View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2585_high_26 (Length: 396)
Name: NF2585_high_26
Description: NF2585
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2585_high_26 |
 | |
|
| [»] scaffold1207 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 349; Significance: 0; HSPs: 9)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 349; E-Value: 0
Query Start/End: Original strand, 22 - 390
Target Start/End: Original strand, 11133171 - 11133539
Alignment:
| Q |
22 |
gtaccacctcctaaatcaaaaacaaaaacatgtttatggtcatgattaaacggtttcttgtcaagaccatatgcaattgcagctgctgtaggctcgttga |
121 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11133171 |
gtaccacctcctaaatcaaaaacaaaaacatgtttatggtcatgattaaacggtttcttgtcaagaccatatgcaattgcagctgctgtaggctcgttga |
11133270 |
T |
|
| Q |
122 |
ttattcgcataacgttgagacgtgcaataacacctgcatctctagtagcttggcgttgcgagtcattaaagtaagcaggaacagttataacgacatcctt |
221 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11133271 |
ttattcgcataacgttgagacctgcaataacacctgcatctctagtagcttggcgttgcgagtcattaaagtaagcaggaacagttataacgacatcctt |
11133370 |
T |
|
| Q |
222 |
cactgttgatccaaggtaaacttctgcaatttcacgaatttttgtcaataccattgatgatatttgctcagcagaaaaatgtttttcctctccattgtaa |
321 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| |
|
|
| T |
11133371 |
cactgttgatccaaggtaaacttctgcaatctcacgaatttttgtcaataccattgatgatatttcctcagcagcaaaatgtttttcctctccattgtaa |
11133470 |
T |
|
| Q |
322 |
ttgacaacaatattgggtttgtcatttatgccaccaattactttaaatggccacaatttcatctcactc |
390 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
11133471 |
ttgacaacaatattgggtttgtcatttatgccaccaattactttaaatggccacaatttcatatcactc |
11133539 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 21 - 389
Target Start/End: Original strand, 11196899 - 11197267
Alignment:
| Q |
21 |
agtaccacctcctaaatcaaaaacaaaaacatgtttatggtcatgattaaacggtttcttgtcaagaccatatgcaattgcagctgctgtaggctcgttg |
120 |
Q |
| |
|
||||||||| ||||||||||||| ||||||||| || |||||||||| |||||| |||||||||||||||||||||||||||| | |||||| ||| |
|
|
| T |
11196899 |
agtaccaccacctaaatcaaaaatgaaaacatgtctacatccatgattaaaaggtttcatgtcaagaccatatgcaattgcagctgcagaaggctcattg |
11196998 |
T |
|
| Q |
121 |
attattcgcataacgttgagacgtgcaataacacctgcatctctagtagcttggcgttgcgagtcattaaagtaagcaggaacagttataacgacatcct |
220 |
Q |
| |
|
|||||||||||||| ||||| | ||||||||||| ||||||| ||| | |||||||| |||||||||||||||||||| ||||||||||| ||||||| |
|
|
| T |
11196999 |
attattcgcataacattgaggccagcaataacacccgcatctcgagtggactggcgttgtgagtcattaaagtaagcaggcacagttataacaacatcct |
11197098 |
T |
|
| Q |
221 |
tcactgttgatccaaggtaaacttctgcaatttcacgaatttttgtcaataccattgatgatatttgctcagcagaaaaatgtttttcctctccattgta |
320 |
Q |
| |
|
|||||||||||||||||||| |||| || || || ||||||| ||||||||| ||||| |||| ||||||| |||||| |||||||| |||| || |
|
|
| T |
11197099 |
tcactgttgatccaaggtaagcttcagctatctcggccatttttgccaataccatcgatgagatttcttcagcagcaaaatgcttttcctcgtcattata |
