View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2583_high_3 (Length: 250)

Name: NF2583_high_3
Description: NF2583
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2583_high_3
NF2583_high_3
[»] chr7 (49 HSPs)
chr7 (17-250)||(3403179-3403412)
chr7 (22-110)||(24464659-24464747)
chr7 (22-124)||(19195346-19195447)
chr7 (22-124)||(26385331-26385432)
chr7 (22-124)||(42271402-42271503)
chr7 (24-109)||(4571478-4571563)
chr7 (22-110)||(26126338-26126425)
chr7 (22-192)||(5111442-5111610)
chr7 (22-124)||(3562566-3562666)
chr7 (52-126)||(15681665-15681739)
chr7 (22-124)||(20636689-20636790)
chr7 (22-124)||(20638561-20638662)
chr7 (22-124)||(21224485-21224586)
chr7 (22-124)||(27869328-27869429)
chr7 (22-124)||(35337655-35337756)
chr7 (22-110)||(39182019-39182105)
chr7 (22-91)||(39440253-39440322)
chr7 (22-109)||(18754399-18754485)
chr7 (22-124)||(2331083-2331184)
chr7 (22-124)||(24597648-24597749)
chr7 (22-124)||(31493981-31494081)
chr7 (22-124)||(41452382-41452483)
chr7 (55-112)||(6798079-6798136)
chr7 (22-91)||(15681732-15681801)
chr7 (21-109)||(9157182-9157269)
chr7 (22-86)||(9822232-9822296)
chr7 (22-86)||(10724157-10724221)
chr7 (22-110)||(25002791-25002878)
chr7 (22-109)||(48176096-48176181)
chr7 (22-124)||(17305835-17305935)
chr7 (44-122)||(44078026-44078103)
chr7 (22-125)||(4193620-4193721)
chr7 (22-89)||(6798015-6798082)
chr7 (33-127)||(19493388-19493479)
chr7 (21-124)||(19919735-19919835)
chr7 (22-124)||(23439663-23439765)
chr7 (44-102)||(24448198-24448256)
chr7 (55-124)||(13577951-13578018)
chr7 (25-74)||(42303266-42303315)
chr7 (23-92)||(43251366-43251435)
chr7 (26-109)||(10023921-10024003)
chr7 (22-71)||(5087118-5087167)
chr7 (22-75)||(7365341-7365394)
chr7 (55-124)||(8526866-8526935)
chr7 (55-124)||(11843343-11843411)
chr7 (61-109)||(21225719-21225766)
chr7 (61-109)||(36746674-36746722)
chr7 (63-110)||(15093922-15093969)
chr7 (22-71)||(6650632-6650681)
[»] chr4 (31 HSPs)
chr4 (23-192)||(4098657-4098827)
chr4 (22-127)||(51291302-51291405)
chr4 (21-124)||(15058950-15059052)
chr4 (22-124)||(4433316-4433417)
chr4 (22-124)||(13397808-13397909)
chr4 (26-124)||(43793768-43793865)
chr4 (22-127)||(9195797-9195900)
chr4 (21-124)||(13826551-13826652)
chr4 (21-123)||(1588545-1588645)
chr4 (22-124)||(5304480-5304580)
chr4 (22-124)||(19232476-19232578)
chr4 (22-124)||(25011805-25011906)
chr4 (55-124)||(41877191-41877260)
chr4 (44-124)||(27018285-27018363)
chr4 (22-109)||(35475374-35475460)
chr4 (54-124)||(9397261-9397331)
chr4 (22-104)||(24626353-24626435)
chr4 (80-190)||(36729247-36729357)
chr4 (22-124)||(55780457-55780557)
chr4 (22-124)||(55844637-55844737)
chr4 (28-125)||(6209380-6209476)
chr4 (24-123)||(2931392-2931490)
chr4 (21-124)||(41034706-41034808)
chr4 (22-104)||(4357342-4357423)
chr4 (81-192)||(20919523-20919632)
chr4 (13-124)||(45633507-45633617)
chr4 (61-110)||(48158680-48158729)
chr4 (22-110)||(2715850-2715936)
chr4 (22-101)||(52838321-52838398)
chr4 (22-124)||(6789091-6789192)
chr4 (13-71)||(36729212-36729270)
[»] chr6 (29 HSPs)
chr6 (22-192)||(26239957-26240128)
chr6 (22-124)||(4013799-4013900)
chr6 (18-192)||(16415459-16415634)
chr6 (11-124)||(22968277-22968388)
chr6 (11-124)||(23820005-23820116)
chr6 (22-124)||(15298555-15298656)
chr6 (22-124)||(3118749-3118850)
chr6 (22-124)||(8412828-8412929)
chr6 (22-124)||(18791427-18791528)
chr6 (22-124)||(24603431-24603532)
chr6 (21-127)||(31210861-31210966)
chr6 (22-90)||(12291550-12291618)
chr6 (22-104)||(9241743-9241823)
chr6 (22-124)||(4597538-4597639)
chr6 (22-124)||(24051078-24051179)
chr6 (22-124)||(26710440-26710541)
chr6 (59-124)||(2058991-2059056)
chr6 (55-124)||(34833995-34834064)
chr6 (26-124)||(4370968-4371065)
chr6 (22-124)||(14572311-14572411)
chr6 (22-124)||(25819755-25819855)
chr6 (22-124)||(32451796-32451897)
chr6 (22-127)||(19282344-19282448)
chr6 (44-124)||(32682433-32682511)
chr6 (61-124)||(18749299-18749362)
chr6 (22-89)||(34528252-34528319)
chr6 (22-109)||(35102624-35102710)
chr6 (44-124)||(22269478-22269555)
chr6 (22-82)||(2636888-2636948)
[»] chr5 (31 HSPs)
chr5 (22-198)||(41663656-41663832)
chr5 (13-123)||(38476593-38476703)
chr5 (26-192)||(20653820-20653987)
chr5 (13-127)||(23040072-23040185)
chr5 (22-124)||(37961381-37961483)
chr5 (22-123)||(34125130-34125231)
chr5 (22-124)||(16901130-16901230)
chr5 (22-124)||(25557008-25557109)
chr5 (22-124)||(31055447-31055548)
chr5 (22-124)||(245665-245765)
chr5 (22-124)||(18695074-18695174)
chr5 (22-127)||(17825630-17825734)
chr5 (22-123)||(23765523-23765622)
chr5 (22-123)||(23815371-23815470)
chr5 (22-194)||(35302047-35302219)
chr5 (22-126)||(2373213-2373316)
chr5 (56-124)||(8645867-8645935)
chr5 (61-124)||(26639208-26639271)
chr5 (22-124)||(10293220-10293321)
chr5 (22-124)||(10379352-10379452)
chr5 (22-124)||(16307609-16307711)
chr5 (47-192)||(23040196-23040340)
chr5 (22-124)||(38408699-38408799)
chr5 (22-104)||(40428772-40428853)
chr5 (55-124)||(36641213-36641282)
chr5 (75-124)||(31648125-31648174)
chr5 (22-124)||(19169413-19169514)
chr5 (135-192)||(38476723-38476781)
chr5 (61-110)||(7187273-7187322)
chr5 (44-109)||(7835795-7835858)
chr5 (136-192)||(31576606-31576663)
[»] chr1 (29 HSPs)
chr1 (13-127)||(4455166-4455280)
chr1 (22-123)||(18606816-18606917)
chr1 (22-127)||(29182133-29182237)
chr1 (22-124)||(16551776-16551878)
chr1 (22-124)||(46432349-46432450)
chr1 (46-127)||(21148045-21148126)
chr1 (22-124)||(19078058-19078158)
chr1 (22-124)||(19125948-19126048)
chr1 (24-191)||(2260513-2260677)
chr1 (22-124)||(24962023-24962124)
chr1 (13-197)||(21185203-21185384)
chr1 (22-124)||(9387763-9387865)
chr1 (22-124)||(51719255-51719355)
chr1 (22-124)||(2425295-2425395)
chr1 (22-124)||(4059655-4059756)
chr1 (22-124)||(24749868-24749969)
chr1 (22-124)||(43706787-43706887)
chr1 (33-124)||(22786100-22786190)
chr1 (22-124)||(3616869-3616970)
chr1 (26-124)||(24196331-24196428)
chr1 (22-124)||(48471996-48472097)
chr1 (17-104)||(10684882-10684970)
chr1 (22-110)||(16971934-16972022)
chr1 (68-124)||(28750347-28750403)
chr1 (13-124)||(2657636-2657746)
chr1 (22-104)||(27092985-27093066)
chr1 (71-124)||(28920832-28920885)
chr1 (22-124)||(29676149-29676250)
chr1 (45-110)||(47685185-47685249)
[»] chr3 (39 HSPs)
chr3 (22-124)||(23428752-23428853)
chr3 (22-124)||(4775921-4776022)
chr3 (26-124)||(20001779-20001876)
chr3 (22-109)||(28173862-28173948)
chr3 (22-124)||(22500728-22500829)
chr3 (22-124)||(25022796-25022897)
chr3 (22-124)||(26628158-26628259)
chr3 (22-124)||(27852884-27852985)
chr3 (22-124)||(30155278-30155379)
chr3 (22-124)||(4522024-4522125)
chr3 (22-124)||(8542680-8542781)
chr3 (22-168)||(10743433-10743578)
chr3 (22-124)||(25179648-25179749)
chr3 (44-114)||(33279739-33279809)
chr3 (44-193)||(46673203-46673351)
chr3 (22-124)||(48907425-48907526)
chr3 (22-123)||(48860773-48860873)
chr3 (22-192)||(26633492-26633659)
chr3 (33-127)||(32314988-32315080)
chr3 (22-124)||(8339073-8339174)
chr3 (22-124)||(13080964-13081065)
chr3 (22-104)||(25336445-25336527)
chr3 (25-114)||(1743329-1743417)
chr3 (22-123)||(3328946-3329046)
chr3 (55-124)||(22447909-22447978)
chr3 (44-124)||(40836334-40836411)
chr3 (44-104)||(34878684-34878743)
chr3 (33-124)||(35201139-35201228)
chr3 (22-181)||(23320378-23320532)
chr3 (22-109)||(28155015-28155101)
chr3 (55-124)||(3780951-3781017)
chr3 (45-127)||(18388855-18388936)
chr3 (23-124)||(36311222-36311321)
chr3 (22-122)||(33105013-33105112)
chr3 (60-124)||(46387744-46387807)
chr3 (55-110)||(9496382-9496437)
chr3 (52-104)||(49657943-49657994)
chr3 (22-124)||(22416402-22416505)
chr3 (21-93)||(31039109-31039180)
[»] chr8 (25 HSPs)
chr8 (22-192)||(3207983-3208151)
chr8 (22-124)||(19391520-19391621)
chr8 (22-124)||(30784397-30784498)
chr8 (44-124)||(21666429-21666508)
chr8 (22-124)||(4519000-4519101)
chr8 (22-124)||(17648313-17648414)
chr8 (13-127)||(4423153-4423268)
chr8 (22-123)||(18253019-18253117)
chr8 (55-124)||(21929968-21930036)
chr8 (22-123)||(38630126-38630226)
chr8 (22-124)||(4807733-4807835)
chr8 (22-124)||(5192404-5192505)
chr8 (22-124)||(12723394-12723495)
chr8 (22-124)||(19924335-19924436)
chr8 (22-124)||(33895444-33895545)
chr8 (22-92)||(41385623-41385693)
chr8 (55-124)||(44147042-44147110)
chr8 (22-110)||(41688243-41688331)
chr8 (26-124)||(1824677-1824772)
chr8 (26-124)||(1859122-1859217)
chr8 (22-124)||(8802533-8802633)
chr8 (61-124)||(32400493-32400556)
chr8 (55-124)||(22452338-22452407)
chr8 (55-120)||(3380272-3380337)
chr8 (22-110)||(18881636-18881724)
[»] scaffold0607 (1 HSPs)
scaffold0607 (22-198)||(2182-2357)
[»] chr2 (24 HSPs)
chr2 (25-179)||(36464289-36464441)
chr2 (22-124)||(4587931-4588032)
chr2 (22-192)||(26829222-26829389)
chr2 (22-127)||(2986753-2986857)
chr2 (13-192)||(28365512-28365690)
chr2 (22-121)||(15700820-15700918)
chr2 (22-124)||(331782-331884)
chr2 (22-124)||(25298934-25299035)
chr2 (22-168)||(38716218-38716364)
chr2 (22-124)||(11175977-11176078)
chr2 (22-124)||(25884310-25884411)
chr2 (22-124)||(9051160-9051261)
chr2 (22-124)||(15735134-15735235)
chr2 (55-124)||(6763882-6763951)
chr2 (55-124)||(30714439-30714508)
chr2 (61-124)||(22191116-22191179)
chr2 (22-124)||(9787629-9787730)
chr2 (46-127)||(43301722-43301802)
chr2 (44-111)||(22387223-22387289)
chr2 (22-124)||(18537961-18538062)
chr2 (23-104)||(12350103-12350179)
chr2 (22-93)||(17368317-17368387)
chr2 (55-101)||(1020483-1020529)
chr2 (61-110)||(2190616-2190665)
[»] scaffold0179 (1 HSPs)
scaffold0179 (22-124)||(5782-5883)
[»] scaffold0002 (2 HSPs)
scaffold0002 (33-127)||(454997-455091)
scaffold0002 (22-118)||(455102-455198)
[»] scaffold0291 (1 HSPs)
scaffold0291 (22-127)||(9989-10092)
[»] scaffold0062 (2 HSPs)
scaffold0062 (22-121)||(49732-49830)
scaffold0062 (22-121)||(62271-62369)
[»] scaffold1202 (1 HSPs)
scaffold1202 (22-124)||(1907-2008)
[»] scaffold0025 (2 HSPs)
scaffold0025 (22-179)||(19298-19453)
scaffold0025 (22-124)||(61884-61985)
[»] scaffold0267 (1 HSPs)
scaffold0267 (21-124)||(3700-3800)
[»] scaffold0087 (1 HSPs)
scaffold0087 (55-123)||(25129-25197)
[»] scaffold0174 (1 HSPs)
scaffold0174 (22-123)||(29789-29887)
[»] scaffold0001 (1 HSPs)
scaffold0001 (22-124)||(142080-142180)
[»] scaffold0419 (1 HSPs)
scaffold0419 (22-124)||(3093-3194)
[»] scaffold0014 (1 HSPs)
scaffold0014 (22-104)||(112216-112298)
[»] scaffold0406 (1 HSPs)
scaffold0406 (21-104)||(2081-2163)
[»] scaffold0060 (1 HSPs)
scaffold0060 (22-109)||(66259-66345)
[»] scaffold0150 (1 HSPs)
scaffold0150 (13-109)||(5916-6012)
[»] scaffold1875 (1 HSPs)
scaffold1875 (22-124)||(889-990)
[»] scaffold0171 (1 HSPs)
scaffold0171 (142-179)||(9101-9139)
[»] scaffold0321 (1 HSPs)
scaffold0321 (135-190)||(18730-18786)
[»] scaffold0103 (1 HSPs)
scaffold0103 (22-82)||(3061-3121)
[»] scaffold0024 (1 HSPs)
scaffold0024 (26-110)||(43961-44044)


