View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2585_high_36 (Length: 313)
Name: NF2585_high_36
Description: NF2585
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2585_high_36 |
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Alignment Details
Target: chr8 (Bit Score: 249; Significance: 1e-138; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 16 - 297
Target Start/End: Original strand, 40319702 - 40319983
Alignment:
| Q |
16 |
tgatgttgacagaaacnnnnnnncaattttgctgccaaacaaacacaggaaatgtcttctaatcagacaaaggtcacaaacaatgtctgtagatcatcta |
115 |
Q |
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|||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| |
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| T |
40319702 |
tgatgttgacagaaacaaaaaaacaattttgctgccaaacaaacacaggaaatgtcttcgaatcagacaaaggtcactaacaatgtctgtagatcatcta |
40319801 |
T |
|
| Q |
116 |
ttaatagtgtgtgcgtacaagctattaccagtcagcatccatccaaattctatcggacttatatgtaaatcaattaacattcatagcttgacacatgtct |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40319802 |
ttaatagtgtgtgcgtacaagctattaccagtcagcatccatccaaattctatcggacttatatgtaaatcaattaacattcatagcttgacacatgtct |
40319901 |
T |
|
| Q |
216 |
aagtctaccataaccatacccctcaagtgtgaaactatttaggattggtttttcatgttttaattgacggtaccactttcat |
297 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
40319902 |
aagtctaccataaccatacccctcaagtgtgaaactatttaggattggtttttcatgttttaattaacggtaccactttcat |
40319983 |
T |
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