View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2580_high_21 (Length: 352)
Name: NF2580_high_21
Description: NF2580
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2580_high_21 |
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Alignment Details
Target: chr1 (Bit Score: 211; Significance: 1e-115; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 115 - 329
Target Start/End: Complemental strand, 40299911 - 40299697
Alignment:
| Q |
115 |
gatgatagggttgtcaacaattggtgccttgttacgcaccaaaaccagatattgttagatatcagagtcctaatctgaggttaaattcatttgaggaatc |
214 |
Q |
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| T |
40299911 |
gatgatagggttgtcaacaattggtgccttgttacgcaccaaaaccagatattgttagatatcagagtcctaatctgaggttaaattcatttgaggaatc |
40299812 |
T |
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| Q |
215 |
aagaatgacgatatcgaaagagtggttcaattcaaatcagtttgttgattttgatttgtcagctttaaagccaatggttattgatgtacaaggtgtgtag |
314 |
Q |
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| T |
40299811 |
aagaatgacgacatcgaaagagtggttcaattcaaatcagtttgttgattttgatttgtcagctttaaagccaatggttattgatgtacaaggtgtgtag |
40299712 |
T |
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| Q |
315 |
ccaatttattgaatt |
329 |
Q |
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| T |
40299711 |
ccaatttattgaatt |
40299697 |
T |
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