Alignment Details
Target: chr7 (Bit Score: 189; Significance: 1e-102; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 17 - 250
Target Start/End: Original strand, 3403179 - 3403412
Alignment:
Q  17 tggttataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggt 116  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  3403179 tggtcataatcgcaagtttttgagaacataagggatcaaaagatcatatttcccttatgttagggggtcaaaagagcatattttcctatacatgaggggt 3403278  T
Q  117 cacttttgtcannnnnnncataggaggtcaaaatcgcaacttttaaaacttaagaggtgaaaattgccctttagccaataaattatcttgggaaagtggc 216  Q
    |||||||||||        ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3403279 cacttttgtcattttttttatagggggtcaaaatcgcaacttttaaaacttaagaggtgaaaattgccctttagccaataaattatcttgggaaagtggc 3403378  T
Q  217 aactaaatataaactttcagatgcgatcaagcat 250  Q
    ||||||||||||||||||||||||||||||||||    
T  3403379 aactaaatataaactttcagatgcgatcaagcat 3403412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 22 - 110
Target Start/End: Complemental strand, 24464747 - 24464659
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatg 110  Q
    ||||||||||  ||||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||| | |||||||||| |||||    
T  24464747 ataatcgcaacattttgagaagataaggggtcaaaagatcatatttcccttatgttagggggtcaaaagaacatatttccctaaacatg 24464659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 19195346 - 19195447
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||| ||| ||||||  || ||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||    
T  19195346 ataatcacaactttttgtaaagataaggggtcaaaaaa-catatttcccttatgttaggaggtcaaaagagcgtatttccctaaacatagggggtcactt 19195444  T
Q  122 ttg 124  Q
    |||    
T  19195445 ttg 19195447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 124
Target Start/End: Complemental strand, 26385432 - 26385331
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| |||||||||| ||||| | |||||| |||||||||| ||||||||| |||||||||| ||| |||||||||| |||||| |||||||||    
T  26385432 ataatcgcaactttttgagaagataagaggtcaaaatatcatatttctcttatgtta-ggggtcaaaatagcatatttccctaaacatgatgggtcactt 26385334  T
Q  122 ttg 124  Q
    |||    
T  26385333 ttg 26385331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 124
Target Start/End: Complemental strand, 42271503 - 42271402
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  |||||||||| |||||||  |||||||||||||||||||| |||||||||||| |||||||||| ||||  ||||||||||    
T  42271503 ataatcgcaactttttgtaaacataaggggtcaaaaag-catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcactt 42271405  T
Q  122 ttg 124  Q
    |||    
T  42271404 ttg 42271402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 24 - 109
Target Start/End: Original strand, 4571478 - 4571563
Alignment:
Q  24 aatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacat 109  Q
    |||||||| |||||||||| ||||||| |||||| |||||||||||||||||||| ||||| |||||||| |||||||||| ||||    
T  4571478 aatcgcaactttttgagaagataaggggtcaaaagatcatatttcccttatgttatggggtaaaaagagcatatttccctaaacat 4571563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 110
Target Start/End: Complemental strand, 26126425 - 26126338
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatg 110  Q
    |||||||||| |||||||||| ||||||| |||||| |||||||||||||||||||| |||||||||| ||| |||||||||| |||||    
T  26126425 ataatcgcaactttttgagaagataaggggtcaaaagatcatatttcccttatgtta-ggggtcaaaaaagcatatttccctaaacatg 26126338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 22 - 192
Target Start/End: Complemental strand, 5111610 - 5111442
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| |||||||||| ||||||| |||||| |||||||||||||||||||| |||||||||||| | ||||| |||| ||||  ||||||||||    
T  5111610 ataatcgcaactttttgagaagataaggggtcaaaatatcatatttcccttatgtta-ggggtcaaaagaacatattttcctaaacat--ggggtcactt 5111514  T
Q  122 ttgtcannnnnnncataggaggtcaaaatcgcaa-cttttaaaacttaagaggtgaaaattgccctttagcc 192  Q
    || ||        || |||||| ||||||| |||  |||| ||||||||| |||||||| ||| ||||||||    
T  5111513 ttatcctttttttcacaggaggccaaaatcacaagtttttgaaacttaaggggtgaaaagtgcactttagcc 5111442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 3562566 - 3562666
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || ||||||| |||||||  |||||||||||||||||||| |||||||||||| |||||||||| |||| |||||||||||    
T  3562566 ataatcgcaactttttgtaaagataaggggtcaaaaag-catatttcccttatgttaggaggtcaaaagagcatatttccctaaacat-aggggtcactt 3562663  T
Q  122 ttg 124  Q
    |||    
T  3562664 ttg 3562666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 52 - 126
Target Start/End: Complemental strand, 15681739 - 15681665
Alignment:
Q  52 tcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcacttttgtc 126  Q
    |||||| |||||| |||||||||||||||||||||||||||| |||||||||| |||||||| ||||| ||||||    
T  15681739 tcaaaagatcatagttcccttatgttagggggtcaaaagagcatatttccctaaacatgaggtgtcacatttgtc 15681665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 22 - 124
Target Start/End: Complemental strand, 20636790 - 20636689
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || ||||||| |||||||  |||||||||||||||||||| |||||||||||| |||||||||| ||||  ||||||||||    
T  20636790 ataatcgcaactttttgtaaagataaggggtcaaaaag-catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcactt 20636692  T
Q  122 ttg 124  Q
    |||    
T  20636691 ttg 20636689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 22 - 124
Target Start/End: Complemental strand, 20638662 - 20638561
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || ||||||| |||||||  |||||||||||||||||||| |||||||||||| |||||||||| ||||  ||||||||||    
T  20638662 ataatcgcaactttttgtaaagataaggggtcaaaaag-catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcactt 20638564  T
Q  122 ttg 124  Q
    |||    
T  20638563 ttg 20638561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 21224485 - 21224586
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || ||||||| |||||||  |||||||||||||||||||| |||||||||||| |||||||||| ||||  ||||||||||    
T  21224485 ataatcgcaactttttgtaaagataaggggtcaaaaag-catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcactt 21224583  T
Q  122 ttg 124  Q
    |||    
T  21224584 ttg 21224586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 27869328 - 27869429
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || ||||||| |||||||  |||||||||||||||||||| |||||||||||| |||||||||| ||||  ||||||||||    
T  27869328 ataatcgcaactttttgtaaagataaggggtcaaaaag-catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcactt 27869426  T
Q  122 ttg 124  Q
    |||    
T  27869427 ttg 27869429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 35337655 - 35337756
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || ||||||| |||||||  |||||||||||||||||||| |||||||||||| |||||||||| ||||  ||||||||||    
T  35337655 ataatcgcaactttttgtaaagataaggggtcaaaaag-catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcactt 35337753  T
Q  122 ttg 124  Q
    |||    
T  35337754 ttg 35337756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 22 - 110
Target Start/End: Complemental strand, 39182105 - 39182019
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatg 110  Q
    |||||||||| |||||||||| ||||||| |||||| ||||||||||||||||||||   |||||||||||| |||||||||| |||||    
T  39182105 ataatcgcaactttttgagaagataaggggtcaaaagatcatatttcccttatgtta--tggtcaaaagagcatatttccctaaacatg 39182019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 22 - 91
Target Start/End: Original strand, 39440253 - 39440322
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaaga 91  Q
    |||||||||| ||||||| || |||||||||||||| |||||||||||||||||||||| ||||||||||    
T  39440253 ataatcgcaactttttgaaaagataagggatcaaaagatcatatttcccttatgttaggaggtcaaaaga 39440322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 109
Target Start/End: Original strand, 18754399 - 18754485
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacat 109  Q
    ||||||||||  |||||  || ||||||| |||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  18754399 ataatcgcaacattttgtaaagataaggggtcaaaaaa-catatttcccttatgttagggggtcaaaagagcatatttccctaaacat 18754485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 124
Target Start/End: Complemental strand, 2331184 - 2331083
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || ||||||  |||||||  |||||||||||||||||||| |||||||||||| |||||||||| ||||  ||||||||||    
T  2331184 ataatcgcaactttttgtaaagataaggagtcaaaaag-catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcactt 2331086  T
Q  122 ttg 124  Q
    |||    
T  2331085 ttg 2331083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 24597648 - 24597749
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || | ||||| |||||||| |||||||||||||||||||| |||||||||||| |||||||||| ||||  ||||| ||||    
T  24597648 ataatcgcaactttttgtaaagagaaggggtcaaaaaa-catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggttactt 24597746  T
Q  122 ttg 124  Q
    |||    
T  24597747 ttg 24597749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 124
Target Start/End: Complemental strand, 31494081 - 31493981
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || ||||||| |||||||  ||||||| ||||||||||| ||||||||||||| |||||||||| |||| |||||||||||    
T  31494081 ataatcgcaactttttgtaaagataaggggtcaaaaag-catattttccttatgttagagggtcaaaagagcatatttccctaaacat-aggggtcactt 31493984  T
Q  122 ttg 124  Q
    |||    
T  31493983 ttg 31493981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 41452382 - 41452483
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || ||||||| |||||||  |||||||||||||||||||| ||||| |||||  |||||||||| |||| |||||||||||    
T  41452382 ataatcgcaactttttgtaaagataaggggtcaaaaag-catatttcccttatgttaggaggtcagaagagtatatttccctaaacataaggggtcactt 41452480  T
Q  122 ttg 124  Q
    |||    
T  41452481 ttg 41452483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 55 - 112
Target Start/End: Original strand, 6798079 - 6798136
Alignment:
Q  55 aaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgag 112  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||||| |||||||    
T  6798079 aaaaatcatatttcccttatgttagagggtcaaaagagcatatttccctaaacatgag 6798136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 91
Target Start/End: Complemental strand, 15681801 - 15681732
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaaga 91  Q
    |||||||||| ||||||| || ||||||| |||||| |||||| ||||||||||||||||||||||||||    
T  15681801 ataatcgcaactttttgacaagataaggggtcaaaagatcatagttcccttatgttagggggtcaaaaga 15681732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 21 - 109
Target Start/End: Original strand, 9157182 - 9157269
Alignment:
Q  21 tataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacat 109  Q
    ||||||||||| |||||||||| ||||| | |||||| |||||||||| ||||||||| |||||||||||||| ||||| |||| ||||    
T  9157182 tataatcgcaactttttgagaagataagtggtcaaaagatcatatttcacttatgtta-ggggtcaaaagagcatattttcctaaacat 9157269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 22 - 86
Target Start/End: Original strand, 9822232 - 9822296
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtca 86  Q
    |||||||||| |||||||||| ||||||| |||||| ||| ||||||||||||||||||||||||    
T  9822232 ataatcgcaactttttgagaagataaggggtcaaaagatcgtatttcccttatgttagggggtca 9822296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 22 - 86
Target Start/End: Original strand, 10724157 - 10724221
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtca 86  Q
    |||||||||| |||||||||| ||||||| |||||| ||| ||||||||||||||||||||||||    
T  10724157 ataatcgcaactttttgagaagataaggggtcaaaagatcgtatttcccttatgttagggggtca 10724221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 22 - 110
Target Start/End: Complemental strand, 25002878 - 25002791
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatg 110  Q
    |||||||||| ||| |||||| ||||||| |||||| ||||||||||| |||||||| |||||||||||||| | |||||||| |||||    
T  25002878 ataatcgcaaatttatgagaagataaggggtcaaaagatcatatttcctttatgtta-ggggtcaaaagagcatgtttccctaaacatg 25002791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 22 - 109
Target Start/End: Original strand, 48176096 - 48176181
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacat 109  Q
    |||||||||| ||||||  || ||||||| |||||||| |||||||||||||||||| |||||||||||||| |||||||||| ||||    
T  48176096 ataatcgcaactttttgtaaagataaggggtcaaaaaa-catatttcccttatgtta-ggggtcaaaagagcatatttccctaaacat 48176181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 124
Target Start/End: Complemental strand, 17305935 - 17305835
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||| ||| ||||||  || ||||||| |||||||  |||||||||||||||||||| |||||||||||| ||||| |||| |||| |||||||||||    
T  17305935 ataatcacaactttttgtaaaaataaggggtcaaaaag-catatttcccttatgttaggaggtcaaaagagcatattttcctaaacat-aggggtcactt 17305838  T
Q  122 ttg 124  Q
    |||    
T  17305837 ttg 17305835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 44 - 122
Target Start/End: Original strand, 44078026 - 44078103
Alignment:
Q  44 ataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcacttt 122  Q
    ||||||| |||||||| |||||||| ||||||||||| |||||||||||| |||||||||| ||||||  |||||||||    
T  44078026 ataaggggtcaaaaaa-catatttctcttatgttaggaggtcaaaagagcatatttccctaaacatgataggtcacttt 44078103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 22 - 125
Target Start/End: Complemental strand, 4193721 - 4193620
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    ||||| |||| ||||||| || ||||||| |||||| |||||||||| ||||||||| ||| |||||||||| |||||||||| ||   |||||||||||    
T  4193721 ataattgcaactttttgaaaagataaggggtcaaaagatcatatttctcttatgttaaggg-tcaaaagagcatatttccctaaac-gcaggggtcactt 4193624  T
Q  122 ttgt 125  Q
    ||||    
T  4193623 ttgt 4193620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 22 - 89
Target Start/End: Original strand, 6798015 - 6798082
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaa 89  Q
    |||||||||| ||||| |||| ||||||| |||||| ||||||||| ||||||||||| |||||||||    
T  6798015 ataatcgcaacttttttagaagataaggggtcaaaagatcatattttccttatgttagagggtcaaaa 6798082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 33 - 127
Target Start/End: Complemental strand, 19493479 - 19493388
Alignment:
Q  33 tttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcacttttgtca 127  Q
    |||||||||| |||| || |||||||||||||||| |||||||||  |||||||||| ||| ||||||| || ||||  ||||||||||||||||    
T  19493479 tttttgagaagataaagggtcaaaaaatcatattttccttatgtt-tggggtcaaaatagcatatttccataaacat--ggggtcacttttgtca 19493388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 21 - 124
Target Start/End: Original strand, 19919735 - 19919835
Alignment:
Q  21 tataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcact 120  Q
    ||||||| ||| ||||||  || ||||||| |||||||| ||||||| |||||||||||| |||||||||||| ||||| |||| ||||| |||||||||    
T  19919735 tataatcacaactttttgtaaagataaggggtcaaaaaa-catattttccttatgttaggaggtcaaaagagcatattt-cctaaacatg-ggggtcact 19919831  T
Q  121 tttg 124  Q
    ||||    
T  19919832 tttg 19919835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 124
Target Start/End: Complemental strand, 23439765 - 23439663
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||| | || |||||||||||||| | ||||||||||||| ||||| | ||||||| | | ||||||| || ||||| || |||||||    
T  23439765 ataatcgcaacttttttaaaagataagggatcaaaagagcatatttcccttaagttagagagtcaaaatatcatatttccttaaacatggggagtcactt 23439666  T
Q  122 ttg 124  Q
    |||    
T  23439665 ttg 23439663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 102
Target Start/End: Original strand, 24448198 - 24448256
Alignment:
Q  44 ataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccc 102  Q
    ||||||| ||| |||| ||||||||||||||||||||||||||||| ||| ||||||||    
T  24448198 ataaggggtcataaaaacatatttcccttatgttagggggtcaaaaaagcatatttccc 24448256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 13577951 - 13578018
Alignment:
Q  55 aaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcacttttg 124  Q
    ||||| |||||||||||||||||| |||||||||||||| ||||||| || |||| ||||||||||||||    
T  13577951 aaaaagcatatttcccttatgtta-ggggtcaaaagagcatatttccttaaacat-aggggtcacttttg 13578018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 42303315 - 42303266
Alignment:
Q  25 atcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttat 74  Q
    |||||||||||||||||| ||||||| |||||| ||||||||||||||||    
T  42303315 atcgcaagtttttgagaagataaggggtcaaaagatcatatttcccttat 42303266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 43251435 - 43251366
Alignment:
Q  23 taatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagag 92  Q
    |||||| || |||||||||| |||| |  |||||| ||||||||||||||||||||| ||||||||||||    
T  43251435 taatcgtaactttttgagaagataaagagtcaaaagatcatatttcccttatgttagagggtcaaaagag 43251366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 109
Target Start/End: Original strand, 10023921 - 10024003
Alignment:
Q  26 tcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacat 109  Q
    |||||| ||||||  || ||||||| ||||||||  |||||| |||||||| |||||||||||||||| |||||||||| ||||    
T  10023921 tcgcaactttttgtaaagataaggggtcaaaaaaa-atattttccttatgtaagggggtcaaaagagcatatttccctaaacat 10024003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 5087167 - 5087118
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttccct 71  Q
    |||||||||| ||||||| || ||||||| ||||||||||||||||||||    
T  5087167 ataatcgcaactttttgaaaagataaggggtcaaaaaatcatatttccct 5087118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 75
Target Start/End: Complemental strand, 7365394 - 7365341
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatg 75  Q
    |||||||||| |||||||||| ||||||  |||||| |||||||||||||||||    
T  7365394 ataatcgcaactttttgagaagataaggagtcaaaatatcatatttcccttatg 7365341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 124
Target Start/End: Complemental strand, 8526935 - 8526866
Alignment:
Q  55 aaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcacttttg 124  Q
    ||||| |||||||||||||||||||| ||||||| |||| ||||| |||| ||||  ||||||| |||||    
T  8526935 aaaaagcatatttcccttatgttaggaggtcaaatgagcatattttcctaaacatagggggtcatttttg 8526866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 11843343 - 11843411
Alignment:
Q  55 aaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcacttttg 124  Q
    ||||| ||||||| |||||||||||||| |||||||||| |||||||||| ||||  | |||||||||||    
T  11843343 aaaaagcatattttccttatgttagggg-tcaaaagagcatatttccctaaacataggaggtcacttttg 11843411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 109
Target Start/End: Original strand, 21225719 - 21225766
Alignment:
Q  61 catatttcccttatgttagggggtcaaaagagcgtatttccctatacat 109  Q
    |||||||||||||||||| |||||||||||||| |||||||||| ||||    
T  21225719 catatttcccttatgtta-ggggtcaaaagagcatatttccctaaacat 21225766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 109
Target Start/End: Original strand, 36746674 - 36746722
Alignment:
Q  61 catatttcccttatgttagggggtcaaaagagcgtatttccctatacat 109  Q
    |||||||| ||||||||||| |||||||||||| |||||||||| ||||    
T  36746674 catatttctcttatgttaggaggtcaaaagagcatatttccctaaacat 36746722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 110
Target Start/End: Original strand, 15093922 - 15093969
Alignment:
Q  63 tatttcccttatgttagggggtcaaaagagcgtatttccctatacatg 110  Q
    |||||||||| ||||||||||| |||||||| |||||||||| |||||    
T  15093922 tatttcccttttgttagggggttaaaagagcttatttccctaaacatg 15093969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 6650681 - 6650632
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttccct 71  Q
    |||||||||| |||||||||| ||||||| |||||| | |||||||||||    
T  6650681 ataatcgcaactttttgagaagataaggggtcaaaagagcatatttccct 6650632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 74; Significance: 5e-34; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 23 - 192
Target Start/End: Complemental strand, 4098827 - 4098657
Alignment:
Q  23 taatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcacttt 122  Q
    |||| |||| |||||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||| |||||||| | ||||  |||||||||||    
T  4098827 taattgcaactttttgagaagataaggggtcaaaagatcatatttcccttatgttagggggtcaaaagagcatatttcccaaaacatagggggtcacttt 4098728  T
Q  123 tgtcannnnnnncataggaggtcaaaatcgcaa-cttttaaaacttaagaggtgaaaattgccctttagcc 192  Q
    ||||         ||||| |||||||||| |||  ||||||||||||||||||||||| ||| ||||||||    
T  4098727 tgtcgtttttttaatagggggtcaaaatcacaattttttaaaacttaagaggtgaaaagtgcactttagcc 4098657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 22 - 127
Target Start/End: Original strand, 51291302 - 51291405
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||| ||| |||||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||| | |||||||||| ||||||  ||||||||    
T  51291302 ataatcacaactttttgagaagataaggggtcaaaagatcatatttcccttatgttagggggtcaaaagaacatatttccctaaacatga--ggtcactt 51291399  T
Q  122 ttgtca 127  Q
    ||||||    
T  51291400 ttgtca 51291405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 21 - 124
Target Start/End: Original strand, 15058950 - 15059052
Alignment:
Q  21 tataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcact 120  Q
    ||||||||||| ||||||  || ||||||| |||||||  |||||||||||||||||||| |||||||||||| |||||||||| ||||  |||||||||    
T  15058950 tataatcgcaactttttgtaaagataaggggtcaaaaag-catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcact 15059048  T
Q  121 tttg 124  Q
    ||||    
T  15059049 tttg 15059052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 4433316 - 4433417
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||| ||| ||||||  || ||||||| |||||||| ||||||| ||||||||||||||||||||||||| |||||||||| ||||  ||||||||||    
T  4433316 ataatcacaactttttgtaaagataaggggtcaaaaaa-catattttccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcactt 4433414  T
Q  122 ttg 124  Q
    |||    
T  4433415 ttg 4433417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 13397808 - 13397909
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || ||||||| |||||||  |||||||||||||||||||| |||||||||||| |||||||||| ||||  ||||||||||    
T  13397808 ataatcgcaactttttgtaaagataaggggtcaaaaag-catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcactt 13397906  T
Q  122 ttg 124  Q
    |||    
T  13397907 ttg 13397909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 26 - 124
Target Start/End: Original strand, 43793768 - 43793865
Alignment:
Q  26 tcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcacttttg 124  Q
    |||||| ||||||  || ||||||| |||||||| |||||||||||||||||||| |||||||||||| |||||||||| ||||  |||||||||||||    
T  43793768 tcgcaactttttgtaaatataaggggtcaaaaaa-catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatatggggtcacttttg 43793865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 22 - 127
Target Start/End: Original strand, 9195797 - 9195900
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || ||||||| |||||||| |||||||||||||||||| ||| |||||||||| |||||||||| ||||  ||||||||||    
T  9195797 ataatcgcaactttttgtaaagataaggggtcaaaaaa-catatttcccttatgttatggg-tcaaaagagcatatttccctaaacatagggggtcactt 9195894  T
Q  122 ttgtca 127  Q
    ||||||    
T  9195895 ttgtca 9195900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 124
Target Start/End: Original strand, 13826551 - 13826652
Alignment:
Q  21 tataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcact 120  Q
    ||||||||||| ||||||  || ||||||| |||||||  |||||||||||||||||||| |||||||||||| |||||||| | |||| ||||||||||    
T  13826551 tataatcgcaactttttgtaaagataaggggtcaaaaag-catatttcccttatgttaggaggtcaaaagagcatatttcccgaaacat-aggggtcact 13826648  T
Q  121 tttg 124  Q
    ||||    
T  13826649 tttg 13826652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 21 - 123
Target Start/End: Original strand, 1588545 - 1588645
Alignment:
Q  21 tataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcact 120  Q
    ||||||||||| ||||||  || ||||||| |||||||| |||||||||||||||||| |||||||||||||| |||||||||| ||||  | |||||||    
T  1588545 tataatcgcaactttttgtaaagataaggggtcaaaaaa-catatttcccttatgtta-ggggtcaaaagagcatatttccctaaacataggaggtcact 1588642  T
Q  121 ttt 123  Q
    |||    
T  1588643 ttt 1588645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 5304480 - 5304580
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || ||||||| |||||||  ||||||| |||||||||||| |||||||||||| |||||||||| |||| |||||||||||    
T  5304480 ataatcgcaactttttgtaaagataaggggtcaaaaag-catattttccttatgttaggaggtcaaaagagcatatttccctaaacat-aggggtcactt 5304577  T
Q  122 ttg 124  Q
    |||    
T  5304578 ttg 5304580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 19232476 - 19232578
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || ||||||| | |||||| ||||||| ||||||||||||| ||||||||||| |||||||||| ||||  ||| ||||||    
T  19232476 ataatcgcaactttttgtaaagataaggggtaaaaaaaacatattttccttatgttagggagtcaaaagagcatatttccctaaacatatgggatcactt 19232575  T
Q  122 ttg 124  Q
    |||    
T  19232576 ttg 19232578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 124
Target Start/End: Complemental strand, 25011906 - 25011805
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||| ||| ||||||  || ||||||| |||||||| |||||  |||||||||||||||||||||||||| |||||||||| ||||  ||||||||||    
T  25011906 ataatcccaactttttgtaaagataaggggtcaaaaaa-catatcccccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcactt 25011808  T
Q  122 ttg 124  Q
    |||    
T  25011807 ttg 25011805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 41877191 - 41877260
Alignment:
Q  55 aaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcacttttg 124  Q
    ||||| |||||||||||||||||||| |||||||||||| |||||||||| ||||  |||||||||||||    
T  41877191 aaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttg 41877260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 44 - 124
Target Start/End: Complemental strand, 27018363 - 27018285
Alignment:
Q  44 ataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcacttttg 124  Q
    ||||||| |||||||| |||||||||||| |||||||||||||||||||| |||||||||| |||| | ||||||||||||    
T  27018363 ataaggggtcaaaaaa-catatttcccttttgttagggggtcaaaagagcatatttccctaaacat-atgggtcacttttg 27018285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 22 - 109
Target Start/End: Complemental strand, 35475460 - 35475374
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacat 109  Q
    |||||||| | ||||||  || ||||||| |||||||| |||||||||||||||||||| |||||||||||| |||||||||| ||||    
T  35475460 ataatcgctactttttgtaaagataaggggtcaaaaaa-catatttcccttatgttaggaggtcaaaagagcatatttccctaaacat 35475374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 124
Target Start/End: Complemental strand, 9397331 - 9397261
Alignment:
Q  54 aaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcacttttg 124  Q
    |||||| ||||||||| ||||||||| ||||||||||||| |||||||||||||||| | | |||||||||    
T  9397331 aaaaaaacatatttcctttatgttagagggtcaaaagagcatatttccctatacatgggagatcacttttg 9397261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 24626353 - 24626435
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttcccta 104  Q
    |||||| ||| |||||||||| ||||||  |||||| ||||||||||||||||||||  | ||||||||||| ||||||||||    
T  24626353 ataatcacaactttttgagaagataaggagtcaaaagatcatatttcccttatgttattgagtcaaaagagcatatttcccta 24626435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 80 - 190
Target Start/End: Original strand, 36729247 - 36729357
Alignment:
Q  80 ggggtcaaaagagcgtatttccctatacatgaggggtcacttttgtcannnnnnncataggaggtcaaaatcgcaac-ttttaaaacttaagaggtgaaa 178  Q
    |||||||||||| | |||||||||| |||||| |||||||||||||||       ||||||  |||||||||||||| |||||||||||||| |||||||    
T  36729247 ggggtcaaaagatcatatttccctaaacatga-gggtcacttttgtcaattttttcatagggagtcaaaatcgcaactttttaaaacttaaggggtgaaa 36729345  T
Q  179 attgccctttag 190  Q
    | ||| ||||||    
T  36729346 aatgcactttag 36729357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 124
Target Start/End: Complemental strand, 55780557 - 55780457
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || ||||||| |||||||| ||||||| ||||| |||||||| |||||||||| |||||||||| ||||  ||||||||||    
T  55780557 ataatcgcaactttttgtaaagataaggggtcaaaaaa-catattttccttaggttagggg-tcaaaagagcatatttccctaaacatagggggtcactt 55780460  T
Q  122 ttg 124  Q
    |||    
T  55780459 ttg 55780457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 124
Target Start/End: Complemental strand, 55844737 - 55844637
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || ||||||| |||||||| ||||||| ||||| |||||||| |||||||||| |||||||||| ||||  ||||||||||    
T  55844737 ataatcgcaactttttgtaaagataaggggtcaaaaaa-catattttccttaggttagggg-tcaaaagagcatatttccctaaacatagggggtcactt 55844640  T