11197198 |
T |
|
| Q |
321 |
attgacaacaatattgggtttgtcatttatgccaccaattactttaaatggccacaatttcatctcact |
389 |
Q |
| |
|
|| |||||||| ||||||||||||| | | | ||||||||||| || |||||| | ||||| ||||| |
|
|
| T |
11197199 |
gttaacaacaatcatgggtttgtcattgaggtcgccaattactttgaagggccacgacttcatatcact |
11197267 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 18 - 389
Target Start/End: Original strand, 11156443 - 11156814
Alignment:
| Q |
18 |
caaagtaccacctcctaaatcaaaaacaaaaacatgtttatggtcatgattaaacggtttcttgtcaagaccatatgcaattgcagctgctgtaggctcg |
117 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||| |||||||||| |||||| |||||||||||||||||||||||||||| | |||||| |
|
|
| T |
11156443 |
caaagtaccacctcctaaatcaaaaatgaaaacatgtttacatccatgattaaaaggtttcatgtcaagaccatatgcaattgcagctgcagaaggctca |
11156542 |
T |
|
| Q |
118 |
ttgattattcgcataacgttgagacgtgcaataacacctgcatctctagtagcttggcgttgcgagtcattaaagtaagcaggaacagttataacgacat |
217 |
Q |
| |
|
||||||||||||||||| ||||| | ||||||||||| |||||| || | |||||||| |||||||||||||||||||| ||||||||||| |||| |
|
|
| T |
11156543 |
ttgattattcgcataacattgaggccagcaataacacccgcatcttgggtggactggcgttgtgagtcattaaagtaagcaggcacagttataacaacat |
11156642 |
T |
|
| Q |
218 |
ccttcactgttgatccaaggtaaacttctgcaatttcacgaatttttgtcaataccattgatgatatttgctcagcagaaaaatgtttttcctctccatt |
317 |
Q |
| |
|
|||||||||||||||||||||||||||| || || || ||||||| ||||||||| ||||| |||| ||||||| |||||| |||||||| | || |
|
|
| T |
11156643 |
ccttcactgttgatccaaggtaaacttcagctatctcggccatttttgccaataccatcgatgagatttcttcagcagcaaaatgcttttcctcgtcttt |
11156742 |
T |
|
| Q |
318 |
gtaattgacaacaatattgggtttgtcatttatgccaccaattactttaaatggccacaatttcatctcact |
389 |
Q |
| |
|
|| || |||||||| ||||||||||||| | | ||||||||||| || |||||| | ||||| ||||| |
|
|
| T |
11156743 |
atagttaacaacaatcatgggtttgtcattgaggttgccaattactttgaagggccacgacttcatatcact |
11156814 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 18 - 382
Target Start/End: Original strand, 11170743 - 11171107
Alignment:
| Q |
18 |
caaagtaccacctcctaaatcaaaaacaaaaacatgtttatggtcatgattaaacggtttcttgtcaagaccatatgcaattgcagctgctgtaggctcg |
117 |
Q |
| |
|
|||||||||||| ||||| ||||||| ||||||| | || |||||||||| |||||| |||||| |||||||||||||||||||| |||||||| |
|
|
| T |
11170743 |
caaagtaccaccacctaagtcaaaaatgaaaacatttctacatccatgattaaatggtttcaagtcaaggccatatgcaattgcagctgcagtaggctca |
11170842 |
T |
|
| Q |
118 |
ttgattattcgcataacgttgagacgtgcaataacacctgcatctctagtagcttggcgttgcgagtcattaaagtaagcaggaacagttataacgacat |
217 |
Q |
| |
|
|||| |||||||| ||| ||||| | |||||| |||| ||||||| ||||| |||||||| |||||||||||||| ||||| ||||||||||| |||| |
|
|
| T |
11170843 |
ttgagtattcgcaaaacattgaggccagcaatagcacccgcatctcgagtagactggcgttgtgagtcattaaagtatgcaggcacagttataacaacat |
11170942 |
T |
|
| Q |
218 |
ccttcactgttgatccaaggtaaacttctgcaatttcacgaatttttgtcaataccattgatgatatttgctcagcagaaaaatgtttttcctctccatt |
317 |
