View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2583R-Insertion-11 (Length: 1050)

Name: NF2583R-Insertion-11
Description: NF2583R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2583R-Insertion-11
NF2583R-Insertion-11
[»] chr2 (36 HSPs)
chr2 (8-317)||(12355905-12356214)
chr2 (483-545)||(12356299-12356361)
chr2 (794-935)||(20552969-20553117)
chr2 (794-935)||(22068320-22068467)
chr2 (792-889)||(32360867-32360971)
chr2 (794-933)||(3668113-3668259)
chr2 (792-935)||(30486248-30486398)
chr2 (794-928)||(44587947-44588088)
chr2 (794-935)||(31438684-31438832)
chr2 (794-935)||(34442533-34442680)
chr2 (794-935)||(26387064-26387212)
chr2 (851-972)||(561581-561708)
chr2 (794-933)||(4381835-4381981)
chr2 (794-933)||(27856396-27856542)
chr2 (793-935)||(22887788-22887937)
chr2 (830-935)||(31390050-31390160)
chr2 (845-935)||(8969464-8969555)
chr2 (215-303)||(12395021-12395109)
chr2 (845-935)||(27584776-27584867)
chr2 (845-935)||(38296215-38296306)
chr2 (794-935)||(5093540-5093687)
chr2 (816-933)||(6580229-6580351)
chr2 (412-454)||(12356205-12356247)
chr2 (802-934)||(38590883-38591021)
chr2 (794-890)||(35851750-35851854)
chr2 (800-935)||(43637202-43637343)
chr2 (794-935)||(28601005-28601152)
chr2 (850-928)||(32860147-32860226)
chr2 (847-928)||(26891722-26891804)
chr2 (795-890)||(4022480-4022582)
chr2 (796-890)||(1859245-1859346)
chr2 (794-935)||(22567640-22567788)
chr2 (786-935)||(2898109-2898265)
chr2 (830-935)||(11021260-11021370)
chr2 (845-890)||(13574086-13574132)
chr2 (845-928)||(39531869-39531952)
[»] chr3 (32 HSPs)
chr3 (794-933)||(39074459-39074604)
chr3 (806-935)||(2505387-2505523)
chr3 (793-972)||(46352630-46352821)
chr3 (793-935)||(272258-272407)
chr3 (801-935)||(858627-858768)
chr3 (791-928)||(10617281-10617425)
chr3 (794-935)||(48725309-48725457)
chr3 (845-935)||(41553997-41554088)
chr3 (795-890)||(49529269-49529369)
chr3 (788-935)||(49893369-49893523)
chr3 (794-933)||(52520721-52520867)
chr3 (791-928)||(7468456-7468598)
chr3 (794-968)||(43786871-43787057)
chr3 (845-935)||(50395620-50395710)
chr3 (816-935)||(41304043-41304165)
chr3 (828-935)||(2119469-2119579)
chr3 (793-890)||(6842702-6842806)
chr3 (845-935)||(13159935-13160026)
chr3 (315-382)||(14853396-14853464)
chr3 (845-935)||(22248924-22249015)
chr3 (794-928)||(4168228-4168369)
chr3 (794-890)||(11308211-11308313)
chr3 (794-935)||(40362580-40362728)
chr3 (800-935)||(42548133-42548274)
chr3 (845-928)||(21010042-21010122)
chr3 (845-933)||(20924032-20924121)
chr3 (845-933)||(53489881-53489970)
chr3 (845-928)||(24488411-24488495)
chr3 (831-935)||(28139347-28139456)
chr3 (845-935)||(42964306-42964397)
chr3 (845-921)||(33140937-33141014)
chr3 (793-890)||(52552557-52552659)
[»] chr8 (36 HSPs)
chr8 (794-970)||(27988500-27988687)
chr8 (794-970)||(28045802-28045989)
chr8 (791-935)||(34228720-34228871)
chr8 (793-935)||(16888543-16888692)
chr8 (794-971)||(168463-168652)
chr8 (800-935)||(16890486-16890628)
chr8 (792-935)||(43119255-43119404)
chr8 (795-933)||(30675574-30675718)
chr8 (845-935)||(33357186-33357277)
chr8 (845-935)||(36730482-36730573)
chr8 (822-935)||(29444170-29444288)
chr8 (800-890)||(39406925-39407020)
chr8 (792-890)||(16394059-16394164)
chr8 (794-925)||(4537744-4537882)
chr8 (801-935)||(2805267-2805408)
chr8 (793-935)||(20831552-20831701)
chr8 (845-970)||(4648193-4648323)
chr8 (794-935)||(11112677-11112825)
chr8 (794-928)||(13643057-13643197)
chr8 (794-928)||(13743482-13743622)
chr8 (845-935)||(37373243-37373334)
chr8 (850-935)||(7304580-7304666)
chr8 (845-937)||(10870388-10870481)
chr8 (830-935)||(42035019-42035129)
chr8 (830-933)||(12203894-12204002)
chr8 (830-933)||(12448322-12448430)
chr8 (847-933)||(21595886-21595973)
chr8 (800-935)||(9253908-9254049)
chr8 (851-970)||(16785085-16785209)
chr8 (845-935)||(40831315-40831406)
chr8 (853-934)||(3930298-3930380)
chr8 (822-935)||(32113946-32114065)
chr8 (865-934)||(34192814-34192883)
chr8 (846-890)||(22956788-22956833)
chr8 (850-890)||(24843341-24843382)
chr8 (845-928)||(42433601-42433684)
[»] chr7 (30 HSPs)
chr7 (791-970)||(24798400-24798590)
chr7 (794-933)||(42044294-42044439)
chr7 (791-935)||(4628604-4628755)
chr7 (794-933)||(34333324-34333469)
chr7 (802-935)||(47083093-47083232)
chr7 (793-935)||(29993486-29993635)
chr7 (802-935)||(30810693-30810833)
chr7 (793-933)||(24438517-24438664)
chr7 (794-934)||(12218437-12218583)
chr7 (830-935)||(47839530-47839640)
chr7 (850-949)||(27456175-27456277)
chr7 (830-969)||(5239284-5239433)
chr7 (816-928)||(23363191-23363308)
chr7 (794-935)||(34606299-34606447)
chr7 (820-935)||(28587947-28588067)
chr7 (800-890)||(13064882-13064980)
chr7 (847-935)||(34546373-34546462)
chr7 (785-889)||(525067-525177)
chr7 (845-935)||(8754642-8754733)
chr7 (318-389)||(15644696-15644767)
chr7 (845-935)||(18485999-18486090)
chr7 (794-923)||(37674106-37674240)
chr7 (816-933)||(45045810-45045932)
chr7 (865-928)||(11686402-11686465)
chr7 (845-890)||(7689257-7689303)
chr7 (789-843)||(34556887-34556941)
chr7 (845-890)||(47118046-47118092)
chr7 (316-389)||(17507479-17507552)
chr7 (316-389)||(17545662-17545735)
chr7 (845-928)||(43594093-43594177)
[»] chr6 (28 HSPs)
chr6 (794-935)||(26467124-26467272)
chr6 (793-933)||(3515806-3515953)
chr6 (794-933)||(392136-392282)
chr6 (794-933)||(32929508-32929654)
chr6 (800-928)||(32985199-32985334)
chr6 (847-949)||(34477609-34477714)
chr6 (791-935)||(35043928-35044077)
chr6 (845-933)||(12525759-12525848)
chr6 (847-935)||(20897986-20898075)
chr6 (793-935)||(12145116-12145265)
chr6 (845-935)||(18276672-18276763)
chr6 (794-937)||(2580988-2581138)
chr6 (794-933)||(4215735-4215881)
chr6 (830-935)||(29451153-29451263)
chr6 (794-935)||(23402176-23402324)
chr6 (791-935)||(1391175-1391326)
chr6 (845-935)||(2350690-2350781)
chr6 (794-933)||(27433532-27433678)
chr6 (830-935)||(7851197-7851307)
chr6 (794-935)||(25165413-25165561)
chr6 (845-935)||(21878404-21878495)
chr6 (857-935)||(34396596-34396675)
chr6 (793-928)||(31280366-31280502)
chr6 (845-928)||(961054-961138)
chr6 (802-928)||(11115106-11115236)
chr6 (830-890)||(5323483-5323548)
chr6 (845-935)||(34851906-34851997)
chr6 (816-890)||(1840271-1840350)
[»] chr5 (17 HSPs)
chr5 (789-968)||(34650828-34651018)
chr5 (794-935)||(35132560-35132707)
chr5 (794-928)||(11957967-11958108)
chr5 (794-935)||(13661846-13661994)
chr5 (793-933)||(10054352-10054498)
chr5 (845-928)||(11846117-11846201)
chr5 (793-934)||(9721607-9721754)
chr5 (847-935)||(19647717-19647806)
chr5 (794-933)||(35504241-35504386)
chr5 (845-933)||(12506336-12506425)
chr5 (794-928)||(40564404-40564545)
chr5 (845-935)||(13470189-13470280)
chr5 (794-933)||(8787379-8787525)
chr5 (847-935)||(10070007-10070095)
chr5 (852-928)||(21547458-21547535)
chr5 (866-934)||(4837296-4837364)
chr5 (845-928)||(20175272-20175356)
[»] chr4 (36 HSPs)
chr4 (793-933)||(43944547-43944693)
chr4 (794-934)||(36395138-36395285)
chr4 (794-933)||(4089182-4089328)
chr4 (801-934)||(50619125-50619264)
chr4 (793-935)||(12356282-12356431)
chr4 (830-935)||(19503143-19503253)
chr4 (791-933)||(789527-789676)
chr4 (785-926)||(29591236-29591384)
chr4 (793-927)||(54897354-54897495)
chr4 (794-933)||(16536088-16536234)
chr4 (845-968)||(28755621-28755749)
chr4 (845-933)||(15186283-15186372)
chr4 (845-928)||(32202537-32202621)
chr4 (793-933)||(4268821-4268968)
chr4 (845-923)||(30387191-30387270)
chr4 (845-935)||(39843945-39844036)
chr4 (823-934)||(52533816-52533932)
chr4 (794-933)||(18067879-18068025)
chr4 (794-947)||(33108673-33108834)
chr4 (820-890)||(47231900-47231975)
chr4 (794-933)||(43202384-43202529)
chr4 (822-934)||(46148978-46149095)
chr4 (793-890)||(5091611-5091713)
chr4 (845-933)||(7768978-7769067)
chr4 (847-927)||(46688264-46688345)
chr4 (830-934)||(3783539-3783648)
chr4 (845-928)||(6164138-6164222)
chr4 (865-928)||(32217090-32217153)
chr4 (865-928)||(42898824-42898887)
chr4 (865-935)||(4220233-4220303)
chr4 (794-890)||(16820935-16821038)
chr4 (845-933)||(37987975-37988064)
chr4 (847-935)||(54054586-54054675)
chr4 (847-935)||(54945837-54945926)
chr4 (846-922)||(55882734-55882811)
chr4 (845-889)||(31680520-31680565)
[»] chr1 (35 HSPs)
chr1 (794-973)||(17333284-17333472)
chr1 (794-935)||(15227777-15227925)
chr1 (794-935)||(51065748-51065896)
chr1 (794-924)||(5694370-5694507)
chr1 (794-928)||(29657816-29657957)
chr1 (845-935)||(9266785-9266876)
chr1 (845-935)||(19031872-19031963)
chr1 (800-935)||(12072068-12072210)
chr1 (822-928)||(36446355-36446466)
chr1 (795-933)||(38162890-38163035)
chr1 (791-890)||(48383108-48383214)
chr1 (793-935)||(30294380-30294529)
chr1 (794-935)||(47010031-47010179)
chr1 (791-935)||(24178460-24178611)
chr1 (845-935)||(48071520-48071611)
chr1 (794-928)||(18043207-18043348)
chr1 (800-947)||(42769996-42770152)
chr1 (845-928)||(35985678-35985762)
chr1 (788-890)||(45449238-45449347)
chr1 (845-935)||(3097697-3097788)
chr1 (845-935)||(3784770-3784861)
chr1 (847-933)||(29210453-29210540)
chr1 (845-935)||(45431316-45431407)
chr1 (845-935)||(6770375-6770466)
chr1 (794-933)||(38701937-38702079)
chr1 (845-922)||(13961262-13961340)
chr1 (794-933)||(14350279-14350423)
chr1 (845-937)||(12306954-12307046)
chr1 (845-889)||(14881036-14881081)
chr1 (845-935)||(38335207-38335298)
chr1 (865-935)||(15282592-15282662)
chr1 (830-889)||(41730392-41730456)
chr1 (789-834)||(23789491-23789537)
chr1 (846-927)||(37503260-37503341)
chr1 (845-933)||(51368842-51368931)
[»] scaffold0264 (1 HSPs)
scaffold0264 (794-935)||(22999-23147)
[»] scaffold0188 (1 HSPs)
scaffold0188 (794-935)||(6110-6258)
[»] scaffold0021 (1 HSPs)
scaffold0021 (823-935)||(116242-116359)
[»] scaffold0674 (1 HSPs)
scaffold0674 (847-949)||(7956-8061)
[»] scaffold0549 (1 HSPs)
scaffold0549 (847-949)||(7310-7415)
[»] scaffold1152 (1 HSPs)
scaffold1152 (792-935)||(716-865)
[»] scaffold0034 (1 HSPs)
scaffold0034 (823-890)||(95616-95687)
[»] scaffold0002 (1 HSPs)
scaffold0002 (845-935)||(146962-147053)
[»] scaffold0003 (1 HSPs)
scaffold0003 (794-933)||(53685-53831)
[»] scaffold0190 (1 HSPs)
scaffold0190 (816-928)||(14941-15058)
[»] scaffold0524 (1 HSPs)
scaffold0524 (845-935)||(863-954)
[»] scaffold0425 (1 HSPs)
scaffold0425 (793-890)||(10793-10897)
[»] scaffold0325 (1 HSPs)
scaffold0325 (823-935)||(17502-17618)
[»] scaffold0206 (1 HSPs)
scaffold0206 (847-935)||(11029-11118)
[»] scaffold0007 (1 HSPs)
scaffold0007 (850-890)||(233936-233977)


Alignment Details
Target: chr2 (Bit Score: 274; Significance: 1e-153; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 8 - 317
Target Start/End: Original strand, 12355905 - 12356214
Alignment:
Q  8 aacatcacctccactgtgccatttttgtacccaaagaaagagtcagaaatcacgaactttcaatcttgataaaatcacaaactaggctgaagtgagggtc 107  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  12355905 aacatcacctccactgtgcaatttttgtacccaaagaaagagtcagaaatcacgaactttcaatcttgagaaaatcacaaactaggctgaagtgagggtc 12356004  T
Q  108 attgaaaacataggactcaatctaatctcagatacgagataaaatatcacttaaatatttacgcactttcgaaatttgaaaatcaaattgagatgattag 207  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  12356005 attgaaaacataggactcaatctaatctcagatacgagataaaacatcacttaaatatttacgcactttcgaaatttgcaaatcaaattgagatgattag 12356104  T
Q  208 agttatccatgaggtatgtgattacagttttacaaagatcacaagaaccaagcatagtggttatcgaatttgcttttgtggcatcaaatggcatataagt 307  Q
    |||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  12356105 agttatccatgaggaatgtaattacagttttacaaagatcacaagagccaagcatagtggttatcgaatttgcttttgtggcatcaaatggcatataagc 12356204  T
Q  308 gtgtcgcttg 317  Q
    |||| |||||    
T  12356205 gtgttgcttg 12356214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 483 - 545
Target Start/End: Original strand, 12356299 - 12356361
Alignment:
Q  483 caagcttgaaaagaagaaggaaacaatggccaaagattacaaggatcaaacgccagttccatt 545  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  12356299 caagcttgaaaagaagaaggaaacaatggctaaagattacaaggatcaaacgccagttccatt 12356361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 794 - 935
Target Start/End: Complemental strand, 20553117 - 20552969
Alignment:
Q  794 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactg-ttttgactttattatgaattaa 886  Q
    ||||| ||||||||||||||||  ||||| ||||| | ||||||||||||||||    ||||||||||||||||||| ||||||||||||||| ||||||    
T  20553117 gggtcctgctaaccggtgcccccggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatcaattaa 20553018  T
Q  887 ttaccacattttccatgta-taactactatataatttccttttccatatc 935  Q
    ||| |||| |||| ||| | ||| ||||||||||||||||||| ||||||    
T  20553017 tta-cacaatttcaatgcattaattactatataatttcctttttcatatc 20552969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 794 - 935
Target Start/End: Original strand, 22068320 - 22068467
Alignment:
Q  794 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactg-ttttgactttattatgaattaa 886  Q
    ||||| |||||| |||||||||  ||||| ||||| | ||||||||||||||||    ||||||||||||||||||| ||||||||||||||| ||||||    
T  22068320 gggtcctgctaatcggtgcccccggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatcaattaa 22068419  T
Q  887 ttaccacattttccatgtataactactatataatttccttttccatatc 935  Q
    |||  ||| |||| ||| ||||||||||||||||| |||||| ||||||    
T  22068420 tta-tacaatttcaatgcataactactatataattccctttttcatatc 22068467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 792 - 889
Target Start/End: Original strand, 32360867 - 32360971
Alignment:
Q  792 ttgggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactg-ttttgactttattatgaatt 884  Q
    ||||||| ||||||||||||||||  ||||||||||| | ||||||||||||||||    ||||||||||||||||||| ||||||||||||||| ||||    
T  32360867 ttgggtcctgctaaccggtgcccccggggcattggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatcaatt 32360966  T
Q  885 aatta 889  Q
    |||||    
T  32360967 aatta 32360971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 794 - 933
Target Start/End: Original strand, 3668113 - 3668259
Alignment:
Q  794 gggtcatgctaaccggtgcc--ccgggcattggttgaacataccataaaagg----gattaccataaaaggaaactg-ttttgactttattatgaattaa 886  Q
    ||||| ||||||||||||||  | ||||| ||||| ||||||| ||||||||     |||||||||||||||||||| ||||||| ||||||| ||||||    
T  3668113 gggtcttgctaaccggtgccctcggggcactggttaaacatactataaaaggaaattattaccataaaaggaaactgtttttgacattattataaattaa 3668212  T
Q  887 ttaccacattttccatgta-taactactatataatttccttttccata 933  Q
    ||| |||| |||| ||| | ||||||||||||||||||||||||||||    
T  3668213 tta-cacaatttcaatgcattaactactatataatttccttttccata 3668259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 792 - 935
Target Start/End: Complemental strand, 30486398 - 30486248
Alignment:
Q  792 ttgggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactg-ttttgactttattatgaatt 884  Q
    ||||||| ||||||||||||||||  ||||| ||||| | ||||||||||||||||    ||||||||||||||||||| |||||||||||||||   ||    
T  30486398 ttgggtcctgctaaccggtgcccccggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatagttt 30486299  T
Q  885 aattaccacattttccatgta-taactactatataatttccttttccatatc 935  Q
    ||||| |||| |||| ||  | ||||||||||||||||||||||| ||||||    
T  30486298 aatta-cacaatttcaatacattaactactatataatttcctttttcatatc 30486248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 794 - 928
Target Start/End: Complemental strand, 44588088 - 44587947
Alignment:
Q  794 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactg-ttttgactttattatgaattaa 886  Q
    ||||| ||||||||||| ||||  ||||| | ||| | ||||||||||||||||    ||||||||||||||||||| |||| |||||||||| ||||||    
T  44588088 gggtcctgctaaccggtacccccggggcacttgttaagcataccataaaagggaattattaccataaaaggaaactgttttttactttattataaattaa 44587989  T
Q  887 ttaccacattttccatgta-taactactatataatttcctttt 928  Q
    ||| |||| |||| ||||| |||||||||||||||||||||||    
T  44587988 tta-cacaatttcaatgtattaactactatataatttcctttt 44587947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 794 - 935
Target Start/End: Complemental strand, 31438832 - 31438684
Alignment:
Q  794 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttt-gactttattatgaattaa 886  Q
    ||||| |||||||||||| |||  ||||| ||||| | ||||||||||||||||    ||| ||||||||||||||||||| ||||||||||| ||||||    
T  31438832 gggtcctgctaaccggtgtccccggggcactggttaagcataccataaaagggaattattatcataaaaggaaactgtttttgactttattataaattaa 31438733  T
Q  887 ttaccacattttccatgtat-aactactatataatttccttttccatatc 935  Q
    |||| ||| |||| ||| || ||||||| |||||||||||||| ||||||    
T  31438732 ttac-acaatttcaatgcattaactactgtataatttcctttttcatatc 31438684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 794 - 935
Target Start/End: Original strand, 34442533 - 34442680
Alignment:
Q  794 gggtcatgctaaccggtgcccc-gggcattggttgaacataccataaaaggg----attaccataaaaggaaactg-ttttgactttattatgaattaat 887  Q
    ||||| ||||||||| |||||| ||||| ||||| | |||||||||||||||    ||||||||||||| |||||| ||||||||||||||| |||||||    
T  34442533 gggtcctgctaaccgatgcccccgggcactggttaagcataccataaaagggaattattaccataaaagaaaactgtttttgactttattataaattaat 34442632  T
Q  888 taccacattttccatgta-taactactatataatttccttttccatatc 935  Q
    || |||| |||| ||| | ||||||||||||||| | ||||| ||||||    
T  34442633 ta-cacaatttcaatgcattaactactatataatcttctttttcatatc 34442680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 794 - 935
Target Start/End: Original strand, 26387064 - 26387212
Alignment:
Q  794 gggtcatgctaaccggtgccccg--ggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttt-gactttattatgaattaa 886  Q
    ||||| || |||||||||||||   |||| ||||| | ||||||||||||||||    |||||||||||| ||| |||||| ||||||||||| ||||||    
T  26387064 gggtcctgttaaccggtgcccccaaggcactggttaagcataccataaaagggaattattaccataaaagaaaattgtttttgactttattataaattaa 26387163  T
Q  887 ttaccacattttccatgtat-aactactatataatttccttttccatatc 935  Q
    |||| ||| |||| ||| || |||||||||||||||||||||| ||||||    
T  26387164 ttac-acaatttcaatgcattaactactatataatttcctttttcatatc 26387212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 851 - 972
Target Start/End: Original strand, 561581 - 561708
Alignment:
Q  851 ataaaaggaaactg-ttttgactttattatgaattaattaccacattttccatgtat-aactactatataatttccttttccatatcat--accagtgcc 946  Q
    |||||||||||||| ||||||||||||||| |||||||||| ||| |||| ||| || |||||||||||||||||||||| |||||| |  |||||||||    
T  561581 ataaaaggaaactgattttgactttattataaattaattac-acaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcc 561679  T
Q  947 c---ggagaccggtaagcatttccctttt 972  Q
    |   ||  |||||| ||||||||||||||    
T  561680 ccgggggcaccggttagcatttccctttt 561708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 794 - 933
Target Start/End: Complemental strand, 4381981 - 4381835
Alignment:
Q  794 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttt-gactttattatgaattaa 886  Q
    ||||| |||||||| |||| ||  ||||| ||||| | |||||||||||| |||    ||||||||||||||||||||||| ||| ||||||| ||||||    
T  4381981 gggtcctgctaaccagtgctcccggggcactggttaagcataccataaaatggaattattaccataaaaggaaactgtttttgacattattataaattaa 4381882  T
Q  887 ttaccacattttccatgtat-aactactatataatttccttttccata 933  Q
    |||| ||| |||| ||| || |||||||||||||||||||||| ||||    
T  4381881 ttac-acaatttcaatgcattaactactatataatttcctttttcata 4381835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 794 - 933
Target Start/End: Original strand, 27856396 - 27856542
Alignment:
Q  794 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactg-ttttgactttattatgaattaa 886  Q
    ||||| ||||||||| ||||||  ||||| ||||| | |||||||||||||| |    ||||||||||||||||||| ||||||| ||||||| ||||||    
T  27856396 gggtcctgctaaccgatgcccccggggcactggttaagcataccataaaaggaaattattaccataaaaggaaactgtttttgacattattataaattaa 27856495  T
Q  887 ttaccacattttccatgta-taactactatataatttccttttccata 933  Q
    ||| |||| |||| ||| | |||||| |||||||||||||||| ||||    
T  27856496 tta-cacaatttcaatgcattaactattatataatttcctttttcata 27856542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 793 - 935
Target Start/End: Complemental strand, 22887937 - 22887788
Alignment:
Q  793 tgggtcatgctaaccggtgccccggg--cattggttgaacataccataaaaggga----ttaccataaaaggaaactg-ttttgactttattatgaatta 885  Q
    ||||||||||||| ||||||||| ||  || ||||| | ||||||||||||| ||    ||||||||||||||||||| |||| |||||||||| |||||    
T  22887937 tgggtcatgctaatcggtgcccccggagcactggttaagcataccataaaagagaattattaccataaaaggaaactgtttttaactttattataaatta 22887838  T
