399 - 31267457
Alignment:
| Q |
148 |
ccttagaagtgcaaggggactggactactctcggtttgtgggaggaactagtataattg |
206 |
Q |
| |
|
|||| |||||||||||||||||||||||| |||||||||| |||||| || ||||||| |
|
|
| T |
31267399 |
ccttggaagtgcaaggggactggactacttccggtttgtggaaggaaccaggataattg |
31267457 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 223
Target Start/End: Complemental strand, 19052779 - 19052696
Alignment:
| Q |
134 |
ttatagtgaacagcccttagaagtgcaaggggactggactactctcggtttgtgggaggaactagtataattgttttgtgtcttctctct |
223 |
Q |
| |
|
|||||||||| | ||||| ||||||||||||||||||||||||| |||| |||||||| ||||| |||| ||||||||| |||||| |
|
|
| T |
19052779 |
ttatagtgaa-atcccttggaagtgcaaggggactggactactc-----ttgtaggaggaaccagtatgattgatttgtgtctgctctct |
19052696 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 115
Target Start/End: Complemental strand, 46979179 - 46979071
Alignment:
| Q |
10 |
attttattaagttagattggagacgtctcttttctg-tgtgattgagcgataaaagtctatttcttgtatga--gagcaatataagtctcttgcttgtgt |
106 |
Q |
| |
|
|||| |||||||||||||| ||| |||||||||| | ||||||||||| ||||||||||||||| | ||| |||||| | |||| ||||| | |||| |
|
|
| T |
46979179 |
atttgattaagttagattgtagaagtctcttttcagttgtgattgagcagaaaaagtctatttcttatgtgattgagcaacagaagtatcttgttcgtgt |
46979080 |
T |
|
| Q |
107 |
gcttgagca |
115 |
Q |
| |
|
||||||||| |
|
|
| T |
46979079 |
gcttgagca |
46979071 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 217
Target Start/End: Original strand, 8686154 - 8686202
Alignment:
| Q |
169 |
ggactactctcggtttgtgggaggaactagtataattgttttgtgtctt |
217 |
Q |
| |
|
|||||||| |||||||||| ||||||| |||||||||||||||||||| |
|
|
| T |
8686154 |
ggactacttccggtttgtggaaggaacttgtataattgttttgtgtctt |
8686202 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 217
Target Start/End: Original strand, 37986307 - 37986371
Alignment:
| Q |
154 |
aagtgcaagggg-actggactactctcggtttgtgggaggaactagtataattgttttgtgtctt |
217 |
Q |
| |
|
|||||||||||| || |||||||| |||||||||| |||||| |||||||||||||||||||| |
|
|
| T |
37986307 |
aagtgcaagggggacaggactacttccggtttgtggaaggaacctgtataattgttttgtgtctt |
37986371 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 14711385 - 14711444
Alignment:
| Q |
148 |
ccttagaagtgcaagggg-actggactactctcggtttgtgggaggaactagtataattg |
206 |
Q |
| |
|
|||| ||||||||||||| ||||||||||| |||||||||| |||||| |||||||||| |
|
|
| T |
14711385 |
ccttggaagtgcaagggggactggactacttccggtttgtggaaggaaccagtataattg |
14711444 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 14779049 - 14779108
Alignment:
| Q |
148 |
ccttagaagtgcaagggg-actggactactctcggtttgtgggaggaactagtataattg |
206 |
Q |
| |
|
|||| ||||||||||||| ||||||||||| |||||||||| |||||| |||||||||| |
|
|
| T |
14779049 |
ccttggaagtgcaagggggactggactacttccggtttgtggaaggaaccagtataattg |
14779108 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 19241672 - 19241613
Alignment:
| Q |
148 |
ccttagaagtgcaagg-ggactggactactctcggtttgtgggaggaactagtataattg |
206 |
Q |
| |
|
|||| ||||||||||| ||||||||||||| |||||||||| |||||| |||||||||| |
|
|
| T |
19241672 |
ccttggaagtgcaaggaggactggactacttccggtttgtggaaggaaccagtataattg |
19241613 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 223
Target Start/End: Original strand, 19556053 - 19556157
Alignment:
| Q |
116 |
aattgtaatatatgagatttatagtgaacagcccttagaagtgcaaggggactggactactctcggtttgtgggaggaactagtataattgttttgtgtc |
215 |
Q |
| |
|
||||||||||||||||||| |||||||| | | || ||||||||| |||||||||||||| | ||| ||||||||||| ||||||| | |||||||| |
|
|
| T |
19556053 |
aattgtaatatatgagatt-atagtgaa-attcattggaagtgcaacgggactggactactttgtgtt-gtgggaggaaccagtataaattgtttgtgtc |
19556149 |
T |
|
| Q |
216 |
ttctctct |
223 |
Q |
| |
|
| |||||| |
|
|
| T |
19556150 |
tgctctct |
19556157 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 203
Target Start/End: Original strand, 22223440 - 22223525
Alignment:
| Q |
116 |
aattgtaatatatgagatttatagtgaacagcccttagaagtgcaaggggactggactactctcggtttgtgggaggaactagtataa |
203 |
Q |
| |
|
||||||||||| ||||||| |||||||| | ||||| |||||||||| ||||| |||||||| | ||||||||||||| ||||||| |
|
|
| T |
22223440 |
aattgtaatatgtgagatt-atagtgaa-atcccttggaagtgcaagaggacttgactactcctgtgttgtgggaggaaccagtataa |
22223525 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 236
Target Start/End: Original strand, 15522014 - 15522191
Alignment:
| Q |
59 |
taaaagtctatttcttgtatga--gagcaatataagtctcttgcttgtgtgcttgagcaaattgtaatatatgagatttatagtgaacagcccttagaag |
156 |
Q |
| |
|
||||||| | |||||||||||| |||||||| |||| |||||||| |||| ||||||| ||||||| | | | || ||||||| | |||| | ||| |
|
|
| T |
15522014 |
taaaagtttctttcttgtatgattgagcaataaaagtttcttgcttttgtgtttgagcat-ttgtaattca--ataattttagtgaaaatccctcaaaag |
15522110 |
T |
|
| Q |
157 |
tgcaaggggactggactactctcggtttgtgggaggaa-ctagtataattgttttgtgtcttctctctatgtgtttgattt |
236 |
Q |
| |
|
|||||||| ||| ||||||||| ||||||| |||||| |||||||||| | |||||| ||||||| | |||||||||| |
|
|
| T |
15522111 |
tgcaagggtactagactactcttagtttgtgagaggaacctagtataatctctctgtgtcatctctctctctgtttgattt |
15522191 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 203
Target Start/End: Complemental strand, 15736240 - 15736190
Alignment:
| Q |
153 |
gaagtgcaaggggactggactactctcggtttgtgggaggaactagtataa |
203 |
Q |
| |
|
||||||||||| || |||||||||||||||||| ||||||||||||||| |
|
|
| T |
15736240 |
gaagtgcaaggcgataagactactctcggtttgtgagaggaactagtataa |
15736190 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 209
Target Start/End: Original strand, 36210716 - 36210778
Alignment:
| Q |
148 |
ccttagaagtgcaagggg-actggactactctcggtttgtgggaggaactagtataattgttt |
209 |
Q |
| |
|
|||| ||||||||||||| ||||||||||| |||||||||| | |||| ||||||||||||| |
|
|
| T |
36210716 |
ccttggaagtgcaagggggactggactacttccggtttgtggaacgaaccagtataattgttt |
36210778 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 206
Target Start/End: Original strand, 17994365 - 17994418
Alignment:
| Q |
153 |
gaagtgcaaggggactggactactctcggtttgtgggaggaactagtataattg |
206 |
Q |
| |
|
|||||||| ||||||||||||||| |||||||| | |||||| |||||||||| |
|
|
| T |
17994365 |
gaagtgcagggggactggactacttccggtttgtagaaggaaccagtataattg |
17994418 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 216
Target Start/End: Original strand, 22317360 - 22317443
Alignment:
| Q |
134 |
ttatagtgaacagcccttagaagtgcaaggggactggactactctcggtttgtgggaggaactagtat--aattgttttgtgtct |
216 |
Q |
| |
|
|||||||||| | ||||| ||||||||| | ||||||||||||| || |||| |||||||| ||||| ||||||||||||||| |
|
|
| T |
