View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2585_high_56 (Length: 232)

Name: NF2585_high_56
Description: NF2585
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2585_high_56
NF2585_high_56
[»] chr1 (47 HSPs)
chr1 (1-77)||(21255671-21255747)
chr1 (1-77)||(40605307-40605383)
chr1 (1-75)||(16987556-16987630)
chr1 (1-75)||(43640875-43640949)
chr1 (4-79)||(23554863-23554938)
chr1 (1-75)||(47059778-47059852)
chr1 (1-77)||(29253952-29254028)
chr1 (1-76)||(17526529-17526604)
chr1 (4-75)||(35043608-35043679)
chr1 (1-76)||(48325331-48325406)
chr1 (1-75)||(25988874-25988948)
chr1 (1-75)||(32966376-32966450)
chr1 (4-69)||(14002636-14002701)
chr1 (12-71)||(32939174-32939233)
chr1 (130-202)||(12381150-12381220)
chr1 (130-202)||(12385217-12385287)
chr1 (1-85)||(22389405-22389487)
chr1 (4-77)||(44730756-44730828)
chr1 (133-205)||(40289042-40289113)
chr1 (1-76)||(587008-587083)
chr1 (1-72)||(35846770-35846841)
chr1 (1-76)||(36930644-36930718)
chr1 (1-76)||(48872488-48872562)
chr1 (1-76)||(50527945-50528019)
chr1 (1-75)||(4604638-4604711)
chr1 (134-204)||(12363906-12363976)
chr1 (4-77)||(25061845-25061917)
chr1 (1-74)||(36230197-36230270)
chr1 (16-77)||(40238562-40238623)
chr1 (30-71)||(51168660-51168701)
chr1 (1-75)||(29632541-29632614)
chr1 (1-75)||(34941808-34941882)
chr1 (1-74)||(51339590-51339662)
chr1 (11-75)||(6313723-6313787)
chr1 (1-76)||(25702099-25702175)
chr1 (4-72)||(32821747-32821814)
chr1 (20-72)||(52368767-52368819)
chr1 (1-76)||(11460903-11460977)
chr1 (1-76)||(27352739-27352813)
chr1 (6-76)||(30687166-30687235)
chr1 (1-51)||(32216520-32216570)
chr1 (29-71)||(33076123-33076165)
chr1 (1-45)||(5477081-5477125)
chr1 (1-45)||(25995569-25995613)
chr1 (1-45)||(39010923-39010967)
chr1 (1-45)||(40610338-40610382)
chr1 (4-48)||(51038088-51038132)
[»] chr4 (32 HSPs)
chr4 (1-76)||(18874811-18874886)
chr4 (5-76)||(23220449-23220520)
chr4 (1-76)||(42510812-42510887)
chr4 (6-77)||(48148482-48148553)
chr4 (1-74)||(33860435-33860508)
chr4 (1-76)||(44272699-44272774)
chr4 (1-75)||(44495884-44495958)
chr4 (1-76)||(42854050-42854125)
chr4 (1-71)||(2613509-2613579)
chr4 (1-71)||(34028005-34028075)
chr4 (7-75)||(14593195-14593263)
chr4 (1-76)||(46567038-46567112)
chr4 (1-75)||(28676043-28676116)
chr4 (1-71)||(41609564-41609634)
chr4 (7-77)||(51389431-51389500)
chr4 (1-46)||(4896417-4896462)
chr4 (1-78)||(31275255-31275331)
chr4 (1-77)||(34259935-34260011)
chr4 (4-76)||(46173649-46173720)
chr4 (4-71)||(18880897-18880964)
chr4 (1-75)||(33438154-33438227)
chr4 (1-79)||(52456813-52456891)
chr4 (4-69)||(42915114-42915178)
chr4 (1-76)||(3475977-3476052)
chr4 (1-76)||(12638933-12639007)
chr4 (1-68)||(31658028-31658094)
chr4 (4-78)||(30778150-30778223)
chr4 (1-75)||(43983006-43983080)
chr4 (1-69)||(5234366-5234433)
chr4 (1-45)||(9162175-9162219)
chr4 (1-77)||(36364671-36364747)
chr4 (4-75)||(40847481-40847549)
[»] chr2 (36 HSPs)
chr2 (1-75)||(37631255-37631329)
chr2 (1-78)||(1574562-1574639)
chr2 (1-77)||(36763406-36763482)
chr2 (1-76)||(8555179-8555254)
chr2 (1-75)||(694378-694452)
chr2 (1-74)||(3960005-3960078)
chr2 (1-76)||(8352944-8353019)
chr2 (1-76)||(34913197-34913272)
chr2 (13-72)||(1052381-1052440)
chr2 (1-76)||(28165238-28165313)
chr2 (6-72)||(41493188-41493254)
chr2 (1-77)||(23358466-23358541)
chr2 (1-76)||(44059610-44059685)
chr2 (1-67)||(4263760-4263826)
chr2 (1-46)||(6365295-6365340)
chr2 (1-72)||(30856916-30856986)
chr2 (1-76)||(43791678-43791753)
chr2 (13-70)||(8482127-8482184)
chr2 (4-69)||(11164271-11164335)
chr2 (1-46)||(29795545-29795590)
chr2 (1-45)||(3091850-3091894)
chr2 (1-77)||(15283136-15283211)
chr2 (1-73)||(19668078-19668149)
chr2 (130-201)||(14120909-14120980)
chr2 (156-211)||(34353359-34353414)
chr2 (33-75)||(13454102-13454144)
chr2 (4-45)||(12600160-12600201)
chr2 (4-45)||(13711173-13711214)
chr2 (4-45)||(36133086-36133127)
chr2 (29-86)||(41042243-41042299)
chr2 (1-46)||(42251837-42251882)
chr2 (15-75)||(10983531-10983591)
chr2 (130-206)||(29260215-29260290)
chr2 (1-69)||(31296738-31296805)
chr2 (6-46)||(36435795-36435835)
chr2 (4-76)||(40951302-40951373)
[»] chr3 (44 HSPs)
chr3 (1-78)||(36869722-36869799)
chr3 (4-76)||(27198041-27198113)
chr3 (1-77)||(40785585-40785661)
chr3 (1-76)||(49457674-49457749)
chr3 (1-75)||(47276394-47276468)
chr3 (1-85)||(36799507-36799591)
chr3 (1-77)||(42102346-42102422)
chr3 (1-72)||(35376442-35376513)
chr3 (1-71)||(45528836-45528907)
chr3 (1-71)||(53715424-53715494)
chr3 (4-69)||(44127086-44127151)
chr3 (1-77)||(42755764-42755840)
chr3 (16-75)||(8868993-8869052)
chr3 (1-76)||(35987350-35987425)
chr3 (1-76)||(46473237-46473311)
chr3 (1-76)||(1295441-1295515)
chr3 (12-75)||(20216068-20216131)
chr3 (1-76)||(44593075-44593149)
chr3 (6-73)||(53870684-53870751)
chr3 (1-73)||(34627965-34628037)
chr3 (1-76)||(11173559-11173633)
chr3 (1-77)||(1901813-1901888)
chr3 (1-77)||(1911259-1911334)
chr3 (1-81)||(25959425-25959504)
chr3 (4-75)||(37035728-37035799)
chr3 (1-76)||(50294012-50294086)
chr3 (1-78)||(7231892-7231968)
chr3 (4-69)||(29706015-29706079)
chr3 (134-203)||(51877214-51877283)
chr3 (4-76)||(3958132-3958204)
chr3 (4-76)||(7867597-7867668)
chr3 (1-69)||(20380784-20380851)
chr3 (1-77)||(31326817-31326892)
chr3 (1-77)||(32795945-32796020)
chr3 (1-76)||(32981009-32981083)
chr3 (156-213)||(383454-383511)
chr3 (6-83)||(462282-462358)
chr3 (4-45)||(5188348-5188389)
chr3 (1-46)||(47849779-47849824)
chr3 (1-45)||(37215149-37215193)
chr3 (1-76)||(45150152-45150228)
chr3 (1-77)||(47683899-47683975)
chr3 (13-81)||(50279969-50280037)
chr3 (37-85)||(51032657-51032705)
[»] chr7 (37 HSPs)
chr7 (1-77)||(4678172-4678248)
chr7 (4-76)||(37392155-37392227)
chr7 (1-76)||(40693415-40693490)
chr7 (1-74)||(21588816-21588889)
chr7 (1-74)||(28110064-28110137)
chr7 (16-79)||(10619583-10619646)
chr7 (1-77)||(40077364-40077440)
chr7 (1-76)||(4971397-4971471)
chr7 (1-75)||(46148275-46148349)
chr7 (16-76)||(31329241-31329301)
chr7 (4-72)||(42467317-42467385)
chr7 (1-75)||(33056725-33056799)
chr7 (1-77)||(38547176-38547252)
chr7 (1-80)||(9031316-9031394)
chr7 (1-48)||(34304595-34304642)
chr7 (4-75)||(44564612-44564682)
chr7 (21-72)||(45154432-45154483)