Q  886 attaccacattttccatgta-taactactatataatttccttttccatatc 935  Q
    |||| || | |||| ||| | |||||||||||||||||| |||| ||||||    
T  22887837 atta-cataatttcaatgcattaactactatataatttcttttttcatatc 22887788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 830 - 935
Target Start/End: Complemental strand, 31390160 - 31390050
Alignment:
Q  830 cataccataaaaggga----ttaccataaaaggaaactg-ttttgactttattatgaattaattaccacattttccatgta-taactactatataatttc 923  Q
    ||||||||||||||||    ||||||||||||||||||| ||||||||||||||| ||||||||| || | |||| ||  | ||||||||||||||||||    
T  31390160 cataccataaaagggaattattaccataaaaggaaactgtttttgactttattataaattaatta-cataatttcaatacattaactactatataatttc 31390062  T
Q  924 cttttccatatc 935  Q
    ||||| ||||||    
T  31390061 ctttttcatatc 31390050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 845 - 935
Target Start/End: Original strand, 8969464 - 8969555
Alignment:
Q  845 attaccataaaaggaaactg-ttttgactttattatgaattaattaccacattttccatgta-taactactatataatttccttttccatatc 935  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||| |||  |||| ||| | ||||||||||||||||| ||||| ||||||    
T  8969464 attaccataaaaggaaactgcttttgactttattataaattaatta-cactatttcaatgcattaactactatataattttctttttcatatc 8969555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 215 - 303
Target Start/End: Original strand, 12395021 - 12395109
Alignment:
Q  215 catgaggtatgtgattacagttttacaaagatcacaagaaccaagcatagtggttatcgaatttgcttttgtggcatcaaatggcatat 303  Q
    ||||||| |||||||||||| ||||| ||| || | ||||||||||||||| || || | |||||||||||| ||||||||||| ||||    
T  12395021 catgaggaatgtgattacagctttaccaagttcgcgagaaccaagcatagttgtaatggcatttgcttttgtagcatcaaatggtatat 12395109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 845 - 935
Target Start/End: Complemental strand, 27584867 - 27584776
Alignment:
Q  845 attaccataaaaggaaactg-ttttgactttattatgaattaattaccacattttccatg-tataactactatataatttccttttccatatc 935  Q
    |||||||||||||||||||| |||||| |||||||| |||||||||| ||| |||| ||| | ||||||||||||||||||| ||| ||||||    
T  27584867 attaccataaaaggaaactgcttttgattttattataaattaattac-acaatttcaatgctttaactactatataatttcccttttcatatc 27584776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 845 - 935
Target Start/End: Complemental strand, 38296306 - 38296215
Alignment:
Q  845 attaccataaaaggaaactgtttt-gactttattatgaattaattaccacattttccatgta-taactactatataatttccttttccatatc 935  Q
    |||||||||||| ||||||||||| ||||||||||| ||||||||| |||| |||| ||||| ||| ||||||||||||| ||||| ||||||    
T  38296306 attaccataaaaagaaactgtttttgactttattataaattaatta-cacaatttcaatgtattaattactatataattttctttttcatatc 38296215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 794 - 935
Target Start/End: Original strand, 5093540 - 5093687
Alignment:
Q  794 gggtcatgctaaccggtgcccc-gggcattggttgaacataccataaaagg----gattaccataaaaggaaactg-ttttgactttattatgaattaat 887  Q
    ||||| || ||||||||||||| ||||| | ||| ||||||||||||||||     |||| |||||||||||| || ||||||||||||||| |||||||    
T  5093540 gggtcctgttaaccggtgccccggggcactagttaaacataccataaaaggaaattattatcataaaaggaaattgcttttgactttattataaattaat 5093639  T
Q  888 taccacattttccatgta-taactactatataatttccttttccatatc 935  Q
    || |||| |||  ||| | |||||||||| |||||||||||| ||||||    
T  5093640 ta-cacaattttaatgcattaactactatttaatttcctttttcatatc 5093687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 816 - 933
Target Start/End: Complemental strand, 6580351 - 6580229
Alignment:
Q  816 gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactg-ttttgactttattatgaattaattaccacattttccatgta-taac 909  Q
    ||||| ||||| | ||||||||||||||||    ||||||||||||||||||| ||||||| ||||||| ||||||||| || | |||| ||| | ||||    
T  6580351 gggcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgacattattataaattaatta-cataatttcaatgcattaac 6580253  T
Q  910 tactatataatttccttttccata 933  Q
    ||||||||| ||||||||| ||||    
T  6580252 tactatatagtttcctttttcata 6580229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 412 - 454
Target Start/End: Original strand, 12356205 - 12356247
Alignment:
Q  412 gtgttgcttggatcacacctaactttatcttgcagatatatat 454  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  12356205 gtgttgcttggatcacacataactttatcttgcagatatatat 12356247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 802 - 934
Target Start/End: Original strand, 38590883 - 38591021
Alignment:
Q  802 ctaaccggtgccccgggc-attggttgaacataccataaaaggga----ttaccataaaaggaaactgtttt-gactttattatgaattaattaccacat 895  Q
    |||||||||||| ||||  ||||||| | ||||||||||||||||    |||||||||||| |||||||||| ||||||||||| ||||||||| ||||     
T  38590883 ctaaccggtgcctcggggtattggttaagcataccataaaagggaattattaccataaaagaaaactgtttttgactttattatcaattaatta-cacaa 38590981  T
Q  896 tttccatgta-taactactatataatttccttttccatat 934  Q
    |||  ||  | |||||||| |||||||||||||| |||||    
T  38590982 ttttaatacattaactactgtataatttcctttttcatat 38591021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 794 - 890
Target Start/End: Original strand, 35851750 - 35851854
Alignment:
Q  794 gggtcatgctaaccggtgccccg---ggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttt-gactttattatgaatta 885  Q
    ||||| ||||||||||||||||    |||||||||| | ||||||||||||| ||    ||||||||||| ||||||||||| ||||||||||| |||||    
T  35851750 gggtcctgctaaccggtgccccccgaggcattggttaagcataccataaaagagaattattaccataaaatgaaactgtttttgactttattatcaatta 35851849  T
Q  886 attac 890  Q
    |||||    
T  35851850 attac 35851854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 800 - 935
Target Start/End: Complemental strand, 43637343 - 43637202
Alignment:
Q  800 tgctaaccggtgccccgg-gcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttt-gactttattatgaattaattaccac 893  Q
    |||||||||||||||||| |||  |||| |||||||  ||||||| |    ||||||||||| |||| |||||| ||||||||||| |||||||||| ||    
T  43637343 tgctaaccggtgccccggagcacgggttaaacatactgtaaaaggaaattattaccataaaaagaaattgtttttgactttattataaattaattac-ac 43637245  T
Q  894 attttccatgtat-aactactatataatttccttttccatatc 935  Q
    | |||| ||| || |||||||||||||||||||| | ||||||    
T  43637244 aatttcaatgcattaactactatataatttccttattcatatc 43637202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 794 - 935
Target Start/End: Complemental strand, 28601152 - 28601005
Alignment:
Q  794 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactg-ttttgactttattatgaattaa 886  Q
    ||||| ||||||||||||| ||  | ||| ||||| | ||||||||||||| ||    ||||||||||| ||||||| |||| |||||||||| ||||||    
T  28601152 gggtcctgctaaccggtgctcccagtgcactggttaagcataccataaaagagaattattaccataaaaagaaactgtttttaactttattatcaattaa 28601053  T
Q  887 ttaccacattttccatgtataactactatataatttccttttccatatc 935  Q
    |||  ||| |||| ||| ||||||||| ||||||| |||||| ||||||    
T  28601052 tta-tacaatttcaatgcataactactttataattccctttttcatatc 28601005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 850 - 928
Target Start/End: Complemental strand, 32860226 - 32860147
Alignment:
Q  850 cataaaaggaaactgtttt-gactttattatgaattaattaccacattttccatgta-taactactatataatttcctttt 928  Q
    ||||||||||||||||||| ||||||||||| ||||||||| |||| |||| ||| | ||| |||||||||||||||||||    
T  32860226 cataaaaggaaactgtttttgactttattataaattaatta-cacaatttcaatgcattaaatactatataatttcctttt 32860147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 847 - 928
Target Start/End: Original strand, 26891722 - 26891804
Alignment:
Q  847 taccataaaaggaaactgtttt-gactttattatgaattaattaccacattttccatgta-taactactatataatttcctttt 928  Q
    ||||||||||||||||| |||| ||||||||||| ||||||||| |||| |||| ||| | |||||| ||||||||||||||||    
T  26891722 taccataaaaggaaactatttttgactttattataaattaatta-cacaatttcaatgcattaactaatatataatttcctttt 26891804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 795 - 890
Target Start/End: Original strand, 4022480 - 4022582
Alignment:
Q  795 ggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaagg----gattaccataaaaggaaactgttt-tgactttattatgaattaat 887  Q
    |||| ||||||||||||||||  || || ||||| |||||| |||||||||     |||| |||||||||||||||||| |||||||||||| |||||||    
T  4022480 ggtcctgctaaccggtgcccccgggacactggttaaacatatcataaaaggaaattattatcataaaaggaaactgtttctgactttattataaattaat 4022579  T
Q  888 tac 890  Q
    |||    
T  4022580 tac 4022582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 796 - 890
Target Start/End: Complemental strand, 1859346 - 1859245
Alignment:
Q  796 gtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttt-gactttattatgaattaatt 888  Q
    ||||||||||||||||  ||  ||||| ||||| | ||||||||||||| ||    |||||||||||| |||||||||| ||||||||||| ||||||||    
T  1859346 gtcatgctaaccggtgttcctagggcactggttaagcataccataaaagagaattattaccataaaagaaaactgtttttgactttattataaattaatt 1859247  T
Q  889 ac 890  Q
    ||    
T  1859246 ac 1859245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 794 - 935
Target Start/End: Complemental strand, 22567788 - 22567640
Alignment:
Q  794 gggtcatgctaaccggtgccccggg--cattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttt-gactttattatgaattaa 886  Q
    ||||| |||||||||||||||| ||  ||  |||| | ||||||||||||| ||    |||||||||||||||| | |||| ||||||||||| ||||||    
T  22567788 gggtcctgctaaccggtgcccctggagcacgggttaagcataccataaaagagaattattaccataaaaggaaattatttttgactttattataaattaa 22567689  T
Q  887 ttaccacattttccatgtat-aactactatataatttccttttccatatc 935  Q
    |||| ||| |||| ||  || ||||||||||||||||| |||| ||||||    
T  22567688 ttac-acaatttcaatacattaactactatataatttcttttttcatatc 22567640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 786 - 935
Target Start/End: Complemental strand, 2898265 - 2898109
Alignment:
Q  786 tttaatttgggtcatgctaaccggtgcc-ccggg-cattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttt-gactttatta 878  Q
    |||||||  |||| |||||||||||||| ||||| || || || ||||||||||||||| ||    |||  ||| ||| |||||||||| ||||||||||    
T  2898265 tttaattatggtcctgctaaccggtgcctccgggacactgattaaacataccataaaagagaattattatgatagaagaaaactgtttttgactttatta 2898166  T
Q  879 tgaattaattaccacattttccatgtat-aactactatataatttccttttccatatc 935  Q
    | |||||||||| ||| |||| ||| || |||||||||||||||| ||||| ||||||    
T  2898165 taaattaattac-acaatttcaatgcattaactactatataattttctttttcatatc 2898109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 830 - 935
Target Start/End: Original strand, 11021260 - 11021370
Alignment:
Q  830 cataccataaaaggga----ttaccataaaaggaaactgtttt-gactttattatgaattaattaccacattttccatgta-taactactatataatttc 923  Q
    ||||||||||||||||    |||||| ||||| |||||||||| |||||||||||  |||||||| |||| |||| ||| | ||||||| ||||||||||    
T  11021260 cataccataaaagggaattattaccacaaaagaaaactgtttttgactttattatatattaatta-cacaatttcaatgcattaactaccatataatttc 11021358  T
Q  924 cttttccatatc 935  Q
     |||| ||||||    
T  11021359 ttttttcatatc 11021370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 845 - 890
Target Start/End: Original strand, 13574086 - 13574132
Alignment:
Q  845 attaccataaaaggaaactgtttt-gactttattatgaattaattac 890  Q
    |||||||||||| ||||||||||| ||||||||||| ||||||||||    
T  13574086 attaccataaaaagaaactgtttttgactttattataaattaattac 13574132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 845 - 928
Target Start/End: Complemental strand, 39531952 - 39531869
Alignment:
Q  845 attaccataaaaggaaactg-ttttgactttattatgaattaattaccacattttccatgtat-aactactatataatttcctttt 928  Q
    ||||||||||||| |||||| |||||||| | |||| |||||||||| ||| |||| ||| || ||||||||||||||||||||||    
T  39531952 attaccataaaagaaaactggttttgactct-ttataaattaattac-acaatttcaatgcattaactactatataatttcctttt 39531869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 8e-27; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 794 - 933
Target Start/End: Complemental strand, 39074604 - 39074459
Alignment:
Q  794 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgttttgactttattatgaattaat 887  Q
    ||||| ||||||||||||||||  ||||| ||||| | ||||||||||||||||    |||||||||||||||||||||||||| ||||||| |||||||    
T  39074604 gggtcctgctaaccggtgcccctggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgttttgacattattataaattaat 39074505  T
Q  888 taccacattttccatgta-taactactatataatttccttttccata 933  Q
    || |||| |||| ||| | ||||||||||||||||||||||| ||||    
T  39074504 ta-cacaatttcaatgcattaactactatataatttcctttttcata 39074459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 806 - 935
Target Start/End: Complemental strand, 2505523 - 2505387
Alignment:
Q  806 ccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttt-gactttattatgaattaattaccacatttt 898  Q
    ||||||||||  ||||| ||||| ||||||||||||||||||    |||||||||||||||||| |||| |||||||||||||||||||||| ||| |||    
T  2505523 ccggtgcccccagggcactggttaaacataccataaaagggaattattaccataaaaggaaactatttttgactttattatgaattaattac-acaattt 2505425  T
Q  899 ccatgta-taactactatataatttccttttccatatc 935  Q
    | ||| | ||||||||||||||||||||||| ||||||    
T  2505424 caatgcactaactactatataatttcctttttcatatc 2505387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 793 - 972
Target Start/End: Complemental strand, 46352821 - 46352630
Alignment:
Q  793 tgggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgttt-tgactttattatgaatta 885  Q
    |||||| |||||||||||||| |  |||||  |||| | ||||||||||||||||    |||||||||||||||||||||| |||||||||||| |||||    
T  46352821 tgggtcctgctaaccggtgcctccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgtttctgactttattatcaatta 46352722  T
Q  886 attaccacattttccatgta-taactactatataatttccttttccatatcat--accagtgccc---ggagaccggtaagcatttccctttt 972  Q
    |||| |||| |||| ||| | |||||||| |||||||||||||| |||||| |  ||||||||||   ||  |||||| ||||||||||||||    
T  46352721 atta-cacaatttcaatgcattaactactgtataatttcctttttcatatccttaaccagtgccccgggggcaccggttagcatttccctttt 46352630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 793 - 935
Target Start/End: Complemental strand, 272407 - 272258
Alignment:
Q  793 tgggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttt-gactttattatgaatta 885  Q
    |||||| ||||||||||||||||  |||||  | || | ||||||||||||||||    |||||||||||||||||| |||| ||||||||||| |||||    
T  272407 tgggtcctgctaaccggtgcccccggggcaccgattaagcataccataaaagggaattattaccataaaaggaaactatttttgactttattataaatta 272308  T
Q  886 attaccacattttccatgtat-aactactatataatttccttttccatatc 935  Q
    ||||| ||| |||| ||| || |||||||||||||||||||||| ||||||    
T  272307 attac-acaatttcaatgcattaactactatataatttcctttttcatatc 272258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 801 - 935
Target Start/End: Complemental strand, 858768 - 858627
Alignment:
Q  801 gctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttt-gactttattatgaattaattaccac 893  Q
    |||||||||||||||  |||||  |||| | |||||||||||||| |    ||||||||||||||||||||||| ||||||||||| |||||||||| ||    
T  858768 gctaaccggtgcccccggggcacgggttaagcataccataaaaggaaattattaccataaaaggaaactgtttttgactttattatcaattaattac-ac 858670  T
Q  894 attttccatgtat-aactactatataatttccttttccatatc 935  Q
    | |||| ||| || |||||||||||||||||||||| ||||||    
T  858669 aatttcaatgcattaactactatataatttcctttttcatatc 858627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 791 - 928
Target Start/End: Original strand, 10617281 - 10617425
Alignment:
Q  791 tttgggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttt-gactttattatgaat 883  Q
    |||||||| ||||||||||||||||  |||||  |||| | ||||||||||||||||    |||||||||||||||| |||||| ||||||||||| |||    
T  10617281 tttgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaattgtttttgactttattataaat 10617380  T
Q  884 taattaccacattttccatgtat-aactactatataatttcctttt 928  Q
    ||||||| ||| |||  ||| || ||||||||||||||||||||||    
T  10617381 taattac-acaattttaatgcattaactactatataatttcctttt 10617425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 794 - 935
Target Start/End: Complemental strand, 48725457 - 48725309
Alignment:
Q  794 gggtcatgctaaccggtg--ccccgggcattggttgaacataccataaaaggga----ttaccataaaaggaaactg-ttttgactttattatgaattaa 886  Q
    ||||| |||||||| |||  ||| ||||| ||||| | ||||||||||||||||    ||||||||||||||||||| ||||||||||||||| ||||||    
T  48725457 gggtcctgctaacccgtggtcccggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatcaattaa 48725358  T
Q  887 ttaccacattttccatgta-taactactatataatttccttttccatatc 935  Q
    ||| |||| |||| ||| | ||| ||||||||||||||||||| ||||||    
T  48725357 tta-cacaatttcaatgcattaattactatataatttcctttttcatatc 48725309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 845 - 935
Target Start/End: Original strand, 41553997 - 41554088
Alignment:
Q  845 attaccataaaaggaaactgtttt-gactttattatgaattaattaccacattttccatgtat-aactactatataatttccttttccatatc 935  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||| ||| |||| ||| || |||||||||||||||||||||| ||||||    
T  41553997 attaccataaaaggaaactgtttttgactttattataaattaattac-acaatttcaatgcattaactactatataatttcctttttcatatc 41554088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 795 - 890
Target Start/End: Original strand, 49529269 - 49529369
Alignment:
Q  795 ggtcatgctaaccggtgccccgggcattggttgaacataccataaaagg----gattaccataaaaggaaactg-ttttgactttattatgaattaatta 889  Q
    |||| |||||||||||||||| |||| ||||| ||||||||||||||||     ||||||||||||||||| || ||||||||||||||| |||||||||    
T  49529269 ggtcttgctaaccggtgcccccggcactggttaaacataccataaaaggaaattattaccataaaaggaaaatgtttttgactttattataaattaatta 49529368  T
Q  890 c 890  Q
    |    
T  49529369 c 49529369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 788 - 935
Target Start/End: Complemental strand, 49893523 - 49893369
Alignment:
Q  788 taatttgggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactg-ttttgactttattatg 880  Q
    |||| ||||||  |||||||||||||||  ||||| || || | ||||||||||||||||    ||||||||||||||||||| |||||||||||||||     
T  49893523 taatatgggtccggctaaccggtgcccccggggcactgattaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattata 49893424  T
Q  881 aattaattaccacattttccatgta-taactactatataatttccttttccatatc 935  Q
     |||||||| |||| |||| ||| | |||||| |||||||||||||||| ||||||    
T  49893423 gattaatta-cacaatttcaatgcattaactattatataatttcctttttcatatc 49893369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 794 - 933
Target Start/End: Complemental strand, 52520867 - 52520721
Alignment:
Q  794 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttt-gactttattatgaattaa 886  Q
    ||||| ||||||||||||||||  ||||| ||||| | ||||||||||||  ||    ||||||||||||||||||||||| ||| ||||||| ||||||    
T  52520867 gggtcctgctaaccggtgcccccggggcactggttaagcataccataaaatagaattattaccataaaaggaaactgtttttgacattattataaattaa 52520768  T
Q  887 ttaccacattttccatgtat-aactactatataatttccttttccata 933  Q
    |||| ||| |||| ||| || |||||||||||||||||||||| ||||    
T  52520767 ttac-acaatttcaatgcattaactactatataatttcctttttcata 52520721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 791 - 928
Target Start/End: Complemental strand, 7468598 - 7468456
Alignment:
Q  791 tttgggtcatgctaaccggtgccccggg-cattggttgaacataccataaaagggattac---cataaaaggaaactg-ttttgactttattatgaatta 885  Q
    |||||||| ||||||||||||| ||||| || || || | |||||||||||||||||||    |||||||| |||||| ||||||||||||||| |||||    
T  7468598 tttgggtcctgctaaccggtgctccggggcactgattaagcataccataaaagggattattatcataaaagaaaactgcttttgactttattataaatta 7468499  T
Q  886 attaccacattttccatgtat-aactactatataatttcctttt 928  Q
    ||||  ||| |||| ||| || ||||||||||||||||||||||    
T  7468498 attat-acaatttcaatgcattaactactatataatttcctttt 7468456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 794 - 968
Target Start/End: Complemental strand, 43787057 - 43786871
Alignment:
Q  794 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttt-gactttattatgaattaa 886  Q
    ||||| ||||||||||||||||  ||||| ||||| | ||||||||||||  ||    ||||||||||||||||||||||| ||  ||||||| ||||||    
T  43787057 gggtcctgctaaccggtgcccccggggcactggttaagcataccataaaatagaattattaccataaaaggaaactgtttttgatattattataaattaa 43786958  T
Q  887 ttaccacattttccatgtat-aactactatataatttccttttccatatcat--accagtg-cccggag--accggtaagcatttccc 968  Q
    |||| ||| |||| ||| || |||||||||||||||||||||| |||| |||  ||||||| |||||||  |||||| ||||||||||    
T  43786957 ttac-acaatttcaatgcattaactactatataatttcctttttcataccattaaccagtgccccggaggcaccggttagcatttccc 43786871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 845 - 935
