View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2584_low_11 (Length: 324)
Name: NF2584_low_11
Description: NF2584
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2584_low_11 |
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Alignment Details
Target: chr5 (Bit Score: 248; Significance: 1e-138; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 11 - 303
Target Start/End: Original strand, 6855529 - 6855827
Alignment:
| Q |
11 |
caaaggatggtatagtaatatgtatggtgtttt------cagacaaataatagaaatggacagcattaggctcttgtttagctgcacgcaaaactctagt |
104 |
Q |
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| T |
6855529 |
caaaggatggtatagtaatatgtatgttgtttctgttaacagacaaataatagaaatggacagcattaggctcttgtttagctgcacgcaaaactctagt |
6855628 |
T |
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| Q |
105 |
aacaatagcgatactgttaattgtcagcagaacatgtttaacatataaattcaaaccaaatcatacacattaaatttatttccccgtaactagaaaacat |
204 |
Q |
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| T |
6855629 |
aacaatagctatactgttaattgtcagcagaacatgtttaacatataaattcaaaccaaatcatacacattaaatttatttccccgtaactagaaaacat |
6855728 |
T |
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| Q |
205 |
taatcattatacttatatcgtgtctatttagcatataaatttgaggaaaaaagtcataaaactgaacacttttgtgcatatatggtctaagagataacc |
303 |
Q |
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||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||||||||||| |
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| T |
6855729 |
taatccttatacttatatcgtgtctatttagcatataaatttgaggaaaaaagtcataaaactgcacacttttttgcctatatggtctaagagataacc |
6855827 |
T |
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