View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2585_high_38 (Length: 302)

Name: NF2585_high_38
Description: NF2585
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2585_high_38
NF2585_high_38
[»] chr5 (17 HSPs)
chr5 (18-257)||(41871678-41871917)
chr5 (254-302)||(14206396-14206445)
chr5 (254-294)||(34428156-34428197)
chr5 (255-294)||(29803222-29803262)
chr5 (191-253)||(6061531-6061593)
chr5 (253-302)||(12203153-12203203)
chr5 (217-251)||(12349548-12349582)
chr5 (249-294)||(19844343-19844389)
chr5 (254-299)||(38919859-38919905)
chr5 (257-302)||(43153075-43153121)
chr5 (254-302)||(372735-372784)
chr5 (254-302)||(4434478-4434527)
chr5 (258-302)||(8442170-8442215)
chr5 (254-302)||(13734375-13734424)
chr5 (258-294)||(17063865-17063902)
chr5 (254-302)||(14923079-14923127)
chr5 (259-302)||(33910103-33910147)
[»] chr2 (23 HSPs)
chr2 (254-298)||(4263883-4263927)
chr2 (256-302)||(13453779-13453825)
chr2 (217-257)||(14120827-14120867)
chr2 (253-300)||(19695708-19695756)
chr2 (250-302)||(42607545-42607598)
chr2 (256-302)||(694278-694325)
chr2 (257-302)||(10550474-10550520)
chr2 (257-302)||(15141472-15141518)
chr2 (257-302)||(22353190-22353236)
chr2 (253-302)||(27329124-27329174)
chr2 (257-290)||(1573704-1573737)
chr2 (254-302)||(8482247-8482296)
chr2 (258-302)||(10216864-10216909)
chr2 (254-290)||(18531597-18531634)
chr2 (258-294)||(22303203-22303240)
chr2 (215-252)||(34512716-34512753)
chr2 (254-302)||(40700203-40700252)
chr2 (258-302)||(45202147-45202192)
chr2 (217-257)||(1729549-1729589)
chr2 (256-300)||(27695975-27696019)
chr2 (255-302)||(28013964-28014012)
chr2 (256-299)||(29795445-29795489)
chr2 (258-301)||(39233729-39233773)
[»] chr8 (25 HSPs)
chr8 (254-302)||(40413364-40413413)
chr8 (256-302)||(14233659-14233706)
chr8 (256-302)||(37392143-37392190)
chr8 (257-302)||(7010684-7010730)
chr8 (254-298)||(29107991-29108036)
chr8 (189-253)||(5074900-5074964)
chr8 (255-302)||(5491281-5491329)
chr8 (256-299)||(9963694-9963738)
chr8 (255-302)||(14710908-14710956)
chr8 (252-302)||(11138901-11138952)
chr8 (253-302)||(13924017-13924067)
chr8 (257-302)||(35967421-35967464)
chr8 (258-302)||(6243045-6243090)
chr8 (258-302)||(9047085-9047130)
chr8 (258-294)||(13884194-13884231)
chr8 (254-302)||(32020480-32020529)
chr8 (196-253)||(39972135-39972192)
chr8 (258-302)||(41776186-41776231)
chr8 (254-302)||(45081076-45081125)
chr8 (249-277)||(67213-67241)
chr8 (190-250)||(13520690-13520750)
chr8 (190-250)||(13610225-13610285)
chr8 (258-301)||(37471654-37471698)
chr8 (255-302)||(38939204-38939252)
chr8 (259-302)||(39211054-39211098)
[»] chr6 (14 HSPs)
chr6 (257-302)||(6110528-6110573)
chr6 (258-302)||(32644623-32644668)
chr6 (255-300)||(3180020-3180066)
chr6 (256-300)||(1196056-1196101)
chr6 (254-302)||(12441534-12441583)
chr6 (258-299)||(1286923-1286965)
chr6 (252-294)||(8645303-8645345)
chr6 (199-253)||(31490671-31490725)
chr6 (257-290)||(9699368-9699401)
chr6 (257-294)||(23653927-23653964)
chr6 (254-294)||(27334854-27334895)
chr6 (254-294)||(27395594-27395635)
chr6 (255-294)||(8505808-8505848)
chr6 (255-294)||(15722537-15722577)
[»] chr4 (31 HSPs)
chr4 (261-302)||(7161540-7161581)
chr4 (258-294)||(52456961-52456997)
chr4 (255-294)||(18874956-18874995)
chr4 (255-294)||(35694627-35694666)
chr4 (256-302)||(4106052-4106098)
chr4 (199-253)||(39418104-39418158)
chr4 (258-302)||(4974111-4974156)
chr4 (257-302)||(41347482-41347527)
chr4 (258-297)||(12387685-12387725)
chr4 (258-294)||(42510959-42510995)
chr4 (255-294)||(44272844-44272884)
chr4 (185-253)||(44478770-44478838)
chr4 (256-302)||(31413801-31413848)
chr4 (256-298)||(41262648-41262691)
chr4 (256-294)||(42853937-42853976)
chr4 (257-294)||(15638160-15638198)
chr4 (256-294)||(33776906-33776944)
chr4 (257-302)||(42490919-42490965)
chr4 (266-302)||(1627573-1627610)
chr4 (254-302)||(4511821-4511870)
chr4 (258-302)||(15515795-15515840)
chr4 (258-302)||(32365682-32365727)
chr4 (256-296)||(33093136-33093177)
chr4 (258-302)||(1580298-1580342)
chr4 (259-302)||(5386385-5386429)
chr4 (255-302)||(14593293-14593341)
chr4 (260-300)||(17367091-17367131)
chr4 (255-294)||(20760252-20760292)
chr4 (255-294)||(20766643-20766683)
chr4 (255-294)||(38864770-38864810)
chr4 (254-302)||(46686241-46686289)
[»] chr7 (21 HSPs)
chr7 (254-302)||(26749013-26749061)
chr7 (257-302)||(45420075-45420121)
chr7 (254-302)||(2323300-2323349)
chr7 (254-302)||(27473100-27473148)
chr7 (259-302)||(38547305-38547349)
chr7 (240-302)||(2469685-2469748)
chr7 (254-300)||(19510374-19510421)
chr7 (256-302)||(41985115-41985162)
chr7 (196-234)||(33901337-33901375)
chr7 (257-294)||(40693562-40693600)
chr7 (254-302)||(3937136-3937185)
chr7 (258-302)||(8742394-8742439)
chr7 (254-302)||(37352005-37352054)
chr7 (254-294)||(37385267-37385308)
chr7 (258-302)||(37848635-37848680)
chr7 (257-294)||(40231740-40231777)
chr7 (254-302)||(43942645-43942693)
chr7 (255-298)||(23848086-23848130)
chr7 (255-294)||(37392040-37392080)
chr7 (255-294)||(44187688-44187728)
chr7 (259-298)||(49025333-49025373)
[»] chr1 (26 HSPs)
chr1 (255-302)||(50797788-50797836)
chr1 (256-294)||(35043754-35043792)
chr1 (254-302)||(43612095-43612144)
chr1 (258-302)||(48872043-48872088)
chr1 (249-302)||(30196715-30196770)
chr1 (254-302)||(36954667-36954714)
chr1 (255-302)||(40596069-40596117)
chr1 (256-299)||(110745-110787)
chr1 (256-294)||(35883641-35883680)
chr1 (256-302)||(45272175-45272222)
chr1 (257-302)||(4857921-4857967)
chr1 (253-302)||(11121487-11121537)
chr1 (256-294)||(27804861-27804899)
chr1 (258-302)||(16836130-16836175)
chr1 (254-294)||(18610769-18610810)
chr1 (258-302)||(29293959-29294004)
chr1 (258-302)||(40139126-40139171)
chr1 (258-294)||(40238438-40238475)
chr1 (258-302)||(41507209-41507254)
chr1 (259-300)||(51080107-51080148)
chr1 (251-302)||(3826830-3826882)
chr1 (255-302)||(4154589-4154637)
chr1 (198-254)||(21268277-21268333)
chr1 (198-254)||(36596648-36596704)
chr1 (217-253)||(40289163-40289199)
chr1 (259-302)||(51571416-51571460)
[»] scaffold0054 (1 HSPs)
scaffold0054 (256-302)||(31615-31662)
[»] chr3 (31 HSPs)
chr3 (255-302)||(53715336-53715383)
chr3 (199-257)||(29213346-29213404)
chr3 (254-302)||(46952945-46952994)
chr3 (254-294)||(50559246-50559287)
chr3 (255-294)||(45528976-45529016)
chr3 (255-302)||(50745557-50745605)
chr3 (256-302)||(1765402-1765449)
chr3 (256-298)||(44937217-44937260)
chr3 (259-302)||(51487760-51487802)
chr3 (257-298)||(11056941-11056983)
chr3 (257-302)||(35368621-35368667)
chr3 (257-294)||(42755654-42755692)
chr3 (257-302)||(47683800-47683846)
chr3 (257-298)||(50876381-50876423)
chr3 (257-294)||(3957829-3957866)
chr3 (254-294)||(7867745-7867786)
chr3 (258-298)||(9753167-9753208)
chr3 (254-283)||(27162702-27162731)
chr3 (254-302)||(31300812-31300858)
chr3 (254-294)||(38359340-38359381)
chr3 (257-302)||(38957527-38957572)
chr3 (254-302)||(49361850-49361899)
chr3 (256-300)||(55361250-55361295)
chr3 (255-294)||(7248-7288)
chr3 (217-253)||(4298407-4298443)
chr3 (189-253)||(12060035-12060099)
chr3 (255-294)||(27198194-27198234)
chr3 (255-294)||(31143267-31143307)
chr3 (255-294)||(32146020-32146060)
chr3 (259-302)||(35554130-35554174)
chr3 (185-253)||(50673149-50673217)
[»] scaffold0318 (1 HSPs)
scaffold0318 (255-302)||(18304-18353)
[»] scaffold0036 (1 HSPs)
scaffold0036 (254-294)||(18000-18041)
[»] scaffold0005 (1 HSPs)
scaffold0005 (255-302)||(224037-224085)