22317360 |
ttatagtgaa-atcccttggaagtgcaatgagactggactactcctggattgtaggaggaaccagtataaaattgttttgtgtct |
22317443 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 205
Target Start/End: Original strand, 5718893 - 5718945
Alignment:
| Q |
153 |
gaagtgcaaggggactggactactctcggtttgtgggaggaactagtataatt |
205 |
Q |
| |
|
|||||| |||||||||| |||||||||||||||| ||||||| | ||||||| |
|
|
| T |
5718893 |
gaagtgaaaggggactgaactactctcggtttgtttgaggaaccaatataatt |
5718945 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 194
Target Start/End: Complemental strand, 17133390 - 17133350
Alignment:
| Q |
154 |
aagtgcaaggggactggactactctcggtttgtgggaggaa |
194 |
Q |
| |
|
||||||||||||||||||||||||| ||||| || |||||| |
|
|
| T |
17133390 |
aagtgcaaggggactggactactcttggtttatgagaggaa |
17133350 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 206
Target Start/End: Complemental strand, 33377817 - 33377773
Alignment:
| Q |
162 |
ggggactggactactctcggtttgtgggaggaactagtataattg |
206 |
Q |
| |
|
||||||||||||||| |||||||||| |||||| |||||||||| |
|
|
| T |
33377817 |
ggggactggactacttccggtttgtggaaggaaccagtataattg |
33377773 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 209
Target Start/End: Original strand, 39532314 - 39532370
Alignment:
| Q |
154 |
aagtgcaagggg-actggactactctcggtttgtgggaggaactagtataattgttt |
209 |
Q |
| |
|
|||||||||||| ||||||||||| |||||||||| |||||| || |||||||||| |
|
|
| T |
39532314 |
aagtgcaagggggactggactacttccggtttgtggaaggaaccaggataattgttt |
39532370 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 45; Significance: 9e-17; HSPs: 13)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 90 - 206
Target Start/End: Complemental strand, 22185558 - 22185443
Alignment:
| Q |
90 |
aagtctcttgcttgtgtgcttgagcaaattgtaatatatgagatttatagtgaacagcccttagaagtgcaaggggactggactactctcggtttgtggg |
189 |
Q |
| |
|
|||||||||| | ||||||||||||||||||||| | ||||||| ||| |||| | ||||| |||| |||||||||| ||||||||||||||||| |
|
|
| T |
22185558 |
aagtctcttgttcatgtgcttgagcaaattgtaatttgtgagatt-ataatgaatatcccttggaaggtcaaggggactatactactctcggtttgtgta |
22185460 |
T |
|
| Q |
190 |
aggaactagtataattg |
206 |
Q |
| |
|
|||||| |||||||||| |
|
|
| T |
22185459 |
aggaaccagtataattg |
22185443 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 90 - 216
Target Start/End: Complemental strand, 26013329 - 26013205
Alignment:
| Q |
90 |
aagtctcttgcttgtgtgcttgagcaaattgtaatatatgagatttatagtgaacagcccttagaagtgcaaggggactggactactctcggtttgtggg |
189 |
Q |
| |
|
|||||||||| |||||||||||||| | ||||||| ||||||| |||||||||| | ||||| |||||||||| || |||||||||| ||||||| || |
|
|
| T |
26013329 |
aagtctcttgtttgtgtgcttgagc-atttgtaatctatgaga-ttatagtgaa-atcccttgaaagtgcaaggagattggactactcctggtttgtagg |
26013233 |
T |
|
| Q |
190 |
aggaactagtat-aattgttttgtgtct |
216 |
Q |
| |
|
|||||| | ||| ||||||||||||||| |
|
|
| T |
26013232 |
aggaaccaatataaattgttttgtgtct |
26013205 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 97 - 195
Target Start/End: Complemental strand, 17241157 - 17241057
Alignment:
| Q |
97 |
ttgcttgtgtgcttgagcaaattgtaatatatgagat--ttatagtgaacagcccttagaagtgcaag-gggactggactactctcggtttgtgggagga |
193 |
Q |
| |
|
|||||||||||||||||||| ||||||||| |||||| |||||||||| | ||||| |||||||| | | |||| ||||||||||||||| |||||||| |
|
|
| T |
17241157 |
ttgcttgtgtgcttgagcaatttgtaatatgtgagattattatagtgaa-atcccttggaagtgcatgagagactagactactctcggtttatgggagga |
17241059 |
T |
|
| Q |
194 |
ac |
195 |
Q |
| |
|
|| |
|
|
| T |
17241058 |
ac |
17241057 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 82 - 203
Target Start/End: Complemental strand, 19903154 - 19903036
Alignment:
| Q |
82 |
agcaatataagtctcttgcttgtgtgcttgagcaaattgtaatatatgagatttatagtgaacagcccttagaagtgcaaggggactggactactctcgg |
181 |
Q |
| |
|
||||||| |||||||| ||||||||||||||||| ||||||| | | | |||||| |||| | || || ||||||| |||| ||| |||||||||||| |
|
|
| T |
19903154 |
agcaatagaagtctctcgcttgtgtgcttgagcat-ttgtaatcttagtg-tttatattgaaaatccttttgaagtgccaggg-actagactactctcgg |
19903058 |
T |
|
| Q |
182 |
tttgtgggaggaactagtataa |
203 |
Q |
| |
|
|||||| ||||||||||||||| |
|
|
| T |
19903057 |
tttgtgagaggaactagtataa |
19903036 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 216
Target Start/End: Original strand, 9399329 - 9399398
Alignment:
| Q |
148 |
ccttagaagtgcaagggg-actggactactctcggtttgtgggaggaactagtataattgttttgtgtct |
216 |
Q |
| |
|
|||| ||||||||||||| || ||||||| |||||||||| ||||||| ||||||||||||||||||| |
|
|
| T |
9399329 |
ccttggaagtgcaagggggacatgactacttccggtttgtggaaggaacttgtataattgttttgtgtct |
9399398 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 203
Target Start/End: Original strand, 24495199 - 24495248
Alignment:
| Q |
154 |
aagtgcaaggggactggactactctcggtttgtgggaggaactagtataa |
203 |
Q |
| |
|
||||||||||||||||||||||||| | ||||||||||||| ||||||| |
|
|
| T |
24495199 |
aagtgcaaggggactggactactcttgtgttgtgggaggaaccagtataa |
24495248 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 20215829 - 20215888
Alignment:
| Q |
148 |
ccttagaagtgcaagggg-actggactactctcggtttgtgggaggaactagtataattg |
206 |
Q |
| |
|
|||| ||||||||||||| ||||||||||| |||||||||| |||||| |||||||||| |
|
|
| T |
20215829 |
ccttggaagtgcaagggggactggactacttccggtttgtggaaggaaccagtataattg |
20215888 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 23477800 - 23477741
Alignment:
| Q |
148 |
ccttagaagtgcaag-gggactggactactctcggtttgtgggaggaactagtataattg |
206 |
Q |
| |
|
|||| |||||||||| |||||||||||||| |||||||||| |||||| |||||||||| |
|
|
| T |
23477800 |
ccttggaagtgcaagagggactggactacttccggtttgtggaaggaaccagtataattg |
23477741 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 23487976 - 23487917
Alignment:
| Q |
148 |
ccttagaagtgcaagggg-actggactactctcggtttgtgggaggaactagtataattg |
206 |
Q |
| |
|
|||| ||||||||||||| ||||||||||| |||||||||| |||||| |||||||||| |
|
|
| T |
23487976 |
ccttggaagtgcaagggggactggactacttccggtttgtggaaggaaccagtataattg |
23487917 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 40033451 - 40033510
Alignment:
| Q |
148 |
ccttagaagtgcaagggg-actggactactctcggtttgtgggaggaactagtataattg |
206 |
Q |
| |
|
|||| ||||||||||||| ||||||||||| |||||||||| |||||| |||||||||| |
|
|
| T |
40033451 |
ccttggaagtgcaagggggactggactacttccggtttgtggaaggaaccagtataattg |
40033510 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 217
Target Start/End: Original strand, 643413 - 643483
Alignment:
| Q |
148 |
ccttagaagtgcaagggg-actggactactctcggtttgtgggaggaactagtataattgttttgtgtctt |