Target Start/End: Original strand, 50395620 - 50395710
Alignment:
Q  845 attaccataaaaggaaactgttttgactttattatgaattaattaccacattttccatgta-taactactatataatttccttttccatatc 935  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||| |||| |||| ||| | |||||||| |||||||| ||||| ||||||    
T  50395620 attaccataaaaggaaattgttttgactttattatcaattaatta-cacaatttctatgcattaactactgtataattttctttttcatatc 50395710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 816 - 935
Target Start/End: Complemental strand, 41304165 - 41304043
Alignment:
Q  816 gggcattggttgaacataccataaaagg----gattaccataaaaggaaactg-ttttgactttattatgaattaattaccacattttccatgta-taac 909  Q
    ||||||||||| | ||||||||||||||     |||||||||||||||||||| ||||||||||||||| ||||||||   ||| |||| ||| | |||     
T  41304165 gggcattggttaagcataccataaaaggaaattattaccataaaaggaaactgtttttgactttattatcaattaatt---acaatttcaatgcattaat 41304069  T
Q  910 tactatataatttccttttccatatc 935  Q
    ||||||||||||||||||| ||||||    
T  41304068 tactatataatttcctttttcatatc 41304043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 828 - 935
Target Start/End: Complemental strand, 2119579 - 2119469
Alignment:
Q  828 aacataccataaaagggattac--cataaaaggaaactgtttt-gactttattatgaattaattaccacattttccatgtat-aactactatataatttc 923  Q
    |||||||||||||||| ||||   |||||||||||| |||||| ||||||||||| ||||||||||  || |||| ||| || |||||||||||||||||    
T  2119579 aacataccataaaaggaattattacataaaaggaaattgtttttgactttattataaattaattact-caatttcaatgcattaactactatataatttc 2119481  T
Q  924 cttttccatatc 935  Q
    ||||| ||||||    
T  2119480 ctttttcatatc 2119469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 793 - 890
Target Start/End: Complemental strand, 6842806 - 6842702
Alignment:
Q  793 tgggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactg-ttttgactttattatgaatta 885  Q
    |||||| ||||||||| ||||||  ||||| ||||| | ||||||||||| ||||    ||||||||||||||||||| ||||||||||||||| |||||    
T  6842806 tgggtcctgctaaccgctgcccccggggcactggttaagcataccataaatgggaattattaccataaaaggaaactgtttttgactttattataaatta 6842707  T
Q  886 attac 890  Q
    |||||    
T  6842706 attac 6842702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 845 - 935
Target Start/End: Complemental strand, 13160026 - 13159935
Alignment:
Q  845 attaccataaaaggaaactgtttt-gactttattatgaattaattaccacattttccatgtat-aactactatataatttccttttccatatc 935  Q
    |||||| ||| || |||||||||| ||||||||||| |||||||||| ||| |||| |||||| |||||||||||||||||||||| ||||||    
T  13160026 attaccgtaatagaaaactgtttttgactttattatcaattaattac-acaatttcaatgtattaactactatataatttcctttttcatatc 13159935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 315 - 382
Target Start/End: Complemental strand, 14853464 - 14853396
Alignment:
Q  315 ttgcggtggttttttgggacaccttgtgctaaccatatca-ttttgcaatgttaatataatccattttt 382  Q
    |||||||||||| |||| ||||||| |||| || |||||| ||||||||||||||||||||||||||||    
T  14853464 ttgcggtggtttcttggcacaccttttgctgacgatatcacttttgcaatgttaatataatccattttt 14853396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 845 - 935
Target Start/End: Complemental strand, 22249015 - 22248924
Alignment:
Q  845 attaccataaaaggaaactgtttt-gactttattatgaattaattaccacattttccat-gtataactactatataatttccttttccatatc 935  Q
    ||||||||||||| |||||||||| ||||||||||| ||||||||| |||| |||| ||   |||||||||||||||||||||||| ||||||    
T  22249015 attaccataaaagaaaactgtttttgactttattatcaattaatta-cacaatttcaatacaataactactatataatttcctttttcatatc 22248924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 794 - 928
Target Start/End: Complemental strand, 4168369 - 4168228
Alignment:
Q  794 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttt-gactttattatgaattaa 886  Q
    ||||| ||||||||||||||||  ||| |  |||| | ||||||||||||| ||    |||||||||||| |||||||||| ||||||||||| ||||||    
T  4168369 gggtcctgctaaccggtgcccccggggtacgggttaagcataccataaaagagaattattaccataaaagaaaactgtttttgactttattataaattaa 4168270  T
Q  887 ttaccacattttccatgtat-aactactatataatttcctttt 928  Q
    |||| ||| |||| ||  || ||||||||||||||||||||||    
T  4168269 ttac-acaatttcaatacattaactactatataatttcctttt 4168228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 794 - 890
Target Start/End: Original strand, 11308211 - 11308313
Alignment:
Q  794 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaagg---gattaccataaaaggaaact-gttttgactttattatgaattaat 887  Q
    ||||| |||||| |||||||||  ||||||||||| | ||||||||||||||    |||||||||||||||||||  |||||| |||||||| |||||||    
T  11308211 gggtcctgctaatcggtgcccctggggcattggttaagcataccataaaaggaattattaccataaaaggaaactatttttgattttattatcaattaat 11308310  T
Q  888 tac 890  Q
    |||    
T  11308311 tac 11308313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 794 - 935
Target Start/End: Original strand, 40362580 - 40362728
Alignment:
Q  794 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttt-gactttattatgaattaa 886  Q
    ||||| |||||| |||| ||||  ||||| ||||| | ||||||||||||| ||    |||||||||||| |||||||||| ||||||||||| ||||||    
T  40362580 gggtcctgctaatcggtacccccggggcactggttaagcataccataaaagagaattattaccataaaagaaaactgtttttgactttattatcaattaa 40362679  T
Q  887 ttaccacattttccatgta-taactactatataatttccttttccatatc 935  Q
    ||| |||| |||  ||| | |||||||||||||||||| |||| ||||||    
T  40362680 tta-cacaattttaatgcattaactactatataatttcttttttcatatc 40362728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 800 - 935
Target Start/End: Complemental strand, 42548274 - 42548133
Alignment:
Q  800 tgctaaccggtgccccgg-gcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttt-gactttattatgaattaattaccac 893  Q
    |||||||||||| ||||| ||| ||||| | ||||||||||||||||    ||||||||||| |||| | |||| ||||||||||| |||||||||| |     
T  42548274 tgctaaccggtgtcccggagcactggttaagcataccataaaagggaattattaccataaaatgaaattatttttgactttattataaattaattac-at 42548176  T
Q  894 attttccatgtat-aactactatataatttccttttccatatc 935  Q
    | |||| ||| || ||||||||||||||||| |||| ||||||    
T  42548175 aatttcaatgcattaactactatataatttcttttttcatatc 42548133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 845 - 928
Target Start/End: Complemental strand, 21010122 - 21010042
Alignment:
Q  845 attaccataaaaggaaactgttttgactttattatgaattaattaccacattttccatgtataactactatataatttcctttt 928  Q
    |||||||||||| |||||| |||||||||| |||| |||||||||  ||| |||| |||| |||||||||||||||||||||||    
T  21010122 attaccataaaaagaaacttttttgacttt-ttataaattaattat-acaatttcaatgt-taactactatataatttcctttt 21010042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 845 - 933
Target Start/End: Complemental strand, 20924121 - 20924032
Alignment:
Q  845 attaccataaaaggaaactgtttt-gactttattatgaattaattaccacattttccatgtat-aactactatataatttccttttccata 933  Q
    |||||| ||||||||||||||||| ||  ||||||| |||||||||| ||| |||| ||| || |||||||||||||||||||||| ||||    
T  20924121 attaccttaaaaggaaactgtttttgatattattataaattaattac-acaatttcaatgaattaactactatataatttcctttttcata 20924032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 845 - 933
Target Start/End: Original strand, 53489881 - 53489970
Alignment:
Q  845 attaccataaaaggaaactgtttt-gactttattatgaattaattaccacattttccatgtat-aactactatataatttccttttccata 933  Q
    |||| ||||||||||||||||||| ||| ||||||| |||||||||| ||| |||  ||| || |||||||||||||||||||||| ||||    
T  53489881 attatcataaaaggaaactgtttttgacattattataaattaattac-acaattttaatgcattaactactatataatttcctttttcata 53489970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 845 - 928
Target Start/End: Complemental strand, 24488495 - 24488411
Alignment:
Q  845 attaccataaaaggaaactg-ttttgactttattatgaattaattaccacattttccatgta-taactactatataatttcctttt 928  Q
    |||||||||||| ||||||| |||||| |||||||| ||||||||| |||  |||||||| | |||||| ||||||||||||||||    
T  24488495 attaccataaaaagaaactgtttttgattttattatcaattaatta-cactatttccatgcattaactattatataatttcctttt 24488411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 831 - 935
Target Start/End: Complemental strand, 28139456 - 28139347
Alignment:
Q  831 ataccataaaaggga----ttaccataaaaggaaactg-ttttgactttattatgaattaattaccacattttccatgta-taactactatataatttcc 924  Q
    |||||||||||||||    ||||||||||||||| ||| ||||||||||||||| |||||||||  ||| |||| ||| | |||||||||| |||||||     
T  28139456 ataccataaaagggaattattaccataaaaggaatctgcttttgactttattataaattaatta-tacaatttcaatgcattaactactatttaatttct 28139358  T
Q  925 ttttccatatc 935  Q
    |||| ||||||    
T  28139357 tttttcatatc 28139347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 845 - 935
Target Start/End: Original strand, 42964306 - 42964397
Alignment:
Q  845 attaccataaaaggaaactgtttt-gactttattatgaattaattaccacattttccatgta-taactactatataatttccttttccatatc 935  Q
    ||||| ||||||| |||||||||| ||||||||||| ||||||||| |||| |||| ||| | ||||||||||| |||||| |||| ||||||    
T  42964306 attactataaaagaaaactgtttttgactttattataaattaatta-cacaatttcaatgcattaactactataaaatttcatttttcatatc 42964397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 845 - 921
Target Start/End: Complemental strand, 33141014 - 33140937
Alignment:
Q  845 attaccataaaaggaaactg-ttttgactttattatgaattaattaccacattttccatgta-taactactatataatt 921  Q
    ||||||||||||| |||||| ||||||||||||||| |||||||||  ||| |||| ||| | ||||||||||||||||    
T  33141014 attaccataaaagaaaactgcttttgactttattataaattaatta-tacaatttcaatgcattaactactatataatt 33140937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 793 - 890
Target Start/End: Complemental strand, 52552659 - 52552557
Alignment:
Q  793 tgggtcatgctaaccggtg-ccccgggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttt-gactttattatgaattaa 886  Q
    |||||||||||||||| || |||||| || ||||| || |||||||||||| ||    |||||||||||| | |||||||| ||||||||||| ||||||    
T  52552659 tgggtcatgctaaccgatgtccccggacactggttaaatataccataaaagagaattattaccataaaag-atactgtttttgactttattataaattaa 52552561  T
Q  887 ttac 890  Q
    ||||    
T  52552560 ttac 52552557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 62; Significance: 3e-26; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 794 - 970
Target Start/End: Original strand, 27988500 - 27988687
Alignment:
Q  794 gggtcatgctaaccggtgcccc-gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactg-ttttgactttattatgaattaat 887  Q
    ||||| |||||||||||||||| ||||| ||||| | ||||||||||||||||    ||||||||||||||||||| ||||||||||||||| |||||||    
T  27988500 gggtcctgctaaccggtgcccccgggcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattataaattaat 27988599  T
Q  888 taccacattttccatgta-taactactatataatttccttttccatatcat--accagtg-cccggag--accggtaagcatttccctt 970  Q
    || |||| |||| ||| | |||||| |||||||||||||||| |||||| |  ||||||| |||||||  |||||| ||||||||||||    
T  27988600 ta-cacaatttcaatgcattaactattatataatttcctttttcatatccttaaccagtgccccggaggcaccggttagcatttccctt 27988687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 794 - 970
Target Start/End: Original strand, 28045802 - 28045989
Alignment:
Q  794 gggtcatgctaaccggtgcccc-gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactg-ttttgactttattatgaattaat 887  Q
    ||||| |||||||||||||||| ||||| ||||| | ||||||||||||||||    ||||||||||||||||||| ||||||||||||||| |||||||    
T  28045802 gggtcctgctaaccggtgcccccgggcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattataaattaat 28045901  T
Q  888 taccacattttccatgta-taactactatataatttccttttccatatcat--accagtg-cccggag--accggtaagcatttccctt 970  Q
    || |||| |||| ||| | |||||| |||||||||||||||| |||||| |  ||||||| |||||||  |||||| ||||||||||||    
T  28045902 ta-cacaatttcaatgcattaactattatataatttcctttttcatatccttaaccagtgccccggaggcaccggttagcatttccctt 28045989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 791 - 935
Target Start/End: Complemental strand, 34228871 - 34228720
Alignment:
Q  791 tttgggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactg-ttttgactttattatgaat 883  Q
    |||||||| ||||||||||||||||  ||||| ||||| | ||||||||||||||||    ||||||||||||||||||| ||||||||||||||| |||    
T  34228871 tttgggtcctgctaaccggtgcccccggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatcaat 34228772  T
Q  884 taattaccacattttccatgta-taactactatataatttccttttccatatc 935  Q
    |||||| |||| |||| ||| | ||| ||||||||||||||||||| ||||||    
T  34228771 taatta-cacaatttcaatgcattaattactatataatttcctttttcatatc 34228720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 793 - 935
Target Start/End: Original strand, 16888543 - 16888692
Alignment:
Q  793 tgggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttt-gactttattatgaatta 885  Q
    |||||| ||||||||||||||||  ||||||||||| | ||||||| ||||| ||    ||||||||||||||||||||||| ||||||||||| |||||    
T  16888543 tgggtcctgctaaccggtgcccccggggcattggttaagcataccacaaaagagaattattaccataaaaggaaactgtttttgactttattataaatta 16888642  T
Q  886 attaccacattttccatgtat-aactactatataatttccttttccatatc 935  Q
    ||||| ||| |||| ||| || |||||||||||||||||||||| ||||||    
T  16888643 attac-acaatttcaatgcattaactactatataatttcctttttcatatc 16888692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 794 - 971
Target Start/End: Complemental strand, 168652 - 168463
Alignment:
Q  794 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttt-gactttattatgaattaa 886  Q
    ||||| ||||||||||||||||  ||||||||||| | |||||||||||| |||    ||||||||||||||||||||||| ||| ||||||| ||||||    
T  168652 gggtcctgctaaccggtgcccccggggcattggttaagcataccataaaatggaattattaccataaaaggaaactgtttttgacattattataaattaa 168553  T
Q  887 ttaccacattttccatgtat-aactactatataatttccttttccatatcat--accagtg-cccggag--accggtaagcatttcccttt 971  Q
    |||| ||| |||| ||| || |||||||||||||||||||||| |||| | |  ||||||| |||||||  |||||| |||||||||||||    
T  168552 ttac-acaatttcaatgcattaactactatataatttcctttttcatacccttaaccagtgccccggaggcaccggttagcatttcccttt 168463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 800 - 935
Target Start/End: Original strand, 16890486 - 16890628
Alignment:
Q  800 tgctaaccggtgccccgg--gcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttt-gactttattatgaattaattacca 892  Q
    ||||||||||||||||||  |||  |||| | |||||||||||| |||    ||||||||||||||||||||||| ||||||||||| |||||||||| |    
T  16890486 tgctaaccggtgccccggaggcaccggttaagcataccataaaaaggaattattaccataaaaggaaactgtttttgactttattatcaattaattac-a 16890584  T
Q  893 cattttccatgtat-aactactatataatttccttttccatatc 935  Q
    || |||| ||| || |||||||||||||||||||||| ||||||    
T  16890585 caatttcaatgcattaactactatataatttcctttttcatatc 16890628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 792 - 935
Target Start/End: Complemental strand, 43119404 - 43119255
Alignment:
Q  792 ttgggtcatgctaaccggtgccccgggc-attggttgaacataccataaaagggatt----accataaaaggaaactgtttt-gactttattatgaatta 885  Q
    ||||||| |||||||||||||||||||| ||||||| | ||||||||||||| || |    |||||||||| |||||||||| ||||||||||| |||||    
T  43119404 ttgggtcctgctaaccggtgccccgggccattggttaagcataccataaaagagaattatcaccataaaagaaaactgtttttgactttattataaatta 43119305  T
Q  886 attaccacattttccatgtat-aactactatataatttccttttccatatc 935  Q
    ||||  ||| |||| ||| || |||||||||||||||| ||||| ||||||    
T  43119304 attat-acaatttcaatgcattaactactatataattttctttttcatatc 43119255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 795 - 933
Target Start/End: Original strand, 30675574 - 30675718
Alignment:
Q  795 ggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaagggatta---ccataaaaggaaactg-ttttgactttattatgaattaatt 888  Q
    |||| |||||||||||| |||  ||||| ||||| | |||||||||||||| ||||   |||||||||||||||| ||||||| ||||||| ||||||||    
T  30675574 ggtcctgctaaccggtgtccccggggcactggttaagcataccataaaaggaattattaccataaaaggaaactgtttttgacattattataaattaatt 30675673  T
Q  889 accacattttccatgta-taactactatataatttccttttccata 933  Q
    | |||| |||| ||| | ||||||||||||||||||||||| ||||    
T  30675674 a-cacaatttcaatgcattaactactatataatttcctttttcata 30675718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 845 - 935
Target Start/End: Original strand, 33357186 - 33357277
Alignment:
Q  845 attaccataaaaggaaactgtttt-gactttattatgaattaattaccacattttccatgtat-aactactatataatttccttttccatatc 935  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||| ||| |||| ||| || |||||||||||||||||||||| ||||||    
T  33357186 attaccataaaaggaaactgtttttgactttattataaattaattac-acaatttcaatgcattaactactatataatttcctttttcatatc 33357277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 845 - 935
Target Start/End: Complemental strand, 36730573 - 36730482
Alignment:
Q  845 attaccataaaaggaaactgtttt-gactttattatgaattaattaccacattttccatgtat-aactactatataatttccttttccatatc 935  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||| ||| |||| ||| || |||||||||||||||||||||| ||||||    
T  36730573 attaccataaaaggaaactgtttttgactttattataaattaattac-acaatttcaatgcattaactactatataatttcctttttcatatc 36730482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 822 - 935
Target Start/End: Original strand, 29444170 - 29444288
Alignment:
Q  822 tggttgaacataccataaaaggga----ttaccataaaaggaaactgtttt-gactttattatgaattaattaccacattttccatgtat-aactactat 915  Q
    ||||| ||||||||||||||||||    |||||||||||| |||||||||| ||||||||||| |||||||||| ||| |||| |||  | |||||||||    
T  29444170 tggttaaacataccataaaagggaattattaccataaaagaaaactgtttttgactttattataaattaattac-acaatttcaatgcgttaactactat 29444268  T
Q  916 ataatttccttttccatatc 935  Q
    ||||||||||||| ||||||    
T  29444269 ataatttcctttttcatatc 29444288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 800 - 890
Target Start/End: Complemental strand, 39407020 - 39406925
Alignment:
Q  800 tgctaaccggtgccccgggcattggttgaacataccataaaaggg----attaccataaaaggaaactg-ttttgactttattatgaattaattac 890  Q
    ||||||||||||||| ||||| | ||| |||||||||||||||||    |||| ||||||||||||||| ||||||||||||||| ||||||||||    
T  39407020 tgctaaccggtgcccggggcactagttaaacataccataaaagggaattattatcataaaaggaaactgtttttgactttattataaattaattac 39406925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 792 - 890
Target Start/End: Original strand, 16394059 - 16394164
Alignment:
Q  792 ttgggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttt-gactttattatgaatt 884  Q
    ||||||| ||||||||||||||||  ||||||||||| | ||||||||||||| ||    ||| ||||||||||||||||||| ||||||||||| ||||    
T  16394059 ttgggtcctgctaaccggtgcccccggggcattggttaagcataccataaaagagaattattagcataaaaggaaactgtttttgactttattatcaatt 16394158  T
Q  885 aattac 890  Q
    ||||||    
T  16394159 aattac 16394164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 794 - 925
Target Start/End: Original strand, 4537744 - 4537882
Alignment:
Q  794 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactg-ttttgactttattatgaattaa 886  Q
    ||||| |||||||||||||| |  |||||  |||| | ||||||||||||||||    ||||||||||||||||||| ||||||||||||||| ||||||    
T  4537744 gggtcctgctaaccggtgcctctggggcacaggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatcaattaa 4537843  T
Q  887 ttaccacattttccatgta-taactactatataatttcct 925  Q
    ||| || | |||| ||| | ||||||||||||||||||||    
T  4537844 tta-cataatttcaatgcattaactactatataatttcct 4537882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 801 - 935
Target Start/End: Original strand, 2805267 - 2805408
Alignment:
Q  801 gctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactg-ttttgactttattatgaattaattaccac 893  Q
    ||||||||||||| |  ||||| ||||| | ||||||||||||||||    ||||||||||||||||||| |||||||||||||||   |||||||| ||    
T  2805267 gctaaccggtgcctccggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgcttttgactttattataggttaattac-ac 2805365  T
Q  894 attttccatgtat-aactactatataatttccttttccatatc 935  Q
    | |||| ||| || ||||| |||||||||||||||| ||||||    
T  2805366 aatttcaatgcattaactattatataatttcctttttcatatc 2805408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 793 - 935
Target Start/End: Original strand, 20831552 - 20831701
Alignment:
Q  793 tgggtcatgctaaccggtgccccggg--cattggttgaacataccataaaaggga----ttaccataaaaggaaactg-ttttgactttattatgaatta 885  Q
    |||||| |||||||||||| ||||||  || || || | ||||||||||||| ||    ||||||||||||||||||| ||||||||||||||| |||||    
T  20831552 tgggtcctgctaaccggtgtcccgggagcactgattaagcataccataaaagagaattattaccataaaaggaaactgcttttgactttattataaatta 20831651  T
Q  886 attaccacattttccatgta-taactactatataatttccttttccatatc 935  Q
    ||||  ||  |||| ||| | ||||||||||||||||||||||| ||||||    
T  20831652 atta-tactatttcaatgcattaactactatataatttcctttttcatatc 20831701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 845 - 970