Alignment Details
Target: chr5 (Bit Score: 177; Significance: 2e-95; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 18 - 257
Target Start/End: Original strand, 41871678 - 41871917
Alignment:
Q  18 agatttcgttgctgagtaatttgtatgcgcatctctttcaccgttttgtgaactttaaagtctatcgtggtttgacgagctttatgatccaactcagaa- 116  Q
    ||||||||||| || |||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||     
T  41871678 agatttcgttgatgggtaatttgtatgcgtatctcttttaccgttttgtgaactttaaagtctgtcgtggtttgacgagctttatgatccaactcagaag 41871777  T
Q  117 aaaatatatttagtttctaggaggcatcaactggtctttatatttcttcttgagaggaacaagtgttattttagggaagtgctaaagagtgtcttttgga 216  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||    
T  41871778 aaaatatatttagtttctag-aggcatcaactagtctttatatttcttcttgagaggaacaagtgttattttagggaagtgttaaagagtgtccattgga 41871876  T
Q  217 cattggttaataggacaaatttaaaaatgttgtattgaaaa 257  Q
    |||||||||| || |||||||||||||||||||||| ||||    
T  41871877 cattggttaagagcacaaatttaaaaatgttgtattaaaaa 41871917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 254 - 302
Target Start/End: Original strand, 14206396 - 14206445
Alignment:
Q  254 aaaagagaaatgatatttgtacaa-tattttttgacaactttctctctca 302  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  14206396 aaaagagaaatgatatttgtacaaccattttttgacaactttctctctca 14206445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 254 - 294
Target Start/End: Original strand, 34428156 - 34428197
Alignment:
Q  254 aaaagagaaatgatatttgtacaa-tattttttgacaacttt 294  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  34428156 aaaagagaaatgatatttgtacaactattttttgacaacttt 34428197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 294
Target Start/End: Original strand, 29803222 - 29803262
Alignment:
Q  255 aaagagaaatgatatttgtacaa-tattttttgacaacttt 294  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  29803222 aaagagaaatgatatttgtacaactattttttgacaacttt 29803262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 253
Target Start/End: Complemental strand, 6061593 - 6061531
Alignment:
Q  191 ggaagtgctaaagagtgtcttttggacattggttaataggacaaatttaaaaatgttgtattg 253  Q
    |||| ||||||||| ||||||| ||||||||||||| | |  ||||||| |||||||||||||    
T  6061593 ggaaatgctaaagaatgtctttaggacattggttaagatggaaaatttagaaatgttgtattg 6061531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 302
Target Start/End: Original strand, 12203153 - 12203203
Alignment:
Q  253 gaaaagagaaatgatatttgtacaa-tattttttgacaactttctctctca 302  Q
    |||||||||||||||||||||||||  ||||||  ||||||||||||||||    
T  12203153 gaaaagagaaatgatatttgtacaaccatttttgtacaactttctctctca 12203203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 251
Target Start/End: Original strand, 12349548 - 12349582
Alignment:
Q  217 cattggttaataggacaaatttaaaaatgttgtat 251  Q
    |||||||||| ||||||||||||||||||||||||    
T  12349548 cattggttaagaggacaaatttaaaaatgttgtat 12349582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 294
Target Start/End: Complemental strand, 19844389 - 19844343
Alignment:
Q  249 tattgaaaagagaaatgatatttgtacaa-tattttttgacaacttt 294  Q
    |||| |||||||||||||||||||||||| |||||||||| ||||||    
T  19844389 tattcaaaagagaaatgatatttgtacaactattttttgataacttt 19844343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 299
Target Start/End: Original strand, 38919859 - 38919905
Alignment:
Q  254 aaaagagaaatgatatttgtacaa-tattttttgacaactttctctc 299  Q
    |||||||||||||||||||||||| |||||||  |||||||||||||    
T  38919859 aaaagagaaatgatatttgtacaactatttttgtacaactttctctc 38919905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 302
Target Start/End: Complemental strand, 43153121 - 43153075
Alignment:
Q  257 agagaaatgatatttgtacaatattttttg-acaactttctctctca 302  Q
    ||||||||||||||||||||| | |||||| ||||||||||||||||    
T  43153121 agagaaatgatatttgtacaacaatttttgtacaactttctctctca 43153075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 302
Target Start/End: Complemental strand, 372784 - 372735
Alignment:
Q  254 aaaagagaaatgatatttgtacaat-attttttgacaactttctctctca 302  Q
    |||||||||||||| |||||||||  ||||| ||||||||||||||||||    
T  372784 aaaagagaaatgatttttgtacaaccattttgtgacaactttctctctca 372735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 302
Target Start/End: Original strand, 4434478 - 4434527
Alignment:
Q  254 aaaagagaaatgatatttgtacaa-tattttttgacaactttctctctca 302  Q
    ||||||||||||||||||||||||  |||||||||||| ||| |||||||    
T  4434478 aaaagagaaatgatatttgtacaaccattttttgacaattttttctctca 4434527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 302
Target Start/End: Original strand, 8442170 - 8442215
Alignment:
Q  258 gagaaatgatatttgtacaa-tattttttgacaactttctctctca 302  Q
    |||||||||||||||||||| |||||||  ||||||||||||||||    
T  8442170 gagaaatgatatttgtacaattatttttgtacaactttctctctca 8442215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 302
Target Start/End: Complemental strand, 13734424 - 13734375
Alignment:
Q  254 aaaagagaaatgatatttgtacaa-tattttttgacaactttctctctca 302  Q
    ||||||||||||||||||||||||  | ||| ||||||||||||||||||    
T  13734424 aaaagagaaatgatatttgtacaaccactttatgacaactttctctctca 13734375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 294
Target Start/End: Original strand, 17063865 - 17063902
Alignment:
Q  258 gagaaatgatatttgtacaat-attttttgacaacttt 294  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  17063865 gagaaatgatatttgtacaatcattttttgacaacttt 17063902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 254 - 302
Target Start/End: Original strand, 14923079 - 14923127
Alignment:
Q  254 aaaagagaaatgatatttgtacaatattttttgacaactttctctctca 302  Q
    ||||||||||||||||||| ||||   ||||| ||||||||||||||||    
T  14923079 aaaagagaaatgatatttgaacaaccattttttacaactttctctctca 14923127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 302
Target Start/End: Complemental strand, 33910147 - 33910103
Alignment:
Q  259 agaaatgatatttgtacaat-attttttgacaactttctctctca 302  Q
    ||||||||||||||| |||  ||||||||||||||||||||||||    
T  33910147 agaaatgatatttgttcaaccattttttgacaactttctctctca 33910103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 254 - 298
Target Start/End: Complemental strand, 4263927 - 4263883
Alignment:
Q  254 aaaagagaaatgatatttgtacaatattttttgacaactttctct 298  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  4263927 aaaagagaaatgatatttgtacaacattttttgacaactttctct 4263883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 256 - 302
Target Start/End: Original strand, 13453779 - 13453825
Alignment:
Q  256 aagagaaatgatatttgtacaatattttttgacaactttctctctca 302  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||    
T  13453779 aagagaaatgatatttgtacaattttttttgacaactttttctctca 13453825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 217 - 257
Target Start/End: Original strand, 14120827 - 14120867
Alignment:
Q  217 cattggttaataggacaaatttaaaaatgttgtattgaaaa 257  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  14120827 cattggttaagaggacaaatttaaaaatgttgtattgaaaa 14120867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 253 - 300
Target Start/End: Complemental strand, 19695756 - 19695708
Alignment:
Q  253 gaaaagagaaatgatatttgtacaat-attttttgacaactttctctct 300  Q
    |||||||||||||||||||||||||| | ||||||||||||||||||||    
T  19695756 gaaaagagaaatgatatttgtacaatcactttttgacaactttctctct 19695708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 250 - 302
Target Start/End: Complemental strand, 42607598 - 42607545
Alignment:
Q  250 attgaaaagagaaatgatatttgtacaa-tattttttgacaactttctctctca 302  Q
    ||||| |||||||||||||||||||||| |||||| |||||| |||||||||||    
T  42607598 attgataagagaaatgatatttgtacaattattttgtgacaattttctctctca 42607545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 256 - 302
Target Start/End: Original strand, 694278 - 694325
Alignment:
Q  256 aagagaaatgatatttgtacaa-tattttttgacaactttctctctca 302  Q
    ||||||||||||||||||||||  |||||||||||| |||||||||||    
T  694278 aagagaaatgatatttgtacaaccattttttgacaattttctctctca 694325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 302
Target Start/End: Complemental strand, 10550520 - 10550474
Alignment:
Q  257 agagaaatgatatttgtacaa-tattttttgacaactttctctctca 302  Q
    ||||||||||||| ||||||| |||||||| ||||||||||||||||    
T  10550520 agagaaatgatatatgtacaactattttttcacaactttctctctca 10550474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 302
Target Start/End: Original strand, 15141472 - 15141518
Alignment:
Q  257 agagaaatgatatttgtacaa-tattttttgacaactttctctctca 302  Q
    ||||||||||||||||||||  |||||| ||||||||||||||||||    
T  15141472 agagaaatgatatttgtacatctattttatgacaactttctctctca 15141518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 302
Target Start/End: Complemental strand, 22353236 - 22353190
Alignment:
Q  257 agagaaatgatatttgtacaat-attttttgacaactttctctctca 302  Q
    |||||||||||||||||||||| ||||| |||||||||||| |||||    
T  22353236 agagaaatgatatttgtacaatcattttgtgacaactttctttctca 22353190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 302
Target Start/End: Complemental strand, 27329174 - 27329124
Alignment:
Q  253 gaaaagagaaatgatatttgtacaat-attttttgacaactttctctctca 302  Q
    |||||||||||||||||||||||||| |||||   ||||||||||||||||    
T  27329174 gaaaagagaaatgatatttgtacaatcattttggtacaactttctctctca 27329124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 290
Target Start/End: Original strand, 1573704 - 1573737
Alignment:
Q  257 agagaaatgatatttgtacaatattttttgacaa 290  Q
    |||||||||||||||||||||| |||||||||||    
T  1573704 agagaaatgatatttgtacaatcttttttgacaa 1573737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 302
Target Start/End: Complemental strand, 8482296 - 8482247
Alignment:
Q  254 aaaagagaaatgatatttgtacaa-tattttttgacaactttctctctca 302  Q
    ||||||||||||||||||||||||  | ||| ||||||||||||||||||    
T  8482296 aaaagagaaatgatatttgtacaaccactttatgacaactttctctctca 8482247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 302
Target Start/End: Original strand, 10216864 - 10216909
Alignment:
Q  258 gagaaatgatatttgtacaat-attttttgacaactttctctctca 302  Q
    ||||||||||||||||||||| | |||||||||| |||||||||||    
