View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2582_low_4 (Length: 512)
Name: NF2582_low_4
Description: NF2582
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2582_low_4 |
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Alignment Details
Target: chr7 (Bit Score: 436; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 436; E-Value: 0
Query Start/End: Original strand, 1 - 452
Target Start/End: Complemental strand, 37859587 - 37859136
Alignment:
| Q |
1 |
aaatctagctggagtttccttcaagctttaacagaaactaacaaaactgaaaatgcaaatggtaaagtctatgttcatcctactgtgaaacgttcctcat |
100 |
Q |
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| T |
37859587 |
aaatctagctggagtttccttcaagctttaacagaaactaacaaaattgaaaatgcaaatggtaacgtctatgttcatcctactgtgaaacgttcctcat |
37859488 |
T |
|
| Q |
101 |
caatgctaagtgaaaagagcttagaaatgtgcactgaaagccttgggagtgaaactggtagcaatgctggtgaaagtagtgatattgatgtttcattatt |
200 |
Q |
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| T |
37859487 |
caatgctaagtgaaaagagcttagaaatgtgcactgaaagccttgggagtgaaactggtagcaatgctggtgaaagtagtgatattgatgtttcattatt |
37859388 |
T |
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| Q |
201 |
ttcttctgacacaagaaatgatgttaacaataacaacatgaataattgtgtgtctagaagagttaataaagctccttgtaactttcctccaccactcaca |
300 |
Q |
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| T |
37859387 |
ttcttctgacacaagaaatgatgttaacaataacaacatgaataattgtgtgtctagaagagttaataaagcttcttgtaactttcctccaccactcact |
37859288 |
T |
|
| Q |
301 |
tcaataactgattttggtggtgttcatgttaggcctcatcgcgaaggtggtaggttgatattagaagctattgcttctccttctactactccttatttcc |
400 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37859287 |
tcaataactgattttggtggtgttcatgttaggcctcatcgcgaaggtggtaggttgatattagaagctattgcttctccttctactactccttatttcc |
37859188 |
T |
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| Q |
401 |
atgcagaacgtgttgatggtaggcttaggttgagtatttttgagactgtttt |
452 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37859187 |
atgcagaacgtgttgatggtaggcttaggttgagtatttttgagactgtttt |
37859136 |
T |
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