217 |
Q |
| |
|
|||| ||||||||||||| || ||||||| |||||||| | ||||||| |||||||||||||||||||| |
|
|
| T |
643413 |
ccttggaagtgcaagggggacatgactacttccggtttgtagaaggaacttgtataattgttttgtgtctt |
643483 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 217
Target Start/End: Original strand, 13546234 - 13546304
Alignment:
| Q |
148 |
ccttagaagtgcaagggg-actggactactctcggtttgtgggaggaactagtataattgttttgtgtctt |
217 |
Q |
| |
|
|||| ||||||||||||| || ||||||| |||||||||| |||||| |||||||||||||||||||| |
|
|
| T |
13546234 |
ccttggaagtgcaagggggacatgactacttccggtttgtggaaggaacctgtataattgttttgtgtctt |
13546304 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 195
Target Start/End: Complemental strand, 22747862 - 22747802
Alignment:
| Q |
134 |
ttatagtgaacagcccttagaagtgcaaggggactggactactctcggtttgtgggaggaac |
195 |
Q |
| |
|
|||||||||| | ||||| |||||||||||||||||||||||||| | || |||||||||| |
|
|
| T |
22747862 |
ttatagtgaa-atcccttggaagtgcaaggggactggactactcttgtgttatgggaggaac |
22747802 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0010 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0010
Description:
Target: scaffold0010; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 81 - 204
Target Start/End: Complemental strand, 135723 - 135602
Alignment:
| Q |
81 |
gagcaatataagtctcttgcttgtgtgcttgagcaaattgtaatatatgagatttatagtgaacagcccttagaagtgcaaggggactggactactctcg |
180 |
Q |
| |
|
|||||||||||||||| | ||||||||||||||||| || |||| | ||||| |||||||||| | ||||| |||||| ||||||| || |||| ||| | |
|
|
| T |
135723 |
gagcaatataagtctcctccttgtgtgcttgagcaatttataatttttgaga-ttatagtgaa-atcccttggaagtgtaaggggattgaactattcttg |
135626 |
T |
|
| Q |
181 |
gtttgtgggaggaactagtataat |
204 |
Q |
| |
|
||||||| ||||||| ||||||| |
|
|
| T |
135625 |
gtttgtgagaggaaccggtataat |
135602 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0010; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 61158 - 61099
Alignment:
| Q |
148 |
ccttagaagtgcaagggg-actggactactctcggtttgtgggaggaactagtataattg |
206 |
Q |
| |
|
|||| ||||||||||||| ||||||||||| |||||||||| |||||| |||||||||| |
|
|
| T |
61158 |
ccttggaagtgcaagggggactggactacttccggtttgtggaaggaaccagtataattg |
61099 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 44; Significance: 4e-16; HSPs: 20)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 147 - 214
Target Start/End: Original strand, 21721638 - 21721705
Alignment:
| Q |
147 |
cccttagaagtgcaaggggactggactactctcggtttgtgggaggaactagtataattgttttgtgt |
214 |
Q |
| |
|
||||| ||||||||| |||| |||| |||||| |||||||||||| |||||||||||||||||||||| |
|
|
| T |
21721638 |
cccttggaagtgcaatgggattggattactcttggtttgtgggagaaactagtataattgttttgtgt |
21721705 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 95 - 194
Target Start/End: Complemental strand, 16422887 - 16422789
Alignment:
| Q |
95 |
tcttgcttgtgtgcttgagcaaattgtaatatatgagatttatagtgaacagcccttagaagtgcaaggggactggactactctcggtttgtgggaggaa |
194 |
Q |
| |
|
|||| |||||||| |||||||||||||||||| ||||| || ||||||| | | || |||||| |||||||| |||| |||| |||||||||||||||| |
|
|
| T |
16422887 |
tcttacttgtgtgtttgagcaaattgtaatatgtgaga-ttgtagtgaaaatactttggaagtgtaaggggacgggacaactcccggtttgtgggaggaa |
16422789 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 134 - 216
Target Start/End: Complemental strand, 30497500 - 30497418
Alignment:
| Q |
134 |
ttatagtgaacagcccttagaagtgcaaggggactggactactctcggtttgtgggaggaactagtataattgttttgtgtct |
216 |
Q |
| |
|
|||||||||| | | ||| |||||| |||| ||||| |||||||||||||||| ||||||| |||||||||| ||| ||||| |
|
|
| T |
30497500 |
ttatagtgaaaatctcttggaagtgaaaggagactgaactactctcggtttgtaagaggaaccagtataattgatttatgtct |
30497418 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 174
Target Start/End: Original strand, 9558749 - 9558830
Alignment:
| Q |
90 |
aagtctcttgcttgtgtgcttgagcaaattgtaatatatgagatttatagtgaacagcccttagaagtgcaaggggactggacta |
174 |
Q |
| |
|
||||||| | ||||||||||||||||| ||||| |||||||| |||||||||| | ||||| ||||||||||| ||||||||| |
|
|
| T |
9558749 |
aagtctcgtacttgtgtgcttgagcaatttgta--atatgaga-ttatagtgaaaattccttaaaagtgcaagggaactggacta |
9558830 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 210
Target Start/End: Original strand, 14969203 - 14969260
Alignment:
| Q |
153 |
gaagtgcaaggggactggactactctcggtttgtgggaggaactagtataattgtttt |
210 |
Q |
| |
|
||||| |||||| ||||||||| |||| |||||||||| |||| |||||||||||||| |
|
|
| T |
14969203 |
gaagtccaagggaactggactagtctcagtttgtgggacgaaccagtataattgtttt |
14969260 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 217
Target Start/End: Original strand, 28492935 - 28493004
Alignment:
| Q |
148 |
ccttagaagtgcaaggggactggactactctcggtttgtgggaggaactagtataattgttttgtgtctt |
217 |
Q |
| |
|
|||| |||||||||||||| |||||||| |||||||||| |||||| ||||||||| |||||||||| |
|
|
| T |
28492935 |
ccttggaagtgcaaggggataggactacttccggtttgtggaaggaacctgtataattgctttgtgtctt |
28493004 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 223
Target Start/End: Complemental strand, 12397264 - 12397193
Alignment:
| Q |
147 |
cccttagaagtgcaaggggactggactactctcggtttgtgggaggaactagtataattgttttgtgtcttctctct |
223 |
Q |
| |
|
||||| ||||||||||||||||||||||||| |||| |||||||| ||||| |||| ||||||||| |||||| |
|
|
| T |
12397264 |
cccttggaagtgcaaggggactggactactc-----ttgtaggaggaaccagtatgattgatttgtgtctgctctct |
12397193 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 12669828 - 12669883
Alignment:
| Q |
148 |
ccttagaagtgcaaggggactggactactctcggtttgtgggaggaactagtataa |
203 |
Q |
| |
|
|||| |||||||||||||||||||||||| | | ||||||||||||| ||||||| |
|
|
| T |
12669828 |
ccttggaagtgcaaggggactggactactattgtgttgtgggaggaaccagtataa |
12669883 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 19019858 - 19019913
Alignment:
| Q |
148 |
ccttagaagtgcaaggggactggactactctcggtttgtgggaggaactagtataa |
203 |
Q |
| |
|
||||| |||||||||||||||||||||||| | ||||||||||||| ||||||| |
|
|
| T |
19019858 |
ccttaaaagtgcaaggggactggactactcatgtattgtgggaggaaccagtataa |
19019913 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 19965857 - 19965911
Alignment:
| Q |
149 |
cttagaagtgcaaggggactggactactctcggtttgtgggaggaactagtataat |
204 |
Q |
| |
|
||||||||||||| ||||||| ||||||||||||||||| || |||| |||||||| |
|
|
| T |
19965857 |
cttagaagtgcaacgggactgaactactctcggtttgtgaga-gaaccagtataat |
19965911 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 21541231 - 21541172
Alignment:
| Q |
148 |