Q  122 ttg 124  Q
    |||    
T  55844639 ttg 55844637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 125
Target Start/End: Original strand, 6209380 - 6209476
Alignment:
Q  28 gcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcacttttgt 125  Q
    |||| |||||||||| ||||||| ||| || ||||| |||||||||||||| ||||||||||  || || ||||||| ||||| ||||||||||||||    
T  6209380 gcaactttttgagaagataaggggtcataagatcatttttcccttatgtta-ggggtcaaaaatgcataattccctaaacatgtggggtcacttttgt 6209476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 24 - 123
Target Start/End: Complemental strand, 2931490 - 2931392
Alignment:
Q  24 aatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactttt 123  Q
    |||||||| ||||||  || ||||||| |||||||  ||||||||| |||||||| | |||||||||||| |||||||||| ||||  ||||||||||||    
T  2931490 aatcgcaattttttgtaaagataaggggtcaaaaag-catatttcctttatgttatgaggtcaaaagagcatatttccctaaacatagggggtcactttt 2931392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 21 - 124
Target Start/End: Complemental strand, 41034808 - 41034706
Alignment:
Q  21 tataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcact 120  Q
    ||||||||||| ||||||  || ||||||| |||||||  |||||||||||||||||||| |||||||||| | |||||||||   |||  |||||||||    
T  41034808 tataatcgcaactttttgtaaaaataaggggtcaaaaag-catatttcccttatgttaggaggtcaaaagatcatatttccctgagcatagggggtcact 41034710  T
Q  121 tttg 124  Q
    ||||    
T  41034709 tttg 41034706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 4357423 - 4357342
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttcccta 104  Q
    |||||||||| ||||||  || ||||||| |||||||  |||||||||||||||||||  |||||||||||| ||||||||||    
T  4357423 ataatcgcaactttttgtaaagataaggggtcaaaaag-catatttcccttatgttagaaggtcaaaagagcatatttcccta 4357342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 81 - 192
Target Start/End: Original strand, 20919523 - 20919632
Alignment:
Q  81 gggtcaaaagagcgtatttccctatacatgaggggtcacttttgtcannnnnnncataggaggtcaaaatcgcaactttt-aaaacttaagaggtgaaaa 179  Q
    ||||||||||||| |||||||||| ||||   || ||||||||||||       |||||||| ||||||||||||||||| |||||||||| ||||||||    
T  20919523 gggtcaaaagagcatatttccctaaacatt--ggatcacttttgtcatttttttcataggag-tcaaaatcgcaactttttaaaacttaaggggtgaaaa 20919619  T
Q  180 ttgccctttagcc 192  Q
     ||| ||||||||    
T  20919620 atgcactttagcc 20919632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 124
Target Start/End: Complemental strand, 45633617 - 45633507
Alignment:
Q  13 aaaatggttataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgag 112  Q
    |||| ||| |||||| ||| ||||| | || ||||||| |||||| | ||||||||| |||||||||| |||||| ||||| |||||||||| ||||  |    
T  45633617 aaaagggtcataatcacaacttttttaaaagataaggggtcaaaagagcatatttcc-ttatgttaggcggtcaatagagcatatttccctaaacatagg 45633519  T
Q  113 gggtcacttttg 124  Q
    | ||||||||||    
T  45633518 gagtcacttttg 45633507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 61 - 110
Target Start/End: Complemental strand, 48158729 - 48158680
Alignment:
Q  61 catatttcccttatgttagggggtcaaaagagcgtatttccctatacatg 110  Q
    ||||||||||||||||||| ||||||||||| | |||||||||| |||||    
T  48158729 catatttcccttatgttagagggtcaaaagatcatatttccctaaacatg 48158680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 110
Target Start/End: Original strand, 2715850 - 2715936
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatg 110  Q
    |||||||||| ||||||  || ||||||| |||||||  |||||||||| ||||||| |||||||||||| | ||||||||||| ||||    
T  2715850 ataatcgcaactttttgtaaagataaggggtcaaaaag-catatttcccatatgtta-ggggtcaaaagatcatatttccctattcatg 2715936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 101
Target Start/End: Complemental strand, 52838398 - 52838321
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttcc 101  Q
    |||||||||| ||||||  || ||||||| |||||||  |||||||||| ||||||||| |||||||||||| |||||||    
T  52838398 ataatcgcaactttttgtaaagataaggg-tcaaaaag-catatttcccgtatgttaggaggtcaaaagagcatatttcc 52838321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 6789091 - 6789192
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || |||| || |||||||| ||| |||| || |||||||| |||| ||| ||| |||||||||| ||||  ||||||||||    
T  6789091 ataatcgcaattttttgtaaagataacgggtcaaaaaa-catttttctctcatgttaggaggtcgaaacagcatatttccctaaacatagggggtcactt 6789189  T
Q  122 ttg 124  Q
    |||    
T  6789190 ttg 6789192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 71
Target Start/End: Original strand, 36729212 - 36729270
Alignment:
Q  13 aaaatggttataatcgcaagtttttgagaacataagggatcaaaaaatcatatttccct 71  Q
    |||| ||| ||||||| || |||||||||| ||||||| |||||| |||||||||||||    
T  36729212 aaaaaggtcataatcgaaactttttgagaagataaggggtcaaaagatcatatttccct 36729270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 67; Significance: 7e-30; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 22 - 192
Target Start/End: Complemental strand, 26240128 - 26239957
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgtta-gggggtcaaaagagcgtatttccctatacatgaggggtcact 120  Q
    ||||| |||| ||||| |||| ||||||| |||||| |||||||||||||||||||| ||||||||||||||| ||||||| || |||||||||||||||    
T  26240128 ataattgcaacttttttagaagataaggggtcaaaagatcatatttcccttatgttaagggggtcaaaagagcatatttccgtaaacatgaggggtcact 26240029  T
Q  121 tttgtcannnnnnncataggaggtcaaaatcgcaac-ttttaaaacttaagaggtgaaaattgccctttagcc 192  Q
    |||||||       |||||  || ||||||| |||| |||||||||||||| |||||||| ||| ||||||||    
T  26240028 tttgtca-ttttttcatagcgggacaaaatcacaactttttaaaacttaaggggtgaaaagtgctctttagcc 26239957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 4013799 - 4013900
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    ||||||||||  ||||||||| ||||||| |||||| |||||||||||||||| |||||||||||||||||| |||||||||| ||||| ||||||||||    
T  4013799 ataatcgcaacattttgagaagataaggggtcaaaagatcatatttcccttatattagggggtcaaaagagcatatttccctaaacatg-ggggtcactt 4013897  T
Q  122 ttg 124  Q
    |||    
T  4013898 ttg 4013900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 192
Target Start/End: Original strand, 16415459 - 16415634
Alignment:
Q  18 ggttataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtc 117  Q
    |||||||||||||| ||||| |||| ||||| | |||||| |||||||||||||||||||||| ||||||||||   |||||||||| |||| |||||||    
T  16415459 ggttataatcgcaacttttttagaagataagcggtcaaaatatcatatttcccttatgttaggcggtcaaaagaatatatttccctaaacat-aggggtc 16415557  T
Q  118 acttttgt-cannnnnnncataggaggtcaaaatcgcaac-ttttaaaacttaagaggtgaaaattgccctttagcc 192  Q
    ||||||||  |       |||| | ||||||||||||||| |||||||| ||||| |||||||| ||| ||||||||    
T  16415558 acttttgtaaaaaaaaatcataaggggtcaaaatcgcaactttttaaaatttaaggggtgaaaagtgcactttagcc 16415634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 22968277 - 22968388
Alignment:
Q  11 agaaaatggttataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatg 110  Q
    |||||| ||| |||||||||| ||||||  || ||||||| |||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||     
T  22968277 agaaaagggtcataatcgcaactttttgtaaagataaggg-tcaaaaaa-catatttcccttatgttagggggtcaaaagagcatatttccctaaacata 22968374  T
Q  111 aggggtcacttttg 124  Q
     |||||||||||||    
T  22968375 gggggtcacttttg 22968388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 23820116 - 23820005
Alignment:
Q  11 agaaaatggttataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatg 110  Q
    |||||| ||| |||||||||| ||||||  || ||||||| |||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||     
T  23820116 agaaaagggtcataatcgcaactttttgtaaagataaggg-tcaaaaaa-catatttcccttatgttagggggtcaaaagagcatatttccctaaacata 23820019  T
Q  111 aggggtcacttttg 124  Q
     |||||||||||||    
T  23820018 gggggtcacttttg 23820005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 124
Target Start/End: Complemental strand, 15298656 - 15298555
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || |||||||||||||||| ||||||| |||||||||||| |||||||||||| |||||||||| ||||  ||||||||||    
T  15298656 ataatcgcaactttttgtaaagataagggatcaaaaaa-catattttccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcactt 15298558  T
Q  122 ttg 124  Q
    |||    
T  15298557 ttg 15298555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 22 - 124
Target Start/End: Complemental strand, 3118850 - 3118749
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || ||||| | |||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||   |||||||||    
T  3118850 ataatcgcaaatttttgtaaagataagaggtcaaaaaa-catatttcccttatgttagggggtcaaaagagcatatttccctaaacatagagggtcactt 3118752  T
Q  122 ttg 124  Q
    |||    
T  3118751 ttg 3118749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 22 - 124
Target Start/End: Complemental strand, 8412929 - 8412828
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || ||||||| |||||||| ||||||||||||||||||||||||||||||||| |||||| ||| ||||  |||||| |||    
T  8412929 ataatcgcaactttttgtaaagataaggggtcaaaaaa-catatttcccttatgttagggggtcaaaagagcatatttctctaaacatagggggtcgctt 8412831  T
Q  122 ttg 124  Q
    |||    
T  8412830 ttg 8412828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 22 - 124
Target Start/End: Complemental strand, 18791528 - 18791427
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || || |||| |||||||  ||||||||||||||||||||||||||||||||| |||||||||| ||||  ||||||||||    
T  18791528 ataatcgcaactttttgtaaagatgaggggtcaaaaag-catatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcactt 18791430  T
Q  122 ttg 124  Q
    |||    
T  18791429 ttg 18791427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 22 - 124
Target Start/End: Complemental strand, 24603532 - 24603431
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || ||||||| |||||||  |||||||||||||||||||| |||||||||||| |||||||||| ||||  ||||||||||    
T  24603532 ataatcgcaactttttgtaaagataaggggtcaaaaag-catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcactt 24603434  T
Q  122 ttg 124  Q
    |||    
T  24603433 ttg 24603431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 21 - 127
Target Start/End: Complemental strand, 31210966 - 31210861
Alignment:
Q  21 tataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcact 120  Q
    ||||||||||| ||||||  || ||||||| |||||||  |||||||||||||||||||| |||||||||||| ||||| |||| ||||  |||||||||    
T  31210966 tataatcgcaactttttgtaaagataaggggtcaaaaag-catatttcccttatgttaggaggtcaaaagagcatattttcctaaacatagggggtcact 31210868  T
Q  121 tttgtca 127  Q
    |||||||    
T  31210867 tttgtca 31210861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 90
Target Start/End: Original strand, 12291550 - 12291618
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaag 90  Q
    |||||||||| |||||||||| |||| || |||||| ||||||||||||||||||||||||||||||||    
T  12291550 ataatcgcaactttttgagaagataaagggtcaaaagatcatatttcccttatgttagggggtcaaaag 12291618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 9241823 - 9241743
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttcccta 104  Q
    |||||||||| |||||||||| ||||||| |||||| ||||||||||||||||||||  ||||||||||| | ||||||||||    
T  9241823 ataatcgcaactttttgagaagataaggggtcaaaagatcatatttcccttatgtta--gggtcaaaagaacatatttcccta 9241743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 4597538 - 4597639
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    ||||| |||| ||||||  || ||||||| |||||||| |||||||||||||||||||| |||||||||||| |||||||||| ||||  ||||||| ||    
T  4597538 ataattgcaactttttgtaaagataaggggtcaaaaaa-catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcattt 4597636  T
Q  122 ttg 124  Q
    |||    
T  4597637 ttg 4597639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 124
Target Start/End: Complemental strand, 24051179 - 24051078
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || ||||||| ||||||| | ||||||| ||||||||||| |||||||||||| |||||||||| ||||  ||||||||||    
T  24051179 ataatcgcaactttttgtaaatataaggggtcaaaaagt-atatttctcttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcactt 24051081  T
Q  122 ttg 124  Q
    |||    
T  24051080 ttg 24051078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 26710440 - 26710541
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || ||||||| |||||||| ||||||| |||||||||||| |||||||||||| |||||||||| ||||  |||||| |||    
T  26710440 ataatcgcaactttttgtaaagataaggggtcaaaaaa-catattttccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcgctt 26710538  T
Q  122 ttg 124  Q
    |||    
T  26710539 ttg 26710541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 59 - 124
Target Start/End: Original strand, 2058991 - 2059056
Alignment:
Q  59 atcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcacttttg 124  Q
    ||||||||||||||||||||||| ||||||| ||| |||||||||| |||||| ||||||||||||    
T  2058991 atcatatttcccttatgttagggtgtcaaaatagcatatttccctaaacatgaagggtcacttttg 2059056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 55 - 124
Target Start/End: Complemental strand, 34834064 - 34833995
Alignment:
Q  55 aaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcacttttg 124  Q
    ||||| |||||||||||||||||||| |||||||||||| |||||||||| ||||  |||||||||||||    
T  34834064 aaaaaacatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttg 34833995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 26 - 124
Target Start/End: Complemental strand, 4371065 - 4370968
Alignment:
Q  26 tcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcacttttg 124  Q
    |||||| ||||||  || ||||||| |||||  | |||||||||||||||||||||| |||||||||| |||||||||| |||||  ||||||||||||    
T  4371065 tcgcaactttttgtaaagataaggggtcaaaggagcatatttcccttatgttagggg-tcaaaagagcatatttccctaaacatggagggtcacttttg 4370968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 14572311 - 14572411
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| |||||   || ||||||| |||||||  ||||||||||||||||||||  ||||||||||| |||||||||| |||| |||||||||||    
T  14572311 ataatcgcaactttttataaagataaggggtcaaaaag-catatttcccttatgttaggatgtcaaaagagcatatttccctaaacat-aggggtcactt 14572408  T
Q  122 ttg 124  Q
    |||    
T  14572409 ttg 14572411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 124
Target Start/End: Complemental strand, 25819855 - 25819755
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || ||||||| |||||||  |||||||||||||||||||| ||||| |||||  |||||||||| |||| |||||||||||    
T  25819855 ataatcgcaactttttgtaaagataaggggtcaaaaag-catatttcccttatgttaggaggtcagaagagtatatttccctaaacat-aggggtcactt 25819758  T
Q  122 ttg 124  Q
    |||    
T  25819757 ttg 25819755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 124
Target Start/End: Complemental strand, 32451897 - 32451796
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || ||||||| |||||||  |||||||||||||||||||| |||||||||||| ||||||  || ||||  ||||||||||    
T  32451897 ataatcgcaactttttgtaaagataaggggtcaaaaag-catatttcccttatgttaggaggtcaaaagagcatatttctataaacatagggggtcactt 32451799  T
Q  122 ttg 124  Q
    |||    
T  32451798 ttg 32451796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 127
Target Start/End: Original strand, 19282344 - 19282448
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||| || ||||||| ||||||   |||||||||||||||||||| | |||||| ||| ||||| | || |||| |||||||||||    
T  19282344 ataatcgcaactttttgaaaagataaggggtcaaaatg-catatttcccttatgttaggagttcaaaatagcatatttacttaaacataaggggtcactt 19282442  T
Q  122 ttgtca 127  Q
    ||||||    
T  19282443 ttgtca 19282448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 44 - 124
Target Start/End: Original strand, 32682433 - 32682511
Alignment:
Q  44 ataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcacttttg 124  Q
    ||||||| |||||||| ||||||||| |||||||| | |||||||||||| |||||||||| |||| ||||||||||||||    
T  32682433 ataaggggtcaaaaaa-catatttcctttatgttatgaggtcaaaagagcatatttccctaaacat-aggggtcacttttg 32682511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 61 - 124
Target Start/End: Original strand, 18749299 - 18749362
Alignment:
Q  61 catatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcacttttg 124  Q
    |||||||||||||||||| | |||||||||||| |||||||||| ||||  |||||||||||||    
T  18749299 catatttcccttatgttaagaggtcaaaagagcatatttccctaaacatagggggtcacttttg 18749362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 22 - 89
Target Start/End: Complemental strand, 34528319 - 34528252
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaa 89  Q
    |||||||||| |||||||||| ||||||| |||||| ||||||||||  ||||||||||||| |||||    
T  34528319 ataatcgcaactttttgagaagataaggggtcaaaagatcatatttcatttatgttagggggccaaaa 34528252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 22 - 109
Target Start/End: Original strand, 35102624 - 35102710
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacat 109  Q
    ||||| |||| ||||||  || ||||||| |||||||  |||||||||||||||||||| |||||||||||| |||||||||| ||||    
T  35102624 ataattgcaactttttgtaaagataaggggtcaaaaag-catatttcccttatgttaggaggtcaaaagagcatatttccctaaacat 35102710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 44 - 124
Target Start/End: Complemental strand, 22269555 - 22269478
Alignment:
Q  44 ataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcacttttg 124  Q
    ||||||| |||||||| ||||||||||||||||||  ||||||||||| | |||||||||| |||| ||||||||||||||    
T  22269555 ataaggggtcaaaaaa-catatttcccttatgtta-agggtcaaaagaacatatttccctaaacat-aggggtcacttttg 22269478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 2636948 - 2636888
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggg 82  Q
    |||||||||| ||||||  || ||||||| |||||| | ||||||| ||||||||||||||    
T  2636948 ataatcgcaactttttgtaaaaataaggggtcaaaatagcatatttaccttatgttagggg 2636888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 7e-30; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 22 - 198
Target Start/End: Original strand, 41663656 - 41663832
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| |||||||||| |||| |  ||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||  ||||||||||    
T  41663656 ataatcgcaattttttgagaaaataaagagtcaaaaaatcatatttcccttatgttatggggtcaaaagagcatatttccctaaacat--ggggtcactt 41663753  T
Q  122 ttgtca-nnnnnnncataggaggtcaaaatcgcaac-ttttaaaacttaagaggtgaaaattgccctttagccaataaa 198  Q
    |||| |        | |||| || |||||||||||| |||||||||||||  |||||||| ||| ||||||||||||||    
T  41663754 ttgtaattttttttcttagggggccaaaatcgcaactttttaaaacttaaagggtgaaaaatgcactttagccaataaa 41663832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 13 - 123
Target Start/End: Original strand, 38476593 - 38476703
Alignment:
Q  13 aaaatggttataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgag 112  Q
    |||| ||| |||||||||| |||||||||| ||||||| |||||| |||||||||||||||||||| |||||||||||||| |||||||||| | ||  |    
T  38476593 aaaagggtcataatcgcaactttttgagaagataaggggtcaaaagatcatatttcccttatgttatggggtcaaaagagcatatttccctaaatatagg 38476692  T
Q  113 gggtcactttt 123  Q
    |||||||||||    
T  38476693 gggtcactttt 38476703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 26 - 192
Target Start/End: Complemental strand, 20653987 - 20653820
Alignment:
Q  26 tcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcacttttgt 125  Q
    |||||| |||||||||| ||||| ||| ||||  ||||||||| ||||||||||||| |||||||||| |||||||||| ||||||  ||||||||||||    
T  20653987 tcgcaactttttgagaagataagagataaaaagttcatatttcacttatgttagggg-tcaaaagagcatatttccctaaacatgaaaggtcacttttgt 20653889  T
Q  126 ca-nnnnnnncataggaggtcaaaatcgcaac-ttttaaaacttaagaggtgaaaattgccctttagcc 192  Q
    ||        |||| | ||||||||||||||| |||||||||||||||| |||||| ||| ||||||||    
T  20653888 cattttttttcataaggggtcaaaatcgcaactttttaaaacttaagagatgaaaagtgcactttagcc 20653820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 127
Target Start/End: Original strand, 23040072 - 23040185
Alignment:
Q  13 aaaatggttataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttaggg--ggtcaaaagagcgtatttccctatacatg 110  Q
    |||| ||| |||||||||| |||||||||| ||||||| |||||| |||||||||||||||||||||||  |||||||||||| |||||||||| ||||     
T  23040072 aaaagggtcataatcgcaactttttgagaagataaggggtcaaaagatcatatttcccttatgttaggggaggtcaaaagagcatatttccctaaacat- 23040170  T
Q  111 aggggtcacttttgtca 127  Q
      |||||||||||||||    
T  23040171 --gggtcacttttgtca 23040185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 37961381 - 37961483
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    ||||| |||| ||||||||||  |||||| |||||| ||||| |||||||||||||||| ||||||||||||||||||||||| ||||| ||| ||||||    
T  37961381 ataattgcaactttttgagaagttaaggggtcaaaagatcatttttcccttatgttaggcggtcaaaagagcgtatttccctaaacatgggggatcactt 37961480  T
Q  122 ttg 124  Q
    |||    
T  37961481 ttg 37961483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 123
Target Start/End: Complemental strand, 34125231 - 34125130
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| |||||||||| ||||| | |||||  ||||||||| |||||||||||||| |||||||||| |||||||||| |||||| |||||||||    
T  34125231 ataatcgcaactttttgagaagataagaggtcaaatgatcatattttccttatgttaggggatcaaaagagcatatttccctaaacatgaagggtcactt 34125132  T
Q  122 tt 123  Q
    ||    
T  34125131 tt 34125130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 16901130 - 16901230
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || ||||||| |||||||| |||||||||||||||||||| |||||||||||| |||||||||| |||| |||||||||||    
T  16901130 ataatcgcaactttttgtaaagataaggggtcaaaaaa-catatttcccttatgttaggaggtcaaaagagcatatttccctaaacat-aggggtcactt 16901227  T
Q  122 ttg 124  Q
    |||    
T  16901228 ttg 16901230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 25557008 - 25557109
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    ||||| |||| ||||||  || ||||||| |||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||  ||||||||||    
T  25557008 ataattgcaactttttgtaaagataaggggtcaaaaaa-catatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcactt 25557106  T
Q  122 ttg 124  Q
    |||    
T  25557107 ttg 25557109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 31055447 - 31055548
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || ||||||| |||||||| |||||||||||||||||| |||||||||||||| |||||||||| ||||  ||||||||||    
T  31055447 ataatcgcaattttttgtaaagataaggggtcaaaaaa-catatttcccttatgttaaggggtcaaaagagcatatttccctaaacatagggggtcactt 31055545  T
Q  122 ttg 124  Q
    |||    
T  31055546 ttg 31055548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 22 - 124
Target Start/End: Complemental strand, 245765 - 245665
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || ||||||| |||||||  |||||||||||||||||||| |||||||||||| |||||||||| |||| |||||||||||    
T  245765 ataatcgcaactttttgtaaagataaggggtcaaaaag-catatttcccttatgttaggaggtcaaaagagcatatttccctaaacat-aggggtcactt 245668  T
Q  122 ttg 124  Q
    |||    
T  245667 ttg 245665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 22 - 124
Target Start/End: Complemental strand, 18695174 - 18695074
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || ||||||| |||||||  |||||||||||||||||||| |||||||||||| |||||||||| |||| |||||||||||    
T  18695174 ataatcgcaactttttgtaaagataaggggtcaaaaag-catatttcccttatgttaggaggtcaaaagagcatatttccctaaacat-aggggtcactt 18695077  T
Q  122 ttg 124  Q
    |||    
T  18695076 ttg 18695074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 22 - 127
Target Start/End: Original strand, 17825630 - 17825734
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||| || |||| || |||||| | |||||||| ||||||||||||| |||||||||| |||||||||| |||||||| ||||| |    
T  17825630 ataatcgcaactttttgacaagataaagggtcaaaagaacatatttctcttatgttagggg-tcaaaagagcatatttccctaaacatgaggtgtcacat 17825728  T
Q  122 ttgtca 127  Q
    ||||||    
T  17825729 ttgtca 17825734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 123
Target Start/End: Original strand, 23765523 - 23765622
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || ||||  |||||||||  |||||||||||||||||||| |||||||||||| |||||||||| |||| |||||||||||    
T  23765523 ataatcgcaactttttgtaaagataaatgatcaaaaag-catatttcccttatgttaggaggtcaaaagagcatatttccctaaacat-aggggtcactt 23765620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 123
Target Start/End: Original strand, 23815371 - 23815470
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || ||||  |||||||||  |||||||||||||||||||| |||||||||||| |||||||||| |||| |||||||||||    
T  23815371 ataatcgcaactttttgtaaagataaatgatcaaaaag-catatttcccttatgttaggaggtcaaaagagcatatttccctaaacat-aggggtcactt 23815468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 194
Target Start/End: Original strand, 35302047 - 35302219
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaa-atcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcact 120  Q
    |||||||||  ||||| |||| ||||||| ||||||| ||||||||| | ||||||||||||||||||||||| |||||||||| | ||| |||||||||    
T  35302047 ataatcgcagcttttttagaagataaggg-tcaaaaagatcatatttacattatgttagggggtcaaaagagcatatttccctaaatatg-ggggtcact 35302144  T
Q  121 tttgtcannnnnnncataggaggtcaaaatcgcaac-ttttaaaacttaagaggtgaaaattgccctttagccaa 194  Q
    |||| ||        ||||  ||||||||||||||| |||| ||||||||| || ||||| |||  |||||||||    
T  35302145 tttgccatttttataatagagggtcaaaatcgcaacattttgaaacttaaggggagaaaaatgcagtttagccaa 35302219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 22 - 126
Target Start/End: Complemental strand, 2373316 - 2373213
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| |||||||||| ||||||| ||| || ||||||||||||||||||||  ||||||||||||| ||||| | || ||||  |||||||| |    
T  2373316 ataatcgcaaatttttgagaaaataaggggtcataatatcatatttcccttatgtta-tgggtcaaaagagcatattttcttaaacatagggggtcacgt 2373218  T
Q  122 ttgtc 126  Q
    |||||    
T  2373217 ttgtc 2373213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 56 - 124
Target Start/End: Complemental strand, 8645935 - 8645867
Alignment:
Q  56 aaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcacttttg 124  Q
    ||||||||||||||||||||||||| |||||||||||| |||||||||| ||||  ||||||| |||||    
T  8645935 aaaatcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacattgggggtcaattttg 8645867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 61 - 124
Target Start/End: Original strand, 26639208 - 26639271
Alignment:
Q  61 catatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcacttttg 124  Q
    |||||||||||||||||||| |||||||||||| |||||||||| ||||  |||||||||||||    
T  26639208 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatatggggtcacttttg 26639271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 10293220 - 10293321
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || ||||||  |||||||| |||||||||||||||||||| |||||||||||| |||||||| | ||||  ||||||| ||    
T  10293220 ataatcgcaactttttggaaagataaggagtcaaaaaa-catatttcccttatgttaggaggtcaaaagagcatatttcccaaaacatagggggtcattt 10293318  T
Q  122 ttg 124  Q
    |||    
T  10293319 ttg 10293321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 124
Target Start/End: Complemental strand, 10379452 - 10379352
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || ||||||| |||||||| |||||||||||||||||| |||||||||||||| ||||| |||| ||||  | ||||||||    
T  10379452 ataatcgcaactttttgtaaagataaggggtcaaaaaa-catatttcccttatgtta-ggggtcaaaagagcatattttcctaaacataggaggtcactt 10379355  T
Q  122 ttg 124  Q
    |||    
T  10379354 ttg 10379352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 16307609 - 16307711
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggg-gtcaaaagagcgtatttccctatacatgaggggtcact 120  Q
    ||||| |||| ||||||  || ||||||  |||||||| ||||||| |||||||||||||| ||||||||||| |||||||||| ||||  |||||||||    
T  16307609 ataattgcaactttttgtaaagataaggagtcaaaaaa-catattttccttatgttaggggggtcaaaagagcatatttccctaaacatagggggtcact 16307707  T
Q  121 tttg 124  Q
    ||||    
T  16307708 tttg 16307711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 47 - 192
Target Start/End: Original strand, 23040196 - 23040340
Alignment:
Q  47 agggatcaaaaaatcatatttcccttatgtta-gggggtcaaaagagcgtatttccctatacatgaggggtcacttttgtcannnnnnncataggaggtc 145  Q
    |||| ||||||  ||||||||||||||||||| ||||||||||||||| |||||||||| | ||  |||||||||||||||         ||||| ||||    
T  23040196 aggggtcaaaaggtcatatttcccttatgttaggggggtcaaaagagcatatttccctaaatat--ggggtcacttttgtctttttttttatagg-ggtc 23040292  T
Q  146 aaaatcgcaac-ttttaaaacttaagaggtgaaaattgccctttagcc 192  Q
    ||||||||||| |||||||||||||| | |||||| ||  ||||||||    
T  23040293 aaaatcgcaactttttaaaacttaagggatgaaaagtgtactttagcc 23040340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 124
Target Start/End: Complemental strand, 38408799 - 38408699
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    ||||| |||| ||||||  || ||||||| |||||||| ||||||||||||||||||| || |||||||||| |||||| ||| ||||  ||||||||||    