T  10216864 gagaaatgatatttgtacaatcactttttgacaattttctctctca 10216909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 290
Target Start/End: Original strand, 18531597 - 18531634
Alignment:
Q  254 aaaagagaaatgatatttgtacaa-tattttttgacaa 290  Q
    |||||||||||||||||||||||| |||||||||||||    
T  18531597 aaaagagaaatgatatttgtacaactattttttgacaa 18531634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 294
Target Start/End: Original strand, 22303203 - 22303240
Alignment:
Q  258 gagaaatgatatttgtacaa-tattttttgacaacttt 294  Q
    |||||||||||||||||||| |||||||||||||||||    
T  22303203 gagaaatgatatttgtacaactattttttgacaacttt 22303240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 252
Target Start/End: Complemental strand, 34512753 - 34512716
Alignment:
Q  215 gacattggttaataggacaaatttaaaaatgttgtatt 252  Q
    |||||||||||| |||||||||||| ||||||||||||    
T  34512753 gacattggttaagaggacaaatttagaaatgttgtatt 34512716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 302
Target Start/End: Original strand, 40700203 - 40700252
Alignment:
Q  254 aaaagagaaatgatatttgtacaa-tattttttgacaactttctctctca 302  Q
    |||||||||||| ||||||||||| |||||| | ||||||||||||||||    
T  40700203 aaaagagaaatggtatttgtacaactattttataacaactttctctctca 40700252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 302
Target Start/End: Complemental strand, 45202192 - 45202147
Alignment:
Q  258 gagaaatgatatttgtacaat-attttttgacaactttctctctca 302  Q
    ||||||||||||||||||||  ||||||| ||||||||||||||||    
T  45202192 gagaaatgatatttgtacaaccatttttttacaactttctctctca 45202147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 257
Target Start/End: Complemental strand, 1729589 - 1729549
Alignment:
Q  217 cattggttaataggacaaatttaaaaatgttgtattgaaaa 257  Q
    |||||||||| |||||||| ||| |||||||||||||||||    
T  1729589 cattggttaagaggacaaacttagaaatgttgtattgaaaa 1729549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 300
Target Start/End: Complemental strand, 27696019 - 27695975
Alignment:
Q  256 aagagaaatgatatttgtacaatattttttgacaactttctctct 300  Q
    ||||||||||||||||| ||||   ||||||||||||||||||||    
T  27696019 aagagaaatgatatttgaacaaccatttttgacaactttctctct 27695975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 302
Target Start/End: Original strand, 28013964 - 28014012
Alignment:
Q  255 aaagagaaatgatatttgtacaat-attttttgacaactttctctctca 302  Q
    |||||||||| ||||||||||||  | ||||||||||||||||||||||    
T  28013964 aaagagaaattatatttgtacaaccaatttttgacaactttctctctca 28014012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 299
Target Start/End: Original strand, 29795445 - 29795489
Alignment:
Q  256 aagagaaatgatatttgtacaa-tattttttgacaactttctctc 299  Q
    ||||||||||||||||||||||  ||||| |||||||||||||||    
T  29795445 aagagaaatgatatttgtacaaccattttgtgacaactttctctc 29795489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 258 - 301
Target Start/End: Complemental strand, 39233773 - 39233729
Alignment:
Q  258 gagaaatgatatttgtacaat-attttttgacaactttctctctc 301  Q
    |||||||||||||| |||||| |||||||||||||||| ||||||    
T  39233773 gagaaatgatatttttacaatcattttttgacaactttatctctc 39233729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000002; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 254 - 302
Target Start/End: Complemental strand, 40413413 - 40413364
Alignment:
Q  254 aaaagagaaatgatatttgtacaa-tattttttgacaactttctctctca 302  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  40413413 aaaagagaaatgatatttgtacaattattttgtgacaactttctctctca 40413364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 256 - 302
Target Start/End: Complemental strand, 14233706 - 14233659
Alignment:
Q  256 aagagaaatgatatttgtacaa-tattttttgacaactttctctctca 302  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||    
T  14233706 aagagaaatgatatttgtacaactatttttttacaactttctctctca 14233659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 256 - 302
Target Start/End: Complemental strand, 37392190 - 37392143
Alignment:
Q  256 aagagaaatgatatttgtacaat-attttttgacaactttctctctca 302  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||    
T  37392190 aagagaaatgatatttgtacaaccattttttgacaactttctctctca 37392143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 302
Target Start/End: Original strand, 7010684 - 7010730
Alignment:
Q  257 agagaaatgatatttgtacaat-attttttgacaactttctctctca 302  Q
    |||||||||||||||||||||| |||||||||||| |||||||||||    
T  7010684 agagaaatgatatttgtacaatcattttttgacaattttctctctca 7010730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 254 - 298
Target Start/End: Original strand, 29107991 - 29108036
Alignment:
Q  254 aaaagagaaatgatatttgtacaat-attttttgacaactttctct 298  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||    
T  29107991 aaaagagaaatgatatttgtacaatcattttttaacaactttctct 29108036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 253
Target Start/End: Complemental strand, 5074964 - 5074900
Alignment:
Q  189 agggaagtgctaaagagtgtcttttggacattggttaataggacaaatttaaaaatgttgtattg 253  Q
    |||||| |||||||||||| |||| || |||||||||| | |||||| ||| |||||||||||||    
T  5074964 agggaaatgctaaagagtgcctttagggcattggttaagatgacaaacttagaaatgttgtattg 5074900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 302
Target Start/End: Original strand, 5491281 - 5491329
Alignment:
Q  255 aaagagaaatgatatttgtacaat-attttttgacaactttctctctca 302  Q
    |||||||||| ||||||||||||| |||||||||||||||| |||||||    
T  5491281 aaagagaaattatatttgtacaataattttttgacaactttatctctca 5491329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 299
Target Start/End: Original strand, 9963694 - 9963738
Alignment:
Q  256 aagagaaatgatatttgtacaat-attttttgacaactttctctc 299  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||    
T  9963694 aagagaaatgatatttgtacaataattttttgacaattttctctc 9963738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 302
Target Start/End: Complemental strand, 14710956 - 14710908
Alignment:
Q  255 aaagagaaatgatatttgtacaat-attttttgacaactttctctctca 302  Q
    ||||| |||||||||||||||||| ||||| ||||||||||||||||||    
T  14710956 aaagataaatgatatttgtacaatcattttgtgacaactttctctctca 14710908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 252 - 302
Target Start/End: Original strand, 11138901 - 11138952
Alignment:
Q  252 tgaaaagagaaatgatatttgtacaa-tattttttgacaactttctctctca 302  Q
    |||||| | ||||||||||||||||| |||||| ||||||||||||||||||    
T  11138901 tgaaaaaaaaaatgatatttgtacaactattttgtgacaactttctctctca 11138952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 302
Target Start/End: Original strand, 13924017 - 13924067
Alignment:
Q  253 gaaaagagaaatgatatttgtacaa-tattttttgacaactttctctctca 302  Q
    |||||||||||||||||||||||||  ||||||  ||||||||||||||||    
T  13924017 gaaaagagaaatgatatttgtacaaccatttttgtacaactttctctctca 13924067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 302
Target Start/End: Complemental strand, 35967464 - 35967421
Alignment:
Q  257 agagaaatgatatttgtacaatattttttgacaactttctctctca 302  Q
    |||||||||||||||||||||   ||||||||||||||||||||||    
T  35967464 agagaaatgatatttgtacaac--tttttgacaactttctctctca 35967421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 302
Target Start/End: Original strand, 6243045 - 6243090
Alignment:
Q  258 gagaaatgatatttgtacaat-attttttgacaactttctctctca 302  Q
    ||||||||||||||||||||| ||||||  ||||||||||||||||    
T  6243045 gagaaatgatatttgtacaatcatttttgtacaactttctctctca 6243090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 302
Target Start/End: Complemental strand, 9047130 - 9047085
Alignment:
Q  258 gagaaatgatatttgtacaat-attttttgacaactttctctctca 302  Q
    ||||||||||||||||||||  | ||||||||||||||||||||||    
T  9047130 gagaaatgatatttgtacaaccactttttgacaactttctctctca 9047085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 294
Target Start/End: Complemental strand, 13884231 - 13884194
Alignment:
Q  258 gagaaatgatatttgtacaat-attttttgacaacttt 294  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  13884231 gagaaatgatatttgtacaatcattttttgacaacttt 13884194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 302
Target Start/End: Complemental strand, 32020529 - 32020480
Alignment:
Q  254 aaaagagaaatgatatttgtacaat-attttttgacaactttctctctca 302  Q
    |||| |||||||||||||||||||  ||||||||| ||||||||||||||    
T  32020529 aaaaaagaaatgatatttgtacaaccattttttgataactttctctctca 32020480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 253
Target Start/End: Original strand, 39972135 - 39972192
Alignment:
Q  196 tgctaaagagtgtcttttggacattggttaataggacaaatttaaaaatgttgtattg 253  Q
    |||||||||||| | || || |||||||||| | |||||||||| |||||||||||||    
T  39972135 tgctaaagagtgcccttagggcattggttaagaagacaaatttagaaatgttgtattg 39972192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 302
Target Start/End: Original strand, 41776186 - 41776231
Alignment:
Q  258 gagaaatgatatttgtacaa-tattttttgacaactttctctctca 302  Q
    |||||||||||||||||||| |||||||  ||||||||||||||||    
T  41776186 gagaaatgatatttgtacaactatttttgtacaactttctctctca 41776231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 302
Target Start/End: Original strand, 45081076 - 45081125
Alignment:
Q  254 aaaagagaaatgatatttgtacaat-attttttgacaactttctctctca 302  Q
    |||||||||||||||| |||||| | ||||||||||||||||| ||||||    
T  45081076 aaaagagaaatgatatatgtacattcattttttgacaactttccctctca 45081125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 249 - 277
Target Start/End: Complemental strand, 67241 - 67213
Alignment:
Q  249 tattgaaaagagaaatgatatttgtacaa 277  Q
    |||||||||||||||||||||||||||||    
T  67241 tattgaaaagagaaatgatatttgtacaa 67213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 250
Target Start/End: Complemental strand, 13520750 - 13520690
Alignment:
Q  190 gggaagtgctaaagagtgtcttttggacattggttaataggacaaatttaaaaatgttgta 250  Q
    ||||| ||||||| |||||| ||  |||||||||||| |||| ||||||| ||||||||||    
T  13520750 gggaaatgctaaaaagtgtccttaagacattggttaaaaggataaatttagaaatgttgta 13520690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 250
Target Start/End: Complemental strand, 13610285 - 13610225
Alignment:
Q  190 gggaagtgctaaagagtgtcttttggacattggttaataggacaaatttaaaaatgttgta 250  Q
