View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2583-Insertion-3 (Length: 393)

Name: NF2583-Insertion-3
Description: NF2583
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2583-Insertion-3
NF2583-Insertion-3
[»] chr1 (1 HSPs)
chr1 (8-393)||(26969619-26970004)


Alignment Details
Target: chr1 (Bit Score: 335; Significance: 0; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 335; E-Value: 0
Query Start/End: Original strand, 8 - 393
Target Start/End: Original strand, 26969619 - 26970004
Alignment:
Q  8 tctaacttcaccacctgcaagtcgatcgtcgttgtcgaaaacatggacttctgttgttgggtctcttttgccaactacggcttctcttgcattctcgtag 107  Q
    |||||||||||||| || |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  26969619 tctaacttcaccacgtgtaagtcgatcgtcattgtcgaaaacatggacttctgttgttgggtcccttttgccaactacagcttctcttgcattctcgtag 26969718  T
Q  108 gtgtcctgaacagccttcatcactgatccaattacaccgggcttctcttgatcatgttgttcttttgttacactgattt-cttcaacgtgtcttggttgt 206  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  26969719 gtgtcatgaacagccttcatcactgaaccaattacaccgggcttctcttgatcatgttgttcttttgtta-actgattttcttcaacgtgtcttggttgt 26969817  T
Q  207 tttgatgccatttgaagaagaagaattaatgtagctttagtttttgttgtgtttttcttttctagtaagataagattgaaatgaaatgagcttgtttact 306  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  26969818 tttgatcccatttgaagaagaagaattaatgtagctttagtttttgttgtgtgtttcttttctagtaagataagattgaaatgaaatgagcttgtttact 26969917  T
Q  307 aagttttgttgtagagtatagaacctatatataagtgacaacttcccatatataaatatacgaattgtgctagtgctcaaggttata 393  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26969918 aagttttgttgtagagtatagaacctatatataagtgacaacttcccatatataaatatacgaattgtgctagtgctcaaggttata 26970004  T

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