ccttagaagtgcaagggg-actggactactctcggtttgtgggaggaactagtataattg |
206 |
Q |
| |
|
|||| ||||||||||||| ||||||||||| |||||||||| |||||| |||||||||| |
|
|
| T |
21541231 |
ccttggaagtgcaagggggactggactacttccggtttgtggaaggaaccagtataattg |
21541172 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 22018758 - 22018699
Alignment:
| Q |
148 |
ccttagaagtgcaagggg-actggactactctcggtttgtgggaggaactagtataattg |
206 |
Q |
| |
|
|||| ||||||||||||| ||||||||||| |||||||||| |||||| |||||||||| |
|
|
| T |
22018758 |
ccttggaagtgcaagggggactggactacttccggtttgtggaaggaaccagtataattg |
22018699 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 23926489 - 23926430
Alignment:
| Q |
148 |
ccttagaagtgcaagggg-actggactactctcggtttgtgggaggaactagtataattg |
206 |
Q |
| |
|
|||| ||||||||||||| ||||||||||| |||||||||| |||||| |||||||||| |
|
|
| T |
23926489 |
ccttggaagtgcaagggggactggactacttccggtttgtggaaggaaccagtataattg |
23926430 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 26548911 - 26548970
Alignment:
| Q |
148 |
ccttagaagtgcaagggg-actggactactctcggtttgtgggaggaactagtataattg |
206 |
Q |
| |
|
|||| ||||||||||||| ||||||||||| |||||||||| |||||| |||||||||| |
|
|
| T |
26548911 |
ccttggaagtgcaagggggactggactacttccggtttgtggaaggaaccagtataattg |
26548970 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 217
Target Start/End: Complemental strand, 2834052 - 2834014
Alignment:
| Q |
179 |
cggtttgtgggaggaactagtataattgttttgtgtctt |
217 |
Q |
| |
|
|||||||||| ||||||| |||||||||||||||||||| |
|
|
| T |
2834052 |
cggtttgtggaaggaacttgtataattgttttgtgtctt |
2834014 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 217
Target Start/End: Complemental strand, 12283849 - 12283779
Alignment:
| Q |
148 |
ccttagaagtgcaagggg-actggactactctcggtttgtgggaggaactagtataattgttttgtgtctt |
217 |
Q |
| |
|
|||| ||||||||||||| || ||||||| |||||||||| |||||| |||||||||||||||||||| |
|
|
| T |
12283849 |
ccttggaagtgcaagggggacatgactacttccggtttgtggaaggaacctgtataattgttttgtgtctt |
12283779 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 206
Target Start/End: Complemental strand, 22642285 - 22642231
Alignment:
| Q |
153 |
gaagtgcaagggg-actggactactctcggtttgtgggaggaactagtataattg |
206 |
Q |
| |
|
||||||||||||| ||||||||||| |||||||||| |||||| |||||||||| |
|
|
| T |
22642285 |
gaagtgcaagggggactggactacttccggtttgtggaaggaaccagtataattg |
22642231 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 204
Target Start/End: Original strand, 31587494 - 31587544
Alignment:
| Q |
154 |
aagtgcaaggggactggactactctcggtttgtgggaggaactagtataat |
204 |
Q |
| |
|
|||||||||| || ||||||||||| | ||||| ||||||||||||||||| |
|
|
| T |
31587494 |
aagtgcaaggagattggactactcttgatttgtaggaggaactagtataat |
31587544 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 209
Target Start/End: Original strand, 45071247 - 45071309
Alignment:
| Q |
148 |
ccttagaagtgcaagggg-actggactactctcggtttgtgggaggaactagtataattgttt |
209 |
Q |
| |
|
|||| ||||||||||||| ||||||||||| |||||||||| |||||| || |||||||||| |
|
|
| T |
45071247 |
ccttggaagtgcaagggggactggactacttccggtttgtggaaggaaccaggataattgttt |
45071309 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 205
Target Start/End: Complemental strand, 31910754 - 31910706
Alignment:
| Q |
157 |
tgcaaggggactggactactctcggtttgtgggaggaactagtataatt |
205 |
Q |
| |
|
|||||||||||||||||||||| | ||||||||||||| |||||||| |
|
|
| T |
31910754 |
tgcaaggggactggactactcttgtaatgtgggaggaactggtataatt |
31910706 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 17)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 217
Target Start/End: Complemental strand, 19264293 - 19264087
Alignment:
| Q |
10 |
attttattaagttagattggagacgtctcttttctgtgtgattgagcgataaaagtctatttcttgtatga--gagcaatataagtctcttgcttgtgtg |
107 |
Q |
| |
|
|||| |||||||||||||| ||| |||||||| |||||||||||| ||| |||||| || |||||||| ||||| |||||||||||||||||| |
|
|
| T |
19264293 |
atttgattaagttagattgtagaagtctctttcttgtgtgattgagaaatagaagtctctt-cttgtatggttgagcataggaagtctcttgcttgtgtg |
19264195 |
T |
|
| Q |
108 |
cttgagcaaattgtaatatatgagatttatagtgaacagcccttagaagtgcaaggggactggactactctcggtttgtgggaggaactagtataattgt |
207 |
Q |
| |
|
|||||||| ||||||| | | ||||| ||| | || | | ||| ||||||||||||| || |||||||| | |||| |||||||||| | |||||||| |
|
|
| T |
19264194 |
attgagcaatttgtaatctttcagatt-atatttaa-atctcttggaagtgcaagggggctagactactcccagtttatgggaggaaccaatataattgc |
19264097 |
T |
|
| Q |
208 |
tttgtgtctt |
217 |
Q |
| |
|
| |||||||| |
|
|
| T |
19264096 |
tatgtgtctt |
19264087 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 90 - 187
Target Start/End: Complemental strand, 27685604 - 27685507
Alignment:
| Q |
90 |
aagtctcttgcttgtgtgcttgagcaaattgtaata-tatgagatttatagtgaacagcccttagaagtgcaaggggactggactactctcggtttgtg |
187 |
Q |
| |
|
||||||||| |||||||| |||||||||||||||| | || |||| |||||||| | ||||||||||||||| ||||| |||||||||| ||||||| |
|
|
| T |
27685604 |
aagtctcttacttgtgtgtttgagcaaattgtaatcctgtgtgatt-atagtgaaaattccttagaagtgcaagaggactagactactctcagtttgtg |
27685507 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 217
Target Start/End: Complemental strand, 16032021 - 16031953
Alignment:
| Q |
149 |
cttagaagtgcaaggggactggactactctcggtttgtgggaggaactagtataattgttttgtgtctt |
217 |
Q |
| |
|
||||||||||||||||||| ||||||| ||||||||||| |||||| ||||||||| ||| |||||| |
|
|
| T |
16032021 |
cttagaagtgcaaggggacaagactactttcggtttgtggaaggaacctgtataattgatttatgtctt |
16031953 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 216
Target Start/End: Complemental strand, 4501013 - 4500950
Alignment:
| Q |
154 |
aagtgcaaggggactggactactctcggtttgtgggaggaactagtat-aattgttttgtgtct |
216 |
Q |
| |
|
||||||||||||||| ||||||| |||||| ||| || |||||||||| ||||||||||||||| |
|
|
| T |
4501013 |
aagtgcaaggggactagactactatcggttagtgagatgaactagtataaattgttttgtgtct |
4500950 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 216
Target Start/End: Complemental strand, 19905353 - 19905286
Alignment:
| Q |
149 |
cttagaagtgcaaggggactggactactctcggtttgtgggaggaactagtataattgttttgtgtct |
216 |
Q |
| |
|
||||||||| ||||||||||||||||||| | |||| |||||||| ||||||||||||||||||| |
|
|
| T |
19905353 |
cttagaagtacaaggggactggactactcatagattgtaggaggaacctgtataattgttttgtgtct |
19905286 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 154 - 236
Target Start/End: Complemental strand, 47596683 - 47596601
Alignment:
| Q |
154 |
aagtgcaaggggactggactactctcggtttgtgggaggaactagtataattgttttgtgtcttctctctatgtgtttgattt |
236 |
Q |
| |
|
