View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2583_high_2 (Length: 285)
Name: NF2583_high_2
Description: NF2583
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2583_high_2 |
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Alignment Details
Target: chr4 (Bit Score: 253; Significance: 1e-141; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 9 - 269
Target Start/End: Complemental strand, 52068848 - 52068588
Alignment:
| Q |
9 |
attattctgcaacatttaaagaaaatagcttaacttagttagggacttgtggggctggattgaaatacttgatgaatgctctctctataaagaaatttga |
108 |
Q |
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| T |
52068848 |
attattatgcaacatttaaagaaaatagcttaacttagttagggacttgtggggctggattgaaatacttgatgaatgctctctctataaagaaatttga |
52068749 |
T |
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| Q |
109 |
tggttaccattccataatttaggaggctattgacatggccgggctccagtttttgccttaaatattttatttttctcatcttcataactttttacttctt |
208 |
Q |
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| T |
52068748 |
tggttaccattccataatttaggaggctattgacatggccgggctccagtttttgccttaaatattttatttttctcatcttcataactttttacttctt |
52068649 |
T |
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| Q |
209 |
tctagtttgaattcatcataccaacaataagatcatgttcacttttacagatatacgtatc |
269 |
Q |
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| T |
52068648 |
tctagtttgaattcatcataccaataataagatcatgttcacttttacagatatacgtatc |
52068588 |
T |
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