View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2580_low_25 (Length: 343)
Name: NF2580_low_25
Description: NF2580
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2580_low_25 |
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Alignment Details
Target: chr5 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 212 - 315
Target Start/End: Complemental strand, 32986695 - 32986591
Alignment:
| Q |
212 |
ttgtttgattagattctgctaccaatctcattgatgctatgttgctttctac-ttttcaggtagttgacaccaatccaaccaaaggtatttttcctataa |
310 |
Q |
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| T |
32986695 |
ttgtttgatttgattctgctaccaatctcattgatgctatgttgctttgtactttttcaggtagttaacaccaatacaaccaaaggtatttttcctttaa |
32986596 |
T |
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| Q |
311 |
tcaat |
315 |
Q |
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||||| |
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| T |
32986595 |
tcaat |
32986591 |
T |
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