|||||||||| ||||| || ||||||| ||||| |||| ||||| |||||||||||||||| ||| | ||||||| |||||| |
|
|
| T |
47596683 |
aagtgcaaggagactgaacgactctcgatttgtaggagaaactaatataattgttttgtgttctctatatatgtgtgtgattt |
47596601 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 207
Target Start/End: Complemental strand, 49989688 - 49989628
Alignment:
| Q |
148 |
ccttagaagtgcaagggg-actggactactctcggtttgtgggaggaactagtataattgt |
207 |
Q |
| |
|
|||| ||||||||||||| ||||||||||| |||||||||| |||||| ||||||||||| |
|
|
| T |
49989688 |
ccttggaagtgcaagggggactggactacttccggtttgtggaaggaaccagtataattgt |
49989628 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 13147720 - 13147661
Alignment:
| Q |
148 |
ccttagaagtgcaagggg-actggactactctcggtttgtgggaggaactagtataattg |
206 |
Q |
| |
|
|||| ||||||||||||| ||||||||||| |||||||||| |||||| |||||||||| |
|
|
| T |
13147720 |
ccttggaagtgcaagggggactggactacttccggtttgtggaaggaaccagtataattg |
13147661 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 13953690 - 13953631
Alignment:
| Q |
148 |
ccttagaagtgcaagggg-actggactactctcggtttgtgggaggaactagtataattg |
206 |
Q |
| |
|
|||| ||||||||||||| ||||||||||| |||||||||| |||||| |||||||||| |
|
|
| T |
13953690 |
ccttggaagtgcaagggggactggactacttccggtttgtggaaggaaccagtataattg |
13953631 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 15832835 - 15832776
Alignment:
| Q |
148 |
ccttagaagtgcaagggg-actggactactctcggtttgtgggaggaactagtataattg |
206 |
Q |
| |
|
|||| ||||||||||||| ||||||||||| |||||||||| |||||| |||||||||| |
|
|
| T |
15832835 |
ccttggaagtgcaagggggactggactacttccggtttgtggaaggaaccagtataattg |
15832776 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 31114594 - 31114653
Alignment:
| Q |
148 |
ccttagaagtgcaagggg-actggactactctcggtttgtgggaggaactagtataattg |
206 |
Q |
| |
|
|||| ||||||||||||| ||||||||||| |||||||||| |||||| |||||||||| |
|
|
| T |
31114594 |
ccttggaagtgcaagggggactggactacttccggtttgtggaaggaaccagtataattg |
31114653 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 177
Target Start/End: Complemental strand, 11073912 - 11073852
Alignment:
| Q |
116 |
aattgtaatata-tgagatttatagtgaacagcccttagaagtgcaaggggactggactactc |
177 |
Q |
| |
|
|||||||||||| ||||||| |||||||| | | ||||||||||||||||||||||||||||| |
|
|
| T |
11073912 |
aattgtaatatagtgagatt-atagtgaa-atctcttagaagtgcaaggggactggactactc |
11073852 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 209
Target Start/End: Original strand, 13292239 - 13292301
Alignment:
| Q |
147 |
cccttagaagtgcaaggggactggactactctcggtttgtgggaggaactagtataattgttt |
209 |
Q |
| |
|
||||| |||||||||||||||| |||| |||| || |||| ||||||| ||||||||||||| |
|
|
| T |
13292239 |
cccttggaagtgcaaggggactagactcctcttggattgtttgaggaaccagtataattgttt |
13292301 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 217
Target Start/End: Complemental strand, 13931423 - 13931353
Alignment:
| Q |
148 |
ccttagaagtgcaa-ggggactggactactctcggtttgtgggaggaactagtataattgttttgtgtctt |
217 |
Q |
| |
|
||||||| |||||| ||||||||||||||| ||| |||||| |||||| || |||| ||||||||||||| |
|
|
| T |
13931423 |
ccttagatgtgcaaaggggactggactacttccggattgtggaaggaaccaggataactgttttgtgtctt |
13931353 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 216
Target Start/End: Original strand, 14427715 - 14427773
Alignment:
| Q |
159 |
caaggggactggactactctcggtttgtgggaggaactagtataa-ttgttttgtgtct |
216 |
Q |
| |
|
||||||||||||||||||| ||||||| |||||||| ||||||| |||| |||||||| |
|
|
| T |
14427715 |
caaggggactggactactcatggtttgtaggaggaaccagtataagttgtcttgtgtct |
14427773 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 217
Target Start/End: Complemental strand, 20724515 - 20724445
Alignment:
| Q |
148 |
ccttagaagtgcaagggg-actggactactctcggtttgtgggaggaactagtataattgttttgtgtctt |
217 |
Q |
| |
|
|||| ||||||||||||| || |||||||| |||||||||| |||||| ||||||||||||||||||| |
|
|
| T |
20724515 |
ccttggaagtgcaagggggacaggactacttccggtttgtggaaggaacctatataattgttttgtgtctt |
20724445 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 214
Target Start/End: Complemental strand, 4234904 - 4234846
Alignment:
| Q |
154 |
aagtgcaaggggactggactactctcggtttgtgggaggaactagtataattgttttgtgt |
214 |
Q |
| |
|
|||||||||||| ||| |||||| ||||||||| ||| |||||||||||||| ||||||| |
|
|
| T |
4234904 |
aagtgcaagggggctgaactactttcggtttgt--gagaaactagtataattgatttgtgt |
4234846 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 12)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 148 - 209
Target Start/End: Complemental strand, 40002646 - 40002584
Alignment:
| Q |
148 |
ccttagaagtgcaagggg-actggactactctcggtttgtgggaggaactagtataattgttt |
209 |
Q |
| |
|
|||||||||||||||||| ||||||||||| |||||||||| |||||| ||||||||||||| |
|
|
| T |
40002646 |
ccttagaagtgcaagggggactggactacttccggtttgtggaaggaaccagtataattgttt |
40002584 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 203
Target Start/End: Complemental strand, 18565401 - 18565355
Alignment:
| Q |
157 |
tgcaaggggactggactactctcggtttgtgggaggaactagtataa |
203 |
Q |
| |
|
|||||||||||||||||||||| | ||||||||||||||||||||| |
|
|
| T |
18565401 |
tgcaaggggactggactactcttgtgttgtgggaggaactagtataa |
18565355 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 148 - 217
Target Start/End: Complemental strand, 19942656 - 19942586
Alignment:
| Q |
148 |
ccttagaagtgcaagggg-actggactactctcggtttgtgggaggaactagtataattgttttgtgtctt |
217 |
Q |
| |
|
|||| ||||||||||||| || |||||||| ||||||||||| |||||| ||||||||| |||||||||| |
|
|
| T |
19942656 |
ccttggaagtgcaagggggacaggactactttcggtttgtggaaggaacctgtataattgctttgtgtctt |
19942586 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 148 - 209
Target Start/End: Original strand, 23271817 - 23271879
Alignment:
| Q |
148 |
ccttagaagtgcaagggg-actggactactctcggtttgtgggaggaactagtataattgttt |
209 |
Q |
| |
|
|||| ||||||||||||| ||||||||||| |||||||||| |||||||||| ||||||||| |
|
|
| T |
23271817 |
ccttggaagtgcaagggggactggactacttccggtttgtggaaggaactagtttaattgttt |
23271879 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 147 - 205
Target Start/End: Complemental strand, 30213800 - 30213742
Alignment:
| Q |
147 |
cccttagaagtgcaaggggactggactactctcggtttgtgggaggaactagtataatt |
205 |
Q |
| |
|
||||| |||||||||||||||||||||||||||| ||||| ||||||| |||||||| |
|
|
| T |
30213800 |
cccttggaagtgcaaggggactggactactctcgaattgtgagaggaacatgtataatt |
30213742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 225
Target Start/End: Complemental strand, 20311255 - 20311183
Alignment:
| Q |
154 |
aagtgcaaggggactggactactctcggtttgtgggaggaactagtat-aattgttttgtgtcttctctctat |
225 |
Q |
| |
|
||||||||||||||| |||||||||| ||||| | ||||||||||| ||||||| |||||||||| ||||| |
|
|
| T |
20311255 |
aagtgcaaggggactatactactctcgatttgtaaggggaactagtataaattgttatgtgtcttctatctat |
20311183 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 225
Target Start/End: Complemental strand, 21104892 - 21104820
Alignment:
| Q |
154 |
aagtgcaaggggactggactactctcggtttgtgggaggaactagtat-aattgttttgtgtcttctctctat |
225 |
Q |
| |
|
||||||||||||||| |||||||||| ||||| | ||||||||||| ||||||| |||||||||| ||||| |
|
|
| T |
21104892 |
aagtgcaaggggactatactactctcgatttgtaaggggaactagtataaattgttatgtgtcttctatctat |
21104820 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 23363774 - 23363715
Alignment:
| Q |
148 |
ccttagaagtgcaagggg-actggactactctcggtttgtgggaggaactagtataattg |
206 |
Q |
| |
|
|||| ||||||||||||| ||||||||||| |||||||||| ||||||||| ||||||| |
|
|
| T |
23363774 |
ccttggaagtgcaagggggactggactacttccggtttgtggaaggaactaggataattg |
23363715 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 29379027 - 29378968
Alignment:
| Q |
148 |
ccttagaagtgcaagggg-actggactactctcggtttgtgggaggaactagtataattg |
206 |
Q |
| |
|
|||| ||||||||||||| ||||||||||| |||||||||| |||||| |||||||||| |
|
|
| T |
29379027 |
ccttggaagtgcaagggggactggactacttccggtttgtggaaggaaccagtataattg |
29378968 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 126
Target Start/End: Original strand, 20049770 - 20049812
Alignment:
| Q |
84 |
caatataagtctcttgcttgtgtgcttgagcaaattgtaatat |
126 |
Q |
| |
|
|||| |||||||||| |||||||| |||||||||||||||||| |
|
|
| T |
20049770 |
caatgtaagtctcttacttgtgtgtttgagcaaattgtaatat |
20049812 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 22212012 - 22212061
Alignment:
| Q |
160 |
aaggggactggactactctcggtttgtgggaggaactagtataattgttt |
209 |
Q |
| |
|
||||||||||||||||| |||||||||| |||||| || |||||||||| |
|
|
| T |
22212012 |
aaggggactggactacttccggtttgtggaaggaaccaggataattgttt |
22212061 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 216
Target Start/End: Complemental strand, 18557470 - 18557402
Alignment:
| Q |
148 |
ccttagaagtgcaaggggactggactactctcggtttgtgggaggaactagtataattgttttgtgtct |
216 |
Q |
| |
|
|||| |||||||||||||| ||||||||| ||| |||||| || ||| | |||||||| ||||||||| |
|
|
| T |
18557470 |
ccttggaagtgcaaggggagtggactacttccggattgtggaagaaaccactataattgctttgtgtct |
18557402 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 38; Significance: 0.000000000001; HSPs: 18)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 217
Target Start/End: Original strand, 15478467 - 15478536
Alignment:
| Q |
148 |
ccttagaagtgcaaggggactggactactctcggtttgtgggaggaactagtataattgttttgtgtctt |
217 |
Q |
| |
|
|||| |||||||||||||||||||||||| ||| |||||| |||||| | |||||||||||||||||| |
|
|
| T |
15478467 |
ccttggaagtgcaaggggactggactacttccggattgtggaaggaaccaagataattgttttgtgtctt |
15478536 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 203
Target Start/End: Complemental strand, 34659420 - 34659352
Alignment:
| Q |
134 |
ttatagtgaacagcccttagaagtgcaaggggactggactactctcggtttgtgggaggaactagtataa |
203 |
Q |
| |
|
|||||||||| | ||||||||||| |||||||||||||||||||| | ||||||||||||| ||||||| |
|
|
| T |
34659420 |
ttatagtgaa-atcccttagaagtacaaggggactggactactcttgtgttgtgggaggaaccagtataa |
34659352 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 20396365 - 20396309
Alignment:
| Q |
147 |
cccttagaagtgcaaggggactggactactctcggtttgtgggaggaactagtataa |
203 |
Q |
| |
|
||||| |||||||||||| |||||||||||| || ||||| |||||||||||||||| |
|
|
| T |
20396365 |
cccttggaagtgcaagggtactggactactcccgttttgtaggaggaactagtataa |
20396309 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 153 - 203
Target Start/End: Original strand, 30701958 - 30702008
Alignment:
| Q |
153 |
gaagtgcaaggggactggactactctcggtttgtgggaggaactagtataa |
203 |
Q |
| |
|
|||||||||||||| || | ||||||||||||||||||||||| ||||||| |
|
|
| T |
30701958 |
gaagtgcaaggggattgaaatactctcggtttgtgggaggaaccagtataa |
30702008 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 217
Target Start/End: Complemental strand, 19470109 - 19470025
Alignment:
| Q |
134 |
ttatagtgaacagcccttagaagtgcaagggg-actggactactctcggtttgtgggaggaactagtataattgttttgtgtctt |
217 |
Q |
| |
|
||||||||||| |||||||||||| ||||| || ||||||| |||||||||| ||||||| |||||||| ||||||||||| |
|
|
| T |
19470109 |
ttatagtgaactctccttagaagtgctagggggacatgactacttccggtttgtggaaggaacttgtataatttttttgtgtctt |
19470025 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 7586877 - 7586936
Alignment:
| Q |
148 |
ccttagaagtgcaagggg-actggactactctcggtttgtgggaggaactagtataattg |
206 |
Q |
| |
|
|||| ||||||||||||| ||||||||||| |||||||||| |||||| |||||||||| |
|
|
| T |
7586877 |
ccttggaagtgcaagggggactggactacttccggtttgtggaaggaaccagtataattg |
7586936 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 222
Target Start/End: Complemental strand, 11704777 - 11704714
Alignment:
| Q |
160 |
aaggggactggactactctcggtttgtgggaggaactagtataa-ttgttttgtgtcttctctc |
222 |
Q |
| |
|
|||||||||||||||||| | ||||| |||||||| |||||| ||||||||||||||||||| |
|
|
| T |
11704777 |
aaggggactggactactcctgatttgtaggaggaacgggtataaattgttttgtgtcttctctc |
11704714 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 17609027 - 17609086
Alignment:
| Q |
148 |
ccttagaagtgcaaggg-gactggactactctcggtttgtgggaggaactagtataattg |
206 |
Q |
| |
|
|||| |||||||||||| |||||||||||| |||||||||| |||||| |||||||||| |
|
|
| T |
17609027 |
ccttggaagtgcaagggagactggactacttccggtttgtggaaggaaccagtataattg |
17609086 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 203
Target Start/End: Complemental strand, 20395729 - 20395674
Alignment:
| Q |
148 |
ccttagaagtgcaaggggactggactactctcggtttgtgggaggaactagtataa |
203 |
Q |
| |
|
|||| ||||||||||||||||||||||||| || ||| | |||||||| ||||||| |
|
|
| T |
20395729 |
ccttggaagtgcaaggggactggactactcccgttttctaggaggaaccagtataa |
20395674 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 20396048 - 20395977
Alignment:
| Q |
147 |
cccttagaagtgcaaggggactggactactctcggtttgtgggaggaactagtataat-tgttttgtgtctt |
217 |
Q |
| |
|
||||| |||||||||||||||| |||| |||||| ||| | |||||||||||||| || |||||||| |||| |
|
|
| T |
20396048 |
cccttggaagtgcaaggggactcgactcctctcgttttctaggaggaactagtatgatatgttttgtttctt |
20395977 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 20635149 - 20635090
Alignment:
| Q |
148 |
