View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2580_low_59 (Length: 227)
Name: NF2580_low_59
Description: NF2580
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2580_low_59 |
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Alignment Details
Target: chr1 (Bit Score: 177; Significance: 1e-95; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 177; E-Value: 1e-95
Query Start/End: Original strand, 7 - 205
Target Start/End: Complemental strand, 6609277 - 6609078
Alignment:
| Q |
7 |
cattctttggtccaaacaggtacaactgcaaagattgcatagtaactttacctatcagccttcatttccaaaaataggaaagaagtagaaa---aatatt |
103 |
Q |
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| T |
6609277 |
cattctttggtccaaacaggtacaactgcaaagattgcatagtaactttacctatcagccttcatttccaaaaataggaaagaagtagaaaaataatatt |
6609178 |
T |
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| Q |
104 |
tcaataagttcacatacacttgctctagcaaaactataaaaaatttactactagaaaatgttaaatttatacagaaatttatagagtacatatatagaaa |
203 |
Q |
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|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6609177 |
tcaataagttcacatacacttgctctagcaaaac--taaaaaatttactactagaaaatgttaaatttatacagaaatttatagagtacatatatagaaa |
6609080 |
T |
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