Q |
| |
|
||| |||| ||||||||||| | |||||| || || || ||||| ||||||||| ||||| |||| ||||||| ||||||||||||||| |||| |
|
|
| T |
11170943 |
cctccactattgatccaaggaaggtttctgctatctcgcgcattttcaccaataccatggatgagatttcttcagcagcaaaatgtttttcctcgtcatt |
11171042 |
T |
|
| Q |
318 |
gtaattgacaacaatattgggtttgtcatttatgccaccaattactttaaatggccacaatttca |
382 |
Q |
| |
|
|| || |||||||| ||||||||||||| | | ||||||||||||| ||||||||||| |||| |
|
|
| T |
11171043 |
atagttaacaacaatcatgggtttgtcattcaggtcaccaattactttgaatggccacaacttca |
11171107 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 62 - 382
Target Start/End: Original strand, 11276171 - 11276491
Alignment:
| Q |
62 |
catgattaaacggtttcttgtcaagaccatatgcaattgcagctgctgtaggctcgttgattattcgcataacgttgagacgtgcaataacacctgcatc |
161 |
Q |
| |
|
|||||||||| |||||| ||| || |||||||||||||||||||| |||||||| || ||||||||||||||||| || | |||||| |||| ||||| |
|
|
| T |
11276171 |
catgattaaatggtttcgtgttaaagccatatgcaattgcagctgcagtaggctcatttattattcgcataacgtttaggccagcaatagcacccgcatc |
11276270 |
T |
|
| Q |
162 |
tctagtagcttggcgttgcgagtcattaaagtaagcaggaacagttataacgacatccttcactgttgatccaaggtaaacttctgcaatttcacgaatt |
261 |
Q |
| |
|
|| ||||| ||||| || |||||||||||||| ||||| ||||||||||| ||||||| ||||||| |||||||| | ||||||| || || || ||| |
|
|
| T |
11276271 |
tcgagtagactggcgctgtgagtcattaaagtatgcaggcacagttataacaacatcctccactgttaatccaaggaaggcttctgctatctcgcgcatt |
11276370 |
T |
|
| Q |
262 |
tttgtcaataccattgatgatatttgctcagcagaaaaatgtttttcctctccattgtaattgacaacaatattgggtttgtcatttatgccaccaatta |
361 |
Q |
| |
|
|| | ||||||||| ||||| |||| ||||||| |||||| |||||||| |||| || || |||||||| ||||||||||||| | | ||||||||| |
|
|
| T |
11276371 |
ttcgccaataccatggatgagatttcttcagcagtaaaatgcttttcctcgtcattatagttaacaacaatcatgggtttgtcattcaggtcaccaatta |
11276470 |
T |
|
| Q |
362 |
ctttaaatggccacaatttca |
382 |
Q |
| |
|
|||| ||||||||||| |||| |
|
|
| T |
11276471 |
ctttgaatggccacaacttca |
11276491 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 18 - 382
Target Start/End: Original strand, 11209565 - 11209929
Alignment:
| Q |
18 |
caaagtaccacctcctaaatcaaaaacaaaaacatgtttatggtcatgattaaacggtttcttgtcaagaccatatgcaattgcagctgctgtaggctcg |
117 |
Q |
| |
|
|||||||||||| ||||| ||||| | ||||||| | || | |||||||||| |||||| || ||| |||||||||||||||||||| |||||||| |
|
|
| T |
11209565 |
caaagtaccaccacctaagtcaaatatgaaaacatttctacgtccatgattaaatggtttcatgccaaagccatatgcaattgcagctgcagtaggctca |
11209664 |
T |
|
| Q |
118 |
ttgattattcgcataacgttgagacgtgcaataacacctgcatctctagtagcttggcgttgcgagtcattaaagtaagcaggaacagttataacgacat |
217 |
Q |
| |
|
|||| |||||||| ||| ||||| | |||||| |||| ||||||| ||||| |||||||| |||||||||||||| ||||| ||||||||||| |||| |
|
|
| T |
11209665 |
ttgagtattcgcaaaacattgaggccagcaatagcacccgcatctcgagtagactggcgttgtgagtcattaaagtatgcaggcacagttataacaacat |
11209764 |
T |
|
| Q |
218 |
ccttcactgttgatccaaggtaaacttctgcaatttcacgaatttttgtcaataccattgatgatatttgctcagcagaaaaatgtttttcctctccatt |