chr7 (1-75)||(18157074-18157147)
chr7 (1-67)||(40949798-40949864)
chr7 (4-67)||(47905011-47905075)
chr7 (1-46)||(48866847-48866892)
chr7 (4-76)||(2469804-2469875)
chr7 (28-76)||(10591035-10591083)
chr7 (1-69)||(12141993-12142060)
chr7 (8-76)||(43079517-43079584)
chr7 (29-77)||(44495122-44495170)
chr7 (4-79)||(6655502-6655576)
chr7 (1-76)||(25940555-25940629)
chr7 (1-76)||(44187800-44187875)
chr7 (38-76)||(25332387-25332425)
chr7 (1-76)||(8792488-8792559)
chr7 (1-46)||(37856098-37856143)
chr7 (1-69)||(5978688-5978755)
chr7 (4-48)||(26123488-26123532)
chr7 (1-45)||(29034194-29034238)
chr7 (4-76)||(35072133-35072204)
chr7 (1-73)||(43107721-43107792)
[»] chr6 (20 HSPs)
chr6 (1-85)||(11742863-11742946)
chr6 (1-75)||(12044439-12044513)
chr6 (1-76)||(23653780-23653855)
chr6 (1-71)||(34490456-34490526)
chr6 (13-77)||(20712187-20712251)
chr6 (1-76)||(16743153-16743228)
chr6 (4-71)||(32644724-32644791)
chr6 (1-75)||(9188834-9188908)
chr6 (1-46)||(1897795-1897840)
chr6 (15-75)||(18272465-18272525)
chr6 (1-46)||(2582771-2582816)
chr6 (1-86)||(32729998-32730082)
chr6 (130-185)||(31490777-31490832)
chr6 (1-71)||(27334973-27335043)
chr6 (1-71)||(27395713-27395783)
chr6 (35-76)||(6110429-6110470)
chr6 (2-75)||(8173201-8173273)
chr6 (130-195)||(12226418-12226483)
chr6 (11-71)||(20006674-20006734)
chr6 (130-206)||(26539058-26539134)
[»] chr5 (37 HSPs)
chr5 (4-77)||(41460228-41460301)
chr5 (1-75)||(3960057-3960131)
chr5 (1-71)||(23991340-23991410)
chr5 (4-76)||(17063977-17064049)
chr5 (1-65)||(41210412-41210476)
chr5 (1-75)||(29803332-29803406)
chr5 (76-213)||(41871909-41872044)
chr5 (1-75)||(11880875-11880949)
chr5 (13-77)||(12827852-12827916)
chr5 (1-71)||(39595383-39595452)
chr5 (1-86)||(9636036-9636120)
chr5 (1-69)||(28811537-28811604)
chr5 (1-76)||(24792561-24792635)
chr5 (1-71)||(34428271-34428342)
chr5 (1-75)||(7144684-7144757)
chr5 (13-71)||(7766094-7766152)
chr5 (1-69)||(125201-125268)
chr5 (1-76)||(91324-91398)
chr5 (1-76)||(26626707-26626781)
chr5 (1-75)||(582758-582831)
chr5 (4-78)||(15639497-15639570)
chr5 (1-77)||(5698215-5698290)
chr5 (6-77)||(5996779-5996851)
chr5 (1-69)||(12779501-12779568)
chr5 (1-69)||(33567134-33567201)
chr5 (1-69)||(34381121-34381188)
chr5 (1-76)||(11464010-11464085)
chr5 (20-71)||(19824126-19824177)
chr5 (16-75)||(26627454-26627512)
chr5 (4-69)||(2117535-2117599)
chr5 (4-69)||(11306808-11306872)
chr5 (4-69)||(24431513-24431577)
chr5 (1-78)||(36581353-36581429)
chr5 (1-69)||(12718275-12718342)
chr5 (1-45)||(19376050-19376094)
chr5 (1-45)||(20719933-20719977)
chr5 (30-78)||(38387848-38387895)
[»] chr8 (38 HSPs)
chr8 (1-77)||(9000900-9000976)
chr8 (1-76)||(38174136-38174211)
chr8 (1-75)||(36524640-36524714)
chr8 (4-71)||(9895118-9895185)
chr8 (1-75)||(30578363-30578437)
chr8 (1-76)||(6849148-6849223)
chr8 (4-76)||(14548712-14548784)
chr8 (1-75)||(29108094-29108168)
chr8 (1-75)||(38844679-38844753)
chr8 (1-66)||(24503026-24503090)
chr8 (16-75)||(28418366-28418425)
chr8 (1-75)||(1796592-1796665)
chr8 (13-71)||(20284828-20284886)
chr8 (13-71)||(21071457-21071515)
chr8 (1-77)||(6005053-6005128)
chr8 (1-69)||(23258141-23258208)
chr8 (1-69)||(40413258-40413325)
chr8 (1-84)||(12045533-12045615)
chr8 (4-75)||(37392016-37392087)
chr8 (13-72)||(40671072-40671131)
chr8 (1-71)||(3206355-3206425)
chr8 (1-53)||(10344437-10344489)
chr8 (1-45)||(22767239-22767283)
chr8 (1-69)||(28927790-28927857)
chr8 (4-71)||(7678844-7678910)
chr8 (29-76)||(41955928-41955975)
chr8 (1-76)||(42443215-42443289)
chr8 (1-76)||(43605556-43605631)
chr8 (1-71)||(20994950-20995020)
chr8 (1-75)||(36740421-36740494)
chr8 (1-35)||(37524356-37524390)
chr8 (1-46)||(426210-426255)
chr8 (1-46)||(5359447-5359492)
chr8 (37-78)||(9048349-9048390)
chr8 (13-75)||(33854726-33854784)
chr8 (1-45)||(896016-896060)
chr8 (1-69)||(38128421-38128488)
chr8 (4-76)||(43587753-43587825)
[»] scaffold0318 (1 HSPs)
scaffold0318 (6-75)||(18179-18248)
[»] scaffold0241 (1 HSPs)
scaffold0241 (4-76)||(5341-5413)
[»] scaffold0005 (1 HSPs)
scaffold0005 (7-75)||(224115-224183)
[»] scaffold0166 (1 HSPs)
scaffold0166 (1-76)||(34944-35018)
[»] scaffold0184 (1 HSPs)
scaffold0184 (1-75)||(16483-16556)
[»] scaffold0078 (1 HSPs)
scaffold0078 (1-75)||(56288-56361)
[»] scaffold0076 (1 HSPs)
scaffold0076 (1-46)||(11301-11346)
[»] scaffold0016 (1 HSPs)
scaffold0016 (1-85)||(204325-204409)
[»] scaffold0057 (1 HSPs)
scaffold0057 (4-46)||(38991-39033)
[»] scaffold0036 (1 HSPs)
scaffold0036 (4-69)||(18116-18179)
[»] scaffold0026 (1 HSPs)
scaffold0026 (1-46)||(113734-113779)


Alignment Details
Target: chr1 (Bit Score: 69; Significance: 4e-31; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 21255747 - 21255671
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctcta 77  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  21255747 ttgaccaatgagaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttgttcaaatatcattgctcta 21255671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 40605383 - 40605307
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctcta 77  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  40605383 ttgaccaatgagaagagagaaaaagaaggttgtcataaaagttgttagcaaatggttgttcaaatatcattgctcta 40605307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 16987556 - 16987630
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctc 75  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||||||||| |||||||||||||||||    
T  16987556 ttgaccaatgaaaagagagaaaaaggaggttgtcatagaaattgttagcaaatggttgttcaaatatcattgctc 16987630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 43640949 - 43640875
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctc 75  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  43640949 ttgaccaatgaaaagagagaaaaatgaggttgtcatgaaagttgttagcaaatggttgttcaaatatcattgctc 43640875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 4 - 79
Target Start/End: Original strand, 23554863 - 23554938
Alignment:
Q  4 accaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctctatt 79  Q