T  38408799 ataatagcaactttttgtaaagataaggggtcaaaaaa-catatttcccttatgttagtgg-tcaaaagagcatatttctctaaacatagggggtcactt 38408702  T
Q  122 ttg 124  Q
    |||    
T  38408701 ttg 38408699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 40428772 - 40428853
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttcccta 104  Q
    |||||||||| ||||||  || ||||||| |||||||  |||||||||||||||||||| |||||||||| | ||||||||||    
T  40428772 ataatcgcaattttttgtaaagataaggggtcaaaaag-catatttcccttatgttaggaggtcaaaagaacatatttcccta 40428853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 124
Target Start/End: Complemental strand, 36641282 - 36641213
Alignment:
Q  55 aaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcacttttg 124  Q
    ||||| |||||||||||||||||||| |||||||||||| |||||| ||| ||||  ||| |||||||||    
T  36641282 aaaaagcatatttcccttatgttaggaggtcaaaagagcatatttctctaaacataggggctcacttttg 36641213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 124
Target Start/End: Complemental strand, 31648174 - 31648125
Alignment:
Q  75 gttagggggtcaaaagagcgtatttccctatacatgaggggtcacttttg 124  Q
    ||||||||||||||| ||| |||||||||| |||| ||||||||||||||    
T  31648174 gttagggggtcaaaaaagcatatttccctaaacataaggggtcacttttg 31648125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 124
Target Start/End: Complemental strand, 19169514 - 19169413
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    ||||| |||| ||||||  || ||||||| |||||||  |||||||||||||||||| | ||||||| |||| ||||| |||| ||||  ||| ||||||    
T  19169514 ataattgcaactttttgtaaagataaggggtcaaaaag-catatttcccttatgttaagaggtcaaatgagcatattttcctaaacataggggatcactt 19169416  T
Q  122 ttg 124  Q
    |||    
T  19169415 ttg 19169413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 192
Target Start/End: Original strand, 38476723 - 38476781
Alignment:
Q  135 cataggaggtcaaaatcgcaactttt-aaaacttaagaggtgaaaattgccctttagcc 192  Q
    |||||| |||||||||| |||||||| |||||||||| |||||||| ||| ||||||||    
T  38476723 catagggggtcaaaatcacaactttttaaaacttaaggggtgaaaagtgcactttagcc 38476781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 110
Target Start/End: Complemental strand, 7187322 - 7187273
Alignment:
Q  61 catatttcccttatgttagggggtcaaaagagcgtatttccctatacatg 110  Q
    ||||||||||||||||||| |||||||||||   |||||||||| |||||    
T  7187322 catatttcccttatgttagagggtcaaaagaatatatttccctaaacatg 7187273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 109
Target Start/End: Complemental strand, 7835858 - 7835795
Alignment:
Q  44 ataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacat 109  Q
    ||||||| |||||||| ||||||| |||||||||| ||| |||||||||| |||||||||| ||||    
T  7835858 ataaggggtcaaaaaa-catattttccttatgttatggg-tcaaaagagcatatttccctaaacat 7835795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 192
Target Start/End: Original strand, 31576606 - 31576663
Alignment:
Q  136 ataggaggtcaaaatcgcaactttt-aaaacttaagaggtgaaaattgccctttagcc 192  Q
    ||||| || |||||||||||||||| |||||||||| |||||||| ||| ||||||||    
T  31576606 atagggggacaaaatcgcaactttttaaaacttaaggggtgaaaagtgcactttagcc 31576663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 2e-27; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 13 - 127
Target Start/End: Original strand, 4455166 - 4455280
Alignment:
Q  13 aaaatggttataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgag 112  Q
    |||||||  |||||||||| |||||||||| ||||| | ||||||||||||||||||||||||||| |||||||||||||| ||||| |||| ||||  |    
T  4455166 aaaatggccataatcgcaactttttgagaagataagtggtcaaaaaatcatatttcccttatgttacggggtcaaaagagcatattttcctaaacattgg 4455265  T
Q  113 gggtcacttttgtca 127  Q
    || ||||||||||||    
T  4455266 ggatcacttttgtca 4455280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 22 - 123
Target Start/End: Original strand, 18606816 - 18606917
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||| ||| |||||||||| ||||||| |||||| ||| ||||| |||||||||| |||||||||||||| |||||||||| ||||||||||||||||    
T  18606816 ataatcacaactttttgagaagataaggggtcaaaagatcgtattttccttatgttatggggtcaaaagagcatatttccctaaacatgaggggtcactt 18606915  T
Q  122 tt 123  Q
    ||    
T  18606916 tt 18606917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 22 - 127
Target Start/End: Original strand, 29182133 - 29182237
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||| |||||| ||||||| |||||| |||||||||||||||||||| |||||||||||||| |||||| ||| |||| |||||||||||    
T  29182133 ataatcgcaactttatgagaagataaggggtcaaaagatcatatttcccttatgtta-ggggtcaaaagagcatatttctctaaacataaggggtcactt 29182231  T
Q  122 ttgtca 127  Q
    ||||||    
T  29182232 ttgtca 29182237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 16551776 - 16551878
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| |||||||||| ||||||| |||||| |||||||||  || ||||||||||||||||||||| |||||||||| ||||  ||||||||||    
T  16551776 ataatcgcaactttttgagaagataaggggtcaaaagatcatatttgtctgatgttagggggtcaaaagagcatatttccctaaacattgggggtcactt 16551875  T
Q  122 ttg 124  Q
    |||    
T  16551876 ttg 16551878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 46432349 - 46432450
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || ||||||| |||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||  ||||||||||    
T  46432349 ataatcgcaactttttgtaaagataaggggtcaaaaaa-catatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcactt 46432447  T
Q  122 ttg 124  Q
    |||    
T  46432448 ttg 46432450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 46 - 127
Target Start/End: Complemental strand, 21148126 - 21148045
Alignment:
Q  46 aagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcacttttgtca 127  Q
    ||||| |||||| ||||||||||||||||||||||||||||||||||| |||||||||| ||||  ||||||||||||||||    
T  21148126 aaggggtcaaaagatcatatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttgtca 21148045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 19078058 - 19078158
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || ||||||| |||||||| |||||||||||||||||||| |||||||||||| |||||||||| |||| |||||||||||    
T  19078058 ataatcgcaactttttgtaaagataaggggtcaaaaaa-catatttcccttatgttaggaggtcaaaagagcatatttccctaaacat-aggggtcactt 19078155  T
Q  122 ttg 124  Q
    |||    
T  19078156 ttg 19078158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 19125948 - 19126048
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || ||||||| |||||||| |||||||||||||||||||| |||||||||||| |||||||||| |||| |||||||||||    
T  19125948 ataatcgcaactttttgtaaagataaggggtcaaaaaa-catatttcccttatgttaggaggtcaaaagagcatatttccctaaacat-aggggtcactt 19126045  T
Q  122 ttg 124  Q
    |||    
T  19126046 ttg 19126048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 24 - 191
Target Start/End: Original strand, 2260513 - 2260677
Alignment:
Q  24 aatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactttt 123  Q
    |||||||| |||||||||| ||||||| | |||| |||||||||||||||| ||| |||||||||| ||| |||||| ||| ||||  ||||||||||||    
T  2260513 aatcgcaactttttgagaagataaggggttaaaatatcatatttcccttatattatggggtcaaaaaagcatatttcactaaacat--ggggtcactttt 2260610  T
Q  124 gtcannnnnnncataggaggtcaaaatcgcaac-ttttaaaacttaagaggtgaaaattgccctttagc 191  Q
    ||||       |||||| | ||||||||||||| |||||||||||||| | |||||| ||| |||||||    
T  2260611 gtca-ttttttcatagg-gatcaaaatcgcaactttttaaaacttaagggatgaaaagtgcactttagc 2260677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 22 - 124
Target Start/End: Complemental strand, 24962124 - 24962023
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || ||||||| |||||||  |||||||||||||||||||| |||||||||||| |||||||||| ||||  ||||||||||    
T  24962124 ataatcgcaactttttgtaaagataaggggtcaaaaag-catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcactt 24962026  T
Q  122 ttg 124  Q
    |||    
T  24962025 ttg 24962023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 197
Target Start/End: Complemental strand, 21185384 - 21185203
Alignment:
Q  13 aaaatggttataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgag 112  Q
    |||| ||| |||||||||| |||||||||| ||| ||| |||||| ||||||||| | |||||||| ||| |||||||| | |||||||||| |||||      
T  21185384 aaaagggtcataatcgcaactttttgagaagatagggggtcaaaagatcatattttc-ttatgttaaggg-tcaaaagaacatatttccctaaacatg-- 21185289  T
Q  113 gggtcacttttgtcannnnnnncataggaggtcaaaatcgcaactttt-aaaacttaagaggtgaaaattgccctttagccaataa 197  Q
    ||||||||||| |||       ||||||||| ||||| |||||||||| |||||||||| | |||||| ||| |||||||| ||||    
T  21185288 gggtcacttttatcatttttttcataggaggccaaaagcgcaactttttaaaacttaagggatgaaaaatgcactttagcctataa 21185203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 124
Target Start/End: Complemental strand, 9387865 - 9387763
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttag-ggggtcaaaagagcgtatttccctatacatgaggggtcact 120  Q
    |||||||||| |||||||||| |||| || |||||| || |||||||||||||||||| |||||||||||||| ||||||| || ||||| ||||| |||    
T  9387865 ataatcgcaaatttttgagaagataaagggtcaaaagattatatttcccttatgttaggggggtcaaaagagcatatttccttaaacatg-ggggttact 9387767  T
Q  121 tttg 124  Q
    ||||    
T  9387766 tttg 9387763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 51719255 - 51719355
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || ||||||| | |||||  ||||||| |||||||||||||| |||||||||| |||||||||| |||| |||||||||||    
T  51719255 ataatcgcaactttttgtaaagataaggggtaaaaaa--catattttccttatgttaggggatcaaaagagcatatttccctaaacataaggggtcactt 51719352  T
Q  122 ttg 124  Q
    |||    
T  51719353 ttg 51719355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 124
Target Start/End: Complemental strand, 2425395 - 2425295
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || ||||||| | |||||| ||||||||||||||||||| ||||||||||||| || ||||||| |||| |||||||||||    
T  2425395 ataatcgcaactttttgtaaagataagggttaaaaaaaacatatttcccttatgttagagggtcaaaagagcata-ttccctaaacat-aggggtcactt 2425298  T
Q  122 ttg 124  Q
    |||    
T  2425297 ttg 2425295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 4059655 - 4059756
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || ||||||| |||||||| ||||||| |||||||||||| |||||||||||| |||||||||| ||||   |||||||||    
T  4059655 ataatcgcaactttttgtaaagataaggggtcaaaaaa-catattttccttatgttaggaggtcaaaagagcatatttccctaaacatagagggtcactt 4059753  T
Q  122 ttg 124  Q
    |||    
T  4059754 ttg 4059756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 124
Target Start/End: Complemental strand, 24749969 - 24749868
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || ||||||| |||||||  |||||||||||||||||| | |||||||||||| |||||||||| ||||  ||||||||||    
T  24749969 ataatcgcaactttttgtaaagataaggggtcaaaaag-catatttcccttatgttatgaggtcaaaagagcatatttccctaaacatagggggtcactt 24749871  T
Q  122 ttg 124  Q
    |||    
T  24749870 ttg 24749868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 43706787 - 43706887
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || ||||||| |||||||| |||||||||||||||||| ||| |||||||||| |||||||||| ||||  ||||||||||    
T  43706787 ataatcgcaactttttgtaaagataaggggtcaaaaaa-catatttcccttatgttatggg-tcaaaagagcatatttccctaaacatagggggtcactt 43706884  T
Q  122 ttg 124  Q
    |||    
T  43706885 ttg 43706887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 33 - 124
Target Start/End: Complemental strand, 22786190 - 22786100
Alignment:
Q  33 tttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcacttttg 124  Q
    |||||||||| ||||||| |||||| |||||||||| ||||||||||  | |||||||||| |||||||||| ||||| ||| |||||||||    
T  22786190 tttttgagaagataaggggtcaaaagatcatatttcacttatgttagatg-tcaaaagagcatatttccctaaacatgggggctcacttttg 22786100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 124
Target Start/End: Complemental strand, 3616970 - 3616869
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || ||||||| |||||||| |||||||||||||||| | | |||||||||||| |||||||||| ||||  | ||||||||    
T  3616970 ataatcgcaactttttgtaaagataaggggtcaaaaaa-catatttcccttatgtgaagaggtcaaaagagcatatttccctaaacataggaggtcactt 3616872  T
Q  122 ttg 124  Q
    |||    
T  3616871 ttg 3616869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 26 - 124
Target Start/End: Complemental strand, 24196428 - 24196331
Alignment:
Q  26 tcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcacttttg 124  Q
    |||||| ||||||  || ||||||| |||||||  |||||||||||||||||||| |||||||||||| |||||| ||| ||||  |||||||||||||    
T  24196428 tcgcaactttttgtaaagataaggggtcaaaaag-catatttcccttatgttaggaggtcaaaagagcatatttctctaaacatatggggtcacttttg 24196331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 48471996 - 48472097
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || ||||||| |||||||  |||||||| ||||||||||| |||||||||||| |||||||||| ||||  ||||||| ||    
T  48471996 ataatcgcaactttttgtaaagataaggggtcaaaaag-catatttctcttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcaatt 48472094  T
Q  122 ttg 124  Q
    |||    
T  48472095 ttg 48472097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 10684970 - 10684882
Alignment:
Q  17 tggttataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttag-ggggtcaaaagagcgtatttcccta 104  Q
    |||| |||||||||| |||||||||| ||||||| |||||| |||||||||  |||||||||| |||||||| ||||  ||||||||||    
T  10684970 tggtgataatcgcaactttttgagaagataaggggtcaaaagatcatatttttcttatgttaggggggtcaatagagtatatttcccta 10684882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 110
Target Start/End: Complemental strand, 16972022 - 16971934
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatg 110  Q
    ||||||||||  ||||||||| |||| |  ||||||  |||||||||||||||||||||||||| ||||||| ||| |||||| |||||    
T  16972022 ataatcgcaatattttgagaagataaagagtcaaaaggtcatatttcccttatgttagggggtctaaagagcatatatccctaaacatg 16971934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 68 - 124
Target Start/End: Complemental strand, 28750403 - 28750347
Alignment:
Q  68 cccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcacttttg 124  Q
    |||||||||||| ||||||||||||| |||||  ||| |||||||||||||||||||    
T  28750403 cccttatgttagagggtcaaaagagcatatttttctaaacatgaggggtcacttttg 28750347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 124
Target Start/End: Original strand, 2657636 - 2657746
Alignment:
Q  13 aaaatggttataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgag 112  Q
    |||| ||| |||||| ||| ||||| | || ||||||| |||||| | ||||||||| |||||||||| |||||| ||||| |||||||||| ||||  |    
T  2657636 aaaagggtcataatcacaacttttttaaaagataaggggtcaaaagagcatatttcc-ttatgttaggcggtcaatagagcatatttccctaaacatagg 2657734  T
Q  113 gggtcacttttg 124  Q
    | ||||||||||    
T  2657735 gagtcacttttg 2657746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 27092985 - 27093066
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttcccta 104  Q
    ||||| |||| ||||||  || ||||||| |||||||| |||||||| | ||| |||||||||||||||||| ||||||||||    
T  27092985 ataattgcaactttttgtaaagataaggggtcaaaaaa-catatttcacatatattagggggtcaaaagagcatatttcccta 27093066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 124
Target Start/End: Original strand, 28920832 - 28920885
Alignment:
Q  71 ttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcacttttg 124  Q
    |||||||||| |||||||||||| |||||||||| ||||  |||||||||||||    
T  28920832 ttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttg 28920885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 124
Target Start/End: Complemental strand, 29676250 - 29676149
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| |||||   || ||||||| |||||||  |||||||| ||||||||||| | ||| |||||| |||||||||| ||||  ||| ||||||    
T  29676250 ataatcgcaactttttataaagataaggggtcaaaaag-catatttcacttatgttaggagatcacaagagcatatttccctaaacataggggatcactt 29676152  T
Q  122 ttg 124  Q
    |||    
T  29676151 ttg 29676149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 110
Target Start/End: Complemental strand, 47685249 - 47685185
Alignment:
Q  45 taagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatg 110  Q
    |||||| |||||||| ||||||| |||||||||||||| |||||| ||| ||||||| || |||||    
T  47685249 taaggggtcaaaaaa-catattttccttatgttaggggatcaaaatagcatatttccttaaacatg 47685185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 4e-25; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 23428752 - 23428853
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || ||||||| |||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||  ||||||||||    
T  23428752 ataatcgcaactttttgtaaagataaggggtcaaaaaa-catatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcactt 23428850  T
Q  122 ttg 124  Q
    |||    
T  23428851 ttg 23428853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 124
Target Start/End: Complemental strand, 4776022 - 4775921
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||| |||| |||||||||||||  |||||||||||| ||||| |||||||||||| ||| |||||||||| ||||| ||||||||||    
T  4776022 ataatcgcaactttttaagaagataagggatcaaaggatcatatttcccgtatgtgagggggtcaaaatagcatatttccctaaacatg-ggggtcactt 4775924  T
Q  122 ttg 124  Q
    |||    
T  4775923 ttg 4775921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 26 - 124
Target Start/End: Complemental strand, 20001876 - 20001779
Alignment:
Q  26 tcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcacttttg 124  Q
    |||||| |||||||||| |||||||  ||| | ||||||||||||||||||||||||||||||||||| |||||||||| ||||  |||||||||||||    
T  20001876 tcgcaactttttgagaatataagggg-caagagatcatatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttg 20001779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 22 - 109
Target Start/End: Original strand, 28173862 - 28173948
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacat 109  Q
    |||||||||| ||||||  || ||||||| |||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  28173862 ataatcgcaactttttgtaaagataaggggtcaaaaaa-catatttcccttatgttagggggtcaaaagagcatatttccctaaacat 28173948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 22500728 - 22500829
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || |||||||||||||||  |||||||||||||||||||| |||||||||||| ||||| |||| ||||  ||||||||||    
T  22500728 ataatcgcaactttttgtaaatataagggatcaaaaag-catatttcccttatgttaggaggtcaaaagagcatattttcctaaacatagggggtcactt 22500826  T
Q  122 ttg 124  Q
    |||    
T  22500827 ttg 22500829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 25022796 - 25022897
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || ||||||| |||||||| ||||| |||||||||||| |||||||||||||| |||||||||| ||||  ||||||||||    
T  25022796 ataatcgcaactttttgtaaagataagggttcaaaaaa-catatatcccttatgttatggggtcaaaagagcatatttccctaaacatagggggtcactt 25022894  T
Q  122 ttg 124  Q
    |||    
T  25022895 ttg 25022897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 26628158 - 26628259
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || ||||||| |||||||  |||||||||||||||||||| |||||||||||| |||||||||| ||||  ||||||||||    
T  26628158 ataatcgcaactttttgtaaagataaggggtcaaaaag-catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcactt 26628256  T
Q  122 ttg 124  Q
    |||    
T  26628257 ttg 26628259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 27852884 - 27852985
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || ||||||| |||||||  |||||||||||||||||||| |||||||||||| |||||||||| ||||  ||||||||||    
T  27852884 ataatcgcaactttttgtaaagataaggggtcaaaaag-catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcactt 27852982  T
Q  122 ttg 124  Q
    |||    
T  27852983 ttg 27852985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 30155278 - 30155379
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || ||||||| |||||||| |||||||||||||||||||| |||||||||||| |||||||||| ||||  ||| ||||||    
T  30155278 ataatcgcaactttttgtaaagataaggggtcaaaaaa-catatttcccttatgttaggaggtcaaaagagcatatttccctaaacataggggatcactt 30155376  T
Q  122 ttg 124  Q
    |||    
T  30155377 ttg 30155379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 124
Target Start/End: Complemental strand, 4522125 - 4522024
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || ||||||| |||||||  |||||||||||||||||| | |||||||||||| |||||||||| ||||  ||||||||||    
T  4522125 ataatcgcaactttttgtaaagataaggggtcaaaaag-catatttcccttatgttaagaggtcaaaagagcatatttccctaaacatatggggtcactt 4522027  T
Q  122 ttg 124  Q
    |||    
T  4522026 ttg 4522024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 124
Target Start/End: Complemental strand, 8542781 - 8542680
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    ||||| |||| ||||||  || ||||||| |||||||  |||||||||||||||||||| |||||||||||| |||||||||| ||||  ||||||||||    
T  8542781 ataattgcaactttttgtaaagataaggggtcaaaaag-catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcactt 8542683  T
Q  122 ttg 124  Q
    |||    
T  8542682 ttg 8542680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 168
Target Start/End: Complemental strand, 10743578 - 10743433
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || ||||||| |||||||| |||||||||||||||||||||| | |||||||| |||||||||| ||||  || |||||||    
T  10743578 ataatcgcaactttttgtaaagataaggggtcaaaaaa-catatttcccttatgttaggggtt-aaaagagcatatttccctaaacatagggagtcactt 10743481  T
Q  122 ttgtcannnnnnncataggaggtcaaaatcgcaac-ttttaaaactta 168  Q
    ||||||        ||||| || |||||||||||| ||||||||||||    
T  10743480 ttgtcatttttttaatagggggccaaaatcgcaacattttaaaactta 10743433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 124
Target Start/End: Complemental strand, 25179749 - 25179648
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || ||||||| |||||||| |||||||| |||| |||||| |||||||||||| |||||||||| ||||  ||||||||||    
T  25179749 ataatcgcaactttttgtaaagataaggggtcaaaaaa-catatttctcttacgttaggaggtcaaaagagcatatttccctaaacatagggggtcactt 25179651  T
Q  122 ttg 124  Q
    |||    
T  25179650 ttg 25179648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 44 - 114
Target Start/End: Original strand, 33279739 - 33279809
Alignment:
Q  44 ataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggg 114  Q
    |||||||||||||| | ||||||||||||||||||||||||||||||||| ||||| |||| ||| |||||    
T  33279739 ataagggatcaaaagagcatatttcccttatgttagggggtcaaaagagcatattttcctaaacaagaggg 33279809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 44 - 193
Target Start/End: Original strand, 46673203 - 46673351
Alignment:
Q  44 ataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcacttttgtcannnnnnncataggagg 143  Q
    ||||||| |||||||  ||||||||||||||||||||| ||||||||||| |||||||||| ||||  ||| ||||||||| ||        ||||| ||    
T  46673203 ataaggggtcaaaaa--catatttcccttatgttagggagtcaaaagagcatatttccctaaacataggggatcacttttgccatttttttaataggggg 46673300  T
Q  144 tcaaaatcgcaac-ttttaaaacttaagaggtgaaaattgccctttagcca 193  Q
    ||||||||||||| ||| |||||||||| || ||||| ||  |||||||||    
T  46673301 tcaaaatcgcaacatttgaaaacttaaggggcgaaaagtggactttagcca 46673351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 48907425 - 48907526
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| |||||   || ||||||| |||||||  |||||||||||||||||||| |||||||||||| |||||||||| ||||  ||||||||||    
T  48907425 ataatcgcaactttttttaaagataaggggtcaaaaag-catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcactt 48907523  T
Q  122 ttg 124  Q
    |||    
T  48907524 ttg 48907526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 123
Target Start/End: Complemental strand, 48860873 - 48860773
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || ||||||| |||||||| |||||||||||||||||||  |||||||| ||| |||||||||| |||| |||||||| ||    
T  48860873 ataatcgcaactttttgtaaagataaggggtcaaaaaa-catatttcccttatgttagaaggtcaaaatagcatatttccctaaacataaggggtcattt 48860775  T
Q  122 tt 123  Q
    ||    
T  48860774 tt 48860773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 22 - 192
Target Start/End: Original strand, 26633492 - 26633659
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || ||||||| |||||||| |||||||| ||||||||||||| |||||||||| |||||||||| | ||  ||||||| ||    
T  26633492 ataatcgcaactttttgtaaagataaggggtcaaaaaa-catatttctcttatgttagggg-tcaaaagagcatatttccctaaagat--ggggtcattt 26633587  T
Q  122 ttgtcannnnnnncataggaggtcaaaatcgcaactttta-aaacttaagaggtgaaaattgccctttagcc 192  Q
    ||| ||        ||||| ||||||||||||||| |||| ||||||| | |||||||| |||| |||||||    
T  26633588 ttgccatttttttaatagggggtcaaaatcgcaacatttagaaacttagggggtgaaaagtgccgtttagcc 26633659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 33 - 127
Target Start/End: Complemental strand, 32315080 - 32314988
Alignment:
Q  33 tttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcacttttgtca 127  Q
    |||||||| | ||||||| |||||| || |||||||||| ||||||||||||||||||| | |||||||||| ||||  || |||||||||||||    
T  32315080 tttttgaggagataaggggtcaaaatataatatttccctcatgttagggggtcaaaagaacatatttccctaaacat--ggagtcacttttgtca 32314988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 8339073 - 8339174
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || ||||||| |||||||  ||||||||  |||||||||| |||||||| ||| |||||||||| |||| |||||||||||    
T  8339073 ataatcgcaactttttgtaaagataaggggtcaaaaag-catatttctattatgttaggaggtcaaaaaagcatatttccctaaacataaggggtcactt 8339171  T
Q  122 ttg 124  Q
    |||    
T  8339172 ttg 8339174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 124
Target Start/End: Complemental strand, 13081065 - 13080964
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || ||||||| |||||||  |||||||||||||||||| | |||||||||||| |||||||||| | ||  ||||||||||    
T  13081065 ataatcgcaactttttgtaaagataaggggtcaaaaag-catatttcccttatgttatgaggtcaaaagagcatatttccctaaatatagggggtcactt 13080967  T
Q  122 ttg 124  Q
    |||    
T  13080966 ttg 13080964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 25336527 - 25336445
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttcccta 104  Q
    |||||||||| ||||||||||  |||  | ||||||  |||||||||||||||||||||||||||||||||| || |||||||    
T  25336527 ataatcgcaactttttgagaagttaaaaggtcaaaaggtcatatttcccttatgttagggggtcaaaagagcataattcccta 25336445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 114
Target Start/End: Complemental strand, 1743417 - 1743329
Alignment:
Q  25 atcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggg 114  Q
    ||||||| |||||||||| ||||||| |||||| |||| |||||| ||||||||||||||||||||||  ||||| |||| |||| ||||    
T  1743417 atcgcaactttttgagaagataaggggtcaaaagatcacatttcc-ttatgttagggggtcaaaagagtatattttcctaaacatcaggg 1743329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 123
Target Start/End: Original strand, 3328946 - 3329046
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || ||||||| ||||||   |||||||||||||||||||| |||||||||||| |||||||||| || |  ||||||||||    
T  3328946 ataatcgcaactttttgtaaagataaggggtcaaaagg-catatttcccttatgttaggaggtcaaaagagcatatttccctaaacttagggggtcactt 3329044  T
Q  122 tt 123  Q
    ||    
T  3329045 tt 3329046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 22447909 - 22447978
Alignment:
Q  55 aaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcacttttg 124  Q
    ||||| |||||||||||||||||||| |||||||||||| |||||||||| ||||  | |||||||||||    
T  22447909 aaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacataggaggtcacttttg 22447978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 44 - 124
Target Start/End: Original strand, 40836334 - 40836411
Alignment:
Q  44 ataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcacttttg 124  Q
    ||||||| |||||||| |||||||||||||| |||||||||||||||| | |||||||||| ||||  |||||||||||||    
T  40836334 ataaggggtcaaaaaa-catatttcccttatattagggggtcaaaagaacatatttccctaaacat--ggggtcacttttg 40836411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 44 - 104
Target Start/End: Original strand, 34878684 - 34878743
Alignment:
Q  44 ataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttcccta 104  Q
    |||||||||||||||  |||||||||||||| |||||||||||||||||| ||||||||||    
T  34878684 ataagggatcaaaaag-catatttcccttatattagggggtcaaaagagcatatttcccta 34878743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 33 - 124
Target Start/End: Original strand, 35201139 - 35201228
Alignment:
Q  33 tttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcacttttg 124  Q
    |||||||||| ||||||| |||||| ||||||||||| ||||||||  ||||||||||||| | |||||| | ||||| ||||||| |||||    
T  35201139 tttttgagaagataaggggtcaaaatatcatatttcctttatgtta--gggtcaaaagagcatgtttcccaaaacatgtggggtcatttttg 35201228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 22 - 181
Target Start/End: Complemental strand, 23320532 - 23320378
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    ||||| |||| |||||||||| |||||   |||| | |||| | ||| ||||||||||||| |||||||||| |||||||||| ||||  ||| ||||||    
T  23320532 ataatagcaactttttgagaagataagaagtcaatatatcagacttctcttatgttagggg-tcaaaagagcatatttccctaaacat--gggatcactt 23320436  T
