View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2580_high_44 (Length: 249)
Name: NF2580_high_44
Description: NF2580
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2580_high_44 |
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Alignment Details
Target: chr7 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 32227449 - 32227692
Alignment:
| Q |
1 |
cctccattttggtactgagaaagatgaaagtgtgnnnnnnngttcgttttgtggttgtcatgacaatgggaggaattgtgtagaataaaagagtagtcag |
100 |
Q |
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| T |
32227449 |
cctccattttggtactaagaaagatgaaagtgtgtttttttgttctttttgtggttgtcatgacaatgggaggaattgtgtagaataaaagagtagtcag |
32227548 |
T |
|
| Q |
101 |
tggacatgtttttgtgttcctctctcttgaactaaggttgggactgctctacgatgtattgtttataatttttggtggataacatctacataaattatct |
200 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32227549 |
tggacatgtttttgtgttcctctctcttgaac-aaggttgggactgctctacgatgtattgtttataatttttggtggataacatctacataaattatct |
32227647 |
T |
|
| Q |
201 |
tgaatgtttcagtatagatcgtttgatgttaaagttcatctctct |
245 |
Q |
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|||||||| |||||||||||||||||||||||||||||| ||||| |
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| T |
32227648 |
tgaatgttccagtatagatcgtttgatgttaaagttcatttctct |
32227692 |
T |
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