    |||||||||| |||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  23554863 accaatgaaaggagagaaaaatgaggttgtcatgaaagttgttagcaaatggttgttcaaatatcattgctctatt 23554938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 47059852 - 47059778
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctc 75  Q
    ||||||||||||||||||||||||  || ||||||| |||||||||||||||||||| |||||||||||||||||    
T  47059852 ttgaccaatgaaaagagagaaaaataagattgtcatgaaagttgttagcaaatggttgttcaaatatcattgctc 47059778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 29254028 - 29253952
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctcta 77  Q
    |||| |||||| ||||||||||||||||||||||||  ||||||||||||||| ||| |||||||||||||||||||    
T  29254028 ttgatcaatgagaagagagaaaaaggaggttgtcattgaagttgttagcaaatagttgttcaaatatcattgctcta 29253952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 17526529 - 17526604
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctct 76  Q
    ||||||||| |||||||||||||| ||| ||||||||||| ||||||||||||| || ||||||||||||||||||    
T  17526529 ttgaccaataaaaagagagaaaaatgagattgtcataaaaattgttagcaaatgattgttcaaatatcattgctct 17526604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 75
Target Start/End: Complemental strand, 35043679 - 35043608
Alignment:
Q  4 accaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctc 75  Q
    |||||| |||||||||||||| ||||||||||| ||| |||||||||||||||| |||||||||||||||||    
T  35043679 accaataaaaagagagaaaaatgaggttgtcatgaaaattgttagcaaatggttgttcaaatatcattgctc 35043608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 48325331 - 48325406
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctct 76  Q
    ||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||| || |||||||| ||||||    
T  48325331 ttgaccaatgagaagagagaaaaaggaggttgtcattgaagttgttagcaaatggttgttaaaatatcactgctct 48325406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 25988948 - 25988874
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctc 75  Q
    ||||||||| |||| |||||||||||||||| |||| |||||||||||||||||||| || ||||||||||||||    
T  25988948 ttgaccaataaaaaaagagaaaaaggaggttatcattaaagttgttagcaaatggttgttaaaatatcattgctc 25988874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 32966376 - 32966450
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctc 75  Q
    ||||||||| |||||||||||||| |||||||||| |||||||||||| |||| ||| |||||||||||||||||    
T  32966376 ttgaccaataaaaagagagaaaaatgaggttgtcacaaaagttgttagtaaatagttgttcaaatatcattgctc 32966450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 14002701 - 14002636
Alignment:
Q  4 accaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatca 69  Q
    ||||||||||||||||||||| ||  |||||||||||||||||||||||| ||| |||||||||||    
T  14002701 accaatgaaaagagagaaaaatgaaattgtcataaaagttgttagcaaatagttgttcaaatatca 14002636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 32939233 - 32939174
Alignment:
Q  12 aaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcatt 71  Q
    ||||| ||||||| ||| |||||||||||||||||||||||||||| |||||||||||||    
T  32939233 aaagaaagaaaaaagagattgtcataaaagttgttagcaaatggttgttcaaatatcatt 32939174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 130 - 202
Target Start/End: Complemental strand, 12381220 - 12381150
Alignment:
Q  130 ttgttgaattcaatttaaacttaccatttttggtttccttgactagtgtcctaaaggcaccggttatcataac 202  Q
    ||||||||||||||  ||||||||||||||| |||| ||| ||||||||||||| ||||||||||| ||||||    
T  12381220 ttgttgaattcaat--aaacttaccattttttgtttacttaactagtgtcctaagggcaccggttagcataac 12381150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 130 - 202
Target Start/End: Complemental strand, 12385287 - 12385217
Alignment:
Q  130 ttgttgaattcaatttaaacttaccatttttggtttccttgactagtgtcctaaaggcaccggttatcataac 202  Q
    ||||||||||||||  ||||||||||||||| |||| ||| ||||||||||||| ||||||||||| ||||||    
T  12385287 ttgttgaattcaat--aaacttaccattttttgtttacttaactagtgtcctaagggcaccggttagcataac 12385217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 22389487 - 22389405
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctctattgaaaaa 85  Q
    |||||||||||||||||||||||| || ||||||| ||||||||  | ||||||||| ||||||||||||| |||| ||| ||||    
T  22389487 ttgaccaatgaaaagagagaaaaaagaagttgtcacaaaagttg--atcaaatggttgttcaaatatcattactcttttggaaaa 22389405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 44730756 - 44730828
Alignment:
Q  4 accaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctcta 77  Q
    ||||||||||| |||||||||| ||||||||| ||| |||| || ||||||||| |||||||||||||||||||    
T  44730756 accaatgaaaaaagagaaaaagaaggttgtcaaaaaggttg-taccaaatggttgttcaaatatcattgctcta 44730828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 133 - 205
Target Start/End: Complemental strand, 40289113 - 40289042
Alignment:
Q  133 ttgaattcaatttaaacttaccatttttggtttccttgactagtgtcctaaaggcaccggttatcataaccct 205  Q
    |||||||||||  |||||||||||||||  ||| ||| ||||||| |||||||||||||||||||||||||||    
T  40289113 ttgaattcaatgcaaacttaccattttttattttcttaactagtg-cctaaaggcaccggttatcataaccct 40289042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 587008 - 587083
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctct 76  Q
    ||||| ||| |||| ||||||||| ||| |||||| |||||||||||| |||| ||| ||||||||||||||||||    
T  587008 ttgacaaataaaaacagagaaaaatgagattgtcacaaaagttgttagtaaatagttgttcaaatatcattgctct 587083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 35846841 - 35846770
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattg 72  Q
    |||| |||| || |||| || ||| |||||| ||||||||||||||||||||||||| ||||||||||||||    
T  35846841 ttgatcaataaatagagtgagaaatgaggttatcataaaagttgttagcaaatggttgttcaaatatcattg 35846770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 36930718 - 36930644
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctct 76  Q
    ||||||||| ||||||||||||||| ||||||||| ||| |||| ||  |||||||| ||||||||||||||||||    
T  36930718 ttgaccaataaaaagagagaaaaagaaggttgtcaaaaaggttg-tacaaaatggttgttcaaatatcattgctct 36930644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 48872488 - 48872562
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctct 76  Q
    ||||||||||||||||||||||| | ||||||||| | | |||| || ||||||||| ||||||||||||||||||    