Target Start/End: Complemental strand, 4648323 - 4648193
Alignment:
Q  845 attaccataaaaggaaactgtttt-gactttattatgaattaattaccacattttccatgtat-aactactatataatttccttttccatatcat--acc 940  Q
    |||||||| ||| ||||||||||| ||| ||||||| |||||||||| ||| |||| |||||| |||||||||||||||||||||| |||||| |  | |    
T  4648323 attaccatcaaaagaaactgtttttgacattattataaattaattac-acaatttcaatgtattaactactatataatttcctttttcatatccttaatc 4648225  T
Q  941 agtgccc--ggagaccggtaagcatttccctt 970  Q
    |||||||  ||| |||||| ||||||||||||    
T  4648224 agtgccccgggacaccggttagcatttccctt 4648193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 794 - 935
Target Start/End: Complemental strand, 11112825 - 11112677
Alignment:
Q  794 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttt-gactttattatgaattaa 886  Q
    ||||| |||||||| |||||||  |||||  |||| | ||||||||||||| ||    ||| |||||||| |||||||||| ||||||||||| ||||||    
T  11112825 gggtcctgctaaccagtgcccccagggcacaggttaagcataccataaaagtgaattattatcataaaagaaaactgtttttgactttattataaattaa 11112726  T
Q  887 ttaccacattttccatgtat-aactactatataatttccttttccatatc 935  Q
    |||| ||| |||| ||| || |||||||||||||||||||||| ||||||    
T  11112725 ttac-acaatttcaatgcattaactactatataatttcctttttcatatc 11112677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 794 - 928
Target Start/End: Complemental strand, 13643197 - 13643057
Alignment:
Q  794 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgttttgactttattatgaattaat 887  Q
    ||||| ||||||||||||| ||  ||||| ||||| | ||||||||||||| ||    |||||||||||||||  | ||||||||||||||| |||||||    
T  13643197 gggtcctgctaaccggtgctcctagggcactggttaagcataccataaaagagaattattaccataaaaggaattttttttgactttattataaattaat 13643098  T
Q  888 taccacattttccatgta-taactactatataatttcctttt 928  Q
    || || | |||| ||| | |||||||||||||||||||||||    
T  13643097 ta-cataatttcaatgcattaactactatataatttcctttt 13643057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 794 - 928
Target Start/End: Complemental strand, 13743622 - 13743482
Alignment:
Q  794 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgttttgactttattatgaattaat 887  Q
    ||||| ||||||||||||| ||  ||||| ||||| | ||||||||||||| ||    |||||||||||||||  | ||||||||||||||| |||||||    
T  13743622 gggtcctgctaaccggtgctcctagggcactggttaagcataccataaaagagaattattaccataaaaggaattttttttgactttattataaattaat 13743523  T
Q  888 taccacattttccatgta-taactactatataatttcctttt 928  Q
    || || | |||| ||| | |||||||||||||||||||||||    
T  13743522 ta-cataatttcaatgcattaactactatataatttcctttt 13743482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 845 - 935
Target Start/End: Complemental strand, 37373334 - 37373243
Alignment:
Q  845 attaccataaaaggaaactgtttt-gactttattatgaattaattaccacattttccatgtat-aactactatataatttccttttccatatc 935  Q
    ||||||||||||| |||||||||| ||||||||||| |||||||||| ||| |||| ||| || ||||| |||||||||||||||| ||||||    
T  37373334 attaccataaaagaaaactgttttcgactttattatcaattaattac-acaatttcaatgcattaactattatataatttcctttttcatatc 37373243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 850 - 935
Target Start/End: Original strand, 7304580 - 7304666
Alignment:
Q  850 cataaaaggaaactgtttt-gactttattatgaattaattaccacattttccatgta-taactactatataatttccttttccatatc 935  Q
    ||||||||||||||||||| ||||||||||| ||||||||| |||| |||| ||| | ||||||||||||||||| ||||| ||||||    
T  7304580 cataaaaggaaactgtttttgactttattataaattaatta-cacaatttcaatgcattaactactatataattttctttttcatatc 7304666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 845 - 937
Target Start/End: Complemental strand, 10870481 - 10870388
Alignment:
Q  845 attaccataaaaggaaactg-ttttgactttattatgaattaattaccacattttccatgta-taactactatataatttccttttccatatcat 937  Q
    |||||||||||||||||||| |||||| |||||||| ||||||||| |||| |||| ||||| |||||| |||||||||| |||||  |||||||    
T  10870481 attaccataaaaggaaactgtttttgattttattataaattaatta-cacaatttcaatgtattaactattatataattttcttttttatatcat 10870388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 830 - 935
Target Start/End: Original strand, 42035019 - 42035129
Alignment:
Q  830 cataccataaaaggga----ttaccataaaaggaaactgtttt-gactttattatgaattaattaccacattttccatgtat-aactactatataatttc 923  Q
    ||||||||||||||||    |||||||||||| ||| |||||| ||||||||||| |||||||||| ||| |||| ||  || |||||||||||||||||    
T  42035019 cataccataaaagggaattattaccataaaagaaaattgtttttgactttattataaattaattac-acaatttcaatacattaactactatataatttc 42035117  T
Q  924 cttttccatatc 935  Q
    ||||| ||||||    
T  42035118 ctttttcatatc 42035129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 830 - 933
Target Start/End: Complemental strand, 12204002 - 12203894
Alignment:
Q  830 cataccataaaaggga----ttaccataaaaggaaactgtttt-gactttattatgaattaattaccacattttccatgtat-aactactatataatttc 923  Q
    ||||||||||||||||    ||| ||||||||||||||||||| ||| ||||||| |||||||||| ||| |||| ||| || |||||||||||||||||    
T  12204002 cataccataaaagggaattattatcataaaaggaaactgtttttgacattattataaattaattac-acaatttcaatgcattaactactatataatttc 12203904  T
Q  924 cttttccata 933  Q
     |||| ||||    
T  12203903 ttttttcata 12203894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 830 - 933
Target Start/End: Complemental strand, 12448430 - 12448322
Alignment:
Q  830 cataccataaaaggga----ttaccataaaaggaaactgtttt-gactttattatgaattaattaccacattttccatgtat-aactactatataatttc 923  Q
    ||||||||||||||||    ||| ||||||||||||||||||| ||| ||||||| |||||||||| ||| |||| ||| || |||||||||||||||||    
T  12448430 cataccataaaagggaattattatcataaaaggaaactgtttttgacattattataaattaattac-acaatttcaatgcattaactactatataatttc 12448332  T
Q  924 cttttccata 933  Q
     |||| ||||    
T  12448331 ttttttcata 12448322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 847 - 933
Target Start/End: Complemental strand, 21595973 - 21595886
Alignment:
Q  847 taccataaaaggaaactg-ttttgactttattatgaattaattaccacattttccatgta-taactactatataatttccttttccata 933  Q
    |||||||||||||||||| ||||||| ||||||| ||||||||| |||| |||| ||| | ||||| ||||||||||||||||| ||||    
T  21595973 taccataaaaggaaactgtttttgacattattataaattaatta-cacaatttcaatgcattaactcctatataatttcctttttcata 21595886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 800 - 935
Target Start/End: Original strand, 9253908 - 9254049
Alignment:
Q  800 tgctaaccggtgccccggg--cattggttgaacataccataaaaggga----ttaccataaaaggaaactg-ttttgactttattatgaattaattacca 892  Q
    |||||||||||||||| ||  |||||||| | ||||||||||||| ||    |||| |||||||||||||| |||||||||||||||  |||||||| ||    
T  9253908 tgctaaccggtgcccctgggacattggttaagcataccataaaagagaattattactataaaaggaaactgtttttgactttattat-cattaatta-ca 9254005  T
Q  893 cattttccatgta-taactactatataatttccttttccatatc 935  Q
    || |||| ||| | ||||||||||| |||||| |||| ||||||    
T  9254006 caatttcaatgcattaactactataaaatttcatttttcatatc 9254049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 851 - 970
Target Start/End: Complemental strand, 16785209 - 16785085
Alignment:
Q  851 ataaaaggaaactgtttt-gactttattatgaattaattaccacattttccatgta-taactactatataatttccttttccatatcat--accagtgcc 946  Q
    |||||||||||||||||| ||||||||||| ||||||||| |||| |||| ||  | ||||| |||||||||||| |||| |||||| |  |||||||||    
T  16785209 ataaaaggaaactgtttttgactttattataaattaatta-cacaatttcaatacattaactgctatataatttcttttttcatatccttaaccagtgcc 16785111  T
Q  947 c-ggag-accggtaagcatttccctt 970  Q
    | |||| |||||| ||||||||||||    
T  16785110 ctggagcaccggttagcatttccctt 16785085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 845 - 935
Target Start/End: Complemental strand, 40831406 - 40831315
Alignment:
Q  845 attaccataaaaggaaactgtttt-gactttattatgaattaattaccacattttccatgtat-aactactatataatttccttttccatatc 935  Q
    ||||||||||||| ||| |||||| ||||||||||| |||||||||  ||| |||| ||| || |||||||||||||||| ||||| ||||||    
T  40831406 attaccataaaagaaaattgtttttgactttattataaattaattat-acaatttcaatgcattaactactatataattttctttttcatatc 40831315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 853 - 934
Target Start/End: Original strand, 3930298 - 3930380
Alignment:
Q  853 aaaaggaaactgtttt-gactttattatgaattaattaccacattttccatgta-taactactatataatttccttttccatat 934  Q
    |||||||||||||||| ||||||||||| ||||||||| ||||  ||| ||| | |||||||||||||||||||| || |||||    
T  3930298 aaaaggaaactgtttttgactttattatcaattaatta-cacaacttcaatgcattaactactatataatttcctctttcatat 3930380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 822 - 935
Target Start/End: Complemental strand, 32114065 - 32113946
Alignment:
Q  822 tggttgaacataccataaaaggga----ttaccataaaagg-aaactgttttg-actttattatgaattaattaccacattttccatgtat-aactacta 914  Q
    ||||| ||||||| ||||||||||    ||| ||||||||| ||||||||||  |||||||||| |||||||||  ||| |||| ||| || ||||||||    
T  32114065 tggttaaacatactataaaagggaattattatcataaaagggaaactgttttttactttattataaattaattaa-acaatttcaatgcattaactacta 32113967  T
Q  915 tataatttccttttccatatc 935  Q
    |||||||||||||| ||||||    
T  32113966 tataatttcctttttcatatc 32113946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 865 - 934
Target Start/End: Complemental strand, 34192883 - 34192814
Alignment:
Q  865 ttttgactttattatgaattaattaccacattttccatgta-taactactatataatttccttttccatat 934  Q
    ||||||||||||||| ||||||||| |||| |||| ||| | |||||| |||||||||||||||| |||||    
T  34192883 ttttgactttattataaattaatta-cacaatttcaatgcattaactagtatataatttcctttttcatat 34192814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 846 - 890
Target Start/End: Complemental strand, 22956833 - 22956788
Alignment:
Q  846 ttaccataaaaggaaactg-ttttgactttattatgaattaattac 890  Q
    ||||||||||||||||||| ||||||| ||||||| ||||||||||    
T  22956833 ttaccataaaaggaaactgtttttgacattattataaattaattac 22956788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 850 - 890
Target Start/End: Original strand, 24843341 - 24843382
Alignment:
Q  850 cataaaaggaaactg-ttttgactttattatgaattaattac 890  Q
    ||||||||||||||| ||||||||||||||| ||||||||||    
T  24843341 cataaaaggaaactgattttgactttattataaattaattac 24843382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 845 - 928
Target Start/End: Original strand, 42433601 - 42433684
Alignment:
Q  845 attaccataaaaggaaactg-ttttgactttattatgaattaattaccacattttccatgta-taactactatataatttcctttt 928  Q
    ||||||||||||| |||||| |||||||||| |||| ||||||||| |||| |||| ||| | |||||| ||||||||||||||||    
T  42433601 attaccataaaagaaaactgtttttgacttt-ttataaattaatta-cacaatttcaatgcattaactattatataatttcctttt 42433684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 7e-24; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 791 - 970
Target Start/End: Original strand, 24798400 - 24798590
Alignment:
Q  791 tttgggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttt-gactttattatgaat 883  Q
    |||||||| ||||||| ||||||||  ||||| ||||| | ||||| ||||||||||    ||||||||||||||||||||||| ||||||||||| |||    
T  24798400 tttgggtcctgctaactggtgcccccggggcactggttaagcatactataaaagggaattattaccataaaaggaaactgtttttgactttattataaat 24798499  T
Q  884 taattaccacattttccatgtat-aactactatataatttccttttccatatcat--accagtgcccggag--accggtaagcatttccctt 970  Q
    ||||||| ||| |||| ||| || |||||||||||||||||||||| |||||| |  || ||||||||| |  |||||| ||||||||||||    
T  24798500 taattac-acaatttcaatgcattaactactatataatttcctttttcatatcctcaacaagtgcccgggggcaccggttagcatttccctt 24798590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 794 - 933
Target Start/End: Original strand, 42044294 - 42044439
Alignment:
Q  794 gggtcatgctaaccggtgcccc-gggcattggttgaacataccataaaaggg----attaccataaaaggaaactg-ttttgactttattatgaattaat 887  Q
    |||||||||||||||||||||| ||||| ||||| |||||||||||||||||    ||||||||||||| |||||| ||||||| ||||||| |||||||    
T  42044294 gggtcatgctaaccggtgccccggggcactggttaaacataccataaaagggaattattaccataaaagaaaactgtttttgacattattataaattaat 42044393  T
Q  888 taccacattttccatgta-taactactatataatttccttttccata 933  Q
    || |||| |||| || || |||||||||||||||||| |||| ||||    
T  42044394 ta-cacaatttcaatctattaactactatataatttcttttttcata 42044439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 791 - 935
Target Start/End: Complemental strand, 4628755 - 4628604
Alignment:
Q  791 tttgggtcatgctaaccggtgccccg--ggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgttt-tgactttattatgaat 883  Q
    |||||||| ||||||||||||||||   |||| ||||| | ||||||||||||||||    |||||||||||| ||||||||| |||||||||||| |||    
T  4628755 tttgggtcctgctaaccggtgcccctaaggcactggttaagcataccataaaagggaattattaccataaaagtaaactgtttctgactttattataaat 4628656  T
Q  884 taattaccacattttccatgtat-aactactatataatttccttttccatatc 935  Q
    ||||||  ||| |||| |||||| |||||||||||||||||||||| ||||||    
T  4628655 taattaa-acaatttcaatgtattaactactatataatttcctttttcatatc 4628604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 794 - 933
Target Start/End: Complemental strand, 34333469 - 34333324
Alignment:
Q  794 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgttttgactttattatgaattaat 887  Q
    ||||| ||||||||||||||||  |||||  |||| |||||||||||||| |||    |||||||||||||||||||||||||| ||||||| |||||||    
T  34333469 gggtcctgctaaccggtgcccccggggcacgggttaaacataccataaaaaggaattattaccataaaaggaaactgttttgacattattataaattaat 34333370  T
Q  888 taccacattttccatgta-taactactatataatttccttttccata 933  Q
    || |||| |||| ||| | ||| ||||||||||||||||||| ||||    
T  34333369 ta-cacaatttcaatgcattaattactatataatttcctttttcata 34333324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 802 - 935
Target Start/End: Complemental strand, 47083232 - 47083093
Alignment:
Q  802 ctaaccggtgccccgg-gcattggttgaacataccataaaaggga----ttaccataaaaggaaactg-ttttgactttattatgaattaattaccacat 895  Q
    |||||||||||||||| ||||||||| |||||| |||||||||||    ||||||||||||||||||| |||| |||||||||| ||||||||| ||||     
T  47083232 ctaaccggtgccccggagcattggttaaacatatcataaaagggaattattaccataaaaggaaactgtttttaactttattatcaattaatta-cacaa 47083134  T
Q  896 tttccatgta-taactactatataatttccttttccatatc 935  Q
    |||| ||  | |||||||||||||||||| |||| ||||||    
T  47083133 tttcaatacattaactactatataatttcttttttcatatc 47083093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 793 - 935
Target Start/End: Original strand, 29993486 - 29993635
Alignment:
Q  793 tgggtcatgctaaccggtgcc-ccggg-cattggttgaacataccataaaaggga----ttaccataaaaggaaactg-ttttgactttattatgaatta 885  Q
    |||||| ||||||||| |||| ||||| || ||||| | ||||||||||||||||    |||||||||||||||| || ||||||||||||||| |||||    
T  29993486 tgggtcctgctaaccgatgcctccgggacactggttaagcataccataaaagggaattattaccataaaaggaaattgattttgactttattataaatta 29993585  T
Q  886 attaccacattttccatgtat-aactactatataatttccttttccatatc 935  Q
    ||||| ||| |||| ||| || |||||||||||||||||||||| ||||||    
T  29993586 attac-acaatttcaatgcattaactactatataatttcctttttcatatc 29993635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 802 - 935
Target Start/End: Complemental strand, 30810833 - 30810693
Alignment:
Q  802 ctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttt-gactttattatgaattaattaccaca 894  Q
    ||||||||| ||||  ||||||||||| |||||||||||||||  |    |||||||||||| |||||||||| ||||||||||| |||||||||| |||    
T  30810833 ctaaccggtacccctggggcattggttaaacataccataaaagaaaattattaccataaaagaaaactgtttttgactttattataaattaattac-aca 30810735  T
Q  895 ttttccatgtat-aactactatataatttccttttccatatc 935  Q
     |||| ||| || |||||||||||||||||||||| ||||||    
T  30810734 atttcaatgcattaactactatataatttcctttttcatatc 30810693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 793 - 933
Target Start/End: Complemental strand, 24438664 - 24438517
Alignment:
Q  793 tgggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactg-ttttgactttattatgaatta 885  Q
    |||||| ||||||||||||||||  ||||| ||||| | ||||||||||||||||    ||||||||||||||||||| ||||||| ||||||| |||||    
T  24438664 tgggtcctgctaaccggtgcccccggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgacattattataaatta 24438565  T
Q  886 attaccacattttccatgta-taactactatataatttccttttccata 933  Q
    |||| || | |||| ||| | ||||||||||||| ||||||||| ||||    
T  24438564 atta-cataatttcaatgcattaactactatatagtttcctttttcata 24438517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 794 - 934
Target Start/End: Original strand, 12218437 - 12218583
Alignment:
Q  794 gggtcatgctaaccggtgccccggg-cattggttgaacataccataaaaggga----ttaccataaaaggaaactgttttg-actttattatgaattaat 887  Q
    ||||| |||||||||||| |||||| || ||||| ||||||||||||||| ||    |||||||||||||||||| ||||  | |||||||| |||||||    
T  12218437 gggtcctgctaaccggtgtcccggggcactggttaaacataccataaaagagaattattaccataaaaggaaactattttttattttattataaattaat 12218536  T
Q  888 taccacattttccatgtat-aactactatataatttccttttccatat 934  Q
    ||| ||| |||| ||| || |||||||||||||||||||||| |||||    
T  12218537 tac-acaatttcaatgcattaactactatataatttcctttttcatat 12218583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 830 - 935
Target Start/End: Complemental strand, 47839640 - 47839530
Alignment:
Q  830 cataccataaaaggga----ttaccataaaaggaaactg-ttttgactttattatgaattaattaccacattttccatgta-taactactatataatttc 923  Q
    ||||||||||||||||    ||||||||||||||||||| ||||||||||||||| ||||||||| |||| |||| ||||| |||||| ||||||| |||    
T  47839640 cataccataaaagggaattattaccataaaaggaaactgtttttgactttattataaattaatta-cacaatttcaatgtattaactattatataaattc 47839542  T
Q  924 cttttccatatc 935  Q
    ||||| ||||||    
T  47839541 ctttttcatatc 47839530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 850 - 949
Target Start/End: Original strand, 27456175 - 27456277
Alignment:
Q  850 cataaaaggaaactg-ttttgactttattatgaattaattaccacattttccatgtat-aactactatataatttccttttccatatcat--accagtgc 945  Q
    ||||||||||||||| ||||||||||||||| |||||||||| ||| |||| ||| || ||||||||||||||||| ||||||||||| |  ||||||||    
T  27456175 cataaaaggaaactgcttttgactttattataaattaattac-acaatttcaatgcattaactactatataatttctttttccatatccttaaccagtgc 27456273  T
Q  946 ccgg 949  Q
    ||||    
T  27456274 ccgg 27456277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 830 - 969
Target Start/End: Complemental strand, 5239433 - 5239284
Alignment:
Q  830 cataccataaaaggga----ttaccataaaaggaaactgtttt-gactttattatgaattaattaccacattttccatgtat-aactactatataatttc 923  Q
    ||||||||||||||||    ||||||||||| ||||||||||| ||| ||||||| |||||||||| ||| |||| ||| || |||||||||||||||||    
T  5239433 cataccataaaagggaattattaccataaaaagaaactgtttttgacattattataaattaattac-acaatttcaatgcattaactactatataatttc 5239335  T
Q  924 cttttccatatcat--accagtgc-ccggag--accggtaagcatttccct 969  Q
    ||||| |||| |||  |||||||| ||||||  |||||| |||||||||||    
T  5239334 ctttttcataccattaaccagtgctccggaggcaccggttagcatttccct 5239284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 816 - 928
Target Start/End: Original strand, 23363191 - 23363308
Alignment:
Q  816 gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactg-ttttgactttattatgaattaattaccacattttccatgta-taac 909  Q
    ||||| ||||| ||||||||||||||| ||    ||||||||||||||||||| |||| |||||||||| ||||||||| |||| |||| ||| | ||||    
T  23363191 gggcactggttaaacataccataaaagagaaatattaccataaaaggaaactgtttttaactttattataaattaatta-cacaatttcaatgcattaac 23363289  T
Q  910 tactatataatttcctttt 928  Q
    ||||||| |||||||||||    
T  23363290 tactatacaatttcctttt 23363308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 794 - 935
Target Start/End: Complemental strand, 34606447 - 34606299
Alignment:
Q  794 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactg-ttttgactttattatgaattaa 886  Q
    ||||| ||||||||||||| ||  |||||  |||| | |||||||||||||| |    ||||||||||||||||||| ||||||||||||||| ||||||    
T  34606447 gggtcctgctaaccggtgctcccggggcacgggttaagcataccataaaaggtaattattaccataaaaggaaactgcttttgactttattataaattaa 34606348  T
Q  887 ttaccacattttccatgtat-aactactatataatttccttttccatatc 935  Q
    || | ||| |||| ||| || || ||||||||||||||||||| ||||||    
T  34606347 tttc-acaatttcaatgcattaattactatataatttcctttttcatatc 34606299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 820 - 935
Target Start/End: Complemental strand, 28588067 - 28587947
Alignment:
Q  820 attggttgaacataccataaaaggga----ttaccataaaaggaaactgtttt-gactttattatgaattaattaccacattttccatgta-taactact 913  Q
    ||||||| ||||||||||||||||||    |||||||||||| ||| |||||| ||||||||||| ||||||||| |||| |||| ||  | | ||||||    
T  28588067 attggttaaacataccataaaagggaattattaccataaaagaaaattgtttttgactttattataaattaatta-cacaatttcaatacattgactact 28587969  T
Q  914 atataatttccttttccatatc 935  Q