    ||||| ||||||| |||||| ||  |||||||||||| |||| ||||||| ||||||||||    
T  13610285 gggaaatgctaaaaagtgtccttaagacattggttaaaaggataaatttagaaatgttgta 13610225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 258 - 301
Target Start/End: Original strand, 37471654 - 37471698
Alignment:
Q  258 gagaaatgatatttgtacaat-attttttgacaactttctctctc 301  Q
    ||||||||||||||||||||| ||||||  |||||||||||||||    
T  37471654 gagaaatgatatttgtacaatcatttttgtacaactttctctctc 37471698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 302
Target Start/End: Complemental strand, 38939252 - 38939204
Alignment:
Q  255 aaagagaaatgatatttgtacaa-tattttttgacaactttctctctca 302  Q
    ||||||||||||||||| ||||| |||||||  ||||||||||||||||    
T  38939252 aaagagaaatgatatttctacaactatttttgtacaactttctctctca 38939204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 302
Target Start/End: Original strand, 39211054 - 39211098
Alignment:
Q  259 agaaatgatatttgtacaat-attttttgacaactttctctctca 302  Q
    |||||||||||||| ||||  ||||||||||||||||||||||||    
T  39211054 agaaatgatatttgaacaaccattttttgacaactttctctctca 39211098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000002; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 257 - 302
Target Start/End: Complemental strand, 6110573 - 6110528
Alignment:
Q  257 agagaaatgatatttgtacaatattttttgacaactttctctctca 302  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||    
T  6110573 agagaaatgatatttgtacaatctttttcgacaactttctctctca 6110528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 258 - 302
Target Start/End: Original strand, 32644623 - 32644668
Alignment:
Q  258 gagaaatgatatttgtacaa-tattttttgacaactttctctctca 302  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    
T  32644623 gagaaatgatatttgtacaactattttttgacaactttctctctca 32644668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 255 - 300
Target Start/End: Complemental strand, 3180066 - 3180020
Alignment:
Q  255 aaagagaaatgatatttgtacaat-attttttgacaactttctctct 300  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||    
T  3180066 aaagagaaatgatatttgtacaatcattttttgacaactttatctct 3180020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 256 - 300
Target Start/End: Original strand, 1196056 - 1196101
Alignment:
Q  256 aagagaaatgatatttgtacaat-attttttgacaactttctctct 300  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||    
T  1196056 aagagaaatgatatttgtacaatcactttttgacaactttctctct 1196101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 254 - 302
Target Start/End: Original strand, 12441534 - 12441583
Alignment:
Q  254 aaaagagaaatgatatttgtacaa-tattttttgacaactttctctctca 302  Q
    |||||||||||||||||||||||| || ||| ||||||||||||||||||    
T  12441534 aaaagagaaatgatatttgtacaactactttgtgacaactttctctctca 12441583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 299
Target Start/End: Original strand, 1286923 - 1286965
Alignment:
Q  258 gagaaatgatatttgtacaat-attttttgacaactttctctc 299  Q
    ||||||||||||||| ||||| |||||||||||||||||||||    
T  1286923 gagaaatgatatttgaacaattattttttgacaactttctctc 1286965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 8645303 - 8645345
Alignment:
Q  252 tgaaaagagaaatgatatttgtacaatattttttgacaacttt 294  Q
    ||||||||||||||||||||| |||| | ||||||||||||||    
T  8645303 tgaaaagagaaatgatatttgaacaacactttttgacaacttt 8645345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 253
Target Start/End: Original strand, 31490671 - 31490725
Alignment:
Q  199 taaagagtgtcttttggacattggttaataggacaaatttaaaaatgttgtattg 253  Q
    ||||||||| | || ||||||||||||| |||||||| ||||||||| |||||||    
T  31490671 taaagagtgcccttaggacattggttaagaggacaaacttaaaaatgatgtattg 31490725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 290
Target Start/End: Complemental strand, 9699401 - 9699368
Alignment:
Q  257 agagaaatgatatttgtacaatattttttgacaa 290  Q
    |||||||||||||||| |||||||||||||||||    
T  9699401 agagaaatgatatttgaacaatattttttgacaa 9699368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 294
Target Start/End: Complemental strand, 23653964 - 23653927
Alignment:
Q  257 agagaaatgatatttgtacaatattttttgacaacttt 294  Q
    |||||||||||||||||||||| |||||||| ||||||    
T  23653964 agagaaatgatatttgtacaatcttttttgataacttt 23653927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 294
Target Start/End: Original strand, 27334854 - 27334895
Alignment:
Q  254 aaaagagaaatgatatttgtacaa-tattttttgacaacttt 294  Q
    |||||||||||||||||||||||| |||||| ||||||||||    
T  27334854 aaaagagaaatgatatttgtacaactattttgtgacaacttt 27334895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 294
Target Start/End: Original strand, 27395594 - 27395635
Alignment:
Q  254 aaaagagaaatgatatttgtacaa-tattttttgacaacttt 294  Q
    |||||||||||||||||||||||| |||||| ||||||||||    
T  27395594 aaaagagaaatgatatttgtacaactattttgtgacaacttt 27395635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 294
Target Start/End: Complemental strand, 8505848 - 8505808
Alignment:
Q  255 aaagagaaatgatatttgtacaat-attttttgacaacttt 294  Q
    |||||||||||||||||| ||||| ||||||||||||||||    
T  8505848 aaagagaaatgatatttgaacaatcattttttgacaacttt 8505808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 294
Target Start/End: Complemental strand, 15722577 - 15722537
Alignment:
Q  255 aaagagaaatgatatttgtacaat-attttttgacaacttt 294  Q
    |||||||||||||||||||||||| ||||| ||||||||||    
T  15722577 aaagagaaatgatatttgtacaatcattttgtgacaacttt 15722537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000002; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 261 - 302
Target Start/End: Complemental strand, 7161581 - 7161540
Alignment:
Q  261 aaatgatatttgtacaatattttttgacaactttctctctca 302  Q
    ||||||||||||||||||||||||| ||||||||||||||||    
T  7161581 aaatgatatttgtacaatatttttttacaactttctctctca 7161540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 258 - 294
Target Start/End: Complemental strand, 52456997 - 52456961
Alignment:
Q  258 gagaaatgatatttgtacaatattttttgacaacttt 294  Q
    |||||||||||||||||||||||||||||||||||||    
T  52456997 gagaaatgatatttgtacaatattttttgacaacttt 52456961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 294
Target Start/End: Complemental strand, 18874995 - 18874956
Alignment:
Q  255 aaagagaaatgatatttgtacaatattttttgacaacttt 294  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  18874995 aaagagaaatgatatttgtacaacattttttgacaacttt 18874956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 294
Target Start/End: Complemental strand, 35694666 - 35694627
Alignment:
Q  255 aaagagaaatgatatttgtacaatattttttgacaacttt 294  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  35694666 aaagagaaatgatatttgtacaatattttttaacaacttt 35694627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 302
Target Start/End: Original strand, 4106052 - 4106098
Alignment:
Q  256 aagagaaatgatatttgtacaatattttttgacaactttctctctca 302  Q
    ||||||||||||||||||||||| |||||| |||| |||||||||||    
T  4106052 aagagaaatgatatttgtacaatttttttttacaattttctctctca 4106098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 253
Target Start/End: Original strand, 39418104 - 39418158
Alignment:
Q  199 taaagagtgtcttttggacattggttaataggacaaatttaaaaatgttgtattg 253  Q
    ||||||||||| || ||||||||||||| || ||||||||| |||||||||||||    
T  39418104 taaagagtgtccttaggacattggttaagagtacaaatttagaaatgttgtattg 39418158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 258 - 302
Target Start/End: Original strand, 4974111 - 4974156
Alignment:
Q  258 gagaaatgatatttgtacaa-tattttttgacaactttctctctca 302  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||    
T  4974111 gagaaatgatatttgtacaactattttttaacaactttctctctca 4974156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 257 - 302
Target Start/End: Complemental strand, 41347527 - 41347482
Alignment:
Q  257 agagaaatgatatttgtacaatattttttgacaactttctctctca 302  Q
    |||||||| |||||||||||||  ||||||||||||||||||||||    
T  41347527 agagaaattatatttgtacaatcatttttgacaactttctctctca 41347482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 297
Target Start/End: Complemental strand, 12387725 - 12387685
Alignment:
Q  258 gagaaatgatatttgtacaat-attttttgacaactttctc 297  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  12387725 gagaaatgatatttgtacaatcattttttgacaactttctc 12387685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 294
Target Start/End: Complemental strand, 42510995 - 42510959
Alignment:
Q  258 gagaaatgatatttgtacaatattttttgacaacttt 294  Q
    ||||||||||||||||||||| |||||||||||||||    
T  42510995 gagaaatgatatttgtacaatcttttttgacaacttt 42510959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 294
Target Start/End: Complemental strand, 44272884 - 44272844
Alignment:
Q  255 aaagagaaatgatatttgtacaa-tattttttgacaacttt 294  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  44272884 aaagagaaatgatatttgtacaactattttttgacaacttt 44272844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 253
Target Start/End: Complemental strand, 44478838 - 44478770
Alignment:
Q  185 ttttagggaagtgctaaagagtgtcttttggacattggttaataggacaaatttaaaaatgttgtattg 253  Q
    ||||||| || || ||||||||||| |||  ||||| ||||| |||||||| |||||||||||||||||    
T  44478838 ttttaggaaaatgttaaagagtgtcctttcaacatttgttaagaggacaaacttaaaaatgttgtattg 44478770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 256 - 302
Target Start/End: Complemental strand, 31413848 - 31413801
Alignment:
Q  256 aagagaaatgatatttgtacaa-tattttttgacaactttctctctca 302  Q
    |||||||||||||||||||||| |||||||  ||||||||||||||||    
T  31413848 aagagaaatgatatttgtacaactatttttgtacaactttctctctca 31413801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 256 - 298
Target Start/End: Complemental strand, 41262691 - 41262648
Alignment:
Q  256 aagagaaatgatatttgtacaa-tattttttgacaactttctct 298  Q
    |||||||||||||||||||||| |||||| ||||||||||||||    
T  41262691 aagagaaatgatatttgtacaattattttgtgacaactttctct 41262648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 256 - 294
Target Start/End: Original strand, 42853937 - 42853976
Alignment:
Q  256 aagagaaatgatatttgtacaa-tattttttgacaacttt 294  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  42853937 aagagaaatgatatttgtacaactattttttgacaacttt 42853976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 294
Target Start/End: Original strand, 15638160 - 15638198
Alignment:
Q  257 agagaaatgatatttgtacaat-attttttgacaacttt 294  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  15638160 agagaaatgatatttgtacaatcattttttgacaacttt 15638198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 294
Target Start/End: Original strand, 33776906 - 33776944
Alignment:
Q  256 aagagaaatgatatttgtacaatattttttgacaacttt 294  Q
    |||||||||||||||||||||||||||||  ||||||||    
T  33776906 aagagaaatgatatttgtacaatatttttgtacaacttt 33776944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 302
Target Start/End: Original strand, 42490919 - 42490965
Alignment:
Q  257 agagaaatgatatttgtacaat-attttttgacaactttctctctca 302  Q
    |||||||||||||||||||||  | ||||||||||||||||||||||    
T  42490919 agagaaatgatatttgtacaaccactttttgacaactttctctctca 42490965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 302
Target Start/End: Complemental strand, 1627610 - 1627573
Alignment:
Q  266 atatttgtacaat-attttttgacaactttctctctca 302  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  1627610 atatttgtacaatcattttttgacaactttctctctca 1627573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 302
Target Start/End: Original strand, 4511821 - 4511870
Alignment:
Q  254 aaaagagaaatgatatttgtacaa-tattttttgacaactttctctctca 302  Q
    ||||||||||||||||||||| ||  ||||| ||||||||||||||||||    
T  4511821 aaaagagaaatgatatttgtataaccattttatgacaactttctctctca 4511870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 302
Target Start/End: Original strand, 15515795 - 15515840
Alignment:
Q  258 gagaaatgatatttgtacaa-tattttttgacaactttctctctca 302  Q
    ||||||||||||| |||||| |||||| ||||||||||||||||||    
T  15515795 gagaaatgatattggtacaactattttatgacaactttctctctca 15515840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 302
Target Start/End: Complemental strand, 32365727 - 32365682
Alignment:
Q  258 gagaaatgatatttgtacaat-attttttgacaactttctctctca 302  Q
    ||||||||||||||||||||  ||||| ||||||||||||||||||    
T  32365727 gagaaatgatatttgtacaaccattttgtgacaactttctctctca 32365682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 296
Target Start/End: Complemental strand, 33093177 - 33093136
Alignment:
Q  256 aagagaaatgatatttgtacaa-tattttttgacaactttct 296  Q
    |||||||||||||||||||||| |||||| ||||||||||||    
T  33093177 aagagaaatgatatttgtacaactattttgtgacaactttct 33093136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 258 - 302
Target Start/End: Complemental strand, 1580342 - 1580298
Alignment:
Q  258 gagaaatgatatttgtacaatattttttgacaactttctctctca 302  Q
    |||||||||||||||||||| | ||| |||||| |||||||||||    
T  1580342 gagaaatgatatttgtacaacactttgtgacaattttctctctca 1580298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 302
Target Start/End: Original strand, 5386385 - 5386429
Alignment:
Q  259 agaaatgatatttgtacaat-attttttgacaactttctctctca 302  Q
    |||||||||||||| ||||  ||||||||||||||||||||||||    
T  5386385 agaaatgatatttgaacaaccattttttgacaactttctctctca 5386429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 302
Target Start/End: Complemental strand, 14593341 - 14593293
Alignment:
Q  255 aaagagaaatgatatttgtacaatatt-ttttgacaactttctctctca 302  Q
    ||||||||||||||||| |||||  || |||||||||||||||||||||    
T  14593341 aaagagaaatgatatttatacaactttattttgacaactttctctctca 14593293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 300
Target Start/End: Original strand, 17367091 - 17367131
Alignment:
Q  260 gaaatgatatttgtacaatattttttgacaactttctctct 300  Q
    |||||||||||||||||  ||||| ||||||||||||||||    
T  17367091 gaaatgatatttgtacatcattttgtgacaactttctctct 17367131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 294
Target Start/End: Original strand, 20760252 - 20760292
Alignment:
Q  255 aaagagaaatgatatttgtacaa-tattttttgacaacttt 294  Q
    ||||||||||||||||||||||| |||||||| ||||||||    
T  20760252 aaagagaaatgatatttgtacaattattttttaacaacttt 20760292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 294
Target Start/End: Original strand, 20766643 - 20766683
Alignment:
Q  255 aaagagaaatgatatttgtacaa-tattttttgacaacttt 294  Q
    ||||||||||||||||||||||| |||||||| ||||||||    
T  20766643 aaagagaaatgatatttgtacaattattttttaacaacttt 20766683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 294
Target Start/End: Complemental strand, 38864810 - 38864770
Alignment:
Q  255 aaagagaaatgatatttgtacaa-tattttttgacaacttt 294  Q
    ||||||||||||||||||||||| |||||| ||||||||||    
T  38864810 aaagagaaatgatatttgtacaattattttgtgacaacttt 38864770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 254 - 302
Target Start/End: Original strand, 46686241 - 46686289
Alignment:
Q  254 aaaagagaaatgatatttgtacaatattttttgacaactttctctctca 302  Q
    ||||||||||||||||||||||||   ||||  ||||||||||||||||    
T  46686241 aaaagagaaatgatatttgtacaaccattttgtacaactttctctctca 46686289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.000000000007; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 254 - 302
Target Start/End: Original strand, 26749013 - 26749061
Alignment:
Q  254 aaaagagaaatgatatttgtacaatattttttgacaactttctctctca 302  Q
    ||||||||||||||||||| |||| | ||||||||||||||||||||||    
T  26749013 aaaagagaaatgatatttgaacaacaatttttgacaactttctctctca 26749061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 302
Target Start/End: Complemental strand, 45420121 - 45420075
Alignment:
Q  257 agagaaatgatatttgtacaa-tattttttgacaactttctctctca 302  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||    
T  45420121 agagaaatgatatttgaacaactattttttgacaactttctctctca 45420075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 254 - 302
Target Start/End: Original strand, 2323300 - 2323349
Alignment:
Q  254 aaaagagaaatgatatttgtacaa-tattttttgacaactttctctctca 302  Q
    ||||||||||||||||||||||||  ||||| ||||||||||||||||||    
T  2323300 aaaagagaaatgatatttgtacaacaattttatgacaactttctctctca 2323349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 302
Target Start/End: Original strand, 27473100 - 27473148
Alignment:
Q  254 aaaagagaaatgatatttgtacaatattttttgacaactttctctctca 302  Q
    |||||||||||||||||| ||||||  |||||||||||||| |||||||    
T  27473100 aaaagagaaatgatatttatacaattatttttgacaactttttctctca 27473148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 302
Target Start/End: Complemental strand, 38547349 - 38547305
Alignment:
Q  259 agaaatgatatttgtacaa-tattttttgacaactttctctctca 302  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||    
T  38547349 agaaatgatatttgtacaactattttttgacaactttctttctca 38547305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 302
Target Start/End: Original strand, 2469685 - 2469748
Alignment:
Q  240 aaaatgttgtattgaaaagagaaatgatatttgtacaa-tattttttgacaactttctctctca 302  Q
    |||| ||||| || ||||||||||||||||||||||||  | ||| ||||||||||||||||||    
T  2469685 aaaaggttgttttcaaaagagaaatgatatttgtacaaccactttgtgacaactttctctctca 2469748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 254 - 300
Target Start/End: Complemental strand, 19510421 - 19510374
Alignment:
Q  254 aaaagagaaatgatatttgtacaa-tattttttgacaactttctctct 300  Q
    |||||||||||||||||||||||| |||||| | ||||||||||||||    
T  19510421 aaaagagaaatgatatttgtacaattattttctcacaactttctctct 19510374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 256 - 302
Target Start/End: Complemental strand, 41985162 - 41985115
Alignment:
Q  256 aagagaaatgatatttgtacaat-attttttgacaactttctctctca 302  Q
    ||||||||||||||||||||||| | ||| ||||||||||||||||||    
T  41985162 aagagaaatgatatttgtacaatcaatttgtgacaactttctctctca 41985115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 234
Target Start/End: Complemental strand, 33901375 - 33901337
Alignment:
Q  196 tgctaaagagtgtcttttggacattggttaataggacaa 234  Q
    ||||||||||||||||| |||||||||||||||| ||||    
T  33901375 tgctaaagagtgtctttaggacattggttaatagaacaa 33901337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 294
Target Start/End: Complemental strand, 40693600 - 40693562
Alignment:
Q  257 agagaaatgatatttgtacaa-tattttttgacaacttt 294  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  40693600 agagaaatgatatttgtacaactattttttgacaacttt 40693562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 302
Target Start/End: Complemental strand, 3937185 - 3937136
Alignment:
Q  254 aaaagagaaatgatatttgtacaa-tattttttgacaactttctctctca 302  Q
    ||||||||||||||||||| |||  |||||| ||||||||||||||||||    
T  3937185 aaaagagaaatgatatttgaacatctattttgtgacaactttctctctca 3937136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 302
Target Start/End: Original strand, 8742394 - 8742439
Alignment:
Q  258 gagaaatgatatttgtacaa-tattttttgacaactttctctctca 302  Q
    |||||||||||||||||||| ||| ||||||||||||| |||||||    
T  8742394 gagaaatgatatttgtacaactatgttttgacaactttttctctca 8742439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 302
Target Start/End: Complemental strand, 37352054 - 37352005
Alignment:
Q  254 aaaagagaaatgatatttgtacaa-tattttttgacaactttctctctca 302  Q
    ||||||||||||||||||||||||  | ||| ||||||||||||||||||    
T  37352054 aaaagagaaatgatatttgtacaaccactttgtgacaactttctctctca 37352005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 294
Target Start/End: Complemental strand, 37385308 - 37385267
Alignment:
Q  254 aaaagagaaatgatatttgtacaa-tattttttgacaacttt 294  Q
    |||||| ||||||||||||||||| |||||||||||||||||    
T  37385308 aaaagataaatgatatttgtacaactattttttgacaacttt 37385267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 302
Target Start/End: Complemental strand, 37848680 - 37848635
Alignment:
Q  258 gagaaatgatatttgtacaat-attttttgacaactttctctctca 302  Q
    ||||||||||||||||||||| ||||||  ||||||||||||||||    
T  37848680 gagaaatgatatttgtacaatcatttttgtacaactttctctctca 37848635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 294
Target Start/End: Complemental strand, 40231777 - 40231740
Alignment:
Q  257 agagaaatgatatttgtacaatattttttgacaacttt 294  Q
    ||||||||||||||||||||||  ||||||||||||||    
T  40231777 agagaaatgatatttgtacaattatttttgacaacttt 40231740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 302