T  48872488 ttgaccaatgaaaagagagaaaaggaaggttgtcaaataggttg-tatcaaatggttgttcaaatatcattgctct 48872562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 50528019 - 50527945
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctct 76  Q
    ||||||||||||||||||||||||| ||||||||| || || |  |||||||||||| ||||||||| ||||||||    
T  50528019 ttgaccaatgaaaagagagaaaaagaaggttgtca-aatagattgtagcaaatggttgttcaaatatgattgctct 50527945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 4604638 - 4604711
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctc 75  Q
    ||||||||||||||||||||||||| ||||||||| | | |||| || ||||| ||| |||||||||||||||||    
T  4604638 ttgaccaatgaaaagagagaaaaagaaggttgtcaaacaggttg-taccaaatcgttgttcaaatatcattgctc 4604711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 134 - 204
Target Start/End: Complemental strand, 12363976 - 12363906
Alignment:
Q  134 tgaattcaatttaaacttaccatttttggtttccttgactagtgtcctaaaggcaccggttatcataaccc 204  Q
    |||||||||| | |||||||||||||| ||||  || ||||||||||||| ||||||||||| ||||||||    
T  12363976 tgaattcaatatcaacttaccattttttgtttatttaactagtgtcctaagggcaccggttagcataaccc 12363906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 25061845 - 25061917
Alignment:
Q  4 accaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctcta 77  Q
    |||||||||||||||||||||| ||||||||| || || |  || ||||||||| |||||||||||||||||||    
T  25061845 accaatgaaaagagagaaaaagaaggttgtca-aatagattgtatcaaatggttgttcaaatatcattgctcta 25061917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 36230270 - 36230197
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgct 74  Q
    ||||| ||| |||| |||||||||| | |||||||||||| ||||||| |||| ||| ||||||||||||||||    
T  36230270 ttgactaataaaaaaagagaaaaagaaagttgtcataaaaattgttagaaaatagttgttcaaatatcattgct 36230197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 40238562 - 40238623
Alignment:
Q  16 agagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctcta 77  Q
    ||||||||| ||||||||||| |||||||||| |||||| || ||||||||| |||||||||    
T  40238562 agagaaaaaagaggttgtcatcaaagttgttaacaaatgattgttcaaatatgattgctcta 40238623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 71
Target Start/End: Complemental strand, 51168701 - 51168660
Alignment:
Q  30 ttgtcataaaagttgttagcaaatggttattcaaatatcatt 71  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  51168701 ttgtcataaaagttgttagcaaatggttgttcaaatatcatt 51168660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 29632541 - 29632614
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctc 75  Q
    ||||||||| |||| ||||||||  || ||||||||| ||||||| | |||||||||||||| ||||||||||||    
T  29632541 ttgaccaataaaaatagagaaaattgaagttgtcatagaagttgtca-caaatggttattcatatatcattgctc 29632614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 34941882 - 34941808
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctc 75  Q
    ||||||||| | |||||||| ||| || ||||||||||||||||| | ||||||||| || ||||| ||||||||    
T  34941882 ttgaccaataagaagagagagaaatgaagttgtcataaaagttgtaaacaaatggttcttaaaataccattgctc 34941808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 51339662 - 51339590
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgct 74  Q
    ||||||||||||||||||||||| | ||||||||| | | |||| || ||||| ||| ||||||||||||||||    
T  51339662 ttgaccaatgaaaagagagaaaatgaaggttgtcaaataggttg-taccaaatagttgttcaaatatcattgct 51339590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 6313723 - 6313787
Alignment:
Q  11 aaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctc 75  Q
    |||| |||| |||| ||| ||||||| ||||||||||||||||| || |||||||||||| ||||    
T  6313723 aaaaaagagtaaaatgagtttgtcattaaagttgttagcaaatgattgttcaaatatcatagctc 6313787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 25702175 - 25702099
Alignment:
Q  1 ttgaccaatgaaaagaga-gaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctct 76  Q
    ||||||||| |||| ||| |||||| |||||| ||||  ||||||||||||||||||| || ||||||||| |||||    
T  25702175 ttgaccaataaaaaaagaagaaaaaagaggttatcattgaagttgttagcaaatggttgttaaaatatcatcgctct 25702099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 32821747 - 32821814
Alignment:
Q  4 accaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattg 72  Q
    |||||||||||||||||||| | | ||||||| | ||||| ||| ||||||||| ||||||||||||||    
T  32821747 accaatgaaaagagagaaaatgaatgttgtcaaataagtt-ttatcaaatggttgttcaaatatcattg 32821814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 52368767 - 52368819
Alignment:
Q  20 aaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattg 72  Q
    |||||| ||||||||||||||||| || |||||||||| || |||||||||||    
T  52368767 aaaaagaaggttgtcataaaagttattggcaaatggttgtttaaatatcattg 52368819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 11460903 - 11460977
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctct 76  Q
    ||||||||| |||||| ||| |||| ||||||||| ||||||||| | ||||| ||| ||||||||||||| ||||    
T  11460903 ttgaccaataaaaagaaagagaaagaaggttgtcaaaaaagttgt-atcaaattgttgttcaaatatcattcctct 11460977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 27352739 - 27352813
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctct 76  Q
    |||||||||||||||||||||||   ||||||||  | | ||||| | ||||||||| ||||||||||||||||||    
T  27352739 ttgaccaatgaaaagagagaaaagaaaggttgtcgaataggttgt-accaaatggttgttcaaatatcattgctct 27352813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 76
Target Start/End: Original strand, 30687166 - 30687235
Alignment:
Q  6 caatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctct 76  Q
    |||||| ||| ||||| ||| ||||||||| |||| |||| | ||||||||| ||||||||||||||||||    
T  30687166 caatgagaagggagaagaagaaggttgtcaaaaaatttgt-accaaatggttgttcaaatatcattgctct 30687235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 32216520 - 32216570
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaa 51  Q
    ||||||||| |||||||||| ||||||||||||| |  |||||||||||||    
T  32216520 ttgaccaattaaaagagagagaaaggaggttgtctttgaagttgttagcaa 32216570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 71
Target Start/End: Complemental strand, 33076165 - 33076123
Alignment:
Q  29 gttgtcataaaagttgttagcaaatggttattcaaatatcatt 71  Q
    |||||||||||||||||||| |||||||| | |||||||||||    
