View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2581_low_8 (Length: 251)
Name: NF2581_low_8
Description: NF2581
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2581_low_8 |
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Alignment Details
Target: chr1 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 11 - 235
Target Start/End: Original strand, 32125797 - 32126021
Alignment:
| Q |
11 |
atattcatactgacataaaaattcagcttttgactaaggggaagagtaatgtttagtgatgtagagtaagttgatgtttattagattatttgttttcaac |
110 |
Q |
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| T |
32125797 |
atattcatactgacataaaaattcagcttttgactaaggggaagagtaatgtttagtgatgtagagtaagttgatgttcattagattatttgttttcaac |
32125896 |
T |
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| Q |
111 |
gattaaagaatttcatatatattacacaatggttttatatcaacccacatttggtgtttgttcttcattcattaaccattaacggtcacttaacgaaaag |
210 |
Q |
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| T |
32125897 |
gattacagaatttcatatatattacacaatggttttatatcaacccacatttggtgtttgttcttctttcattaaccattaacggtcacttaacgaaaag |
32125996 |
T |
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| Q |
211 |
gataattgagaaatcaaatagttga |
235 |
Q |
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||||||||||||||||||||||||| |
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| T |
32125997 |
gataattgagaaatcaaatagttga |
32126021 |
T |
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