View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2581_low_7 (Length: 275)
Name: NF2581_low_7
Description: NF2581
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2581_low_7 |
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Alignment Details
Target: chr5 (Bit Score: 250; Significance: 1e-139; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 11 - 260
Target Start/End: Original strand, 6917165 - 6917414
Alignment:
| Q |
11 |
aagaaatgttttgttccttttccttgcatctcacgccgccaaatcttaactgttccatcagctgaaccggtaaaaaccaaaccatcaaatccaacaacta |
110 |
Q |
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| T |
6917165 |
aagaaatgttttgttccttttccttgcatctcacgccgccaaatcttaactgttccatcagctgaaccggtaaaaaccaaaccatcaaatccaacaacta |
6917264 |
T |
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| Q |
111 |
gcgcgttaacagcgtcatcatgagctgttactgattctaaacatttgtaatttgaagcacgccaaaccttaaaagtcttatcccacgaagcagagtaaat |
210 |
Q |
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| T |
6917265 |
gcgcgttaacagcgtcatcatgagctgttactgattctaaacatttgtaatttgaagcacgccaaaccttaaaagtcttatcccacgaagcagagtaaat |
6917364 |
T |
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| Q |
211 |
taacgaaagatcttccgttagacttaaacacgaaattgcatcataatgtt |
260 |
Q |
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| T |
6917365 |
taacgaaagatcttccgttagacttaaacacgaaattgcatcataatgtt |
6917414 |
T |
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