    ||||||||||||||| ||||||    
T  28587968 atataatttcctttttcatatc 28587947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 800 - 890
Target Start/End: Original strand, 13064882 - 13064980
Alignment:
Q  800 tgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactg--ttttgactttattatgaattaattac 890  Q
    ||||||||||||||||  | ||| ||||| | ||||||||||||||||    |||||||||||||||||||  ||||||||||||||| ||||||||||    
T  13064882 tgctaaccggtgcccctagagcactggttaagcataccataaaagggaattattaccataaaaggaaactgttttttgactttattataaattaattac 13064980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 847 - 935
Target Start/End: Original strand, 34546373 - 34546462
Alignment:
Q  847 taccataaaaggaaactgtttt-gactttattatgaattaattaccacattttccatgtat-aactactatataatttccttttccatatc 935  Q
    ||||||||||| |||||||||| ||||||| ||| |||||||||| ||| |||| ||| || |||||||||||||||||||||| ||||||    
T  34546373 taccataaaagtaaactgtttttgactttactataaattaattac-acaatttcaatgcattaactactatataatttcctttttcatatc 34546462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 785 - 889
Target Start/End: Original strand, 525067 - 525177
Alignment:
Q  785 ttttaatttgggtcatgctaaccggtgccccgg-gcattggttgaacataccataaaaggga----ttaccataaaaggaaactg-ttttgactttatta 878  Q
    |||| ||||||||| ||||||||||||| |||| | | ||||| |||||| |||||||| ||    ||||||||||||||||||| |||||| |||||||    
T  525067 tttttatttgggtcctgctaaccggtgctccggagtactggttaaacatatcataaaagagaattattaccataaaaggaaactgtttttgattttatta 525166  T
Q  879 tgaattaatta 889  Q
    | |||||||||    
T  525167 taaattaatta 525177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 845 - 935
Target Start/End: Original strand, 8754642 - 8754733
Alignment:
Q  845 attaccataaaaggaaactgtttt-gactttattatgaattaattaccacattttccatgta-taactactatataatttccttttccatatc 935  Q
    ||||||||||||  |||||||||| ||||||||||| ||||||||| |||| |||| ||| | |||||||||||||||||| |||| ||||||    
T  8754642 attaccataaaacaaaactgtttttgactttattataaattaatta-cacaatttcaatgcattaactactatataatttcatttttcatatc 8754733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 318 - 389
Target Start/End: Complemental strand, 15644767 - 15644696
Alignment:
Q  318 cggtggttttttgggacaccttgtgctaaccatatca-ttttgcaatgttaatataatccatttttgtttgtt 389  Q
    ||||||||| |||| ||||||||||||||| |||||| |||||||| ||||||||||| |||||||| |||||    
T  15644767 cggtggtttcttggcacaccttgtgctaacgatatcacttttgcaa-gttaatataattcatttttgcttgtt 15644696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 845 - 935
Target Start/End: Complemental strand, 18486090 - 18485999
Alignment:
Q  845 attaccataaaaggaaactgttttga-ctttattatgaattaattaccacattttccatgtat-aactactatataatttccttttccatatc 935  Q
    |||||||||||||||||||||||| | ||||||||| |||||||||| ||| |||| ||  || || |||||||||||||||||||| |||||    
T  18486090 attaccataaaaggaaactgtttttaactttattataaattaattac-acaatttcaatacattaattactatataatttccttttcaatatc 18485999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 794 - 923
Target Start/End: Original strand, 37674106 - 37674240
Alignment:
Q  794 gggtcatgctaaccggtgccccgggcattggttgaacataccataaaagggat----taccataaaaggaaactgtttt-gactttattatgaattaatt 888  Q
    ||||| |||||||||||||||||| || ||||| | ||||||||||||   |     || |||||||| |||||||||| ||||||||||| ||||||||    
T  37674106 gggtcctgctaaccggtgccccggacactggttaagcataccataaaaaaaaaattatatcataaaagaaaactgtttttgactttattataaattaatt 37674205  T
Q  889 accacattttccatgta-taactactatataatttc 923  Q
    | |||| |||| ||| | ||||||||||||||||||    
T  37674206 a-cacaatttcaatgcattaactactatataatttc 37674240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 816 - 933
Target Start/End: Complemental strand, 45045932 - 45045810
Alignment:
Q  816 gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactg-ttttgactttattatgaattaattaccacattttccatgta-taac 909  Q
    ||||| ||||| | ||||||||||||||||    ||| ||||||||||||||| ||||||| ||||||| ||||||||| |||| |||| ||| | |||     
T  45045932 gggcactggttaagcataccataaaagggaattattatcataaaaggaaactgtttttgacattattataaattaatta-cacaatttcaatgcattaat 45045834  T
Q  910 tactatataatttccttttccata 933  Q
    |||||||||||||| |||| ||||    
T  45045833 tactatataatttcatttttcata 45045810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 865 - 928
Target Start/End: Original strand, 11686402 - 11686465
Alignment:
Q  865 ttttgactttattatgaattaattaccacattttccatgtat-aactactatataatttcctttt 928  Q
    ||||||||||||||| |||||||||| ||| |||| ||| || ||||||||||||||||||||||    
T  11686402 ttttgactttattataaattaattac-acaatttcaatgcattaactactatataatttcctttt 11686465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 845 - 890
Target Start/End: Original strand, 7689257 - 7689303
Alignment:
Q  845 attaccataaaaggaaactgtttt-gactttattatgaattaattac 890  Q
    ||||||||||||| |||||||||| ||||||||||| ||||||||||    
T  7689257 attaccataaaagaaaactgtttttgactttattataaattaattac 7689303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 789 - 843
Target Start/End: Original strand, 34556887 - 34556941
Alignment:
Q  789 aatttgggtcatgctaaccggtgccccgggcattggttgaacataccataaaagg 843  Q
    |||| ||||||||||||||||||||||||||| ||||| | ||||| | ||||||    
T  34556887 aattagggtcatgctaaccggtgccccgggcactggttaagcatacaaaaaaagg 34556941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 845 - 890
Target Start/End: Original strand, 47118046 - 47118092
Alignment:
Q  845 attaccataaaaggaaactg-ttttgactttattatgaattaattac 890  Q
    |||||||||||||||||||| | ||||||||||||| ||||||||||    
T  47118046 attaccataaaaggaaactgctcttgactttattataaattaattac 47118092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 316 - 389
Target Start/End: Original strand, 17507479 - 17507552
Alignment:
Q  316 tgcggtggttttttgggacaccttgtgctaaccatatcattttgcaatgttaatataatccatttttgtttgtt 389  Q
    ||||||||| | |||| ||||||||||||    ||||||| ||||| ||||| ||||||||||||||| |||||    
T  17507479 tgcggtggtatcttggcacaccttgtgcttttgatatcatcttgcattgttattataatccatttttgattgtt 17507552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 316 - 389
Target Start/End: Complemental strand, 17545735 - 17545662
Alignment:
Q  316 tgcggtggttttttgggacaccttgtgctaaccatatcattttgcaatgttaatataatccatttttgtttgtt 389  Q
    ||||||||| | |||| ||||||||||||    ||||||| ||||| ||||| ||||||||||||||| |||||    
T  17545735 tgcggtggtatcttggcacaccttgtgcttttgatatcatcttgcattgttattataatccatttttgattgtt 17545662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 845 - 928
Target Start/End: Original strand, 43594093 - 43594177
Alignment:
Q  845 attaccataaaaggaaactgtttt-gactttattatgaattaattaccacattttccatgta-taactactatataatttcctttt 928  Q
    |||| ||||| ||||||||||||| ||||||||||| |||||||||  ||| |||| ||| | |||||| ||||||||||||||||    
T  43594093 attatcataagaggaaactgtttttgactttattataaattaatta-tacaatttcaatgcattaactattatataatttcctttt 43594177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 7e-24; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 794 - 935
Target Start/End: Original strand, 26467124 - 26467272
Alignment:
Q  794 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttt-gactttattatgaattaa 886  Q
    |||||||||||||||||||| |  ||||| |||||  |||||||||||||||||    |||||||||||||||||| |||| ||||||||||| ||||||    
T  26467124 gggtcatgctaaccggtgcctccggggcactggttagacataccataaaagggaattattaccataaaaggaaactatttttgactttattataaattaa 26467223  T
Q  887 ttaccacattttccatgtat-aactactatataatttccttttccatatc 935  Q
    |||| ||| |||| ||| || |||||||||||||||||||||| ||||||    
T  26467224 ttac-acaatttcaatgcattaactactatataatttcctttttcatatc 26467272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 793 - 933
Target Start/End: Complemental strand, 3515953 - 3515806
Alignment:
Q  793 tgggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttt-gactttattatgaatta 885  Q
    |||||| ||||||||||||||||  |||||  |||| ||||||||||||||||||    ||||||||||||||||||||||| ||| ||||||| |||||    
T  3515953 tgggtcctgctaaccggtgcccctggggcacaggttaaacataccataaaagggaattattaccataaaaggaaactgtttttgacattattataaatta 3515854  T
Q  886 attaccacattttccatgtat-aactactatataatttccttttccata 933  Q
    ||||| ||| |||| ||| || |||||||||||||||||||||| ||||    
T  3515853 attac-acaatttcaatgcattaactactatataatttcctttttcata 3515806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 794 - 933
Target Start/End: Complemental strand, 392282 - 392136
Alignment:
Q  794 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttt-gactttattatgaattaa 886  Q
    ||||| ||||||||||||||||  ||||| ||||| | ||||||||||||| ||    ||||||||||||||||||||||| ||| ||||||| ||||||    
T  392282 gggtcctgctaaccggtgcccccggggcactggttaagcataccataaaagagaattattaccataaaaggaaactgtttttgacattattataaattaa 392183  T
Q  887 ttaccacattttccatgtat-aactactatataatttccttttccata 933  Q
    |||| ||| |||| ||| || |||||||||||||||||||||| ||||    
T  392182 ttac-acaatttcaatgcattaactactatataatttcctttttcata 392136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 794 - 933
Target Start/End: Original strand, 32929508 - 32929654
Alignment:
Q  794 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactg-ttttgactttattatgaattaa 886  Q
    ||||| ||||||||||||||||  ||||| ||||| | ||||||||||||||||    ||||||||||||||||||| ||||||||||||||| ||||||    
T  32929508 gggtcctgctaaccggtgcccccggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattataaattaa 32929607  T
Q  887 ttaccacattttccatgta-taactactatataatttccttttccata 933  Q
    ||| |||| |||| ||| | ||| || |||||||||||||||| ||||    
T  32929608 tta-cacaatttcaatgcattaattaatatataatttcctttttcata 32929654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 800 - 928
Target Start/End: Original strand, 32985199 - 32985334
Alignment:
Q  800 tgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttt-gactttattatgaattaattacca 892  Q
    ||||||||||||||||  ||||| ||||| | ||||||||||||||||    ||| ||||||||||||||||||| ||||||||||| |||||||||| |    
T  32985199 tgctaaccggtgcccccggggcactggttaagcataccataaaagggaattattatcataaaaggaaactgtttttgactttattataaattaattac-a 32985297  T
Q  893 cattttccatgtat-aactactatataatttcctttt 928  Q
    || |||| ||  || ||||||||||||||||||||||    
T  32985298 caatttcaatacattaactactatataatttcctttt 32985334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 847 - 949
Target Start/End: Original strand, 34477609 - 34477714
Alignment:
Q  847 taccataaaaggaaactgttt-tgactttattatgaattaattaccacattttccatgtat-aactactatataatttccttttccatatcat--accag 942  Q
    ||||||||||||||||||||| |||||||||||| |||||||||| ||| |||| ||| || |||||||||||||||||||||| |||||| |  |||||    
T  34477609 taccataaaaggaaactgtttctgactttattatcaattaattac-acaatttcaatgcattaactactatataatttcctttttcatatccttaaccag 34477707  T
Q  943 tgcccgg 949  Q
    |||||||    
T  34477708 tgcccgg 34477714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 791 - 935
Target Start/End: Complemental strand, 35044077 - 35043928
Alignment:
Q  791 tttgggtcatgctaaccggtgcccc-gggcattggttgaacataccataaaaggg----attaccataaaaggaaactg-ttttgactttattatgaatt 884  Q
    ||||||||||| ||||||||||||| ||||| ||||| | ||||||||||||| |    ||||||||||||| |||||| ||||||||||||||| ||||    
T  35044077 tttgggtcatgttaaccggtgccccggggcactggttaagcataccataaaagagaattattaccataaaagaaaactgtttttgactttattataaatt 35043978  T
Q  885 aattaccacattttccatgta-taactactatataatttccttttccatatc 935  Q
    |||   |||| |||| ||| | |||||||||||||||||| |||| ||||||    
T  35043977 aat--acacaatttcaatgaattaactactatataatttcttttttcatatc 35043928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 845 - 933
Target Start/End: Complemental strand, 12525848 - 12525759
Alignment:
Q  845 attaccataaaaggaaactgt-tttgactttattatgaattaattaccacattttccatgtat-aactactatataatttccttttccata 933  Q
    |||||||||||| |||||||| |||||| ||||||| |||||||||| |||||||| |||||| |||||||||||||||||||||| ||||    
T  12525848 attaccataaaatgaaactgtgtttgacattattataaattaattac-acattttcaatgtattaactactatataatttcctttttcata 12525759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 847 - 935
Target Start/End: Complemental strand, 20898075 - 20897986
Alignment:
Q  847 taccataaaaggaaactgttt-tgactttattatgaattaattaccacattttccatgtat-aactactatataatttccttttccatatc 935  Q
    ||||||||||||||||||||| |||||||||||| |||||||||| ||| |||| ||| || |||||||||||||||||||||| ||||||    
T  20898075 taccataaaaggaaactgtttctgactttattatcaattaattac-acaatttcaatgcattaactactatataatttcctttttcatatc 20897986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 793 - 935
Target Start/End: Original strand, 12145116 - 12145265
Alignment:
Q  793 tgggtcatgctaaccggtgcc-ccgg-gcattggttgaacataccataaaagg----gattaccataaaaggaaactg-ttttgactttattatgaatta 885  Q
    |||||| |||||||||||||| |||| ||| ||||| | ||||| ||||||||     |||| ||||||||||||||| ||||||||||||||| |||||    
T  12145116 tgggtcctgctaaccggtgcctccggagcactggttaagcatactataaaaggaaattattatcataaaaggaaactgtttttgactttattataaatta 12145215  T
Q  886 attaccacattttccatgta-taactactatataatttccttttccatatc 935  Q
    |||| |||| |||| ||| | ||||||||||||||||||||||| ||||||    
T  12145216 atta-cacaatttcaatgcattaactactatataatttcctttttcatatc 12145265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 845 - 935
Target Start/End: Original strand, 18276672 - 18276763
Alignment:
Q  845 attaccataaaaggaaactgtttt-gactttattatgaattaattaccacattttccatgtat-aactactatataatttccttttccatatc 935  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||| |||  ||| ||| || |||||||||||||||||||||| ||||||    
T  18276672 attaccataaaaggaaactgtttttgactttattataaattaattac-acaaattcaatgcattaactactatataatttcctttttcatatc 18276763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 794 - 937
Target Start/End: Complemental strand, 2581138 - 2580988
Alignment:
Q  794 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttt-gactttattatgaattaa 886  Q
    ||||| ||||||||||||| ||  ||| ||||||| | ||||||||||||||||    |||||||||||||||| | |||| ||||||||||| ||||||    
T  2581138 gggtcctgctaaccggtgctcccggggtattggttaagcataccataaaagggaattattaccataaaaggaaattatttttgactttattataaattaa 2581039  T
Q  887 ttaccacattttccatgtat-aactactatataatttccttttccatatcat 937  Q
    |||| | | |||| ||| || ||||||||||||||||||||||  |||||||    
T  2581038 ttac-ataatttcaatgcattaactactatataatttccttttttatatcat 2580988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 794 - 933
Target Start/End: Complemental strand, 4215881 - 4215735
Alignment:
Q  794 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactg-ttttgactttattatgaattaa 886  Q
    ||||| ||||||||| ||||||  ||||| ||||| | |||||||||||||| |    ||||||||||||||||||| ||||||| ||||||| ||||||    
T  4215881 gggtcctgctaaccgatgcccccggggcactggttaagcataccataaaaggaaattattaccataaaaggaaactgtttttgacattattataaattaa 4215782  T
Q  887 ttaccacattttccatgta-taactactatataatttccttttccata 933  Q
    ||| |||| |||| ||| | |||||| |||||||||||||||| ||||    
T  4215781 tta-cacaatttcaatgcattaactattatataatttcctttttcata 4215735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 830 - 935
Target Start/End: Original strand, 29451153 - 29451263
Alignment:
Q  830 cataccataaaaggga----ttaccataaaaggaaactgt-tttgactttattatgaattaattaccacattttccatgtat-aactactatataatttc 923  Q
    ||||||||||||||||    ||| |||||||||||||||| |||||||||||||| | |||||||| ||| |||| ||| || |||||||||||||||||    
T  29451153 cataccataaaagggaattattatcataaaaggaaactgtgtttgactttattataatttaattac-acaatttcaatgcattaactactatataatttc 29451251  T
Q  924 cttttccatatc 935  Q
    ||||| ||||||    
T  29451252 ctttttcatatc 29451263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 794 - 935
Target Start/End: Complemental strand, 23402324 - 23402176
Alignment:
Q  794 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactg-ttttgactttattatgaattaa 886  Q
    ||||| |||||||||||||| |  |||||  |||| | |||||||||||||| |    ||||||||||||||||||| ||||||||||||||| ||||||    
T  23402324 gggtcctgctaaccggtgcctccggggcacgggttaagcataccataaaaggtaattattaccataaaaggaaactgtttttgactttattataaattaa 23402225  T
Q  887 ttaccacattttccatgta-taactactatataatttccttttccatatc 935  Q
    ||  |||| |||| ||| | ||| ||||||||||||||||||| ||||||    
T  23402224 tt-tcacaatttcaatgcattaattactatataatttcctttttcatatc 23402176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 791 - 935
Target Start/End: Original strand, 1391175 - 1391326
Alignment:
Q  791 tttgggtcatgctaaccggtgccccggg--cattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttt-gactttattatgaat 883  Q
    |||||||| ||||||||||||  || ||  || ||||| | ||||||||||||||||    ||| |||||||| |||||||||| ||||||||||| |||    
T  1391175 tttgggtcctgctaaccggtgttcctggaacactggttaagcataccataaaagggaattattatcataaaagaaaactgtttttgactttattataaat 1391274  T
Q  884 taattaccacattttccatgtat-aactactatataatttccttttccatatc 935  Q
    ||||||  ||| |||| ||| || |||||||||||||||||||||| ||||||    
T  1391275 taattat-acaatttcaatgcattaactactatataatttcctttttcatatc 1391326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 845 - 935
Target Start/End: Complemental strand, 2350781 - 2350690
Alignment:
Q  845 attaccataaaaggaaactgtttt-gactttattatgaattaattaccacattttccatgtat-aactactatataatttccttttccatatc 935  Q
    ||||||||||||||||||| |||| ||||||||||| |||||||||| ||| |||| ||  || |||||||||||||||||||||| ||||||    
T  2350781 attaccataaaaggaaactatttttgactttattataaattaattac-acaatttcaatacattaactactatataatttcctttttcatatc 2350690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 794 - 933
Target Start/End: Complemental strand, 27433678 - 27433532
Alignment:
Q  794 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttt-gactttattatgaattaa 886  Q
    ||||| ||||||||||||||||  ||| |  |||| ||||||||||||||||||    |||||||||||||||||| |||| ||| |||| || ||||||    
T  27433678 gggtcttgctaaccggtgcccccggggaacgggttaaacataccataaaagggaattattaccataaaaggaaactatttttgacattatgataaattaa 27433579  T
Q  887 ttaccacattttccatgtat-aactactatataatttccttttccata 933  Q
    |||| ||| |||  ||| || |||||||||||||||||||||| ||||    
T  27433578 ttac-acaattttaatgcattaactactatataatttcctttttcata 27433532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 830 - 935
Target Start/End: Original strand, 7851197 - 7851307
Alignment:
Q  830 cataccataaaaggga----ttaccataaaaggaaactgtttt-gactttattatgaattaattaccacattttccatgtat-aactactatataatttc 923  Q
    ||||||||||||||||    ||||||||||||||||||||||| ||||||||||| |||||||||| ||| |||  ||| || || |||||||||||||     
T  7851197 cataccataaaagggaattattaccataaaaggaaactgtttttgactttattataaattaattac-acaattttaatgcattaattactatataatttt 7851295  T
Q  924 cttttccatatc 935  Q
    ||||| ||||||    
T  7851296 ctttttcatatc 7851307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 794 - 935
Target Start/End: Original strand, 25165413 - 25165561
Alignment:
Q  794 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttt-gactttattatgaattaa 886  Q
    ||||| ||||||||||||| ||  ||||||||||| | |||| | |||||| ||    ||| |||||||| |||||||||| ||||||||||| ||||||    
T  25165413 gggtcctgctaaccggtgctcccagggcattggttaagcatatcgtaaaagagaattattatcataaaagaaaactgtttttgactttattataaattaa 25165512  T
Q  887 ttaccacattttccatgta-taactactatataatttccttttccatatc 935  Q
    ||| |||| |||| || || |||||||||||||||||| |||| ||||||    
T  25165513 tta-cacaatttcaatatattaactactatataatttcttttttcatatc 25165561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 845 - 935
Target Start/End: Original strand, 21878404 - 21878495
Alignment:
Q  845 attaccataaaaggaaactgtttt-gactttattatgaattaattaccacattttccatgta-taactactatataatttccttttccatatc 935  Q
    |||||||||||| ||||||||||| ||||||||||| |||||||||  | | |||| ||| | ||||||||||||||||||||||| ||||||    
T  21878404 attaccataaaaagaaactgtttttgactttattataaattaatta-aataatttcaatgcattaactactatataatttcctttttcatatc 21878495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 857 - 935
Target Start/End: Original strand, 34396596 - 34396675
Alignment:
Q  857 ggaaactgtttt-gactttattatgaattaattaccacattttccatgtat-aactactatataatttccttttccatatc 935  Q
    |||||||||||| ||||||||||| |||||||||| ||| |||| ||| || |||||||||||||||||||||| ||||||    
T  34396596 ggaaactgtttttgactttattataaattaattac-acaatttcaatgcattaactactatataatttcctttttcatatc 34396675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 793 - 928
Target Start/End: Complemental strand, 31280502 - 31280366
Alignment:
Q  793 tgggtcatgctaaccggtgcc-ccgggcattggttgaacataccataaaagggattaccataaaaggaaactgtttt-gactttattatgaattaattac 890  Q
