View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2585_high_43 (Length: 277)
Name: NF2585_high_43
Description: NF2585
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2585_high_43 |
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Alignment Details
Target: chr8 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 19 - 261
Target Start/End: Original strand, 8866315 - 8866557
Alignment:
| Q |
19 |
cacctgtcccatccccatcaactgtgagggacgtagttttatacatgcattatgcatagtcacgtaacccgtggccaaaccaagaagccaagtgtggcat |
118 |
Q |
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| T |
8866315 |
cacctgtcccatccccatcaactgtgagggacgtagttttatacatgcattatgcatagtcacgtaacccgtggccaaaccaagaagccaagtgtggcat |
8866414 |
T |
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| Q |
119 |
ggcatagttcaataatgttaagattctcgttatgatataaaatgttagtatagtatagtatagtgcggtcccccatcgcatgcaaaagcaaatctcttcg |
218 |
Q |
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| T |
8866415 |
ggcatagttcaataatgttaagattctcgttatgatataaaatgtaagtatagtatagtatagtgcggtcccccatcgcatgcaaaagcaaatctcttcg |
8866514 |
T |
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| Q |
219 |
ccttttgcttctgattgttgtccaatttaaaccctagtctgtg |
261 |
Q |
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|||||||||||||||||||||||||||||||||||||| |||| |
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| T |
8866515 |
ccttttgcttctgattgttgtccaatttaaaccctagtttgtg |
8866557 |
T |
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