ccttagaagtgcaagggg-actggactactctcggtttgtgggaggaactagtataattg |
206 |
Q |
| |
|
|||| ||||||||||||| ||||||||||| |||||||||| |||||| |||||||||| |
|
|
| T |
20635149 |
ccttggaagtgcaagggggactggactacttccggtttgtggaaggaaccagtataattg |
20635090 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 21127659 - 21127600
Alignment:
| Q |
148 |
ccttagaagtgcaagggg-actggactactctcggtttgtgggaggaactagtataattg |
206 |
Q |
| |
|
|||| ||||||||||||| ||||||||||| |||||||||| |||||| |||||||||| |
|
|
| T |
21127659 |
ccttggaagtgcaagggggactggactacttccggtttgtggaaggaaccagtataattg |
21127600 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 209
Target Start/End: Original strand, 12953716 - 12953778
Alignment:
| Q |
148 |
ccttagaagtgcaagggg-actggactactctcggtttgtgggaggaactagtataattgttt |
209 |
Q |
| |
|
|||| ||||||||||||| ||||||||||| |||||||||| |||||| || |||||||||| |
|
|
| T |
12953716 |
ccttggaagtgcaagggggactggactacttccggtttgtggaaggaaccaggataattgttt |
12953778 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 175 - 216
Target Start/End: Original strand, 1830091 - 1830132
Alignment:
| Q |
175 |
ctctcggtttgtgggaggaactagtataattgttttgtgtct |
216 |
Q |
| |
|
||||||||||||||||||||| | |||||||| ||||||||| |
|
|
| T |
1830091 |
ctctcggtttgtgggaggaaccaatataattgatttgtgtct |
1830132 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 206
Target Start/End: Original strand, 17742322 - 17742375
Alignment:
| Q |
154 |
aagtgcaagggg-actggactactctcggtttgtgggaggaactagtataattg |
206 |
Q |
| |
|
|||||||||||| ||||||||||| |||||||||| ||||||||| ||||||| |
|
|
| T |
17742322 |
aagtgcaagggggactggactacttccggtttgtggaaggaactaggataattg |
17742375 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 205
Target Start/End: Complemental strand, 15586118 - 15586078
Alignment:
| Q |
165 |
gactggactactctcggtttgtgggaggaactagtataatt |
205 |
Q |
| |
|
||||||||||| || ||||||||||||||| |||||||||| |
|
|
| T |
15586118 |
gactggactacacttggtttgtgggaggaattagtataatt |
15586078 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 20395375 - 20395319
Alignment:
| Q |
147 |
cccttagaagtgcaaggggactggactactctcggtttgtgggaggaactagtataa |
203 |
Q |
| |
|
|||||||||||||||| |||||||||||||| || ||| | |||| ||| ||||||| |
|
|
| T |
20395375 |
cccttagaagtgcaagaggactggactactcccgttttctaggagaaaccagtataa |
20395319 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 217
Target Start/End: Original strand, 24729246 - 24729310
Alignment:
| Q |
154 |
aagtgcaagggg-actggactactctcggtttgtgggaggaactagtataattgttttgtgtctt |
217 |
Q |
| |
|
|||||||||||| || ||||||| ||| |||||| ||||||| |||||||||||||||||||| |
|
|
| T |
24729246 |
aagtgcaagggggacaagactacttccggattgtggaaggaacttgtataattgttttgtgtctt |
24729310 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0026 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0026
Description:
Target: scaffold0026; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 217
Target Start/End: Complemental strand, 7353 - 7284
Alignment:
| Q |
148 |
ccttagaagtgcaaggggactggactactctcggtttgtgggaggaactagtataattgttttgtgtctt |
217 |
Q |
| |
|
|||| |||||||||||||| |||||||| ||||||||||| |||||| ||||||||| | |||||||| |
|
|
| T |
7353 |
ccttggaagtgcaaggggataggactactttcggtttgtggaaggaacctgtataattgctatgtgtctt |
7284 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0177 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0177
Description:
Target: scaffold0177; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 207
Target Start/End: Original strand, 21057 - 21117
Alignment:
| Q |
148 |
ccttagaagtgcaagggg-actggactactctcggtttgtgggaggaactagtataattgt |
207 |
Q |
| |
|
|||| ||||||||||||| ||||||||||| |||||||||| |||||| ||||||||||| |
|
|
| T |
21057 |
ccttggaagtgcaagggggactggactacttccggtttgtggaaggaaccagtataattgt |
21117 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1507 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1507
Description:
Target: scaffold1507; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 32 - 91
Alignment:
| Q |
148 |
ccttagaagtgcaagggg-actggactactctcggtttgtgggaggaactagtataattg |
206 |
Q |
| |
|
|||| ||||||||||||| ||||||||||| |||||||||| |||||| |||||||||| |
|
|
| T |
32 |
ccttggaagtgcaagggggactggactacttccggtttgtggaaggaaccagtataattg |
91 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0771 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0771
Description:
Target: scaffold0771; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 5830 - 5771
Alignment:
| Q |
148 |
ccttagaagtgcaagggg-actggactactctcggtttgtgggaggaactagtataattg |
206 |
Q |
| |
|
|||| ||||||||||||| ||||||||||| |||||||||| |||||| |||||||||| |
|
|
| T |
5830 |
ccttggaagtgcaagggggactggactacttccggtttgtggaaggaaccagtataattg |
5771 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0655 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0655
Description:
Target: scaffold0655; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 4544 - 4485
Alignment:
| Q |
148 |
ccttagaagtgcaagggg-actggactactctcggtttgtgggaggaactagtataattg |
206 |
Q |
| |
|
|||| ||||||||||||| ||||||||||| |||||||||| |||||| |||||||||| |
|
|
| T |
4544 |
ccttggaagtgcaagggggactggactacttccggtttgtggaaggaaccagtataattg |
4485 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0443 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0443
Description:
Target: scaffold0443; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 1655 - 1714
Alignment:
| Q |
148 |
ccttagaagtgcaagggg-actggactactctcggtttgtgggaggaactagtataattg |
206 |
Q |
| |
|
|||| ||||||||||||| ||||||||||| |||||||||| |||||| |||||||||| |
|
|
| T |
1655 |
ccttggaagtgcaagggggactggactacttccggtttgtggaaggaaccagtataattg |
1714 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0050 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0050
Description:
Target: scaffold0050; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 35045 - 34986
Alignment:
| Q |
148 |
ccttagaagtgcaagggga-ctggactactctcggtttgtgggaggaactagtataattg |
206 |
Q |
| |
|
|||| |||||||||||| | |||||||||| ||||||||||| |||||| |||||||||| |
|
|
| T |
35045 |
ccttggaagtgcaagggaaactggactactttcggtttgtggaaggaaccagtataattg |
34986 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1747 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1747
Description:
Target: scaffold1747; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 217
Target Start/End: Complemental strand, 750 - 680
Alignment:
| Q |
148 |