Q  122 ttgtcannnnnnncataggaggtcaaaatcgcaac-ttttaaaacttaagaggtgaaaatt 181  Q
    ||||||       |||||| ||||||||||||||| |||||||||||||| ||||||||||    
T  23320435 ttgtca--tttttcatagg-ggtcaaaatcgcaactttttaaaacttaaggggtgaaaatt 23320378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 22 - 109
Target Start/End: Original strand, 28155015 - 28155101
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacat 109  Q
    |||||||||| ||||||  || ||||| | |||||||  |||||||||||||||||||| |||||||||||| |||||||||| ||||    
T  28155015 ataatcgcaactttttgtaaagataagaggtcaaaaag-catatttcccttatgttaggaggtcaaaagagcatatttccctaaacat 28155101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 124
Target Start/End: Complemental strand, 3781017 - 3780951
Alignment:
Q  55 aaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcacttttg 124  Q
    ||||| |||||||||||||||||| |||||||||||||| |||||||||| ||||  |||||||||||||    
T  3781017 aaaaagcatatttcccttatgtta-ggggtcaaaagagcatatttccctaaacat--ggggtcacttttg 3780951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 45 - 127
Target Start/End: Original strand, 18388855 - 18388936
Alignment:
Q  45 taagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcacttttgtca 127  Q
    |||||||||| || | |||||||  |||||| ||||||||||||||||| |||||||||  ||||| ||||||||||||||||    
T  18388855 taagggatcagaagaacatatttatcttatggtagggggtcaaaagagcatatttcccttaacatg-ggggtcacttttgtca 18388936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 124
Target Start/End: Complemental strand, 36311321 - 36311222
Alignment:
Q  23 taatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcacttt 122  Q
    ||||||||| | |||||||| ||||||| | ||||  ||||||||||||||||||| |||||||||||||  ||||| |||| | ||  |||||||||||    
T  36311321 taatcgcaactatttgagaagataaggggttaaaatgtcatatttcccttatgttatggggtcaaaagagtatattttcctaaatat--ggggtcacttt 36311224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 22 - 122
Target Start/End: Complemental strand, 33105112 - 33105013
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    ||||||| || |||||| ||| | |||||||||||| | |||||||| |||||| ||| |  |||||||||| |||||||||| ||||| ||||||||||    
T  33105112 ataatcgaaactttttgggaagaaaagggatcaaaataacatatttctcttatgatagaga-tcaaaagagcatatttccctaaacatggggggtcactt 33105014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 124
Target Start/End: Original strand, 46387744 - 46387807
Alignment:
Q  60 tcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcacttttg 124  Q
    ||||||||||||||||||||||| |||||||||| | ||||| || ||||| |||||||||||||    
T  46387744 tcatatttcccttatgttaggggatcaaaagagcatgtttccttaaacatg-ggggtcacttttg 46387807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 9496382 - 9496437
Alignment:
Q  55 aaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatg 110  Q
    ||||| ||||||||| ||||||||| ||||||||||||| |||||||||| |||||    
T  9496382 aaaaagcatatttcctttatgttagagggtcaaaagagcatatttccctaaacatg 9496437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 104
Target Start/End: Original strand, 49657943 - 49657994
Alignment:
Q  52 tcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttcccta 104  Q
    |||||| ||||||||| |||||||||| |||||||||||||| ||||||||||    
T  49657943 tcaaaagatcatattttccttatgtta-ggggtcaaaagagcatatttcccta 49657994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 124
Target Start/End: Complemental strand, 22416505 - 22416402
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctataca-tgaggggtcact 120  Q
    ||||| |||| ||||||  || |||| || |||||| | ||||||| |||||||||||  |||||||||||| ||| |||||| ||| || |||||||||    
T  22416505 ataattgcaactttttgtaaagataatgggtcaaaagagcatatttaccttatgttagaaggtcaaaagagcatatatccctaaacattggggggtcact 22416406  T
Q  121 tttg 124  Q
    ||||    
T  22416405 tttg 22416402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 93
Target Start/End: Original strand, 31039109 - 31039180
Alignment:
Q  21 tataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagc 93  Q
    ||||||||||| ||||| |||| |||| || |||  | |||||||||||| ||||||| ||||||||||||||    
T  31039109 tataatcgcaactttttaagaagataaagggtcattagatcatatttcccatatgtta-ggggtcaaaagagc 31039180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 58; Significance: 2e-24; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 192
Target Start/End: Complemental strand, 3208151 - 3207983
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||| |||| ||||||| |||||| |||||||||||||||||||| |||||||||||| | |||||||||| ||||   || ||||||    
T  3208151 ataatcgcaactttttaagaagataaggggtcaaaatatcatatttcccttatgtta-ggggtcaaaagaacatatttccctaaacatagaggttcactt 3208053  T
Q  122 ttgtcannnnnnncataggaggtcaaaatcgcaac-ttttaaaacttaagaggtgaaaattgccctttagcc 192  Q
    ||||||       |||| |||| ||||||| |||| ||||||||||||||||||||||| ||| ||||||||    
T  3208052 ttgtca-ctttttcata-gaggccaaaatcacaactttttaaaacttaagaggtgaaaaatgcactttagcc 3207983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 19391520 - 19391621
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || ||||||| |||||||| |||||||||||||||||||| |||||||||||| |||||||||| ||||  ||||||||||    
T  19391520 ataatcgcaactttttgtaaagataaggggtcaaaaaa-catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcactt 19391618  T
Q  122 ttg 124  Q
    |||    
T  19391619 ttg 19391621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 30784397 - 30784498
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || ||||||| |||||||| |||||||||||||||||||| |||||||||||| |||||||||| ||||  ||||||||||    
T  30784397 ataatcgcaactttttgtaaagataaggggtcaaaaaa-catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatacggggtcactt 30784495  T
Q  122 ttg 124  Q
    |||    
T  30784496 ttg 30784498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 44 - 124
Target Start/End: Original strand, 21666429 - 21666508
Alignment:
Q  44 ataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcacttttg 124  Q
    ||||||| |||||||| ||||||||||||||||||||||||||| ||||| |||||||||| ||||| |||||||||||||    
T  21666429 ataaggggtcaaaaaa-catatttcccttatgttagggggtcaagagagcatatttccctaaacatggggggtcacttttg 21666508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 4519000 - 4519101
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || ||||||| |||||||| |||||||||||||||||||| | |||||||||| |||||||||| ||||  ||||||||||    
T  4519000 ataatcgcaactttttgtaaagataaggggtcaaaaaa-catatttcccttatgttaggagatcaaaagagcatatttccctaaacatagggggtcactt 4519098  T
Q  122 ttg 124  Q
    |||    
T  4519099 ttg 4519101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 22 - 124
Target Start/End: Complemental strand, 17648414 - 17648313
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || ||||||| |||||||  |||||||||||||||||||| |||||||||||| |||||||||| ||||  ||||||||||    
T  17648414 ataatcgcaactttttgtaaagataaggggtcaaaaag-catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcactt 17648316  T
Q  122 ttg 124  Q
    |||    
T  17648315 ttg 17648313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 127
Target Start/End: Original strand, 4423153 - 4423268
Alignment:
Q  13 aaaatggttataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgtta-gggggtcaaaagagcgtatttccctatacatga 111  Q
    |||| ||| |||||||||| ||||||| || ||||||| |||||| |||||||||||||||||||| || ||| |||||| | ||||||| || |||||     
T  4423153 aaaagggtcataatcgcaattttttgaaaagataaggggtcaaaagatcatatttcccttatgttatggaggttaaaagaacatatttccataaacatgg 4423252  T
Q  112 ggggtcacttttgtca 127  Q
    |||||||||| |||||    
T  4423253 ggggtcacttctgtca 4423268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 123
Target Start/End: Original strand, 18253019 - 18253117
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||| ||| |||||||||| ||||||| |||||||||||||||||||||||||||  ||||||||| | | |||||||||| ||||  ||||||||||    
T  18253019 ataatcacaactttttgagaagataaggggtcaaaaaatcatatttcccttatgtta-tgggtcaaaaaaacatatttccctaaacat--ggggtcactt 18253115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 21929968 - 21930036
Alignment:
Q  55 aaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcacttttg 124  Q
    ||||| |||||||||||||||||||| |||||||||||| |||||||||| |||| ||||||||||||||    
T  21929968 aaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacat-aggggtcacttttg 21930036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 123
Target Start/End: Complemental strand, 38630226 - 38630126
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || ||||||| |||||||  |||||||||||||||||||| |||||||||||| |||||||||| ||||  || |||||||    
T  38630226 ataatcgcaactttttgtaaagataaggggtcaaaaag-catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggagtcactt 38630128  T
Q  122 tt 123  Q
    ||    
T  38630127 tt 38630126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 4807733 - 4807835
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacat-gaggggtcact 120  Q
    |||||||||| ||||||  || ||||||| |||||||  |||||||||||||||||||| |||||||||| | ||||||| || |||| |||||||||||    
T  4807733 ataatcgcaactttttgtaaagataaggggtcaaaaag-catatttcccttatgttaggaggtcaaaagaacatatttccttaaacatagaggggtcact 4807831  T
Q  121 tttg 124  Q
    ||||    
T  4807832 tttg 4807835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 5192404 - 5192505
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || ||||| | |||||||| |||||||||||||||||| | |||||||||||| |||||||||| ||||  | ||||||||    
T  5192404 ataatcgcaactttttgtaaagataagaggtcaaaaaa-catatttcccttatgttaagaggtcaaaagagcatatttccctaaacataggaggtcactt 5192502  T
Q  122 ttg 124  Q
    |||    
T  5192503 ttg 5192505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 12723394 - 12723495
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || |||| || |||||||| |||||||||||||||||||| |||||||||||| |||||| ||| ||||  ||||||| ||    
T  12723394 ataatcgcaactttttgtaaagataacgggtcaaaaaa-catatttcccttatgttaggaggtcaaaagagcatatttctctaaacatagggggtcattt 12723492  T
Q  122 ttg 124  Q
    |||    
T  12723493 ttg 12723495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 124
Target Start/End: Complemental strand, 19924436 - 19924335
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || ||||||| |||||||  |||||||||||||||||||| ||||| |||||  |||||||||| ||||  ||||||||||    
T  19924436 ataatcgcaactttttgtaaagataaggggtcaaaaag-catatttcccttatgttaggaggtcagaagagtatatttccctaaacatagggggtcactt 19924338  T
Q  122 ttg 124  Q
    |||    
T  19924337 ttg 19924335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 124
Target Start/End: Complemental strand, 33895545 - 33895444
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    ||||| |||| ||||||  || ||||||| | |||||| |||||||||||||||||||| |||||||||||| |||||||||| ||||  ||| ||||||    
T  33895545 ataattgcaactttttgtaaagataaggggttaaaaaa-catatttcccttatgttaggaggtcaaaagagcatatttccctaaacataggggatcactt 33895447  T
Q  122 ttg 124  Q
    |||    
T  33895446 ttg 33895444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 92
Target Start/End: Original strand, 41385623 - 41385693
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagag 92  Q
    |||||| ||| |||||||||  ||||||| |||||||||||||||||||||||||||| | ||||||||||    
T  41385623 ataatcacaactttttgagatgataaggggtcaaaaaatcatatttcccttatgttagagagtcaaaagag 41385693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 55 - 124
Target Start/End: Complemental strand, 44147110 - 44147042
Alignment:
Q  55 aaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcacttttg 124  Q
    ||||| |||||||||||||||||||| |||||||| ||| |||||||||| |||| ||||||||||||||    
T  44147110 aaaaagcatatttcccttatgttaggaggtcaaaatagcatatttccctaaacat-aggggtcacttttg 44147042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 110
Target Start/End: Original strand, 41688243 - 41688331
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatg 110  Q
    |||||||||| |||||||||| ||||||| |||||| |||| ||||  ||||||||| |||||||||||| | |||||| ||| |||||    
T  41688243 ataatcgcaactttttgagaagataaggggtcaaaatatcagatttttcttatgttaaggggtcaaaagaacatatttctctaaacatg 41688331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 26 - 124
Target Start/End: Complemental strand, 1824772 - 1824677
Alignment:
Q  26 tcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcacttttg 124  Q
    |||||| |||||||||| |||||   | |||| ||||||||| |||||||||| |||||||||||||| |||||||||| ||||  |||||||||||||    
T  1824772 tcgcaactttttgagaagataagaagttaaaagatcatattttccttatgtta-ggggtcaaaagagcatatttccctaaacat--ggggtcacttttg 1824677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 26 - 124
Target Start/End: Complemental strand, 1859217 - 1859122
Alignment:
Q  26 tcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcacttttg 124  Q
    |||||| |||||||||| |||||   | |||| ||||||||| |||||||||| |||||||||||||| |||||||||| ||||  |||||||||||||    
T  1859217 tcgcaactttttgagaagataagaagttaaaagatcatattttccttatgtta-ggggtcaaaagagcatatttccctaaacat--ggggtcacttttg 1859122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 8802533 - 8802633
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || ||||||| |||||||    |||||||||||||||||| |||||||||||| |||||||||| ||||   |||||||||    
T  8802533 ataatcgcaactttttgtaaagataaggggtcaaaaagc--tatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagagggtcactt 8802630  T
Q  122 ttg 124  Q
    |||    
T  8802631 ttg 8802633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 61 - 124
Target Start/End: Original strand, 32400493 - 32400556
Alignment:
Q  61 catatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcacttttg 124  Q
    |||||||||||||||||||||||||||||| || |||||| ||| ||||  |||||||||||||    
T  32400493 catatttcccttatgttagggggtcaaaagcgcatatttcactaaacatagggggtcacttttg 32400556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 22452338 - 22452407
Alignment:
Q  55 aaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcacttttg 124  Q
    ||||| |||||||||||||||||||| |||||||||||| |||||||||| | ||  | |||||||||||    
T  22452338 aaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaatatatgaggtcacttttg 22452407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 120
Target Start/End: Complemental strand, 3380337 - 3380272
Alignment:
Q  55 aaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcact 120  Q
    ||||| ||||||||||||||| ||| ||| ||||||||| ||||| |||| ||||| |||||||||    
T  3380337 aaaaaacatatttcccttatgctagagggacaaaagagcatatttacctaaacatggggggtcact 3380272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 110
Target Start/End: Original strand, 18881636 - 18881724
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatg 110  Q
    ||||| |||| ||||||  || ||||||| |||||| | | |||||||||||||||||  | |||||| ||| |||||||||| |||||    
T  18881636 ataattgcaactttttgtaaagataaggggtcaaaagagcgtatttcccttatgttagaagctcaaaatagcatatttccctaaacatg 18881724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0607 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 22 - 198
Target Start/End: Original strand, 2182 - 2357
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || ||||||| |||||||  |||||| ||||||||||||| |||||||||||| |||||||||| ||||  ||||||||||    
T  2182 ataatcgcaactttttgtaaagataaggggtcaaaaag-catattgcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcactt 2280  T
Q  122 ttgtcannnnnnncataggaggtcaaaatcgcaacttttaaaacttaagaggtgaaaattgccctttagccaataaa 198  Q
    ||| ||        ||||| || ||||||||||||||||||||||||  ||| ||||| ||  |||||||| |||||    
T  2281 ttgccatttttttaatagggggccaaaatcgcaacttttaaaacttagaaggcgaaaagtggactttagcctataaa 2357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 3e-23; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 25 - 179
Target Start/End: Complemental strand, 36464441 - 36464289
Alignment:
Q  25 atcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcacttttg 124  Q
    ||||||| |||||||||| ||||||  |||||| || |||||||||||||||||||||||||||||| | |||||||||| ||||  |||||||||||||    
T  36464441 atcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtcaaaagatcatatttccctaaacat--ggggtcacttttg 36464344  T
Q  125 tcannnnnnncataggaggtcaaaatcgcaac-ttttaaaacttaagaggtgaaaa 179  Q
     ||        ||||| ||||||||||||||| |||||||||||||| || |||||    
T  36464343 ccattttttaaatagg-ggtcaaaatcgcaacattttaaaacttaaggggcgaaaa 36464289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 124
Target Start/End: Complemental strand, 4588032 - 4587931
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || ||||||| | |||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||  ||||||||||    
T  4588032 ataatcgcaactttttgtaaagataaggggttaaaaaa-catatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcactt 4587934  T
Q  122 ttg 124  Q
    |||    
T  4587933 ttg 4587931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 192
Target Start/End: Original strand, 26829222 - 26829389
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||| ||| |||||||||  ||||||| |||||| |||||||||||||||||||| |||||| ||||||| ||||||| || ||||||  ||||||||    
T  26829222 ataatcacaactttttgagatgataaggggtcaaaagatcatatttcccttatgtta-ggggtccaaagagcatatttccttaaacatga--ggtcactt 26829318  T
Q  122 ttgtcannnnnnncataggaggtcaaaatcgcaac-ttttaaaacttaagaggtgaaaattgccctttagcc 192  Q
    ||||||       |||||| || |||||||||||| |||||||||||||| | |||||| ||| ||||||||    
T  26829319 ttgtca-ttttttcatagggggccaaaatcgcaacattttaaaacttaagggatgaaaagtgcactttagcc 26829389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 22 - 127
Target Start/End: Complemental strand, 2986857 - 2986753
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || ||||||| |||||||  |||||||||||||||||||| |||||||||||| |||||||||| ||||  ||||||||||    
T  2986857 ataatcgcaactttttgtaaagataaggggtcaaaaag-catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcactt 2986759  T
Q  122 ttgtca 127  Q
    ||||||    
T  2986758 ttgtca 2986753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 192
Target Start/End: Complemental strand, 28365690 - 28365512
Alignment:
Q  13 aaaatggttataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgag 112  Q
    |||| ||| |||||||||| |||||||||| ||||||| | |||| ||||||||||||| |||||| ||||||||| |||| |||||||||| | || ||    
T  28365690 aaaagggtcataatcgcaactttttgagaagataaggggttaaaagatcatatttccctcatgtta-ggggtcaaacgagcatatttccctaaatat-ag 28365593  T
Q  113 gggtcacttttgtca-nnnnnnncataggaggtcaaaatcgcaac-ttttaaaacttaagaggtgaaaattgccctttagcc 192  Q
    |||||||||||||||        |||||| ||||||||||||||| |||||||| ||||| |||||||| |||  |||||||    
T  28365592 gggtcacttttgtcattttttttcatagg-ggtcaaaatcgcaactttttaaaatttaaggggtgaaaagtgcattttagcc 28365512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 22 - 121
Target Start/End: Complemental strand, 15700918 - 15700820
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || ||||||| |||||||| ||||||||||||||||||||||||||||||||| |||||||| | ||||  ||||||||||    
T  15700918 ataatcgcaactttttgtaaagataaggggtcaaaaaa-catatttcccttatgttagggggtcaaaagagcatatttcccgaaacatagggggtcactt 15700820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 22 - 124
Target Start/End: Complemental strand, 331884 - 331782
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || |||| ||||||||||| ||||||||||||| ||||| ||||||||||||| |||||||||| |||||   ||||||||    
T  331884 ataatcgcaactttttgcaaagataatggatcaaaaaagcatatttcccttaagttagagggtcaaaagagcatatttccctaaacatggaaggtcactt 331785  T
Q  122 ttg 124  Q
    |||    
T  331784 ttg 331782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 25298934 - 25299035
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || |||||||||||||||| ||||||||| |||||||| | |||||||||||| |||||||||| ||||  ||||||||||    
T  25298934 ataatcgcaactttttgtaaagataagggatcaaaaaa-catatttcctttatgttaagaggtcaaaagagcatatttccctaaacatagggggtcactt 25299032  T
Q  122 ttg 124  Q
    |||    
T  25299033 ttg 25299035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 22 - 168
Target Start/End: Complemental strand, 38716364 - 38716218
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || ||||||| |||||||  |||||||| ||||||||||| |||||||||||| |||||||||| ||||  ||||||||||    
T  38716364 ataatcgcaactttttgtaaagataaggggtcaaaaag-catatttctcttatgttaggaggtcaaaagagcatatttccctaaacatatggggtcactt 38716266  T
Q  122 ttgtcannnnnnncataggaggtcaaaatcgcaac-ttttaaaactta 168  Q
    ||| ||        ||||| ||||||||||||||| ||||||||||||    
T  38716265 ttgccatttttttaatagggggtcaaaatcgcaacattttaaaactta 38716218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 124
Target Start/End: Complemental strand, 11176078 - 11175977
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||| ||| ||||||  || ||||||| |||||||  |||||||||||||||||||| |||||||||||| |||||||||| ||||  ||||||||||    
T  11176078 ataatcacaactttttgtaaagataaggggtcaaaaag-catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcactt 11175980  T
Q  122 ttg 124  Q
    |||    
T  11175979 ttg 11175977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 25884310 - 25884411
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| |||||||||| ||||||| | |||| |||||||||||||||||||||||| | |||| | | |||||| ||| ||||| ||||||||||    
T  25884310 ataatcgcaactttttgagaagataaggggttaaaatatcatatttcccttatgttaggggattaaaataacatatttctctaaacatg-ggggtcactt 25884408  T
Q  122 ttg 124  Q
    |||    
T  25884409 ttg 25884411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 9051160 - 9051261
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || ||||| | |||||||  |||||||||||||||||||| |||||||||||| |||||||||| ||||  || |||||||    
T  9051160 ataatcgcaactttttgtaaagataagaggtcaaaaag-catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggagtcactt 9051258  T
Q  122 ttg 124  Q
    |||    
T  9051259 ttg 9051261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 124
Target Start/End: Complemental strand, 15735235 - 15735134
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || ||||||| |||||| | |||||||||||||||||| | |||||||||||| |||||||| | ||||  ||||||||||    
T  15735235 ataatcgcaactttttgtaaagataaggggtcaaaata-catatttcccttatgttacgaggtcaaaagagcatatttcccaaaacatagggggtcactt 15735137  T
Q  122 ttg 124  Q
    |||    
T  15735136 ttg 15735134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 6763882 - 6763951
Alignment:
Q  55 aaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcacttttg 124  Q
    ||||| ||||||| |||||||||||| |||||||||||| |||||||||| ||||  |||||||||||||    
T  6763882 aaaaagcatattttccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttg 6763951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 30714439 - 30714508
Alignment:
Q  55 aaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcacttttg 124  Q
    ||||| |||||||||||||||||||| |||||||||||| |||||||| | ||||  |||||||||||||    
T  30714439 aaaaagcatatttcccttatgttaggaggtcaaaagagcatatttcccgaaacatagggggtcacttttg 30714508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 61 - 124
Target Start/End: Complemental strand, 22191179 - 22191116
Alignment:
Q  61 catatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcacttttg 124  Q
    ||||||||||||||||||||  ||||||||||| |||||||||| ||||  |||||||||||||    
T  22191179 catatttcccttatgttaggaagtcaaaagagcatatttccctaaacatagggggtcacttttg 22191116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 124
Target Start/End: Complemental strand, 9787730 - 9787629
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    ||||||| || ||||||  || ||||||| |||||||  |||||||||||||||||||  |||||||||||| |||||||||| ||||   |||||||||    
T  9787730 ataatcgtaactttttgtaaagataaggggtcaaaaag-catatttcccttatgttagcaggtcaaaagagcatatttccctaaacatagtgggtcactt 9787632  T
Q  122 ttg 124  Q
    |||    
T  9787631 ttg 9787629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 127
Target Start/End: Complemental strand, 43301802 - 43301722
Alignment:
Q  46 aagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcacttttgtca 127  Q
    ||||| |||||| ||||||||||||||| |||| |||||||||||| | || ||||||| ||||  ||||||||||||||||    
T  43301802 aagggttcaaaagatcatatttcccttaagtta-ggggtcaaaagaacatacttccctaaacatatggggtcacttttgtca 43301722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 111
Target Start/End: Original strand, 22387223 - 22387289
Alignment:
Q  44 ataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatga 111  Q
    ||||||| |||||||| |||||||| | |||||||||||||||||||||| |||||| ||| ||||||    
T  22387223 ataaggggtcaaaaaa-catatttctcatatgttagggggtcaaaagagcatatttcactaaacatga 22387289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 18537961 - 18538062
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    ||||| |||| ||||||  || ||||||| |||||||  ||||||||||| |||||| | |||||||| ||| |||||||||| ||||  ||||||||||    
T  18537961 ataattgcaactttttgtaaagataaggggtcaaaaag-catatttccctaatgttatgaggtcaaaaaagcatatttccctaaacatagggggtcactt 18538059  T
Q  122 ttg 124  Q
    |||    
T  18538060 ttg 18538062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 12350179 - 12350103
Alignment:
Q  23 taatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttcccta 104  Q
    ||||||||| |||||||||| ||||    |||||| |||||||||||||||  ||||||| |||||||||| ||||||||||    
T  12350179 taatcgcaactttttgagaagataa----tcaaaatatcatatttcccttaccttagggg-tcaaaagagcatatttcccta 12350103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 93
Target Start/End: Complemental strand, 17368387 - 17368317
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagc 93  Q
    ||||| |||| ||||||  || ||||||| |||||||  |||||||||||||||||||| ||||||||||||    
T  17368387 ataattgcaactttttgtaaagataaggggtcaaaaag-catatttcccttatgttaggaggtcaaaagagc 17368317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 101
Target Start/End: Complemental strand, 1020529 - 1020483
Alignment:
Q  55 aaaaatcatatttcccttatgttagggggtcaaaagagcgtatttcc 101  Q
    |||||||||||||| |||||||||| ||||||||| ||| |||||||    
T  1020529 aaaaatcatatttctcttatgttagagggtcaaaatagcatatttcc 1020483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 110
Target Start/End: Complemental strand, 2190665 - 2190616
Alignment:
Q  61 catatttcccttatgttagggggtcaaaagagcgtatttccctatacatg 110  Q
    ||||||| ||||| ||||| ||||||||||||| |||||||||| |||||    
T  2190665 catattttccttaagttagagggtcaaaagagcatatttccctaaacatg 2190616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 5782 - 5883
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || ||||||| |||||||| |||||||||||||||||||| |||||||||||| |||||||||| ||||  ||||||||||    
T  5782 ataatcgcaactttttgtaaagataaggggtcaaaaaa-catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcactt 5880  T
Q  122 ttg 124  Q
    |||    
T  5881 ttg 5883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 33 - 127
Target Start/End: Complemental strand, 455091 - 454997
Alignment:
Q  33 tttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcacttttgtca 127  Q
    |||| ||||| ||||||| |||||| ||| ||||||| |||||||||||||| |||||||| |||||||||| ||||| ||||||||||||||||    
T  455091 ttttagagaagataaggggtcaaaagatcgtatttcctttatgttagggggttaaaagagcatatttccctaaacatggggggtcacttttgtca 454997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 118
Target Start/End: Complemental strand, 455198 - 455102
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtca 118  Q
    |||||||||| |||| ||||| ||||||| |||||| |||||||||||||||||||||||||| |||||| | ||||| |||| ||||| |||||||    
T  455198 ataatcgcaacttttagagaagataaggggtcaaaagatcatatttcccttatgttagggggttaaaagaacatattttcctaaacatggggggtca 455102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 22 - 127
Target Start/End: Complemental strand, 10092 - 9989
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| |||||||||| ||||||| || ||| ||||||||| |||||||||| ||| |||||||||| |||||||||| |||||| |||||||||    
T  10092 ataatcgcaactttttgagaagataaggggtctaaagatcatattttccttatgttatggg-tcaaaagagcatatttccctaaacatga-gggtcactt 9995  T
Q  122 ttgtca 127  Q
    ||||||    
T  9994 ttgtca 9989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 22 - 121
Target Start/End: Complemental strand, 49830 - 49732
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || ||||||| |||||||| ||||||||||||||||||||||||||||||||| |||||||| | ||||  ||||||||||    
T  49830 ataatcgcaactttttgtaaagataaggggtcaaaaaa-catatttcccttatgttagggggtcaaaagagcatatttcccgaaacatagggggtcactt 49732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 22 - 121
Target Start/End: Complemental strand, 62369 - 62271
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || ||||||| |||||||| ||||||||||||||||||||||||||||||||| |||||||| | ||||  ||||||||||    
T  62369 ataatcgcaactttttgtaaagataaggggtcaaaaaa-catatttcccttatgttagggggtcaaaagagcatatttcccgaaacatagggggtcactt 62271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1202 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold1202
Description:

Target: scaffold1202; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 1907 - 2008
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || ||||||| |||||||  ||||||||||||||||||||||||||||| ||| |||||||||| ||||  ||||||||||    
T  1907 ataatcgcaactttttgtaaagataaggggtcaaaaag-catatttcccttatgttagggggtcaaaatagcatatttccctaaacatagggggtcactt 2005  T
Q  122 ttg 124  Q
    |||    
T  2006 ttg 2008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 22 - 179
Target Start/End: Complemental strand, 19453 - 19298
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || ||||||| |||||||  |||||||||||||||||| |||||||||||||| |||||||||| |||| |||||||||||    
T  19453 ataatcgcaactttttgtaaagataaggggtcaaaaag-catatttcccttatgtta-ggggtcaaaagagcatatttccctaaacat-aggggtcactt 19357  T
Q  122 ttgtcannnnnnncataggaggtcaaaatcgcaac-ttttaaaacttaagaggtgaaaa 179  Q
    ||| ||        ||||| ||||||||||||||| |||| ||||||| |||| |||||    
T  19356 ttgccatttttttaatagggggtcaaaatcgcaacattttgaaacttaggaggcgaaaa 19298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 124
Target Start/End: Complemental strand, 61985 - 61884
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    ||||| |||| ||||||  || ||||||| |||||||  ||||||||||||||||||||  ||||||||||| |||||||||| ||||  ||||||||||    
T  61985 ataattgcaactttttgtaaagataaggggtcaaaaag-catatttcccttatgttaggatgtcaaaagagcatatttccctaaacatagggggtcactt 61887  T
Q  122 ttg 124  Q
    |||    
T  61886 ttg 61884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0267 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 21 - 124
Target Start/End: Original strand, 3700 - 3800
Alignment:
Q  21 tataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcact 120  Q
    |||||||| || ||||||  || ||||||| |||||||  ||||||||||||||||||||||||||||||||| |||||||||| ||||  |||||||||    
T  3700 tataatcgaaactttttgtaaagataaggggtcaaaaag-catatttcccttatgttagggggtcaaaagagcatatttccctaaacat--ggggtcact 3796  T
Q  121 tttg 124  Q
    ||||    
T  3797 tttg 3800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 55 - 123
Target Start/End: Original strand, 25129 - 25197
Alignment:
Q  55 aaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactttt 123  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||  ||||||||||||    
T  25129 aaaaagcatatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcactttt 25197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 123
Target Start/End: Complemental strand, 29887 - 29789
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    ||||| |||| |||||||||| ||||||| |||||| |||||||||||||||||||| |||||| ||||||| |||||||| | ||||  ||||||||||    
T  29887 ataattgcaactttttgagaagataaggggtcaaaagatcatatttcccttatgtta-ggggtccaaagagcatatttccccaaacat--ggggtcactt 29791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 142080 - 142180
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    |||||||||| ||||||  || ||||| | |||||||  |||||||||||||||||||| |||||||||||| |||||||||| |||| |||||||||||    
T  142080 ataatcgcaactttttgtaaagataagaggtcaaaaag-catatttcccttatgttaggaggtcaaaagagcatatttccctaaacat-aggggtcactt 142177  T
Q  122 ttg 124  Q
    |||    
T  142178 ttg 142180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 3093 - 3194
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    ||||| |||| ||||||  || ||||| | |||||||| |||||||||||||||||||| |||||||||||| |||||||||| ||||  | ||||||||    
T  3093 ataattgcaactttttgtaaagataagaggtcaaaaaa-catatttcccttatgttaggaggtcaaaagagcatatttccctaaacataggaggtcactt 3191  T
Q  122 ttg 124  Q
    |||    
T  3192 ttg 3194  T