317 |
Q |
| |
|
| | |||||||||||||||| | ||||||| | || || ||||| | ||||||||| ||||| |||| ||||||| |||||| |||||||| | || |
|
|
| T |
11209765 |
catccactgttgatccaaggaaggcttctgctgtctctcgcattttcgccaataccatggatgagatttcttcagcagcaaaatgcttttcctcgtcttt |
11209864 |
T |
|
| Q |
318 |
gtaattgacaacaatattgggtttgtcatttatgccaccaattactttaaatggccacaatttca |
382 |
Q |
| |
|
|| || |||||||| ||||||||||||||| | | ||||||||||| ||||||||||| |||| |
|
|
| T |
11209865 |
atagttaacaacaatcatgggtttgtcatttaggtcgccaattactttgaatggccacaacttca |
11209929 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 21 - 347
Target Start/End: Original strand, 11200064 - 11200394
Alignment:
| Q |
21 |
agtaccacctcctaaatcaaaaacaaaaacatgtttatggtcatgattaaacggtttcttgtcaagaccatatgcaattgcagctgctgtaggctcgttg |
120 |
Q |
| |
|
||||||||| ||||||| ||||| ||||||| | || |||||||||| |||||| |||||||||||||||||||||||||||| | |||||| ||| |
|
|
| T |
11200064 |
agtaccaccacctaaataaaaaatgaaaacatttctacatccatgattaaaaggtttcatgtcaagaccatatgcaattgcagctgcagaaggctcattg |
11200163 |
T |
|
| Q |
121 |
attattcgcataacgttgagacgtgcaataacacctgcatctctagtagcttgg----cgttgcgagtcattaaagtaagcaggaacagttataacgaca |
216 |
Q |
| |
|
|||||||||| ||| ||||| | |||||| |||| ||||||| ||||| ||| ||||| || ||||||||||| | ||| ||| ||||||| ||| |
|
|
| T |
11200164 |
attattcgcaaaacattgaggccagcaatagcacccgcatctcaagtagactggcgtacgttgtgaatcattaaagtatgtaggcacaattataacaaca |
11200263 |
T |
|
| Q |
217 |
tccttcactgttgatccaaggtaaacttctgcaatttcacgaatttttgtcaataccattgatgatatttgctcagcagaaaaatgtttttcctctccat |
316 |
Q |
| |
|
|||||||||||||||||||||||| |||| ||||| || | ||||||||||||||||| ||||| |||| || |||| |||||| |||||||| ||| |
|
|
| T |
11200264 |
tccttcactgttgatccaaggtaagcttcagcaatctcgcccatttttgtcaataccatggatgagatttcttctgcagcaaaatgcttttcctcgtcat |
11200363 |
T |
|
| Q |
317 |
tgtaattgacaacaatattgggtttgtcatt |
347 |
Q |
| |
|
| || || |||||||| ||||||||||||| |
|
|
| T |
11200364 |
tatagttaacaacaatcatgggtttgtcatt |
11200394 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 21 - 389
Target Start/End: Complemental strand, 11241438 - 11241070
Alignment:
| Q |
21 |
agtaccacctcctaaatcaaaaacaaaaacatgtttatggtcatgattaaacggtttcttgtcaagaccatatgcaattgcagctgctgtaggctcgttg |
120 |
Q |
| |
|
||||||||| |||||||| |||| | ||||||| || ||||||||| | |||| ||| ||| ||||||||||||||| |||| |||||||| || |
|
|
| T |
11241438 |
agtaccaccacctaaatcgaaaattagaacatgtctacatccatgattaagagttttcatgttaaggccatatgcaattgcaactgcagtaggctcagtg |
11241339 |
T |
|
| Q |
121 |
attattcgcataacgttgagacgtgcaataacacctgcatctctagtagcttggcgttgcgagtcattaaagtaagcaggaacagttataacgacatcct |
220 |
Q |
| |
|
||||||| || ||| ||||| | |||||| |||| ||||||| | ||| |||||||| |||||||||||||||||||| ||||||||||| ||||||| |
|
|
| T |
11241338 |
attattcacaaaactttgaggccagcaatagcacccgcatctcgaatagactggcgttgtgagtcattaaagtaagcaggcacagttataacaacatcct |
11241239 |
T |
|
| Q |