T  33076165 gttgtcataaaagttgttagaaaatggttgtacaaatatcatt 33076123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 5477125 - 5477081
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgt 45  Q
    ||||||||| |||||||||||||| || ||||||| |||||||||    
T  5477125 ttgaccaataaaaagagagaaaaaagaagttgtcacaaaagttgt 5477081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 25995569 - 25995613
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgt 45  Q
    ||||||||| ||||||||||||||  |||||||||| ||||||||    
T  25995569 ttgaccaataaaaagagagaaaaataaggttgtcattaaagttgt 25995613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 39010923 - 39010967
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgt 45  Q
    ||||||||||||||||||||||||  | ||||||| |||||||||    
T  39010923 ttgaccaatgaaaagagagaaaaaataagttgtcacaaaagttgt 39010967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 40610338 - 40610382
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgt 45  Q
    |||||||||||||||||||| ||| || ||||||| |||||||||    
T  40610338 ttgaccaatgaaaagagagagaaaagaagttgtcacaaaagttgt 40610382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 51038088 - 51038132
Alignment:
Q  4 accaatgaaaagagagaaaaaggaggttgtcataaaagttgttag 48  Q
    ||||||||||||||| ||||| |||||| ||||| ||||||||||    
T  51038088 accaatgaaaagagaaaaaaatgaggttatcatagaagttgttag 51038132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 64; Significance: 4e-28; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 18874886 - 18874811
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctct 76  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  18874886 ttgaccaatgagaagagagaaaaaggaggttgtcataaaagttgttagcaaatgattgttcaaatatcattgctct 18874811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 5 - 76
Target Start/End: Original strand, 23220449 - 23220520
Alignment:
Q  5 ccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctct 76  Q
    |||||||||| ||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  23220449 ccaatgaaaacagagaaaaatgaggttgtcatgaaagttgttagcaaatggttgttcaaatatcattgctct 23220520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 42510887 - 42510812
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctct 76  Q
    ||||| |||||||| ||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||    
T  42510887 ttgacaaatgaaaatagagaaaaaggaggtcgtcatcaaagttgttagcaaatggttgttcaaatatcattgctct 42510812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 6 - 77
Target Start/End: Original strand, 48148482 - 48148553
Alignment:
Q  6 caatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctcta 77  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||| ||||||||||    
T  48148482 caatgaaaagagagaaaaatgaggttatcataaaagttgttagcaaatggttgttcaaataccattgctcta 48148553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 33860508 - 33860435
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgct 74  Q
    ||||||||| | |||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  33860508 ttgaccaataataagagagaaaaatgaggttgtcatcaaagttgttagcaaatggttgttcaaatatcattgct 33860435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 44272774 - 44272699
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctct 76  Q
    ||||||||| | |||||||||||||||| ||||||| ||| |||||||||||||||| ||||||||||||||||||    
T  44272774 ttgaccaataataagagagaaaaaggagattgtcatcaaaattgttagcaaatggttgttcaaatatcattgctct 44272699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 44495958 - 44495884
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctc 75  Q
    ||||||||| | |||||| ||||||||| |||||||| ||||||||||||||||||| |||||||||||||||||    
T  44495958 ttgaccaataagaagagaaaaaaaggagattgtcatagaagttgttagcaaatggttgttcaaatatcattgctc 44495884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 42854050 - 42854125
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctct 76  Q
    |||||| |||| |||||||||||| || ||||||||| |||||||||||| |||||| ||||||||||||||||||    
T  42854050 ttgaccgatgagaagagagaaaaatgaagttgtcatagaagttgttagcacatggttgttcaaatatcattgctct 42854125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 2613579 - 2613509
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcatt 71  Q
    ||||||||| |||||||||| |||| || |||||| ||||||||||| ||||||||| |||||||||||||    
T  2613579 ttgaccaattaaaagagagagaaagtagattgtcacaaaagttgttatcaaatggttgttcaaatatcatt 2613509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 34028005 - 34028075
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcatt 71  Q
    ||||||||||| ||||||||||||||||||||||||  ||||||||| |||||| || || ||||||||||    
T  34028005 ttgaccaatgagaagagagaaaaaggaggttgtcattgaagttgttatcaaatgattgttaaaatatcatt 34028075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 14593263 - 14593195
Alignment:
Q  7 aatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctc 75  Q
    |||||||| ||||||||| ||  ||||||| |||||||||||||||| ||| |||||||||||||||||    
T  14593263 aatgaaaatagagaaaaaagaaattgtcatcaaagttgttagcaaattgttgttcaaatatcattgctc 14593195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 46567038 - 46567112
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctct 76  Q
    ||||||||||||||||||||||| | ||||||||| | | |||| || ||||||||| ||||||||||||||||||    
T  46567038 ttgaccaatgaaaagagagaaaaggaaggttgtcaaataggttg-taccaaatggttgttcaaatatcattgctct 46567112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 28676116 - 28676043
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctc 75  Q
    ||||||||||||||||||||||||| ||||||||| ||| |||| ||  |||||||| || ||||||||||||||    
T  28676116 ttgaccaatgaaaagagagaaaaagaaggttgtcaaaaaggttg-tacaaaatggttgtttaaatatcattgctc 28676043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 41609634 - 41609564
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcatt 71  Q
    ||||||||| ||||||||||||||| || |||||| |||| |||| | ||||||||| |||||||||||||    
T  41609634 ttgaccaattaaaagagagaaaaagtagattgtcacaaaaattgtcatcaaatggttgttcaaatatcatt 41609564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 77
Target Start/End: Original strand, 51389431 - 51389500
Alignment:
Q  7 aatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctcta 77  Q