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Target: scaffold0014 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 112298 - 112216
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttcccta 104  Q
    |||| ||||| |||||||||| ||||||  |||||| |||||||||||||||||||||| ||||||||  || ||||||||||    
T  112298 ataaccgcaactttttgagaagataaggagtcaaaagatcatatttcccttatgttaggaggtcaaaaaggcatatttcccta 112216  T

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Target: scaffold0406 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0406
Description:

Target: scaffold0406; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 104
Target Start/End: Complemental strand, 2163 - 2081
Alignment:
Q  21 tataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttcccta 104  Q
    ||||||||||| ||||||  || ||| ||| |||||||  ||| |||||||||||||||| |||||||||||| ||||||||||    
T  2163 tataatcgcaactttttgtaaagatatggggtcaaaaag-catgtttcccttatgttaggaggtcaaaagagcatatttcccta 2081  T

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Target: scaffold0060 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 109
Target Start/End: Complemental strand, 66345 - 66259
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacat 109  Q
    |||||||||| ||||||  || ||||||| |||||||  |||| ||||||||||||||| |||||||| ||| |||||||||| ||||    
T  66345 ataatcgcaactttttgtaaagataaggggtcaaaaag-catagttcccttatgttaggaggtcaaaatagcatatttccctaaacat 66259  T