Target Start/End: Original strand, 43942645 - 43942693
Alignment:
Q  254 aaaagagaaatgatatttgtacaa-tattttttgacaactttctctctca 302  Q
    ||||||||||||||||||| |||| |||||||| ||||||||||||||||    
T  43942645 aaaagagaaatgatatttgaacaactatttttt-acaactttctctctca 43942693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 298
Target Start/End: Original strand, 23848086 - 23848130
Alignment:
Q  255 aaagagaaatgatatttgtacaat-attttttgacaactttctct 298  Q
    |||||||||||||||||||| ||| ||||||| ||||||||||||    
T  23848086 aaagagaaatgatatttgtataatcattttttaacaactttctct 23848130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 294
Target Start/End: Original strand, 37392040 - 37392080
Alignment:
Q  255 aaagagaaatgatatttgtacaa-tattttttgacaacttt 294  Q
    |||||||||||||||||||||||  ||||||||||||||||    
T  37392040 aaagagaaatgatatttgtacaaccattttttgacaacttt 37392080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 294
Target Start/End: Original strand, 44187688 - 44187728
Alignment:
Q  255 aaagagaaatgatatttgtacaat-attttttgacaacttt 294  Q
    ||||||||||||||| |||||||| ||||||||||||||||    
T  44187688 aaagagaaatgatatgtgtacaatcattttttgacaacttt 44187728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 298
Target Start/End: Complemental strand, 49025373 - 49025333
Alignment:
Q  259 agaaatgatatttgtacaa-tattttttgacaactttctct 298  Q
    ||||||||||||||||||| |||||| ||||||||||||||    
T  49025373 agaaatgatatttgtacaattattttatgacaactttctct 49025333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.000000000007; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 255 - 302
Target Start/End: Original strand, 50797788 - 50797836
Alignment:
Q  255 aaagagaaatgatatttgtacaat-attttttgacaactttctctctca 302  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  50797788 aaagagaaatgatatttgtacaatcattttgtgacaactttctctctca 50797836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 294
Target Start/End: Complemental strand, 35043792 - 35043754
Alignment:
Q  256 aagagaaatgatatttgtacaatattttttgacaacttt 294  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  35043792 aagagaaatgatatttgtacaatcttttttgacaacttt 35043754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 254 - 302
Target Start/End: Complemental strand, 43612144 - 43612095
Alignment:
Q  254 aaaagagaaatgatatttgtacaa-tattttttgacaactttctctctca 302  Q
    ||||||||||||||||||||||||  ||||| ||||||||||||||||||    
T  43612144 aaaagagaaatgatatttgtacaaccattttatgacaactttctctctca 43612095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 258 - 302
Target Start/End: Complemental strand, 48872088 - 48872043
Alignment:
Q  258 gagaaatgatatttgtacaat-attttttgacaactttctctctca 302  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||    
T  48872088 gagaaatgatatttgtacaaccattttttgacaactttctctctca 48872043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 302
Target Start/End: Original strand, 30196715 - 30196770
Alignment:
Q  249 tattgaaaagagaaatgatatttgtacaat--attttttgacaactttctctctca 302  Q
    ||||| || |||||||||||||| ||||||  ||||||||||||||||||||||||    
T  30196715 tattgtaatgagaaatgatatttctacaatcaattttttgacaactttctctctca 30196770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 302
Target Start/End: Original strand, 36954667 - 36954714
Alignment:
Q  254 aaaagagaaatgatatttgtacaatattttttgacaactttctctctca 302  Q
    |||||||||||||||||||||||| | |||||||||||||||| |||||    
T  36954667 aaaagagaaatgatatttgtacaaca-tttttgacaactttctttctca 36954714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 302
Target Start/End: Complemental strand, 40596117 - 40596069
Alignment:
Q  255 aaagagaaatgatatttgtacaa-tattttttgacaactttctctctca 302  Q
    |||||||||||||||||||||||  ||||| ||||||||||||||||||    
T  40596117 aaagagaaatgatatttgtacaaccattttgtgacaactttctctctca 40596069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 256 - 299
Target Start/End: Original strand, 110745 - 110787
Alignment:
Q  256 aagagaaatgatatttgtacaatattttttgacaactttctctc 299  Q
    |||||||||||||||||||||| | |||||||||||||||||||    
T  110745 aagagaaatgatatttgtacaaca-tttttgacaactttctctc 110787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 256 - 294
Target Start/End: Complemental strand, 35883680 - 35883641
Alignment:
Q  256 aagagaaatgatatttgtacaa-tattttttgacaacttt 294  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  35883680 aagagaaatgatatttgtacaattattttttgacaacttt 35883641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 256 - 302
Target Start/End: Complemental strand, 45272222 - 45272175
Alignment:
Q  256 aagagaaatgatatttgtacaat-attttttgacaactttctctctca 302  Q
    ||||||||||||||||||||||  | ||||||||||||||||||||||    
T  45272222 aagagaaatgatatttgtacaaccactttttgacaactttctctctca 45272175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 302
Target Start/End: Original strand, 4857921 - 4857967
Alignment:
Q  257 agagaaatgatatttgtacaat-attttttgacaactttctctctca 302  Q
    |||||||||||||||| ||||| | ||||||||||||||||||||||    
T  4857921 agagaaatgatatttgaacaatcactttttgacaactttctctctca 4857967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 302
Target Start/End: Original strand, 11121487 - 11121537
Alignment:
Q  253 gaaaagagaaatgatatttgtacaatattttttg-acaactttctctctca 302  Q
    ||||||||||||||||||||||||| |  ||||| ||||||||||||||||    
T  11121487 gaaaagagaaatgatatttgtacaacaacttttgtacaactttctctctca 11121537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 294
Target Start/End: Complemental strand, 27804899 - 27804861
Alignment:
Q  256 aagagaaatgatatttgtacaatattttttgacaacttt 294  Q
    |||| ||||||||||||||||| ||||||||||||||||    
T  27804899 aagataaatgatatttgtacaacattttttgacaacttt 27804861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 302
Target Start/End: Complemental strand, 16836175 - 16836130
Alignment:
Q  258 gagaaatgatatttgtacaat-attttttgacaactttctctctca 302  Q
    ||||||||||||||||||||| ||||| |||||||||| |||||||    
T  16836175 gagaaatgatatttgtacaatcattttgtgacaactttttctctca 16836130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 294
Target Start/End: Original strand, 18610769 - 18610810
Alignment:
Q  254 aaaagagaaatgatatttgtacaa-tattttttgacaacttt 294  Q
    |||||||||||||||||||||||| |||||| ||||||||||    
T  18610769 aaaagagaaatgatatttgtacaactattttgtgacaacttt 18610810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 302
Target Start/End: Original strand, 29293959 - 29294004
Alignment:
Q  258 gagaaatgatatttgtacaa-tattttttgacaactttctctctca 302  Q
    |||||||||||||||||||| || ||| ||||||||||||||||||    
T  29293959 gagaaatgatatttgtacaactactttatgacaactttctctctca 29294004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 302
Target Start/End: Original strand, 40139126 - 40139171
Alignment:
Q  258 gagaaatgatatttgtacaa-tattttttgacaactttctctctca 302  Q
    ||||||||||||||||||||  ||||| ||||||||||||||||||    
T  40139126 gagaaatgatatttgtacaaccattttatgacaactttctctctca 40139171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 294
Target Start/End: Original strand, 40238438 - 40238475
Alignment:
Q  258 gagaaatgatatttgtacaat-attttttgacaacttt 294  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  40238438 gagaaatgatatttgtacaatcattttttgacaacttt 40238475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 302
Target Start/End: Complemental strand, 41507254 - 41507209
Alignment:
Q  258 gagaaatgatatttgtacaat-attttttgacaactttctctctca 302  Q
    ||||||||||||||||||||  ||||| ||||||||||||||||||    
T  41507254 gagaaatgatatttgtacaaccattttgtgacaactttctctctca 41507209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 300
Target Start/End: Complemental strand, 51080148 - 51080107
Alignment:
Q  259 agaaatgatatttgtacaatattttttgacaactttctctct 300  Q
    |||||||||||||||||||   ||||||||||||||||||||    
T  51080148 agaaatgatatttgtacaactatttttgacaactttctctct 51080107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 251 - 302
Target Start/End: Complemental strand, 3826882 - 3826830
Alignment:
Q  251 ttgaaaagagaaatgatatttgtacaa-tattttttgacaactttctctctca 302  Q
    |||| |||||||||||||||||||||| || ||||| |||||||| |||||||    
T  3826882 ttgataagagaaatgatatttgtacaactaatttttaacaactttatctctca 3826830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 302
Target Start/End: Original strand, 4154589 - 4154637
Alignment:
Q  255 aaagagaaatgatatttgtacaat-attttttgacaactttctctctca 302  Q
    ||||||||||||||| |||||| | | ||||||||||||||||||||||    
T  4154589 aaagagaaatgatatatgtacatttactttttgacaactttctctctca 4154637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 254
Target Start/End: Original strand, 21268277 - 21268333
Alignment:
Q  198 ctaaagagtgtcttttggacattggttaataggacaaatttaaaaatgttgtattga 254  Q
    |||||||||| | || || |||||||||| |||||||| ||| ||||||||||||||    
T  21268277 ctaaagagtgcccttagggcattggttaagaggacaaacttagaaatgttgtattga 21268333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 254
Target Start/End: Complemental strand, 36596704 - 36596648
Alignment:
Q  198 ctaaagagtgtcttttggacattggttaataggacaaatttaaaaatgttgtattga 254  Q
    |||||||||| |||| |||||||| |||| | |||||| ||| ||||||||||||||    
T  36596704 ctaaagagtgcctttaggacattgattaagaagacaaacttagaaatgttgtattga 36596648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 253
Target Start/End: Complemental strand, 40289199 - 40289163
Alignment:
Q  217 cattggttaataggacaaatttaaaaatgttgtattg 253  Q
    |||||||||| |||| |||||||||||||||||||||    
T  40289199 cattggttaagaggataaatttaaaaatgttgtattg 40289163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 302
Target Start/End: Original strand, 51571416 - 51571460
Alignment:
Q  259 agaaatgatatttgtacaat-attttttgacaactttctctctca 302  Q
    |||||||||||||||||||  | ||||||||||||||||||||||    
T  51571416 agaaatgatatttgtacaaccactttttgacaactttctctctca 51571460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 256 - 302
Target Start/End: Complemental strand, 31662 - 31615
Alignment:
Q  256 aagagaaatgatatttgtacaat-attttttgacaactttctctctca 302  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||    
T  31662 aagagaaatgatatttgtacaaccattttttgacaactttctctctca 31615  T