    |||||||||||||||||| || ||||||| |||||||| || ||||||||| ||||||||||| |||||||    
T  51389431 aatgaaaagagagaaaaaagaagttgtcacaaaagttg-tatcaaatggttgttcaaatatcactgctcta 51389500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 4896462 - 4896417
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgtt 46  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||    
T  4896462 ttgaccaatgaaaagagagaaaaaagaggttgtcacaaaagttgtt 4896417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 31275255 - 31275331
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctctat 78  Q
    |||||||||||||||||||||||| ||  |||||| |||||||| || ||||||||| ||||||||||| | ||||||    
T  31275255 ttgaccaatgaaaagagagaaaaaagaaattgtcacaaaagttg-tatcaaatggttgttcaaatatcactactctat 31275331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 34259935 - 34260011
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctcta 77  Q
    ||||||||| | ||||||||||||| || |||||| ||||||||| | ||||||||| | ||||||||||| |||||    
T  34259935 ttgaccaataagaagagagaaaaagaagtttgtcacaaaagttgtcaccaaatggttgtacaaatatcattactcta 34260011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 46173649 - 46173720
Alignment:
Q  4 accaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctct 76  Q
    ||||||||||||||| ||||| ||  |||||| ||||||||| | ||||||||||||||||||||||| ||||    
T  46173649 accaatgaaaagagaaaaaaaagaaattgtcacaaaagttgt-atcaaatggttattcaaatatcattactct 46173720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 18880897 - 18880964
Alignment:
Q  4 accaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcatt 71  Q
    |||||| | |||||||||||| || ||||||||||||||||| |||||||  || |||||||||||||    
T  18880897 accaataagaagagagaaaaaagatgttgtcataaaagttgtaagcaaattattgttcaaatatcatt 18880964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 33438154 - 33438227
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctc 75  Q
    ||||||||| ||||||||||||| | ||||| ||| |||||||| || ||||||||| || ||||||||||||||    
T  33438154 ttgaccaataaaaagagagaaaatgaaggttatcaaaaaagttg-taccaaatggttgtttaaatatcattgctc 33438227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 52456891 - 52456813
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctctatt 79  Q
    ||||||||| |||| | | ||||||||| || |||| ||||||||||||||||  || ||||||||||||| |||||||    
T  52456891 ttgaccaataaaaaaataaaaaaaggagattatcattaaagttgttagcaaataattgttcaaatatcattactctatt 52456813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 42915178 - 42915114
Alignment:
Q  4 accaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatca 69  Q
    ||||||||||||||||||||| || ||||||| |||||||| || ||||| ||| |||||||||||    
T  42915178 accaatgaaaagagagaaaaaagaagttgtcacaaaagttg-tatcaaatagttgttcaaatatca 42915114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 3475977 - 3476052
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctct 76  Q
    |||||||||||||||| |||||||  ||||||||| ||| ||||| | ||||||||| |  |||||||||| ||||    
T  3475977 ttgaccaatgaaaagaaagaaaaataaggttgtcacaaatgttgtcatcaaatggttgtcaaaatatcattactct 3476052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 12638933 - 12639007
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctct 76  Q
    ||||||||||||||||||||||| | ||||||||| | | |||| || ||||| ||| ||||||||||||| ||||    
T  12638933 ttgaccaatgaaaagagagaaaatgaaggttgtcaaataggttg-taacaaatagttgttcaaatatcatttctct 12639007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 31658028 - 31658094
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatc 68  Q
    ||||||||||||||| |||||||| || ||||||| ||||| || || ||||||||| ||||||||||    
T  31658028 ttgaccaatgaaaagtgagaaaaaagaagttgtcacaaaagctg-tatcaaatggttgttcaaatatc 31658094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 30778223 - 30778150
Alignment:
Q  4 accaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctctat 78  Q
    |||||| |||||||||||||| ||  ||||||||||||||  || ||||| ||| ||||||||||||| ||||||    
T  30778223 accaataaaaagagagaaaaaagaaattgtcataaaagtt-atatcaaatagttgttcaaatatcattactctat 30778150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 43983006 - 43983080
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctc 75  Q
    ||||||||||| ||||||||| ||  || ||||| ||||||||||    |||||||| |||||||||||||||||    
T  43983006 ttgaccaatgagaagagagaacaactagattgtcctaaaagttgtaccaaaatggttgttcaaatatcattgctc 43983080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 5234433 - 5234366
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatca 69  Q
    ||||||||| ||||||||||||||  |  |||||| |||||||| || ||||||||| |||||||||||    
T  5234433 ttgaccaataaaaagagagaaaaaaaaaattgtcacaaaagttg-tatcaaatggttgttcaaatatca 5234366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 9162175 - 9162219
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgt 45  Q
    |||||||||||||||||||||||| || ||||||| |||| ||||    
T  9162175 ttgaccaatgaaaagagagaaaaaagaagttgtcacaaaaattgt 9162219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 36364747 - 36364671
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctcta 77  Q
    ||||||||| | |||||||||||   ||| ||||| ||||||||| | |||| |||| ||||||||||||| |||||    
T  36364747 ttgaccaataagaagagagaaaagataggctgtcacaaaagttgtcatcaaaaggttgttcaaatatcattactcta 36364671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 75
Target Start/End: Original strand, 40847481 - 40847549
Alignment:
Q  4 accaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctc 75  Q
    |||||||||||||||  ||||| ||||||||| ||| |||||   ||||||||| |||||||||||||||||    
T  40847481 accaatgaaaagaga--aaaagaaggttgtcaaaaaggttgtgt-caaatggttgttcaaatatcattgctc 40847549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 2e-27; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 37631329 - 37631255
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctc 75  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  37631329 ttgaccaatgagaagagagaaaaaagaggttgtcataaaagttgttagcaaatggttgttcaaatatcattgctc 37631255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 1574562 - 1574639
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctctat 78  Q
