View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2580_low_41 (Length: 250)
Name: NF2580_low_41
Description: NF2580
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2580_low_41 |
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Alignment Details
Target: chr3 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 38612650 - 38612889
Alignment:
| Q |
1 |
tgtaagcaactcgttaatcatatgttatctttgtttttacatagaaattgaggtattcaattatgatctacaatggaagagtagcttgtgtgtttcttta |
100 |
Q |
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| T |
38612650 |
tgtaagcaactcgttaatcatatgttatctttgtttttacatagaaattgaggtattcaattatgatctacaatggaagagtagcttgtgtgtttcttta |
38612749 |
T |
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| Q |
101 |
tgatttcttgttttttgacctattaatgttgcaattgtttactaacttcagttttgcaaatatgggagtcgtgattatctgtgcaatttatcttttgacg |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | |
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| T |
38612750 |
tgatttcttgttttttgacctattaatgttgcaattgtttactaacttcagttttgcaaatatggtagtcgtgattatctgtgcaatttatcttttgatg |
38612849 |
T |
|
| Q |
201 |
cttctctcgaaaacaaatttagttagtgttagcccctttg |
240 |
Q |
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||||||||||||||||||||||||||||||||||||||| |
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| T |
38612850 |
tttctctcgaaaacaaatttagttagtgttagcccctttg |
38612889 |
T |
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