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Target: scaffold0150 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 109
Target Start/End: Complemental strand, 6012 - 5916
Alignment:
Q  13 aaaatggttataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttag-ggggtcaaaagagcgtatttccctatacat 109  Q
    |||| ||| |||||||||| |||||   || ||||||| |||||||  ||||||||||||||||||| |||||||||| ||| |||||||||| ||||    
T  6012 aaaaaggtcataatcgcaactttttataaagataaggggtcaaaaag-catatttcccttatgttaggggggtcaaaatagcatatttccctaaacat 5916  T

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Target: scaffold1875 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1875
Description:

Target: scaffold1875; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 889 - 990
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatgaggggtcactt 121  Q
    ||||| |||| ||||||  || ||||||| |||||| | ||||||| |||||||||||  |||||||| ||| ||| |||||| ||||  ||||||||||    
T  889 ataattgcaactttttgtaaagataaggggtcaaaagagcatatttaccttatgttagaaggtcaaaatagcatatatccctaaacat-tggggtcactt 987  T
Q  122 ttg 124  Q
    |||    
T  988 ttg 990  T

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Target: scaffold0171 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 179
Target Start/End: Complemental strand, 9139 - 9101
Alignment:
Q  142 ggtcaaaatcgcaactttt-aaaacttaagaggtgaaaa 179  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  9139 ggtcaaaatcgcaactttttaaaacttaagaggtgaaaa 9101  T

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Target: scaffold0321 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 190
Target Start/End: Complemental strand, 18786 - 18730
Alignment:
Q  135 cataggaggtcaaaatcgcaac-ttttaaaacttaagaggtgaaaattgccctttag 190  Q
    |||||||||||||||||||||| |||||||| ||||||||  |||| ||| ||||||    
T  18786 cataggaggtcaaaatcgcaactttttaaaagttaagagggaaaaagtgcactttag 18730  T

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Target: scaffold0103 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 3061 - 3121
Alignment:
Q  22 ataatcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggg 82  Q
    |||||||||| ||||||  || ||||||| |||||| | ||||||| ||||||||||||||    
T  3061 ataatcgcaactttttgtaaaaataaggggtcaaaatagcatatttaccttatgttagggg 3121  T

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Target: scaffold0024 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 110
Target Start/End: Original strand, 43961 - 44044
Alignment:
Q  26 tcgcaagtttttgagaacataagggatcaaaaaatcatatttcccttatgttagggggtcaaaagagcgtatttccctatacatg 110  Q
    |||||| |||||||||| ||||  | |||||| ||||||||||||||  |||| |||||||||| ||| ||||| |||| |||||    
T  43961 tcgcaactttttgagaagataaaaggtcaaaagatcatatttccctttcgtta-ggggtcaaaaaagcatattttcctaaacatg 44044  T

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