    ||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  1574562 ttgaccaatgaaaagagagtaaaatgaggttgtcattaaagttgttagcaaatggttgttcaaatatcattgctctat 1574639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 36763482 - 36763406
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctcta 77  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||| ||||||||| |||||||||||||||||||    
T  36763482 ttgaccaatgaaaagagagaaaaagaaggttgtcataaaaattgttaacaaatggttgttcaaatatcattgctcta 36763406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 8555254 - 8555179
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctct 76  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| ||||||  || ||||||||||||||||||    
T  8555254 ttgatcaatgaaaagagagaaaaaggaggttgtcataaaagttgttggcaaataattgttcaaatatcattgctct 8555179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 694378 - 694452
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctc 75  Q
    |||||||||||||| ||||| ||| |||||||||||||||||| |||||||||| || |||||||||||||||||    
T  694378 ttgaccaatgaaaaaagagataaatgaggttgtcataaaagttattagcaaatgattgttcaaatatcattgctc 694452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 3960005 - 3960078
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgct 74  Q
    |||| ||||||||||||||||||| ||  ||||||||||||||||| |||||||||| ||||||||||||||||    
T  3960005 ttgatcaatgaaaagagagaaaaatgaaattgtcataaaagttgttcgcaaatggttgttcaaatatcattgct 3960078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 8352944 - 8353019
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctct 76  Q
    |||| |||||| ||||||||||||| ||||||||||  ||||||||||||||||||| || |||||||||||||||    
T  8352944 ttgatcaatgagaagagagaaaaagaaggttgtcattgaagttgttagcaaatggttgttaaaatatcattgctct 8353019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 34913197 - 34913272
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctct 76  Q
    |||| |||||| |||||||||||| |||||||||||  ||||||||||||||||||| || |||||||||||||||    
T  34913197 ttgaacaatgagaagagagaaaaatgaggttgtcattgaagttgttagcaaatggttgttaaaatatcattgctct 34913272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 1052440 - 1052381
Alignment:
Q  13 aagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattg 72  Q
    |||||||||||| ||||||||||| |||||||||||||||||||| || |||||||||||    
T  1052440 aagagagaaaaatgaggttgtcattaaagttgttagcaaatggttgttaaaatatcattg 1052381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 28165238 - 28165313
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctct 76  Q
    ||||||||| |||||||||| |||  |||||||||| |||||||||||||||||||| ||||||||| ||| ||||    
T  28165238 ttgaccaataaaaagagagagaaaaaaggttgtcatgaaagttgttagcaaatggttgttcaaatattatttctct 28165313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 72
Target Start/End: Original strand, 41493188 - 41493254
Alignment:
Q  6 caatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattg 72  Q
    ||||||||||||||| ||| ||| |||||||| |||||||||||||||| || ||||||||||||||    
T  41493188 caatgaaaagagagagaaatgagattgtcatagaagttgttagcaaatgattgttcaaatatcattg 41493254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 23358541 - 23358466
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctcta 77  Q
    ||||||||||| ||||||||||||| || |||||||  ||||||||||||||||||| || |||||||||| |||||    
T  23358541 ttgaccaatgagaagagagaaaaag-agattgtcattgaagttgttagcaaatggttgttaaaatatcattcctcta 23358466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 44059685 - 44059610
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctct 76  Q
    ||||||||| ||||||||||||||| ||||||||| ||||||| | | ||||||||| ||||||||| ||| ||||    
T  44059685 ttgaccaattaaaagagagaaaaagtaggttgtcacaaaagttatcatcaaatggttgttcaaatataattactct 44059610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 4263826 - 4263760
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatat 67  Q
    ||||||||||| || ||||||||| || |||||||||||| |||||||||| ||||| |||||||||    
T  4263826 ttgaccaatgagaaaagagaaaaaagaagttgtcataaaaattgttagcaattggttgttcaaatat 4263760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 6365295 - 6365340
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgtt 46  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||    
T  6365295 ttgaccaataaaaagagagaaaaaagaggttgtcataaaagttgtt 6365340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 30856916 - 30856986
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattg 72  Q
    ||||||||||||||||||||||||| ||||||||| | || ||| || ||||||||| |||| |||||||||    
T  30856916 ttgaccaatgaaaagagagaaaaagaaggttgtcaaataaattg-taccaaatggttgttcatatatcattg 30856986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 43791753 - 43791678
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctct 76  Q
    ||||||||| ||||||||||||| | ||||||||| ||||||||| |  ||| |||| ||||||||||||| ||||    
T  43791753 ttgaccaataaaaagagagaaaaggtaggttgtcacaaaagttgtcactaaaaggttgttcaaatatcattactct 43791678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 8482184 - 8482127
Alignment:
Q  13 aagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcat 70  Q
    ||||||||||||  || |||||| |||||||||||| |||||||| ||||||||||||    
T  8482184 aagagagaaaaataagattgtcacaaaagttgttagtaaatggttgttcaaatatcat 8482127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 11164335 - 11164271
Alignment:
Q  4 accaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatca 69  Q
    ||||||||||||||||||||| || ||||||| |||||||| || ||||| ||| |||||||||||    
T  11164335 accaatgaaaagagagaaaaaagaagttgtcacaaaagttg-tatcaaatagttgttcaaatatca 11164271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 29795545 - 29795590
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgtt 46  Q
    |||||||||||||||||||||||| | |||||||| ||||||||||    
T  29795545 ttgaccaatgaaaagagagaaaaaagtggttgtcacaaaagttgtt 29795590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 3091850 - 3091894
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgt 45  Q
    |||||||||||||||||||||||| || ||||||| |||||||||    
T  3091850 ttgaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgt 3091894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 15283211 - 15283136