ccttagaagtgcaaggggact-ggactactctcggtttgtgggaggaactagtataattgttttgtgtctt |
217 |
Q |
| |
|
|||| ||||||||||||| | |||||||| ||||||||||| | |||| |||||||||||||||||||| |
|
|
| T |
750 |
ccttggaagtgcaagggggataggactactttcggtttgtggaaagaacctgtataattgttttgtgtctt |
680 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1745 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1745
Description:
Target: scaffold1745; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 217
Target Start/End: Original strand, 661 - 731
Alignment:
| Q |
148 |
ccttagaagtgcaaggggact-ggactactctcggtttgtgggaggaactagtataattgttttgtgtctt |
217 |
Q |
| |
|
|||| ||||||||||||| | |||||||| ||||||||||| | |||| |||||||||||||||||||| |
|
|
| T |
661 |
ccttggaagtgcaagggggataggactactttcggtttgtggaaagaacctgtataattgttttgtgtctt |
731 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1657 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1657
Description:
Target: scaffold1657; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 214
Target Start/End: Complemental strand, 1270 - 1204
Alignment:
| Q |
148 |
ccttagaagtgcaaggggactggactactctcggtttgtgggaggaactagtataattgttttgtgt |
214 |
Q |
| |
|
|||| |||||||||||||| ||||||| |||||||||| ||||||| ||||||||| ||||||| |
|
|
| T |
1270 |
ccttggaagtgcaaggggatatgactacttccggtttgtggaaggaacttgtataattgctttgtgt |
1204 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0570 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0570
Description:
Target: scaffold0570; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 209
Target Start/End: Original strand, 2356 - 2418
Alignment:
| Q |
148 |
ccttagaagtgcaaggg-gactggactactctcggtttgtgggaggaactagtataattgttt |
209 |
Q |
| |
|
|||| |||||||||||| |||||||||||| || ||||||| |||||| ||||||||||||| |
|
|
| T |
2356 |
ccttggaagtgcaagggagactggactacttccgatttgtggaaggaaccagtataattgttt |
2418 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0544 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0544
Description:
Target: scaffold0544; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 209
Target Start/End: Original strand, 10405 - 10467
Alignment:
| Q |
148 |
ccttagaagtgcaagggg-actggactactctcggtttgtgggaggaactagtataattgttt |
209 |
Q |
| |
|
|||| ||||||||||||| ||||||||||| |||||||||| |||||| || |||||||||| |
|
|
| T |
10405 |
ccttggaagtgcaagggggactggactacttccggtttgtggaaggaaccaggataattgttt |
10467 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0163 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0163
Description:
Target: scaffold0163; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 217
Target Start/End: Complemental strand, 25888 - 25818
Alignment:
| Q |
148 |
ccttagaagtgcaaggggactggact-actctcggtttgtgggaggaactagtataattgttttgtgtctt |
217 |
Q |
| |
|
|||| ||||||||||||||| ||||| ||| |||||||||| |||||| ||||||||| |||||||||| |
|
|
| T |
25888 |
ccttggaagtgcaaggggacaggactgacttccggtttgtggaaggaacctgtataattgctttgtgtctt |
25818 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0017 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0017
Description:
Target: scaffold0017; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 209
Target Start/End: Original strand, 59540 - 59602
Alignment:
| Q |
148 |
ccttagaagtgcaaggg-gactggactactctcggtttgtgggaggaactagtataattgttt |
209 |
Q |
| |
|
|||| |||||||||||| |||||||||||| ||||||||| |||||| ||||||||||||| |
|
|
| T |
59540 |
ccttggaagtgcaagggagactggactacttctggtttgtggaaggaaccagtataattgttt |
59602 |
T |
|
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Target: scaffold0009 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0009
Description:
Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 213
Target Start/End: Complemental strand, 268211 - 268145
Alignment:
| Q |
148 |
ccttagaagtgcaaggggact-ggactactctcggtttgtgggaggaactagtataattgttttgtg |
213 |
Q |
| |
|
|||| |||||||||||||| | |||||||| |||||||||| |||||| |||||||||||||||| |
|
|
| T |
268211 |
ccttggaagtgcaaggggaataggactacttccggtttgtggaaggaacctgtataattgttttgtg |
268145 |
T |
|
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Target: scaffold0004 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0004
Description:
Target: scaffold0004; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 216
Target Start/End: Complemental strand, 382227 - 382158
Alignment:
| Q |
149 |
cttagaagtgcaaggggactggactactctcggtttgtgggaggaactagtata--attgttttgtgtct |
216 |
Q |
| |
|
||||||| |||||||||| |||||||||| | |||||| ||||||||||||| |||||||||||||| |
|
|
| T |
382227 |
cttagaactgcaaggggagtggactactcctgtgttgtggaaggaactagtatatgattgttttgtgtct |
382158 |
T |
|
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Target: scaffold0530 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0530
Description:
Target: scaffold0530; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 148 - 217
Target Start/End: Original strand, 2699 - 2768
Alignment:
| Q |
148 |
ccttagaagtgcaaggggactggactactctcggtttgtgggaggaactagtataattgttttgtgtctt |
217 |
Q |
| |
|
|||| |||||||||||| || |||||||| |||||||||| |||||| |||||||| |||||||||| |
|
|
| T |
2699 |
ccttggaagtgcaagggcacaggactacttccggtttgtggaaggaacctatataattgctttgtgtctt |
2768 |
T |
|
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Target: scaffold0103 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0103
Description:
Target: scaffold0103; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 223
Target Start/End: Complemental strand, 16147 - 16058
Alignment:
| Q |
134 |
ttatagtgaacagcccttagaagtgcaaggggactggactactctcggtttgtgggaggaactagtataattgttttgtgtcttctctct |
223 |
Q |
| |
|
|||||||||| | | ||| ||||||||||||| || ||||||||| || |||| |||| ||| |||||||| ||||||||| |||||| |
|
|
| T |
16147 |
ttatagtgaaaatcactttgaagtgcaagggggcttgactactcttggattgtaggagaaacctgtataattactttgtgtctgctctct |
16058 |
T |
|
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Target: scaffold0035 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0035
Description:
Target: scaffold0035; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 217
Target Start/End: Original strand, 20157 - 20222
Alignment:
| Q |
153 |
gaagtgcaagggg-actggactactctcggtttgtgggaggaactagtataattgttttgtgtctt |
217 |
Q |
| |
|
||||||||||||| || |||||||| |||||||||| |||||| ||||||||||||||| |||| |
|
|
| T |
20157 |
gaagtgcaagggggacaggactacttccggtttgtggaaggaacctgtataattgttttgtatctt |
20222 |
T |
|
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