    |||||| |||||||||||||| ||||||| | ||| | ||||||||| ||   ||||| |||||||||||| ||||| ||| ||||||| |||||||||     
T  31280502 tgggtcctgctaaccggtgcctccgggcactcgttaagcataccatagaatt-attactataaaaggaaaccgtttttgacattattataaattaattat 31280404  T
Q  891 cacattttccatgtat-aactactatataatttcctttt 928  Q
     ||| |||| ||| || ||||||||||||||||||||||    
T  31280403 -acaatttcaatgcattaactactatataatttcctttt 31280366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 845 - 928
Target Start/End: Complemental strand, 961138 - 961054
Alignment:
Q  845 attaccataaaaggaaactgttt-tgactttattatgaattaattaccacattttccatgtat-aactactatataatttcctttt 928  Q
    |||| |||||||||||| ||||| |||||||||||| |||||||||| ||| |||  ||| || ||||||||||||||||||||||    
T  961138 attatcataaaaggaaattgtttctgactttattatcaattaattac-acaattttaatgcattaactactatataatttcctttt 961054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 802 - 928
Target Start/End: Original strand, 11115106 - 11115236
Alignment:
Q  802 ctaaccggtgccccggg-cattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttt-gactttattatgaattaattaccacat 895  Q
    |||||||||| |||||| || ||||| |||||| |||||||||||    |||||||||||| ||||| |||| ||  ||||||| |||||||||| |||     
T  11115106 ctaaccggtgtcccggggcactggttaaacatatcataaaagggaattattaccataaaagaaaactatttttga--ttattataaattaattac-acaa 11115202  T
Q  896 tttccatgtat-aactactatataatttcctttt 928  Q
    |||| |||||| ||||| ||||||||||||||||    
T  11115203 tttcaatgtattaactattatataatttcctttt 11115236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 830 - 890
Target Start/End: Complemental strand, 5323548 - 5323483
Alignment:
Q  830 cataccataaaaggga----ttaccataaaaggaaactgtttt-gactttattatgaattaattac 890  Q
    ||||||||||||||||    |||||||||||||||| |||||| ||||||||||| ||||||||||    
T  5323548 cataccataaaagggaattattaccataaaaggaaattgtttttgactttattataaattaattac 5323483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 845 - 935
Target Start/End: Original strand, 34851906 - 34851997
Alignment:
Q  845 attaccataaaaggaaactgtttt-gactttattatgaattaattaccacattttccatgtat-aactactatataatttccttttccatatc 935  Q
    ||||| ||||||||||| | |||| ||||||||||| ||| |||||| ||| |||| ||| || |||||||||||||||||||||| ||||||    
T  34851906 attactataaaaggaaattatttttgactttattataaatcaattac-acaatttcaatgcattaactactatataatttcctttttcatatc 34851997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 816 - 890
Target Start/End: Original strand, 1840271 - 1840350
Alignment:
Q  816 gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactg-ttttgactttattatgaattaattac 890  Q
    ||||| ||||| |||||| |||||||||||    ||||||| ||||||||||| |||| |||||||||| ||||||||||    
T  1840271 gggcactggttaaacatatcataaaagggaattattaccatgaaaggaaactgtttttaactttattataaattaattac 1840350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 7e-24; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 789 - 968
Target Start/End: Original strand, 34650828 - 34651018
Alignment:
Q  789 aatttgggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactg-ttttgactttattatga 881  Q
    |||| ||||| ||||||||||||||||  ||||| ||||| | ||||||||||||||||    ||||||||||||||||||| ||||||| ||||||| |    
T  34650828 aattagggtcctgctaaccggtgcccccggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgacattattataa 34650927  T
Q  882 attaattaccacattttccatgta-taactactatataatttccttttccatatcat--accagtgcccggag--accggtaagcatttccc 968  Q
    |||||||| |||| |||| ||| | ||||||||||||||||||||||| |||| | |  |||||||||||| |  |||||| ||||||||||    
T  34650928 attaatta-cacaatttcaatgcattaactactatataatttcctttttcatacccttaaccagtgcccgggggcaccggttagcatttccc 34651018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 794 - 935
Target Start/End: Complemental strand, 35132707 - 35132560
Alignment:
Q  794 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttt-gactttattatgaattaa 886  Q
    ||||| ||||||||||||||||  ||||||||||| | ||||||||||||| ||    |||||||||| | |||||||||| ||||||||||| ||||||    
T  35132707 gggtcctgctaaccggtgcccccggggcattggttaagcataccataaaagagaattattaccataaa-gaaaactgtttttgactttattataaattaa 35132609  T
Q  887 ttaccacattttccatgtat-aactactatataatttccttttccatatc 935  Q
    |||| ||| |||| |||||| |||||||||||||||||||||| ||||||    
T  35132608 ttac-acaatttcaatgtattaactactatataatttcctttttcatatc 35132560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 794 - 928
Target Start/End: Original strand, 11957967 - 11958108
Alignment:
Q  794 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactg-ttttgactttattatgaattaa 886  Q
    ||||| ||||||||||||||||  ||||| ||||| | ||| ||||||||||||    ||||||||||||||||||| ||||||||||||||| ||||||    
T  11957967 gggtcctgctaaccggtgcccctggggcactggttaagcatgccataaaagggaattattaccataaaaggaaactgtttttgactttattatcaattaa 11958066  T
Q  887 ttaccacattttccatgta-taactactatataatttcctttt 928  Q
    ||| |||| ||||  || | |||||||||||||||||||||||    
T  11958067 tta-cacaatttcattgcattaactactatataatttcctttt 11958108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 794 - 935
Target Start/End: Complemental strand, 13661994 - 13661846
Alignment:
Q  794 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgttt-tgactttattatgaattaa 886  Q
    ||||| |||||||||||||| |  |||||  |||| | ||||||||||||| ||    |||||||||||||||||||||| |||||||||||| ||||||    
T  13661994 gggtcctgctaaccggtgcctccggggcacgggttaagcataccataaaagagaattattaccataaaaggaaactgtttctgactttattatcaattaa 13661895  T
Q  887 ttaccacattttccatgtat-aactactatataatttccttttccatatc 935  Q
    |||| ||| |||| ||| || |||||||||||||||||||||| ||||||    
T  13661894 ttac-acaatttcaatgcattaactactatataatttcctttttcatatc 13661846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 793 - 933
Target Start/End: Original strand, 10054352 - 10054498
Alignment:
Q  793 tgggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgttttgactttattatgaattaa 886  Q
    |||||| ||||||||||| ||||  |||||  |||| |||||||||||||| |||    |||||||||||||||||||||||||| ||||||| ||||||    
T  10054352 tgggtcctgctaaccggtacccccggggcacgggttaaacataccataaaaaggaattattaccataaaaggaaactgttttgacattattataaattaa 10054451  T
Q  887 ttaccacattttccatgta-taactactatataatttccttttccata 933  Q
    ||| |||| |||| ||| | ||| || |||||||||||||||| ||||    
T  10054452 tta-cacaatttcaatgcattaattattatataatttcctttttcata 10054498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 845 - 928
Target Start/End: Complemental strand, 11846201 - 11846117
Alignment:
Q  845 attaccataaaaggaaactg-ttttgactttattatgaattaattaccacattttccatgtat-aactactatataatttcctttt 928  Q
    |||||||||||||||||||  ||||||||||||||| |||||||||| ||| |||| |||||| ||||||||||||||||||||||    
T  11846201 attaccataaaaggaaactacttttgactttattataaattaattac-acaatttcaatgtattaactactatataatttcctttt 11846117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 793 - 934
Target Start/End: Original strand, 9721607 - 9721754
Alignment:
Q  793 tgggtcatgctaaccggtgccccgg-gcattggttgaacataccataaaaggg----attaccataaaaggaaactg-ttttgactttattatgaattaa 886  Q
    |||||||||||||||||||||| || ||||   || |||||||||||||||||    |||| |||||||| |||||| ||||||||||||||| ||||||    
T  9721607 tgggtcatgctaaccggtgccctggtgcatgaattaaacataccataaaagggaattattatcataaaagaaaactgtttttgactttattataaattaa 9721706  T
Q  887 ttaccacattttccatgta-taactactatataatttccttttccatat 934  Q
    |||  ||| |||| ||| | ||| ||||||||||||||||||| |||||    
T  9721707 tta-aacaatttcaatgcattaattactatataatttcctttttcatat 9721754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 847 - 935
Target Start/End: Original strand, 19647717 - 19647806
Alignment:
Q  847 taccataaaaggaaactgttt-tgactttattatgaattaattaccacattttccatgtat-aactactatataatttccttttccatatc 935  Q
    ||||||||||||||||||||| |||||||||||| |||||||||  ||| |||| ||| || |||||||||||||||||||||| ||||||    
T  19647717 taccataaaaggaaactgtttatgactttattatcaattaattat-acaatttcaatgcattaactactatataatttcctttttcatatc 19647806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 794 - 933
Target Start/End: Original strand, 35504241 - 35504386
Alignment:
Q  794 gggtcatgctaaccggtgccccggg-cattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttt-gactttattatgaattaat 887  Q
    ||||| |||||||||||||||| || ||  |||| | ||||||||||||||||    || |||||||||| ||||||||| ||| ||||||| |||||||    
T  35504241 gggtcctgctaaccggtgcccccggacacgggttaagcataccataaaagggaattattgccataaaagggaactgtttttgacattattataaattaat 35504340  T
Q  888 taccacattttccatgtat-aactactatataatttccttttccata 933  Q
    ||| ||| |||| ||| || |||||||||||||||||||||| ||||    
T  35504341 tac-acaatttcaatgcattaactactatataatttcctttttcata 35504386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 845 - 933
Target Start/End: Complemental strand, 12506425 - 12506336
Alignment:
Q  845 attaccataaaaggaaactgtttt-gactttattatgaattaattaccacattttccatgtat-aactactatataatttccttttccata 933  Q
    ||||| |||||||||||||||||| ||| ||||||| |||||||||| ||| |||| ||| || |||||||||||||||||||||| ||||    
T  12506425 attactataaaaggaaactgtttttgacattattataaattaattac-acaatttcaatgcattaactactatataatttcctttttcata 12506336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 794 - 928
Target Start/End: Original strand, 40564404 - 40564545
Alignment:
Q  794 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttt-gactttattatgaattaa 886  Q
    ||||| |||||||||||||||   ||| ||||||| | ||||||||||||| ||    |||||||||||  ||| |||||| ||||||||||| ||||||    
T  40564404 gggtcctgctaaccggtgcccttggggtattggttaagcataccataaaagagaattattaccataaaaaaaaattgtttttgactttattataaattaa 40564503  T
Q  887 ttaccacattttccatgtat-aactactatataatttcctttt 928  Q
    |||| ||| |||| ||| || ||||||||||||||||||||||    
T  40564504 ttac-acaatttcaatgcattaactactatataatttcctttt 40564545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 845 - 935
Target Start/End: Complemental strand, 13470280 - 13470189
Alignment:
Q  845 attaccataaaaggaaactg-ttttgactttattatgaattaattaccacattttccatgta-taactactatataatttccttttccatatc 935  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||  ||| |||| ||| | | |||||||||| |||||||||| ||||||    
T  13470280 attaccataaaaggaaactgtttttgactttattataaattaatta-tacaatttcaatgcattgactactatattatttcctttttcatatc 13470189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 794 - 933
Target Start/End: Complemental strand, 8787525 - 8787379
Alignment:
Q  794 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttt-gactttattatgaattaa 886  Q
    ||||| ||||||||||||||||  |||||  |||| | |||||||||||| |||    ||| ||||||||||||||||||| ||  ||||||| ||||||    
T  8787525 gggtcctgctaaccggtgcccccggggcacaggttaagcataccataaaatggaattattatcataaaaggaaactgtttttgatattattataaattaa 8787426  T
Q  887 ttaccacattttccatgtat-aactactatataatttccttttccata 933  Q
    |||| ||| |||| ||| || ||||||||||||||||| |||| ||||    
T  8787425 ttac-acaatttcaatgcattaactactatataatttcatttttcata 8787379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 847 - 935
Target Start/End: Complemental strand, 10070095 - 10070007
Alignment:
Q  847 taccataaaaggaaactgtttt-gactttattatgaattaattaccacattttccatgtat-aactactatataatttccttttccatatc 935  Q
    |||||||||| ||||||||||| ||||||||||| | |||||||| ||| |||| ||| || |||||||||||||||||||||| ||||||    
T  10070095 taccataaaaagaaactgtttttgactttattatca-ttaattac-acaatttcaatgcattaactactatataatttcctttttcatatc 10070007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 852 - 928
Target Start/End: Original strand, 21547458 - 21547535
Alignment:
Q  852 taaaaggaaactgtttt-gactttattatgaattaattaccacattttccatgtat-aactactatataatttcctttt 928  Q
    ||||| ||||||||||| ||||||||||| |||||||||| ||| |||| ||| || ||||||||||||||||||||||    
T  21547458 taaaatgaaactgtttttgactttattataaattaattac-acaatttcaatgcattaactactatataatttcctttt 21547535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 866 - 934
Target Start/End: Complemental strand, 4837364 - 4837296
Alignment:
Q  866 tttgactttattatgaattaattaccacattttccatgtat-aactactatataatttccttttccatat 934  Q
    |||||||||||||| |||||||||| ||| |||| ||| || || ||||||||||||||||||| |||||    
T  4837364 tttgactttattataaattaattac-acaatttcaatgcattaattactatataatttcctttttcatat 4837296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 845 - 928
Target Start/End: Complemental strand, 20175356 - 20175272
Alignment:
Q  845 attaccataaaaggaaactgtttt-gactttattatgaattaattaccacattttccatgta-taactactatataatttcctttt 928  Q
    |||| |||||||| ||| |||||| ||||||||||| ||||||||| |||| |||| ||| | |||||||||||||||||| ||||    
T  20175356 attatcataaaagaaaattgtttttgactttattataaattaatta-cacaatttcaatgcattaactactatataatttcttttt 20175272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 5e-22; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 793 - 933
Target Start/End: Complemental strand, 43944693 - 43944547
Alignment:
Q  793 tgggtcatgctaaccggtgccc-cgggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttt-gactttattatgaattaa 886  Q
    |||||| ||||||||||||||| |||||| ||||| | ||||||||| ||||||    ||||||||||||||||||||||| ||| ||||||| ||||||    
T  43944693 tgggtcttgctaaccggtgccctcgggcactggttaagcataccatacaagggaattattaccataaaaggaaactgtttttgacattattataaattaa 43944594  T
Q  887 ttaccacattttccatgtat-aactactatataatttccttttccata 933  Q
    |||| ||| |||| ||| || |||||||||||||||||||||| ||||    
T  43944593 ttac-acaatttcaatgcattaactactatataatttcctttttcata 43944547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 794 - 934
Target Start/End: Complemental strand, 36395285 - 36395138
Alignment:
Q  794 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactg-ttttgactttattatgaattaa 886  Q
    ||||| ||||||| ||||||||  ||||| ||||| | ||||||||||||||||    ||| |||||||| |||||| ||||||||||||||| ||||||    
T  36395285 gggtcctgctaactggtgcccccagggcactggttaagcataccataaaagggaattattatcataaaagaaaactgcttttgactttattataaattaa 36395186  T
Q  887 ttaccacattttccatgtat-aactactatataatttccttttccatat 934  Q
    |||| ||| |||| ||| || |||||||||||||||||||||| |||||    
T  36395185 ttac-acaatttcaatgcattaactactatataatttcctttttcatat 36395138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 794 - 933
Target Start/End: Complemental strand, 4089328 - 4089182
Alignment:
Q  794 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactg-ttttgactttattatgaattaa 886  Q
    ||||| ||||||| ||||||||  ||||| ||||| ||||||||||||||| ||    ||||||||||||||||||| ||||||| ||||||| ||||||    
T  4089328 gggtcctgctaactggtgcccctggggcactggttaaacataccataaaagagaattattaccataaaaggaaactgtttttgacattattataaattaa 4089229  T
Q  887 ttaccacattttccatgta-taactactatataatttccttttccata 933  Q
    ||| |||| |||| ||| | ||||||||||||||||| ||||| ||||    
T  4089228 tta-cacaatttcaatgcattaactactatataattttctttttcata 4089182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 801 - 934
Target Start/End: Complemental strand, 50619264 - 50619125
Alignment:
Q  801 gctaaccggtgcccc-gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactg-ttttgactttattatgaattaattaccaca 894  Q
    ||||||||||||||| ||||| ||||| | ||||||||||||||||    ||||||||||||||||||| |||| |||||||||| |||||| || ||||    
T  50619264 gctaaccggtgcccctgggcactggttaagcataccataaaagggaattattaccataaaaggaaactgttttttactttattataaattaagta-caca 50619166  T
Q  895 ttttccatgta-taactactatataatttccttttccatat 934  Q
     |||| ||| | ||||||||||||||||| ||||| |||||    
T  50619165 atttcaatgcattaactactatataattttctttttcatat 50619125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 793 - 935
Target Start/End: Complemental strand, 12356431 - 12356282
Alignment:
Q  793 tgggtcatgctaaccggtgccccggg--cattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttt-gactttattatgaatta 885  Q
    |||||| |||||||||||||||| ||  || ||||| | ||||||||||||| ||    ||| ||||||||||||||||||| ||||||||||| |||||    
T  12356431 tgggtcctgctaaccggtgcccccggaacactggttaagcataccataaaagagaattattatcataaaaggaaactgtttttgactttattataaatta 12356332  T
Q  886 attaccacattttccatgtat-aactactatataatttccttttccatatc 935  Q
    ||||  | | |||| |||||| |||||||||||||||||||||| ||||||    
T  12356331 attat-ataatttcaatgtattaactactatataatttcctttttcatatc 12356282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 830 - 935
Target Start/End: Original strand, 19503143 - 19503253
Alignment:
Q  830 cataccataaaaggga----ttaccataaaaggaaactgtttt-gactttattatgaattaattaccacattttccatgta-taactactatataatttc 923  Q
    ||||||||||||||||    |||| |||||||||||||||||| ||||||||||| ||||||||| |||| |||| ||||| |||||| |||||||||||    
T  19503143 cataccataaaagggaattattacaataaaaggaaactgtttttgactttattataaattaatta-cacaatttcaatgtattaactagtatataatttc 19503241  T
Q  924 cttttccatatc 935  Q
    ||||| ||||||    
T  19503242 ctttttcatatc 19503253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 791 - 933
Target Start/End: Original strand, 789527 - 789676
Alignment:
Q  791 tttgggtcatgctaaccggtgcccc-gggc-attggttgaacataccataaaaggga----ttaccataaaaggaaactg-ttttgactttattatgaat 883  Q
    ||||||||  ||||||||||||| | |||| | ||||| | ||||||||||||||||    ||||||||||||||||||| ||||||| ||||||| |||    
T  789527 tttgggtcccgctaaccggtgcctctgggctactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgacattattataaat 789626  T
Q  884 taattaccacattttccatgta-taactactatataatttccttttccata 933  Q
    |||||| |||| |||| ||| | ||||||||||||||||||||||| ||||    
T  789627 taatta-cacaatttcaatgcattaactactatataatttcctttttcata 789676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 785 - 926
Target Start/End: Complemental strand, 29591384 - 29591236
Alignment:
Q  785 ttttaatttgggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaagg----gattaccataaaaggaaactg-ttttgactttatt 877  Q
    |||||||  ||||| ||||||||||||||||  ||||| | ||| | ||||||||||||||     |||||||||||||||||||| |||||||||||||    
T  29591384 ttttaataagggtcctgctaaccggtgcccccggggcactagttaagcataccataaaaggtaattattaccataaaaggaaactgtttttgactttatt 29591285  T
Q  878 atgaattaattaccacattttccatgta-taactactatataatttcctt 926  Q
    || |||||| || |||| |||| ||| | |||||||||||||||||||||    
T  29591284 ataaattaagta-cacaatttcaatgcattaactactatataatttcctt 29591236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 793 - 927
Target Start/End: Complemental strand, 54897495 - 54897354
Alignment:
Q  793 tgggtcatgctaaccggtgcc-ccggg-cattggttgaacataccataaaagg----gattaccataaaaggaaactg-ttttgactttattatgaatta 885  Q
    |||||| |||||||||||||| ||||| || ||||| ||||||||||||||||     ||||||||||||||||| || ||||||||||||||| |||||    
T  54897495 tgggtcctgctaaccggtgcctccgggacactggttaaacataccataaaaggaaattattaccataaaaggaaattgtttttgactttattataaatta 54897396  T
Q  886 attaccacattttccatgta-taactactatataatttccttt 927  Q
    ||||  ||| |||| ||| | ||||||||||||||||||||||    
T  54897395 atta-tacaatttcaatgcattaactactatataatttccttt 54897354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 794 - 933
Target Start/End: Complemental strand, 16536234 - 16536088
Alignment:
Q  794 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttt-gactttattatgaattaa 886  Q
    ||||| ||||||||||||||||  ||||| ||||| |  |||||||||||  ||    ||||||||||||||||||||||| ||| ||||||| ||||||    
T  16536234 gggtcctgctaaccggtgcccccggggcactggttaagaataccataaaatagaattattaccataaaaggaaactgtttttgacattattataaattaa 16536135  T
Q  887 ttaccacattttccatgtat-aactactatataatttccttttccata 933  Q
    |||| ||| |||| ||| || |||||||||||||||||||||| ||||    
T  16536134 ttac-acaatttcaatgcattaactactatataatttcctttttcata 16536088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 845 - 968
Target Start/End: Complemental strand, 28755749 - 28755621
Alignment:
Q  845 attaccataaaaggaaactgttt-tgactttattatgaattaattaccacattttccatgtat-aactactatataatttccttttccatatcat--acc 940  Q
    |||| |||||||||||||||||| | |||||||||| |||||||||| ||| |||| ||| || |||||||||||||||||||||| |||||| |  |||    
T  28755749 attatcataaaaggaaactgtttctaactttattatcaattaattac-acaatttcaatgcattaactactatataatttcctttttcatatccttaacc 28755651  T
Q  941 agtgccc--ggagaccggtaagcatttccc 968  Q
    |||||||  ||| |||||| ||||||||||    
T  28755650 agtgccctgggacaccggttagcatttccc 28755621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 845 - 933
Target Start/End: Complemental strand, 15186372 - 15186283
Alignment:
Q  845 attaccataaaaggaaactgtttt-gactttattatgaattaattaccacattttccatgtat-aactactatataatttccttttccata 933  Q
    |||||||||||||||||||||||| ||| ||||||| |||||||||| ||| |||| ||| || |||||||||||||||||||||| ||||    