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Target: chr3 (Bit Score: 36; Significance: 0.00000000003; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 302
Target Start/End: Original strand, 53715336 - 53715383
Alignment:
Q  255 aaagagaaatgatatttgtacaatattttttgacaactttctctctca 302  Q
    ||||||||||||||||||||||| ||||||||  ||||||||||||||    
T  53715336 aaagagaaatgatatttgtacaacattttttggtaactttctctctca 53715383  T

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Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 257
Target Start/End: Original strand, 29213346 - 29213404
Alignment:
Q  199 taaagagtgtcttttggacattggttaataggacaaatttaaaaatgttgtattgaaaa 257  Q
    ||||||||||| || || ||||||||||||||||||||||| ||| ||| |||||||||    
T  29213346 taaagagtgtccttagggcattggttaataggacaaatttagaaacgttatattgaaaa 29213404  T

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Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 254 - 302
Target Start/End: Original strand, 46952945 - 46952994
Alignment:
Q  254 aaaagagaaatgatatttgtacaa-tattttttgacaactttctctctca 302  Q
    ||||||||||||||||||||||||  ||||||||| ||||||||||||||    
T  46952945 aaaagagaaatgatatttgtacaaccattttttgataactttctctctca 46952994  T

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Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 254 - 294
Target Start/End: Complemental strand, 50559287 - 50559246
Alignment:
Q  254 aaaagagaaatgatatttgtacaa-tattttttgacaacttt 294  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  50559287 aaaagagaaatgatatttgtacaactattttttgacaacttt 50559246  T