221 |
tcactgttgatccaaggtaaacttctgcaatttcacgaatttttgtcaataccattgatgatatttgctcagcagaaaaatgtttttcctctccattgta |
320 |
Q |
| |
|
|||||||||||||||||||| |||| || || | ||||||| ||||||||| ||||| |||| ||||||| ||||| |||||||| |||| || |
|
|
| T |
11241238 |
tcactgttgatccaaggtaagcttcagctatcttggccatttttgccaataccatcgatgagatttcttcagcagcgaaatgcttttcctcgtcattata |
11241139 |
T |
|
| Q |
321 |
attgacaacaatattgggtttgtcatttatgccaccaattactttaaatggccacaatttcatctcact |
389 |
Q |
| |
|
|| |||| | | || |||||||||| | | | ||||||||||| || |||||||| ||||| ||||| |
|
|
| T |
11241138 |
gttaacaatagtcatgtgtttgtcattcaggtcgccaattactttgaagggccacaacttcatatcact |
11241070 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 18 - 347
Target Start/End: Original strand, 11161310 - 11161651
Alignment:
| Q |
18 |
caaagtaccacctcctaaatcaaaaacaaaaacatgtttatggtcatgattaaacggtttcttgtcaagaccatatgcaattgcagctgctgtaggctcg |
117 |
Q |
| |
|
|||||||||||| ||||||| ||||| ||||||||| || |||||||||| |||||| ||||||||||||||||||||||| |||| ||||||| | |
|
|
| T |
11161310 |
caaagtaccaccacctaaataaaaaatgaaaacatgtatacatccatgattaaaaggtttcatgtcaagaccatatgcaattgcatctgcagtaggctag |
11161409 |
T |
|
| Q |
118 |
t--------tgattattcgcataacgttgagacgtgcaataacacctgcatctctagtagcttggcgt----tgcgagtcattaaagtaagcaggaacag |
205 |
Q |
| |
|
| |||||| ||||||||| || || | ||||| |||| ||||||| ||||| |||||| || || |||||||||| | ||| ||| |
|
|
| T |
11161410 |
tagagtcattgattactcgcataacattaaggccaacaatagcacccgcatctcgagtagactggcgtacgttgtgaaacattaaagtatgtaggcacaa |
11161509 |
T |
|
| Q |
206 |
ttataacgacatccttcactgttgatccaaggtaaacttctgcaatttcacgaatttttgtcaataccattgatgatatttgctcagcagaaaaatgttt |
305 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||| |||| ||||| || | ||||||||||||||||| ||||| |||| || |||| |||||| || |
|
|
| T |
11161510 |
ttataacaacatccttcactgttgatccaaggtaagcttcagcaatctcgcccatttttgtcaataccatggatgagatttcttctgcagcaaaatgctt |
11161609 |
T |
|
| Q |
306 |
ttcctctccattgtaattgacaacaatattgggtttgtcatt |
347 |
Q |
| |
|
|||||| |||| || || |||||||| ||||||||||||| |
|
|
| T |
11161610 |
ttcctcgtcattatagttaacaacaatcatgggtttgtcatt |
11161651 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1207 (Bit Score: 94; Significance: 9e-46; HSPs: 1)
Name: scaffold1207
Description:
Target: scaffold1207; HSP #1
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 88 - 341
Target Start/End: Original strand, 1128 - 1381
Alignment:
| Q |
88 |
ccatatgcaattgcagctgctgtaggctcgttgattattcgcataacgttgagacgtgcaataacacctgcatctctagtagcttggcgttgcgagtcat |
187 |
Q |
| |
|
|||||||||||||||||||| |||||||| |||| ||||| || ||| ||||| | |||||| |||||||||||| ||||| ||||||||| ||||||| |
|
|
| T |
1128 |
ccatatgcaattgcagctgcagtaggctcattgagtattcccaaaacattgaggccagcaatagcacctgcatctcgagtagattggcgttgtgagtcat |
1227 |
T |
|
| Q |
188 |
taaagtaagcaggaacagttataacgacatccttcactgttgatccaaggtaaacttctgcaatttcacgaatttttgtcaataccattgatgatatttg |