T  15186372 attaccataaaaggaaactgtttttgacattattataaattaattac-acaatttcaatggattaactactatataatttcctttttcata 15186283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 845 - 928
Target Start/End: Original strand, 32202537 - 32202621
Alignment:
Q  845 attaccataaaaggaaactgtttt-gactttattatgaattaattaccacattttccatgtat-aactactatataatttcctttt 928  Q
    |||| ||||||||||||||||||| ||||||||||| |||||||||| ||| |||| ||| || ||||||||||||||||||||||    
T  32202537 attatcataaaaggaaactgtttttgactttattataaattaattac-acaatttcaatgcattaactactatataatttcctttt 32202621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 793 - 933
Target Start/End: Original strand, 4268821 - 4268968
Alignment:
Q  793 tgggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactg-ttttgactttattatgaatta 885  Q
    |||||| |||||||||||||||   ||||| ||||| | ||||||||||||||||    ||||||||||| ||||||| ||||||| ||||||| |||||    
T  4268821 tgggtcctgctaaccggtgccctcggggcactggttaatcataccataaaagggaattattaccataaaaagaaactgtttttgacattattataaatta 4268920  T
Q  886 attaccacattttccatgta-taactactatataatttccttttccata 933  Q
    |||| || | |||| ||| | ||||||||||||| ||||||||| ||||    
T  4268921 atta-cataatttcaatgcattaactactatatagtttcctttttcata 4268968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 845 - 923
Target Start/End: Original strand, 30387191 - 30387270
Alignment:
Q  845 attaccataaaaggaaactg-ttttgactttattatgaattaattaccacattttccatgta-taactactatataatttc 923  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||| |||| |||| ||| | ||||||||||||||||||    
T  30387191 attaccataaaaggaaactgtttttgactttattataaattaatta-cacaatttcaatgcattaactactatataatttc 30387270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 845 - 935
Target Start/End: Complemental strand, 39844036 - 39843945
Alignment:
Q  845 attaccataaaaggaaactg-ttttgactttattatgaattaattaccacattttccatgta-taactactatataatttccttttccatatc 935  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||| || | |||| ||| | |||||||||||||||||| |||| ||||||    
T  39844036 attaccataaaaggaaactgtttttgactttattataaattaatta-cataatttcaatgcattaactactatataatttcatttttcatatc 39843945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 823 - 934
Target Start/End: Original strand, 52533816 - 52533932
Alignment:
Q  823 ggttgaacataccataaaaggga----ttaccataaaaggaaactgtttt-gactttattatgaattaattaccacattttccatgta-taactactata 916  Q
    |||| ||||||||||||||||||    ||||||||||||||||||||||| ||||||||||| |||||||||   || ||||  || | |||||||||||    
T  52533816 ggttaaacataccataaaagggaattattaccataaaaggaaactgttttcgactttattatcaattaatta-ttcaatttcagtgcattaactactata 52533914  T
Q  917 taatttccttttccatat 934  Q
    |||||||||||| |||||    
T  52533915 taatttcctttttcatat 52533932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 794 - 933
Target Start/End: Original strand, 18067879 - 18068025
Alignment:
Q  794 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttt-gactttattatgaattaa 886  Q
    ||||| ||||||||||||||||  ||| |  |||| ||||||||||||||||||    |||||||||||||||||| |||| ||| |||| || ||||||    
T  18067879 gggtcttgctaaccggtgcccccggggaacgggttaaacataccataaaagggaattattaccataaaaggaaactatttttgacattatgataaattaa 18067978  T
Q  887 ttaccacattttccatgtat-aactactatataatttccttttccata 933  Q
    |||| ||| |||  ||| || |||||||||||||||||||||| ||||    
T  18067979 ttac-acaattttaatgcattaactactatataatttcctttttcata 18068025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 794 - 947
Target Start/End: Original strand, 33108673 - 33108834
Alignment:
Q  794 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactg-ttttgactttattatgaattaa 886  Q
    ||||| |||||||||||||| |  |||||  |||| | |||||||||||| |||    ||||||||||||||||||| ||||||||||||||| ||||||    
T  33108673 gggtcctgctaaccggtgcctccggggcacgggttaagcataccataaaaaggaattattaccataaaaggaaactgtttttgactttattatcaattaa 33108772  T
Q  887 ttaccacattttccatgta-taactactatataatttccttttccatatcat-accagtgccc 947  Q
    |||  ||  |||| ||| | |||||| |||||||||||||||| |||||| | ||||||||||    
T  33108773 tta-tactatttcaatgcattaactattatataatttcctttttcatatcttaaccagtgccc 33108834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 820 - 890
Target Start/End: Original strand, 47231900 - 47231975
Alignment:
Q  820 attggttgaacataccataaaaggg----attaccataaaaggaaactg-ttttgactttattatgaattaattac 890  Q
    ||||||| |||||||||||||||||    |||| ||||||||||||||| ||||||||||||||| ||||||||||    
T  47231900 attggttaaacataccataaaagggaattattatcataaaaggaaactgtttttgactttattatcaattaattac 47231975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 794 - 933
Target Start/End: Original strand, 43202384 - 43202529
Alignment:
Q  794 gggtcatgctaaccggtgcccc-gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttt-gactttattatgaattaat 887  Q
    ||||| |||||||||||||||| ||||| ||||| | | ||||||||||| ||    |||||||||||| |||||||||| ||| ||||||| |||||||    
T  43202384 gggtcctgctaaccggtgcccccgggcactggttaagcttaccataaaagagaattattaccataaaagaaaactgtttttgacattattataaattaat 43202483  T
Q  888 taccacattttccatgtat-aactactatataatttccttttccata 933  Q
    ||| ||| |||  ||| || || ||||||||||||||||||| ||||    
T  43202484 tac-acaattttaatgcattaattactatataatttcctttttcata 43202529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 822 - 934
Target Start/End: Complemental strand, 46149095 - 46148978
Alignment:
Q  822 tggttgaacataccataaaaggga----ttaccataaaaggaaactgtttt-gactttattatgaattaattaccacattttccatgta-taactactat 915  Q
    ||||| ||||||||||||||| ||    ||||||||||| |||| |||||| ||||||||||| ||||||||| |||| |||| ||||| ||| || |||    
T  46149095 tggttaaacataccataaaagagaattattaccataaaaagaaattgtttttgactttattataaattaatta-cacaatttcaatgtattaattattat 46148997  T
Q  916 ataatttccttttccatat 934  Q
    ||||||||||||| |||||    
T  46148996 ataatttcctttttcatat 46148978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 793 - 890
Target Start/End: Original strand, 5091611 - 5091713
Alignment:
Q  793 tgggtcatgctaaccggtgc-cccgggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgttt-tgactttattatgaattaa 886  Q
    |||||| ||||||||||||| ||||| || ||||| | ||||| ||||||||||    |||| ||||||||||||||||| |||||||||||| ||||||    
T  5091611 tgggtcctgctaaccggtgctcccggacactggttaagcatac-ataaaagggaattattactataaaaggaaactgtttatgactttattataaattaa 5091709  T
Q  887 ttac 890  Q
    ||||    
T  5091710 ttac 5091713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 845 - 933
Target Start/End: Complemental strand, 7769067 - 7768978
Alignment:
Q  845 attaccataaaaggaaactgttttga-ctttattatgaattaattaccacattttccatgtat-aactactatataatttccttttccata 933  Q
    |||||||||||||||||||||||| | | ||||||| |||||||||| ||| |||| ||  || |||||||||||||||||||||| ||||    
T  7769067 attaccataaaaggaaactgtttttaacattattataaattaattac-acaatttcaatacattaactactatataatttcctttttcata 7768978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 847 - 927
Target Start/End: Original strand, 46688264 - 46688345
Alignment:
Q  847 taccataaaaggaaactg-ttttgactttattatgaattaattaccacattttccatgta-taactactatataatttccttt 927  Q
    |||||||||||||||||| ||||||||||||||| ||||||||| |||| |||| ||| | |||||||| |||||||| ||||    
T  46688264 taccataaaaggaaactgcttttgactttattataaattaatta-cacaatttcaatgcattaactactgtataattttcttt 46688345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 830 - 934
Target Start/End: Original strand, 3783539 - 3783648
Alignment:
Q  830 cataccataaaaggga----ttaccataaaaggaaactgtttt-gactttattatgaattaattaccacattttccatgta-taactactatataatttc 923  Q
    ||||||||||||||||    |||||||||||| |||||||||| ||||||||||| |||||||||  ||| |||  ||| | ||||||||||||||||||    
T  3783539 cataccataaaagggaattattaccataaaagaaaactgtttttgactttattatcaattaatta-aacaattttaatgcattaactactatataatttc 3783637  T
Q  924 cttttccatat 934  Q
     |||| |||||    
T  3783638 atttttcatat 3783648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 845 - 928
Target Start/End: Complemental strand, 6164222 - 6164138
Alignment:
Q  845 attaccataaaaggaaactg-ttttgactttattatgaattaattaccacattttccatgta-taactactatataatttcctttt 928  Q
    |||||||||||||||||||| ||||  ||||||||| ||||||||| |||| |||| ||| | ||||||||||||||||| |||||    
T  6164222 attaccataaaaggaaactgttttttgctttattataaattaatta-cacaatttcaatgcattaactactatataattttctttt 6164138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 865 - 928
Target Start/End: Complemental strand, 32217153 - 32217090
Alignment:
Q  865 ttttgactttattatgaattaattaccacattttccatgtat-aactactatataatttcctttt 928  Q
    ||||||||||||||| |||||||||| ||| |||| ||| || ||||||||||||||||||||||    
T  32217153 ttttgactttattataaattaattac-acaatttcaatgcattaactactatataatttcctttt 32217090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 865 - 928
Target Start/End: Original strand, 42898824 - 42898887
Alignment:
Q  865 ttttgactttattatgaattaattaccacattttccatgtat-aactactatataatttcctttt 928  Q
    ||||||||||||||| |||||||||| ||| |||| ||| || ||||||||||||||||||||||    
T  42898824 ttttgactttattataaattaattac-acaatttcaatgcattaactactatataatttcctttt 42898887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 865 - 935
Target Start/End: Complemental strand, 4220303 - 4220233
Alignment:
Q  865 ttttgactttattatgaattaattaccacattttccatgtat-aactactatataatttccttttccatatc 935  Q
    ||||||||||||||| |||||||||| ||| |||| ||  || |||||||||||||||||||||| ||||||    
T  4220303 ttttgactttattataaattaattac-acaatttcaatacattaactactatataatttcctttttcatatc 4220233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 794 - 890
Target Start/End: Complemental strand, 16821038 - 16820935
Alignment:
Q  794 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaagg----gattaccataaaaggaaactg-ttttgactttattatgaattaa 886  Q
    ||||| ||||||||||||||||  ||||| ||||| | ||||||||||||||     ||||||||||||||||||||  | |||||||||||| | ||||    
T  16821038 gggtcctgctaaccggtgcccccggggcactggttaagcataccataaaaggaaattattaccataaaaggaaactgcgtatgactttattataagttaa 16820939  T
Q  887 ttac 890  Q
    ||||    
T  16820938 ttac 16820935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 845 - 933
Target Start/End: Complemental strand, 37988064 - 37987975
Alignment:
Q  845 attaccataaaaggaaactgttttga-ctttattatgaattaattaccacattttccatgtat-aactactatataatttccttttccata 933  Q
    ||||| |||||||||||||||||| | | ||||||| |||||||||| ||| |||| ||  || |||||||||||||||||||||| ||||    
T  37988064 attacaataaaaggaaactgtttttaacattattataaattaattac-acaatttcaatacattaactactatataatttcctttttcata 37987975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 847 - 935
Target Start/End: Complemental strand, 54054675 - 54054586
Alignment:
Q  847 taccataaaaggaaactgtttt-gactttattatgaattaattaccacattttccatgta-taactactatataatttccttttccatatc 935  Q
    ||||||||||||||| |||||| ||||||||||| ||||||||| |||  |||| ||| | |||||| ||||||||||| |||| ||||||    
T  54054675 taccataaaaggaaattgtttttgactttattatcaattaatta-cactatttcaatgcattaactattatataatttcttttttcatatc 54054586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 847 - 935
Target Start/End: Original strand, 54945837 - 54945926
Alignment:
Q  847 taccataaaaggaaactgtttt-gactttattatgaattaattaccacattttccatgta-taactactatataatttccttttccatatc 935  Q
    |||||||||| |||| |||||| ||||||||||| ||||||||| |||| |||| ||  | ||||| ||||||||||||||||| ||||||    
T  54945837 taccataaaacgaaattgtttttgactttattataaattaatta-cacaatttcaatacattaactgctatataatttcctttttcatatc 54945926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 846 - 922
Target Start/End: Complemental strand, 55882811 - 55882734
Alignment:
Q  846 ttaccataaaaggaaactgtttt-gactttattatgaattaattaccacattttccatgta-taactactatataattt 922  Q
    |||||||||||| |||||||||| ||||||||||| ||||||||| |||| |||| ||| | ||| |||||||||||||    
T  55882811 ttaccataaaagaaaactgtttttgactttattataaattaatta-cacaatttcaatgcattaattactatataattt 55882734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 845 - 889
Target Start/End: Original strand, 31680520 - 31680565
Alignment:
Q  845 attaccataaaaggaaactgtttt-gactttattatgaattaatta 889  Q
    ||||||||||||||||| |||||| ||||||||||| |||||||||    
T  31680520 attaccataaaaggaaattgtttttgactttattataaattaatta 31680565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 5e-22; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 794 - 973
Target Start/End: Original strand, 17333284 - 17333472
Alignment:
Q  794 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttt-gactttattatgaattaa 886  Q
    ||||| |||||||||||||| |  ||||||||||| |   ||||||||||||||    ||| ||||||||||||||||||| ||||||||||||||||||    
T  17333284 gggtcctgctaaccggtgcctccggggcattggttaag--taccataaaagggaagtattatcataaaaggaaactgtttttgactttattatgaattaa 17333381  T
Q  887 ttaccacattttccatgta-taactactatataatttccttttccatatcat--accagtgcccggag--accggtaagcatttccctttta 973  Q
    ||| |||| |||| ||| | ||||||||||||||||||||||| |||||| |  |||||||||||| |  |||||| |||||||||| ||||    
T  17333382 tta-cacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccgggggcaccggttagcatttcccattta 17333472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 794 - 935
Target Start/End: Complemental strand, 15227925 - 15227777
Alignment:
Q  794 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactg-ttttgactttattatgaattaa 886  Q
    ||||| |||||||||||||| |  ||||| ||||| | ||||||||||||||||    ||||||||||||||||||| ||||||||||||||| ||||||    
T  15227925 gggtcttgctaaccggtgcctccggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatcaattaa 15227826  T
Q  887 ttaccacattttccatgta-taactactatataatttccttttccatatc 935  Q
    ||| |||| |||| ||| | ||| ||||||||||||||||||| ||||||    
T  15227825 tta-cacaatttcaatgcattaattactatataatttcctttttcatatc 15227777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 794 - 935
Target Start/End: Original strand, 51065748 - 51065896
Alignment:
Q  794 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactg-ttttgactttattatgaattaa 886  Q
    ||||| ||||||||||||||||  ||||| ||||| | ||||||||||||||||    ||||||||||||||||||| ||||||||||||||| ||||||    
T  51065748 gggtcctgctaaccggtgcccctggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattataaattaa 51065847  T
Q  887 ttaccacattttccatgta-taactactatataatttccttttccatatc 935  Q
    ||| |||| |||| ||  | ||||||||||||||||| ||||| ||||||    
T  51065848 tta-cacaatttcaatacattaactactatataatttactttttcatatc 51065896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 794 - 924
Target Start/End: Complemental strand, 5694507 - 5694370
Alignment:
Q  794 gggtcatgctaaccggtgccccggg--cattggttgaacataccataaaaggga----ttaccataaaaggaaactg-ttttgactttattatgaattaa 886  Q
    ||||| |||||||||||||||| ||  || ||||| | ||||||||||||||||    ||||||||||||||||||| ||||||||||||||| ||||||    
T  5694507 gggtcctgctaaccggtgcccccggagcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatcaattaa 5694408  T
Q  887 ttaccacattttccatgta-taactactatataatttcc 924  Q
    ||| |||| |||| ||| | |||||||||||||||||||    
T  5694407 tta-cacaatttcaatgcattaactactatataatttcc 5694370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 794 - 928
Target Start/End: Complemental strand, 29657957 - 29657816
Alignment:
Q  794 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttt-gactttattatgaattaa 886  Q
    ||||| ||||||||||||||||  ||||| ||||| | ||||||||||||||||    |||||| |||||||||||||||| ||||||||||| ||||||    
T  29657957 gggtcctgctaaccggtgcccccagggcactggttaagcataccataaaagggaattattaccaaaaaaggaaactgtttttgactttattatcaattaa 29657858  T
Q  887 ttaccacattttccatgtat-aactactatataatttcctttt 928  Q
    |||  ||| |||| ||| || ||||||||||||||||||||||    
T  29657857 ttat-acaatttcaatgcattaactactatataatttcctttt 29657816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 845 - 935
Target Start/End: Original strand, 9266785 - 9266876
Alignment:
Q  845 attaccataaaaggaaactgtttt-gactttattatgaattaattaccacattttccatgta-taactactatataatttccttttccatatc 935  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||| |||| ||| | ||| ||||||||||||||||||| ||||||    
T  9266785 attaccataaaaggaaactgtttttgactttattatgaattaatta-cacaatttcaatgcattaaatactatataatttcctttttcatatc 9266876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 845 - 935
Target Start/End: Original strand, 19031872 - 19031963
Alignment:
Q  845 attaccataaaaggaaactgtttt-gactttattatgaattaattaccacattttccatgtat-aactactatataatttccttttccatatc 935  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||| ||| |||| |||| | |||||||||||||||||||||| ||||||    
T  19031872 attaccataaaaggaaactgtttttgactttattataaattaattac-acaatttcaatgttttaactactatataatttcctttttcatatc 19031963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 800 - 935
Target Start/End: Original strand, 12072068 - 12072210
Alignment:
Q  800 tgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttt-gactttattatgaattaattacca 892  Q
    ||||||||||||||||  ||||| ||||| | |||||||||||| |||    |||||||||||| |||||||||| ||||||||||| ||||||||| ||    
T  12072068 tgctaaccggtgcccccggggcactggttaagcataccataaaaaggaattattaccataaaagaaaactgtttttgactttattatcaattaatta-ca 12072166  T
Q  893 cattttccatgta-taactactatataatttccttttccatatc 935  Q
    || |||| ||| | ||||||||| ||||||||||||| ||||||    
T  12072167 caatttcaatgcattaactactacataatttcctttttcatatc 12072210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 822 - 928
Target Start/End: Original strand, 36446355 - 36446466
Alignment:
Q  822 tggttgaacataccataaaaggga----ttaccataaaaggaaactgtttt-gactttattatgaattaattaccacattttccatgtat-aactactat 915  Q
    ||||| ||||||||||||||||||    |||| |||||||||||||||||| ||||||||||| |||||||||| ||| |||| ||| || |||||||||    
T  36446355 tggttaaacataccataaaagggaattattactataaaaggaaactgtttttgactttattataaattaattac-acaatttcaatgcattaactactat 36446453  T
Q  916 ataatttcctttt 928  Q
    |||||||||||||    
T  36446454 ataatttcctttt 36446466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 795 - 933
Target Start/End: Complemental strand, 38163035 - 38162890
Alignment:
Q  795 ggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactg-ttttgactttattatgaattaat 887  Q
    |||| ||||||||||||||||  |||||  |||| | ||||||||||||||||    ||||||||||||||||||| ||||||| ||||||| |||||||    
T  38163035 ggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgacattattataaattaat 38162936  T
Q  888 taccacattttccatgta-taactactatataatttccttttccata 933  Q
    || |||| |||| ||| | ||||||||||||||||| ||||| ||||    
T  38162935 ta-cacaatttcaatgcattaactactatataattttctttttcata 38162890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 791 - 890
Target Start/End: Original strand, 48383108 - 48383214
Alignment:
Q  791 tttgggtcatgctaaccggtgccccgg--gcattggttgaacataccataaaaggga----ttaccataaaaggaaactg-ttttgactttattatgaat 883  Q
    |||||||| |||||||| ||||||| |  ||||||||| | ||||||||||||||||    ||||||||||||||||||| ||||||||||||||| |||    
T  48383108 tttgggtcctgctaaccagtgcccctgaggcattggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatcaat 48383207  T
Q  884 taattac 890  Q
    |||||||    
T  48383208 taattac 48383214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 793 - 935
Target Start/End: Original strand, 30294380 - 30294529
Alignment:
Q  793 tgggtcatgctaaccggtg-ccccgg-gcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttt-gactttattatgaatta 885  Q
    |||||| |||||||||||| |||||| |||  |||| | ||||||||||||||||    ||||||||||| ||||||||||| ||| ||||||| |||||    
T  30294380 tgggtcctgctaaccggtgtccccggagcacaggttaagcataccataaaagggaattattaccataaaaagaaactgtttttgacattattataaatta 30294479  T
Q  886 attaccacattttccatgtat-aactactatataatttccttttccatatc 935  Q
    ||||| ||| |||| ||| || |||||||||||||||||||||| ||||||    
T  30294480 attac-acaatttcaatgcattaactactatataatttcctttttcatatc 30294529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 794 - 935
Target Start/End: Complemental strand, 47010179 - 47010031
Alignment:
Q  794 gggtcatgctaaccggtgccccggg--cattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttt-gactttattatgaattaa 886  Q
    ||||| |||||||||||||||| ||  || ||||| | ||||||||||||| ||    ||||||||||||||||||||||| || |||||||| ||||||    
T  47010179 gggtcctgctaaccggtgcccctggagcactggttaagcataccataaaagagaattattaccataaaaggaaactgtttttgaatttattataaattaa 47010080  T
Q  887 ttaccacattttccatgtat-aactactatataatttccttttccatatc 935  Q
    |||| ||| |||| ||  || |||||||||||||||||||||| ||||||    