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Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 294
Target Start/End: Complemental strand, 45529016 - 45528976
Alignment:
Q  255 aaagagaaatgatatttgtacaa-tattttttgacaacttt 294  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  45529016 aaagagaaatgatatttgtacaactattttttgacaacttt 45528976  T

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Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 302
Target Start/End: Original strand, 50745557 - 50745605
Alignment:
Q  255 aaagagaaatgatatttgtacaat-attttttgacaactttctctctca 302  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||||||    
T  50745557 aaagagaaatgatatttgtacaatcatttttgtacaactttctctctca 50745605  T

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Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 256 - 302
Target Start/End: Original strand, 1765402 - 1765449
Alignment:
Q  256 aagagaaatgatatttgtacaat-attttttgacaactttctctctca 302  Q
    ||||||||||||||||||||| | ||||| ||||||||||||||||||    
T  1765402 aagagaaatgatatttgtacattcattttgtgacaactttctctctca 1765449  T

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Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 256 - 298
Target Start/End: Original strand, 44937217 - 44937260
Alignment:
Q  256 aagagaaatgatatttgtacaa-tattttttgacaactttctct 298  Q
    ||||||||||||||||||||||  ||||||||||||||||||||    
T  44937217 aagagaaatgatatttgtacaacaattttttgacaactttctct 44937260  T

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Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 259 - 302
Target Start/End: Original strand, 51487760 - 51487802
Alignment:
Q  259 agaaatgatatttgtacaatattttttgacaactttctctctca 302  Q
    |||||||||||||||||| ||||||||||||| |||||||||||    
T  51487760 agaaatgatatttgtaca-tattttttgacaattttctctctca 51487802  T

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Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 298
Target Start/End: Complemental strand, 11056983 - 11056941
Alignment:
Q  257 agagaaatgatatttgtacaa-tattttttgacaactttctct 298  Q
    |||||||||||||||||||||  ||||||||||||||||||||    
T  11056983 agagaaatgatatttgtacaacaattttttgacaactttctct 11056941  T

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Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 302
Target Start/End: Original strand, 35368621 - 35368667
Alignment:
Q  257 agagaaatgatatttgtacaa-tattttttgacaactttctctctca 302  Q
    ||||||||||||||||||||| |||||||  ||||||||||||||||    
T  35368621 agagaaatgatatttgtacaactatttttgtacaactttctctctca 35368667  T

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Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 294
Target Start/End: Original strand, 42755654 - 42755692
Alignment:
Q  257 agagaaatgatatttgtacaata-ttttttgacaacttt 294  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  42755654 agagaaatgatatttgtacaatatttttttgacaacttt 42755692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 302
Target Start/End: Original strand, 47683800 - 47683846
Alignment:
Q  257 agagaaatgatatttgtacaa-tattttttgacaactttctctctca 302  Q
    |||||||||||||||||||||  ||||| ||||||||||||||||||    
T  47683800 agagaaatgatatttgtacaaccattttgtgacaactttctctctca 47683846  T

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Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 298
Target Start/End: Complemental strand, 50876423 - 50876381
Alignment:
Q  257 agagaaatgatatttgtacaa-tattttttgacaactttctct 298  Q
    |||||||||||||||||||||  ||||||||||||||||||||    
T  50876423 agagaaatgatatttgtacaacaattttttgacaactttctct 50876381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 294
Target Start/End: Original strand, 3957829 - 3957866
Alignment:
Q  257 agagaaatgatatttgtacaatattttttgacaacttt 294  Q
    |||||||||||||||||||||  |||||||||||||||    
T  3957829 agagaaatgatatttgtacaaccttttttgacaacttt 3957866  T

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Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 294
Target Start/End: Complemental strand, 7867786 - 7867745
Alignment:
Q  254 aaaagagaaatgatatttgtacaa-tattttttgacaacttt 294  Q
    |||||||||||||||||||||||| |||||| ||||||||||    
T  7867786 aaaagagaaatgatatttgtacaactattttgtgacaacttt 7867745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 298
Target Start/End: Original strand, 9753167 - 9753208
Alignment:
Q  258 gagaaatgatatttgtacaa-tattttttgacaactttctct 298  Q
    |||||||||||||||||||| ||| |||||||||||||||||    
T  9753167 gagaaatgatatttgtacaattatattttgacaactttctct 9753208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 283
Target Start/End: Original strand, 27162702 - 27162731
Alignment:
Q  254 aaaagagaaatgatatttgtacaatatttt 283  Q
    ||||||||||||||||||||||||||||||    
T  27162702 aaaagagaaatgatatttgtacaatatttt 27162731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 302
Target Start/End: Original strand, 31300812 - 31300858
Alignment:
Q  254 aaaagagaaatgatatttgtacaatattttttgacaactttctctctca 302  Q
    |||||||||||||||||||||||  | |||| |||||||||||||||||    
T  31300812 aaaagagaaatgatatttgtaca--acttttagacaactttctctctca 31300858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 294
Target Start/End: Complemental strand, 38359381 - 38359340
Alignment:
Q  254 aaaagagaaatgatatttgtacaat-attttttgacaacttt 294  Q
    ||||||||||||||||||||||||| ||||||| ||||||||    
T  38359381 aaaagagaaatgatatttgtacaatcattttttaacaacttt 38359340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 302
Target Start/End: Complemental strand, 38957572 - 38957527
Alignment:
Q  257 agagaaatgatatttgtacaatattttttgacaactttctctctca 302  Q
    |||||||||||||||||||||   |||||||||||||| |||||||    
T  38957572 agagaaatgatatttgtacaactatttttgacaactttttctctca 38957527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 302
Target Start/End: Complemental strand, 49361899 - 49361850
Alignment:
Q  254 aaaagagaaatgatatttgtacaat-attttttgacaactttctctctca 302  Q
    ||||||||||||||||||||||||| ||||||  |||||||| |||||||    
T  49361899 aaaagagaaatgatatttgtacaatcatttttgtacaactttttctctca 49361850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 300
Target Start/End: Complemental strand, 55361295 - 55361250
Alignment:
Q  256 aagagaaatgatatttgtacaa-tattttttgacaactttctctct 300  Q
    ||||||||||||||||||||||  |||| |||||||||||||||||    
T  55361295 aagagaaatgatatttgtacaaccatttcttgacaactttctctct 55361250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 294
Target Start/End: Complemental strand, 7288 - 7248
Alignment:
Q  255 aaagagaaatgatatttgtacaat-attttttgacaacttt 294  Q
    |||||||||||||||||||||||| ||||| ||||||||||    
T  7288 aaagagaaatgatatttgtacaatcattttctgacaacttt 7248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 253
Target Start/End: Complemental strand, 4298443 - 4298407
Alignment:
Q  217 cattggttaataggacaaatttaaaaatgttgtattg 253  Q
    |||||||||| | ||||||||||||||||||||||||    
T  4298443 cattggttaaaatgacaaatttaaaaatgttgtattg 4298407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 253
Target Start/End: Original strand, 12060035 - 12060099
Alignment:
Q  189 agggaagtgctaaagagtgtcttttggacattggttaataggacaaatttaaaaatgttgtattg 253  Q
    |||||| || ||||||||| |||| ||  ||||||||| |||||||||||| |||| ||||||||    
T  12060035 agggaaatgttaaagagtgcctttggggtattggttaagaggacaaatttagaaatattgtattg 12060099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 294
Target Start/End: Complemental strand, 27198234 - 27198194
Alignment:
Q  255 aaagagaaatgatatttgtacaat-attttttgacaacttt 294  Q
    |||||||||||||||||||||||| ||||||||| ||||||    
T  27198234 aaagagaaatgatatttgtacaatcattttttgataacttt 27198194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 294
Target Start/End: Original strand, 31143267 - 31143307
Alignment:
Q  255 aaagagaaatgatatttgtacaat-attttttgacaacttt 294  Q
    |||||||| ||||||||||||||| ||||||||||||||||    
T  31143267 aaagagaagtgatatttgtacaatcattttttgacaacttt 31143307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 294
Target Start/End: Complemental strand, 32146060 - 32146020
Alignment:
Q  255 aaagagaaatgatatttgtacaa-tattttttgacaacttt 294  Q
    |||||||||||||||||| |||| |||||||||||||||||    
T  32146060 aaagagaaatgatatttgaacaactattttttgacaacttt 32146020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 302
Target Start/End: Complemental strand, 35554174 - 35554130
Alignment:
Q  259 agaaatgatatttgtacaat-attttttgacaactttctctctca 302  Q
    |||||||||||||||| ||| | ||||||||||||||||||||||    
T  35554174 agaaatgatatttgtataatcactttttgacaactttctctctca 35554130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 253
Target Start/End: Complemental strand, 50673217 - 50673149
Alignment:
Q  185 ttttagggaagtgctaaagagtgtcttttggacattggttaataggacaaatttaaaaatgttgtattg 253  Q
    ||||| |||| |||||||||||| | || || |||||||||| | |  |||||||||||||||||||||    
T  50673217 ttttatggaaatgctaaagagtgcccttagggcattggttaagaaggtaaatttaaaaatgttgtattg 50673149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 302
Target Start/End: Complemental strand, 18353 - 18304
Alignment:
Q  255 aaagagaaatgatatttgtacaa--tattttttgacaactttctctctca 302  Q
    |||||||||||||||||||||||  | ||||||||||||||| |||||||    
T  18353 aaagagaaatgatatttgtacaaccttttttttgacaactttatctctca 18304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 294
Target Start/End: Original strand, 18000 - 18041
Alignment:
Q  254 aaaagagaaatgatatttgtacaa-tattttttgacaacttt 294  Q
    ||||||||||||||||||| |||| |||||||||||||||||    
T  18000 aaaagagaaatgatatttggacaattattttttgacaacttt 18041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 302
Target Start/End: Original strand, 224037 - 224085
Alignment:
Q  255 aaagagaaatgatatttgtacaatatt-ttttgacaactttctctctca 302  Q
    ||||||||||||||||| |||||  || |||||||||||||||||||||    
T  224037 aaagagaaatgatatttatacaactttattttgacaactttctctctca 224085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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