View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2580_high_61 (Length: 203)
Name: NF2580_high_61
Description: NF2580
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2580_high_61 |
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Alignment Details
Target: chr5 (Bit Score: 183; Significance: 3e-99; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 183; E-Value: 3e-99
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 9054778 - 9054592
Alignment:
| Q |
1 |
cacacacacctcaacaacgttagctcctgagaatcggtgcttttgttgccaaatatactcgccgagaattacagcagaaggccagacgtataagccgtaa |
100 |
Q |
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| T |
9054778 |
cacacacacctcaacaacgttagctcctgagaatcggtgcttttcttgccaaatatactcgccgagaattacagcagaaggccagacgtataagccgtaa |
9054679 |
T |
|
| Q |
101 |
tcctcgctcatattctgtgtggaaaatcagagtgtttgttagtgtgagatttcggcgtgagaaaatgcgaatttgggaagtggaagt |
187 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9054678 |
tcctcgctcatattctgtgtggaaaatcagagtgtttgttagtgtgagatttcggcgtgagaaaatgcgaatttgggaagtggaagt |
9054592 |
T |
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