T  47010079 ttac-acaatttcaatacattaactactatataatttcctttttcatatc 47010031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 791 - 935
Target Start/End: Original strand, 24178460 - 24178611
Alignment:
Q  791 tttgggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactg-ttttgactttattatgaat 883  Q
    ||||||||  |||||||||||||||  ||||| ||||| | |||||||||||| | |    ||||||||||||||||||| |||||||||||||||  ||    
T  24178460 tttgggtccggctaaccggtgcccccggggcactggttaagcataccataaaatgaaattattaccataaaaggaaactgcttttgactttattatagat 24178559  T
Q  884 taattaccacattttccatgtat-aactactatataatttccttttccatatc 935  Q
    ||||||| ||| |||| ||| || ||||| |||||||||||||||| ||||||    
T  24178560 taattac-acaatttcaatgcattaactattatataatttcctttttcatatc 24178611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 845 - 935
Target Start/End: Complemental strand, 48071611 - 48071520
Alignment:
Q  845 attaccataaaaggaaactg-ttttgactttattatgaattaattaccacattttccatgta-taactactatataatttccttttccatatc 935  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||| |||| |||| ||| | |||||| |||||||||||||||| ||||||    
T  48071611 attaccataaaaggaaactgtttttgactttattataaattaatta-cacaatttcaatgcattaactattatataatttccttttacatatc 48071520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 794 - 928
Target Start/End: Complemental strand, 18043348 - 18043207
Alignment:
Q  794 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttt-gactttattatgaattaa 886  Q
    ||||| ||||||||||||||||  ||||| ||||| | ||||||||||||  ||    |||||||||||| |||||||||| ||| ||||||| ||||||    
T  18043348 gggtcctgctaaccggtgcccccggggcactggttaagcataccataaaatagaattattaccataaaagaaaactgtttttgacattattataaattaa 18043249  T
Q  887 ttaccacattttccatgtat-aactactatataatttcctttt 928  Q
    |||| ||| |||| ||| || ||||||||||||||||||||||    
T  18043248 ttac-acaatttcaatgcattaactactatataatttcctttt 18043207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 800 - 947
Target Start/End: Original strand, 42769996 - 42770152
Alignment:
Q  800 tgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactg-ttttgactttattatgaattaattacca 892  Q
    ||||||||||||||||  ||||| ||||| | ||||||||||||  ||    ||||||||||||||||||| ||||||  ||||||| ||||||||| ||    
T  42769996 tgctaaccggtgcccccggggcactggttaagcataccataaaatagaattattaccataaaaggaaactgtttttgatattattataaattaatta-ca 42770094  T
Q  893 cattttccatgta-taactactatataatttccttttccatatcat--accagtgccc 947  Q
    || |||| ||| | ||||||||||||||||||||||| |||| |||  ||||||||||    
T  42770095 caatttcaatgcattaactactatataatttcctttttcataccattaaccagtgccc 42770152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 845 - 928
Target Start/End: Original strand, 35985678 - 35985762
Alignment:
Q  845 attaccataaaaggaaactg-ttttgactttattatgaattaattaccacattttccatgta-taactactatataatttcctttt 928  Q
    |||||||||||||||||||| |||| |||||||||| ||||||||| |||| |||| ||| | |||||||||||||||||||||||    
T  35985678 attaccataaaaggaaactgtttttcactttattataaattaatta-cacaatttcaatgcattaactactatataatttcctttt 35985762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 788 - 890
Target Start/End: Original strand, 45449238 - 45449347
Alignment:
Q  788 taatttgggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaagg----gattaccataaaaggaaactg-ttttgactttattatg 880  Q
    ||||| ||||| ||||||||| ||||||  ||||| ||||| ||||||||||||||||     |||||||||||||||||||| |||||||||||||||     
T  45449238 taattagggtcctgctaaccgatgcccctggggcactggttaaacataccataaaaggcaattattaccataaaaggaaactgcttttgactttattata 45449337  T
Q  881 aattaattac 890  Q
    | ||||||||    
T  45449338 atttaattac 45449347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 845 - 935
Target Start/End: Complemental strand, 3097788 - 3097697
Alignment:
Q  845 attaccataaaaggaaactgtttt-gactttattatgaattaattaccacattttccatgtat-aactactatataatttccttttccatatc 935  Q
    ||||||||||||| |||||||||| ||||||||||| |||||||||| | | |||| ||| || |||||||||||||||||||||| ||||||    
T  3097788 attaccataaaagaaaactgtttttgactttattataaattaattac-ataatttcaatgcattaactactatataatttcctttttcatatc 3097697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 845 - 935
Target Start/End: Original strand, 3784770 - 3784861
Alignment:
Q  845 attaccataaaaggaaactgtttt-gactttattatgaattaattaccacattttccatgtat-aactactatataatttccttttccatatc 935  Q
    ||||||||||||| ||| |||||| ||||||||||| |||||||||| ||| |||| ||| || |||||||||||||||||||||| ||||||    
T  3784770 attaccataaaagaaaattgtttttgactttattatcaattaattac-acaatttcaatgcattaactactatataatttcctttttcatatc 3784861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 847 - 933
Target Start/End: Complemental strand, 29210540 - 29210453
Alignment:
Q  847 taccataaaaggaaactgtttt-gactttattatgaattaattaccacattttccatgtat-aactactatataatttccttttccata 933  Q
    |||||||||||||||||||||| ||| ||||||| |||||||||| ||| |||| ||| || |||||||||||||||||||||| ||||    
T  29210540 taccataaaaggaaactgtttttgacattattataaattaattac-acaatttcaatgcattaactactatataatttcctttttcata 29210453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 845 - 935
Target Start/End: Complemental strand, 45431407 - 45431316
Alignment:
Q  845 attaccataaaaggaaactgtttt-gactttattatgaattaattaccacattttccatgtat-aactactatataatttccttttccatatc 935  Q
    ||||||||||||||||||| |||| ||||||||||| |||||||||| ||| |||| ||  || |||||||||||||||||||||| ||||||    
T  45431407 attaccataaaaggaaactatttttgactttattataaattaattac-acaatttcaatacattaactactatataatttcctttttcatatc 45431316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 845 - 935
Target Start/End: Complemental strand, 6770466 - 6770375
Alignment:
Q  845 attaccataaaaggaaactgtttt-gactttattatgaattaattaccacattttccatgtat-aactactatataatttccttttccatatc 935  Q
    |||| ||||||| ||||||||||| ||||||||||| |||||||||| ||| |||| ||  || |||||||||||||||||||||| ||||||    
T  6770466 attatcataaaatgaaactgtttttgactttattataaattaattac-acaatttcaatacattaactactatataatttcctttttcatatc 6770375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 794 - 933
Target Start/End: Original strand, 38701937 - 38702079
Alignment:
Q  794 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaagggattaccataaaaggaaactg-ttttgactttattatgaattaattac 890  Q
    ||||| |||||||||||||||   ||||| ||||| | |||||||||| |   ||||||||||||| |||||| ||||||| ||||||| |||||||||     
T  38701937 gggtcctgctaaccggtgccctcggggcactggttaagcataccataagaattattaccataaaagaaaactgtttttgacattattataaattaatta- 38702035  T
Q  891 cacattttccatgta-taactactatataatttccttttccata 933  Q
    || | |||| ||| | ||||||||||||| ||||||||| ||||    
T  38702036 cataatttcaatgcattaactactatatagtttcctttttcata 38702079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 845 - 922
Target Start/End: Complemental strand, 13961340 - 13961262
Alignment:
Q  845 attaccataaaaggaaactgtttt-gactttattatgaattaattaccacattttccatgta-taactactatataattt 922  Q
    |||||||||||| ||||||||||| ||||||||||| ||||||||| |||| |||| ||| | |||||||||||||||||    
T  13961340 attaccataaaatgaaactgtttttgactttattatcaattaatta-cacaatttcaatgcattaactactatataattt 13961262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 794 - 933
Target Start/End: Original strand, 14350279 - 14350423
Alignment:
Q  794 gggtcatgctaaccggtgcccc-gggcattggttgaacataccataaaagg---gattaccataaaaggaaactg-ttttgactttattatgaattaatt 888  Q
    ||||| |||||||||||||||| ||||| ||||| | |||||||| || ||    ||||||||||||||||| || ||||||| ||||||| ||||||||    
T  14350279 gggtcctgctaaccggtgccccggggcactggttaagcataccattaagggaattattaccataaaaggaaattgtttttgacattattataaattaatt 14350378  T
Q  889 accacattttccatgta-taactactatataatttccttttccata 933  Q
    | |||| |||  ||| | ||||||| ||||||||||||||| ||||    
T  14350379 a-cacaattttaatgcattaactacaatataatttcctttttcata 14350423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 845 - 937
Target Start/End: Complemental strand, 12307046 - 12306954
Alignment:
Q  845 attaccataaaaggaaactgtttt-gactttattatgaattaattaccacattttccatgta-taactactatataatttccttttccatatcat 937  Q
    |||||||||||||||| ||||||| ||||||||||| ||||||||| |||| |||| ||||| ||||||| ||||||||| ||||| | ||||||    
T  12307046 attaccataaaaggaatctgtttttgactttattataaattaatta-cacaatttcaatgtattaactac-atataattttctttttcgtatcat 12306954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 845 - 889
Target Start/End: Original strand, 14881036 - 14881081
Alignment:
Q  845 attaccataaaaggaaactg-ttttgactttattatgaattaatta 889  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||    
T  14881036 attaccataaaaggaaactgtttttgactttattataaattaatta 14881081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 845 - 935
Target Start/End: Complemental strand, 38335298 - 38335207
Alignment:
Q  845 attaccataaaaggaaactgtttt-gactttattatgaattaattaccacattttccatgtat-aactactatataatttccttttccatatc 935  Q
    |||| |||||||| |||||||||| ||||||||||| |||||||||| ||| || | ||| || || ||||||||||||||||||| ||||||    
T  38335298 attatcataaaagaaaactgtttttgactttattataaattaattac-acaattacaatgcattaattactatataatttcctttttcatatc 38335207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 865 - 935
Target Start/End: Original strand, 15282592 - 15282662
Alignment:
Q  865 ttttgactttattatgaattaattaccacattttccatgta-taactactatataatttccttttccatatc 935  Q
    ||||||||||||||| ||||||||| |||| |||| || || ||||||||||||||||| ||||| ||||||    
T  15282592 ttttgactttattataaattaatta-cacaatttcaatatattaactactatataattttctttttcatatc 15282662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 830 - 889
Target Start/End: Complemental strand, 41730456 - 41730392
Alignment:
Q  830 cataccataaaaggga----ttaccataaaaggaaactgtttt-gactttattatgaattaatta 889  Q
    ||||||||||||||||    ||| ||||||||||||||||||| ||||||||||| |||||||||    
T  41730456 cataccataaaagggaattattatcataaaaggaaactgtttttgactttattataaattaatta 41730392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 789 - 834
Target Start/End: Original strand, 23789491 - 23789537
Alignment:
Q  789 aatttgggtcatgctaaccggtg-ccccgggcattggttgaacatac 834  Q
    ||||||||||||||||||| ||| ||||||||||||||| |||||||    
T  23789491 aatttgggtcatgctaaccagtgcccccgggcattggttaaacatac 23789537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 846 - 927
Target Start/End: Complemental strand, 37503341 - 37503260
Alignment:
Q  846 ttaccataaaaggaaactgttttgactttattatgaattaattaccacattttccatgtat-aactactatataatttccttt 927  Q
    |||||||||||||||| | ||||   ||| |||| |||||||||| ||| |||| |||||| |||||||||||||||||||||    
T  37503341 ttaccataaaaggaaaatatttttgattttttataaattaattac-acaatttcaatgtattaactactatataatttccttt 37503260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 845 - 933
Target Start/End: Original strand, 51368842 - 51368931
Alignment:
Q  845 attaccataaaaggaaactgtttt-gactttattatgaattaattaccacattttccatgtat-aactactatataatttccttttccata 933  Q
    ||||| ||||||||||||| |||| ||| ||||||| |||||| ||| ||| |||| ||| || |||||||||||||||||||||| ||||    
T  51368842 attactataaaaggaaactatttttgacattattataaattaactac-acaatttcaatgcattaactactatataatttcctttttcata 51368931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 50; Significance: 4e-19; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 794 - 935
Target Start/End: Complemental strand, 23147 - 22999
Alignment:
Q  794 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttt-gactttattatgaattaa 886  Q
    ||||| |||||||||||| ||   ||||| ||||| ||||||||||||||| ||    ||| ||||||||||||||||||| ||||||||||| ||||||    
T  23147 gggtcttgctaaccggtgtccttggggcactggttaaacataccataaaagagaattattaacataaaaggaaactgtttttgactttattataaattaa 23048  T
Q  887 ttaccacattttccatgtat-aactactatataatttccttttccatatc 935  Q
    |||| ||| |||| |||||| || ||||||||||||||||||| ||||||    
T  23047 ttac-acaatttcaatgtattaattactatataatttcctttttcatatc 22999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 50; Significance: 4e-19; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 794 - 935
Target Start/End: Original strand, 6110 - 6258
Alignment:
Q  794 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggg----attaccataaaaggaaactg-ttttgactttattatgaattaa 886  Q
    ||||| ||||||||||||||||  |||||  |||| |||||||||||||||||    |||||||||||||||||||| ||||||||||||||| | ||||    
T  6110 gggtcctgctaaccggtgcccccggggcacgggttaaacataccataaaaggggattattaccataaaaggaaactgtttttgactttattataatttaa 6209  T
Q  887 ttaccacattttccatgta-taactactatataatttccttttccatatc 935  Q
    ||| |||| || | ||| | ||||||||||||| ||||||||| ||||||    
T  6210 tta-cacaattccaatgcattaactactatatagtttcctttttcatatc 6258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 50; Significance: 4e-19; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 823 - 935
Target Start/End: Complemental strand, 116359 - 116242
Alignment:
Q  823 ggttgaacataccataaaaggga----ttaccataaaaggaaactgttt-tgactttattatgaattaattaccacattttccatgtat-aactactata 916  Q
    |||| ||||||||||||||||||    ||| |||||||||||||||||| |||||||||||| |||||||||| ||| |||| ||| || ||||||||||    
T  116359 ggttaaacataccataaaagggaattattatcataaaaggaaactgtttctgactttattatcaattaattac-acaatttcaatgcattaactactata 116261  T
Q  917 taatttccttttccatatc 935  Q
    |||||||||||| ||||||    
T  116260 taatttcctttttcatatc 116242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 48; Significance: 7e-18; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 847 - 949
Target Start/End: Original strand, 7956 - 8061
Alignment:
Q  847 taccataaaaggaaactgttt-tgactttattatgaattaattaccacattttccatgtat-aactactatataatttccttttccatatcat--accag 942  Q
    ||||||||||||||||||||| |||||||||||| |||||||||| ||| |||| ||| || |||||||||||||||||||||| |||||| |  |||||    
T  7956 taccataaaaggaaactgtttctgactttattatcaattaattac-acaatttcaatgcattaactactatataatttcctttttcatatccttaaccag 8054  T
Q  943 tgcccgg 949  Q
    |||||||    
T  8055 tgcccgg 8061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0549 (Bit Score: 48; Significance: 7e-18; HSPs: 1)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 847 - 949
Target Start/End: Complemental strand, 7415 - 7310
Alignment:
Q  847 taccataaaaggaaactgttt-tgactttattatgaattaattaccacattttccatgtat-aactactatataatttccttttccatatcat--accag 942  Q
    ||||||||||||||||||||| |||||||||||| |||||||||| ||| |||| ||| || |||||||||||||||||||||| |||||| |  |||||    
T  7415 taccataaaaggaaactgtttctgactttattatcaattaattac-acaatttcaatgcattaactactatataatttcctttttcatatccttaaccag 7317  T
Q  943 tgcccgg 949  Q
    |||||||    
T  7316 tgcccgg 7310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1152 (Bit Score: 46; Significance: 1e-16; HSPs: 1)
Name: scaffold1152
Description:

Target: scaffold1152; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 792 - 935
Target Start/End: Complemental strand, 865 - 716
Alignment:
Q  792 ttgggtcatgctaaccggtgccccgggc-attggttgaacataccataaaagggatt----accataaaaggaaactgtttt-gactttattatgaatta 885  Q
    ||||||| | |||||||||||||||||| ||| ||| | ||||||||||||| || |    |||||||||| |||| ||||| ||||||||||| |||||    
T  865 ttgggtcctactaaccggtgccccgggctattagttaagcataccataaaagagaattatcaccataaaagaaaacagtttttgactttattataaatta 766  T
Q  886 attaccacattttccatgtat-aactactatataatttccttttccatatc 935  Q
    ||||| ||| |||| ||| || |||||||||||||||||||||| ||||||    
T  765 attac-acaatttcaatggattaactactatataatttcctttttcatatc 716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 43; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 823 - 890
Target Start/End: Original strand, 95616 - 95687
Alignment:
Q  823 ggttgaacataccataaaaggga----ttaccataaaaggaaactgttttgactttattatgaattaattac 890  Q
    |||| ||||||||||||||||||    |||||||||||| ||||||||||||||||||||| ||||||||||    
T  95616 ggttaaacataccataaaagggaattattaccataaaagaaaactgttttgactttattataaattaattac 95687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 845 - 935
Target Start/End: Original strand, 146962 - 147053
Alignment:
Q  845 attaccataaaaggaaactgtttt-gactttattatgaattaattaccacattttccatgtat-aactactatataatttccttttccatatc 935  Q
    |||||| ||| || |||||||||| ||||||||||| |||||||||| ||| |||| |||||| |||||||||||||||||||||| ||||||    
T  146962 attaccgtaatagaaaactgtttttgactttattatcaattaattac-acaatttcaatgtattaactactatataatttcctttttcatatc 147053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 794 - 933
Target Start/End: Original strand, 53685 - 53831
Alignment:
Q  794 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttt-gactttattatgaattaa 886  Q
    ||||| ||||||||||||||||  ||| |  |||| ||||||||||||||||||    |||||||||||||||||| |||| ||| |||| || ||||||    
T  53685 gggtcttgctaaccggtgcccccggggaacgggttaaacataccataaaagggaattattaccataaaaggaaactatttttgacattatgataaattaa 53784  T
Q  887 ttaccacattttccatgtat-aactactatataatttccttttccata 933  Q
    |||| ||| |||  ||| || |||||||||||||||||||||| ||||    
T  53785 ttac-acaattttaatgcattaactactatataatttcctttttcata 53831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 38; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 816 - 928
Target Start/End: Complemental strand, 15058 - 14941
Alignment:
Q  816 gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactg-ttttgactttattatgaattaattaccacattttccatgta-taac 909  Q
    ||||| ||||| | ||||||||||||||||    ||||||||||||||||||| ||||||||||||||| |||||| || |||| ||||  || | ||||    
T  15058 gggcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattataaattaacta-cacaatttcagtgcattaac 14960  T
Q  910 tactatataatttcctttt 928  Q
    |||||||||||||| ||||    
T  14959 tactatataatttcttttt 14941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0524 (Bit Score: 37; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0524
Description:

Target: scaffold0524; HSP #1
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 845 - 935
Target Start/End: Complemental strand, 954 - 863
Alignment:
Q  845 attaccataaaaggaaactg-ttttgactttattatgaattaattaccacattttccatgtat-aactactatataatttccttttccatatc 935  Q
    ||||| ||||||||||| || ||||||||||||||| |||||||||| ||| |||| ||| || |||||||||||||||| ||||| ||||||    
T  954 attactataaaaggaaattgattttgactttattataaattaattac-acaatttcaatgcattaactactatataattttctttttcatatc 863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0425 (Bit Score: 37; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0425
Description:

Target: scaffold0425; HSP #1
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 793 - 890
Target Start/End: Complemental strand, 10897 - 10793
Alignment:
Q  793 tgggtcatgctaaccggtgccccgg--gcattggttgaacataccataaaaggga----ttaccataaaaggaaactg-ttttgactttattatgaatta 885  Q
    |||||| ||||||||| |||||| |  ||| ||||| | ||||||||||| ||||    ||||||||||||||||||| ||||||||||||||| |||||    
T  10897 tgggtcctgctaaccgctgcccccgaggcactggttaagcataccataaatgggaattattaccataaaaggaaactgtttttgactttattataaatta 10798  T
Q  886 attac 890  Q
    |||||    
T  10797 attac 10793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0325 (Bit Score: 31; Significance: 0.0000001; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 823 - 935
Target Start/End: Original strand, 17502 - 17618
Alignment:
Q  823 ggttgaacataccataaaaggga----ttaccataaaaggaaactgtttt-gactttattatgaattaattaccacattttccatgta-taactactata 916  Q
    |||| |||||||||||||| |||    ||| |||||||| |||||||||| ||||||||||| ||||||||  |||| |||| ||| | || ||||||||    
T  17502 ggttaaacataccataaaaaggaattattatcataaaagaaaactgtttttgactttattataaattaatt--cacaatttcaatgcattagctactata 17599  T
Q  917 taatttccttttccatatc 935  Q
    |||||| ||||| ||||||    
T  17600 taattttctttttcatatc 17618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 31; Significance: 0.0000001; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 847 - 935
Target Start/End: Original strand, 11029 - 11118
Alignment:
Q  847 taccataaaaggaaactgtttt-gactttattatgaattaattaccacattttccatgtat-aactactatataatttccttttccatatc 935  Q
    |||||||||| ||||||||||| |||||||||||   |||||||| ||| |||| ||| || ||||| |||||||||||||||| ||||||    
T  11029 taccataaaatgaaactgtttttgactttattatagtttaattac-acaatttcaatgcattaactaatatataatttcctttttcatatc 11118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 850 - 890
Target Start/End: Complemental strand, 233977 - 233936
Alignment:
Q  850 cataaaaggaaactg-ttttgactttattatgaattaattac 890  Q
    ||||||||||||||| ||||||||||||||| ||||||||||    
T  233977 cataaaaggaaactgcttttgactttattataaattaattac 233936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University