287 |
Q |
| |
|
||||||| ||||| ||||||||||| ||||||| |||||||||||||||| | ||||||| | || || ||||| | ||||||||| ||||| |||| |
|
|
| T |
1228 |
taaagtatgcaggcacagttataacaacatcctccactgttgatccaaggaaggcttctgctgtctcgcgcattttcgccaataccatggatgagatttc |
1327 |
T |
|
| Q |
288 |
ctcagcagaaaaatgtttttcctctccattgtaattgacaacaatattgggttt |
341 |
Q |
| |
|
||||||| |||||| |||||||| |||| || || |||||||| ||||||| |
|
|
| T |
1328 |
ttcagcagcaaaatgcttttcctcgtcattatagttaacaacaatcatgggttt |
1381 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 48; Significance: 3e-18; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 75 - 206
Target Start/End: Original strand, 39985876 - 39986007
Alignment:
| Q |
75 |
tttcttgtcaagaccatatgcaattgcagctgctgtaggctcgttgattattcgcataacgttgagacgtgcaataacacctgcatctctagtagcttgg |
174 |
Q |
| |
|
|||||||||||||||||| ||||| ||||| || || ||||| ||||| |||||||| || || |||| |||||||| || ||||| | |||||||| |
|
|
| T |
39985876 |
tttcttgtcaagaccataagcaatggcagcagcagtgggctcattgataattcgcatgacattaagaccggcaataactccagcatccttggtagcttga |
39985975 |
T |
|
| Q |
175 |
cgttgcgagtcattaaagtaagcaggaacagt |
206 |
Q |
| |
|
|| || |||||||||||||||||||| ||||| |
|
|
| T |
39985976 |
cgctgggagtcattaaagtaagcagggacagt |
39986007 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 79 - 320
Target Start/End: Complemental strand, 8017347 - 8017106
Alignment:
| Q |
79 |
ttgtcaagaccatatgcaattgcagctgctgtaggctcgttgattattcgcataacgttgagacgtgcaataacacctgcatctctagtagcttggcgtt |
178 |
Q |
| |
|
|||||||| || || ||||| || || ||||| ||||||||||| |||| || ||| ||||| | |||||| ||||| ||||| | || ||||| || | |
|
|
| T |
8017347 |
ttgtcaagtccgtacgcaatagctgcagctgttggctcgttgataattctcaaaacattgagtcctgcaatgacaccggcatcctttgtggcttgacgct |
8017248 |
T |
|
| Q |
179 |
gcgagtcattaaagtaagcaggaacagttataacgacatccttcactgttgatccaaggtaaacttctgcaatttcacgaatttttgtcaataccattga |
278 |
Q |
| |
|
|||| ||||| |||||||| ||||| || | |||| ||| |||||| ||||| || |||||| |||| ||||| ||||| || ||| | | |||||| || |
|
|
| T |
8017247 |
gcgaatcattgaagtaagctggaactgtaacaacggcattcttcacagttgaaccgaggtaagcttcagcaatctcacgcatctttatgagtaccataga |
8017148 |
T |
|
| Q |
279 |
tgatatttgctcagcagaaaaatgtttttcctctccattgta |
320 |
Q |
| |
|
|| |||| |||||||| ||| || || ||||| || ||||| |
|
|
| T |
8017147 |
cgaaatttcctcagcagcaaattgcttgtcctcacccttgta |
8017106 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 118 - 206
Target Start/End: Original strand, 8581973 - 8582061
Alignment:
| Q |
118 |
ttgattattcgcataacgttgagacgtgcaataacacctgcatctctagtagcttggcgttgcgagtcattaaagtaagcaggaacagt |
206 |
Q |
| |
|
|||||||| ||||| || ||||||| |||||| ||||||||||| |||| ||| ||||| || |||||||| |||||||| ||||| |
|
|
| T |
8581973 |
ttgattatccgcattacattgagacctgcaatttcacctgcatctttagtggctcttcgttgtgaatcattaaaataagcaggtacagt |
8582061 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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