View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2580_low_8 (Length: 463)
Name: NF2580_low_8
Description: NF2580
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2580_low_8 |
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Alignment Details
Target: chr7 (Bit Score: 384; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 384; E-Value: 0
Query Start/End: Original strand, 25 - 456
Target Start/End: Original strand, 32226905 - 32227336
Alignment:
| Q |
25 |
tattagtttgttaaatattttcaggagactttgttagcacacatggtctacgctttggagactccattatggtttaccaagataatcacaatcacaatta |
124 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
32226905 |
tattagtttgttaaatattttcaggagactttgttagcacacatggtctacgctttggagactccattatggtttaccaagataatcaaaatcacaatta |
32227004 |
T |
|
| Q |
125 |
tgtatgagcttaacaagaaaactaaggggaactaattctttttcaattctaaaattccattaatctcttcttaaccatgtannnnnnnncctgtcatatg |
224 |
Q |
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| T |
32227005 |
tgtatgagcttaacaagaaaactaaggggaactaattctttttcaattctaaaattccattaatctcttcttaaccatgtattttttttcctgtcatatg |
32227104 |
T |
|
| Q |
225 |
cattactacaggtaattcaggcagagaaagcttgtgatcaagatgagtatatggaagaagctaatgatacaatcaagcatatcttggtctatgattagga |
324 |
Q |
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||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| ||||||| || |
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| T |
32227105 |
cattactacaggtaattcaggcaaagaaagcttgtgatcaagatgagtatatggaagaagctaatgatacaatcaatcatatcttcgtcgatgattatga |
32227204 |
T |
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| Q |
325 |
ggtgaacaaaagttgctttgatgtagcttatcctgcaatgaatgatacaagcatgtcatttatatatgacacaaccatctcaaatgattcaccacttgat |
424 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32227205 |
ggtgaacaaaagttgctttgatgtagcttatcctgcaatgaatgatacaagcatgtcatttatatatgacacaaccatctcaaatgattcaccacttgat |
32227304 |
T |
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| Q |
425 |
tttttgggtggatcaatgacaaactactcaag |
456 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
32227305 |
tttttgggtggatcaatgacaaactactcaag |
32227336 |
T |
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