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctcta 77  Q
    ||||||||| |||| |||||||| | ||||||||| | || ||||  | ||||||||||||||||||||||||||||    
T  15283211 ttgaccaataaaaaaagagaaaaggaaggttgtcaaataaattgtacg-aaatggttattcaaatatcattgctcta 15283136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 19668149 - 19668078
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgc 73  Q
    ||||||||||||||||||||||| | ||||| ||| | | |||| || ||||||||| |||||||||||||||    
T  19668149 ttgaccaatgaaaagagagaaaaggaaggttatcaaataggttg-tatcaaatggttgttcaaatatcattgc 19668078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 201
Target Start/End: Original strand, 14120909 - 14120980
Alignment:
Q  130 ttgttgaattcaatttaaacttaccatttttggtttccttgactagtgtcctaaaggcaccggttatcataa 201  Q
    ||||| |||||||| |||| ||||||||||| |||||||| |||| |||||| ||| ||| ||||| |||||    
T  14120909 ttgttaaattcaatataaatttaccatttttagtttccttaactaatgtccttaagacactggttaacataa 14120980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 211
Target Start/End: Original strand, 34353359 - 34353414
Alignment:
Q  156 tttttggtttccttgactagtgtcctaaaggcaccggttatcataaccctatattt 211  Q
    |||||||||||||| || | || ||||||||||||||||| |||||||||| ||||    
T  34353359 tttttggtttccttaaccattgccctaaaggcaccggttagcataaccctaaattt 34353414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 75
Target Start/End: Original strand, 13454102 - 13454144
Alignment:
Q  33 tcataaaagttgttagcaaatggttattcaaatatcattgctc 75  Q
    ||||||||||||||| |||||| || |||||||||||||||||    
T  13454102 tcataaaagttgttaacaaatgattgttcaaatatcattgctc 13454144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 12600160 - 12600201
Alignment:
Q  4 accaatgaaaagagagaaaaaggaggttgtcataaaagttgt 45  Q
    ||||||||||||||||||||| || ||||||| |||||||||    
T  12600160 accaatgaaaagagagaaaaaagaagttgtcacaaaagttgt 12600201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 13711173 - 13711214
Alignment:
Q  4 accaatgaaaagagagaaaaaggaggttgtcataaaagttgt 45  Q
    ||||||||||||||||||||| || ||||||| |||||||||    
T  13711173 accaatgaaaagagagaaaaaagaagttgtcacaaaagttgt 13711214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 36133086 - 36133127
Alignment:
Q  4 accaatgaaaagagagaaaaaggaggttgtcataaaagttgt 45  Q
    ||||||||||||||||||||| || ||||||| |||||||||    
T  36133086 accaatgaaaagagagaaaaaagaagttgtcacaaaagttgt 36133127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 86
Target Start/End: Complemental strand, 41042299 - 41042243
Alignment:
Q  29 gttgtcataaaagttgttagcaaatggttattcaaatatcattgctctattgaaaaat 86  Q
    ||||||| |||||||||||  |||||||| ||||||||||||| |||||||| |||||    
T  41042299 gttgtcacaaaagttgttaa-aaatggttgttcaaatatcatttctctattgcaaaat 41042243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 42251882 - 42251837
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgtt 46  Q
    |||||||||||||||||||||||| || ||||||| | ||||||||    
T  42251882 ttgaccaatgaaaagagagaaaaaagaagttgtcacataagttgtt 42251837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 10983591 - 10983531
Alignment:
Q  15 gagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctc 75  Q
    ||||||||||| | |||||||| | | |||||||||||||||| || |||||||| |||||    
T  10983591 gagagaaaaagaaagttgtcattatacttgttagcaaatggttgttaaaatatcaatgctc 10983531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 206
Target Start/End: Original strand, 29260215 - 29260290
Alignment:
Q  130 ttgttgaattcaatttaaacttaccatttttggtttccttgactagtgtcctaaaggcaccggttatcataacccta 206  Q
    ||||||||||||||   |||||| |||||||||||||||| ||| ||  ||||| ||||| ||||| ||||||||||    
T  29260215 ttgttgaattcaatgcgaacttatcatttttggtttccttaacttgt-acctaagggcactggttagcataacccta 29260290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 31296805 - 31296738
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatca 69  Q
    |||||||||||||||||||||||| ||  |||||| | |||||| |  || ||||||||||||||||||    
T  31296805 ttgaccaatgaaaagagagaaaaaagaaattgtcacataagttg-tcccatatggttattcaaatatca 31296738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 36435795 - 36435835
Alignment:
Q  6 caatgaaaagagagaaaaaggaggttgtcataaaagttgtt 46  Q
    ||||||||||||||| ||| |||||||||| ||||||||||    
T  36435795 caatgaaaagagagagaaaagaggttgtcacaaaagttgtt 36435835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 40951302 - 40951373
Alignment:
Q  4 accaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctct 76  Q
    |||||||||||||||||||| | ||||||||| | | |||| || | ||||||| |||| |||||||||||||    
T  40951302 accaatgaaaagagagaaaaggaaggttgtcaaataggttg-tacctaatggttgttcatatatcattgctct 40951373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 6e-27; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 36869799 - 36869722
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctctat 78  Q
    |||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  36869799 ttgaccaatgaaaagagagagaaatgaggttgtcatgaaagttgttagcaaatggttgttcaaatatcattgctctat 36869722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 27198113 - 27198041
Alignment:
Q  4 accaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctct 76  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  27198113 accaatgaaaagagagaaaaatgaggttgtcataaaagttgttagcaaatgattgttcaaatatcattgctct 27198041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 40785661 - 40785585
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctcta 77  Q
    |||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||    
T  40785661 ttgaccaatgaaaatagagaaaaaggaggttgtcatcaaagtcgttagcaaatggttgttcaaatatcattgctcta 40785585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 49457674 - 49457749
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctct 76  Q
    |||||||||||||||||||||||| |||||||||||| ||||| |||||||||| || ||||||||||||||||||    
T  49457674 ttgaccaatgaaaagagagaaaaatgaggttgtcatagaagttattagcaaatgtttgttcaaatatcattgctct 49457749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 47276394 - 47276468
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctc 75  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||| ||| || |||||||||||||||||    
T  47276394 ttgaccaatgagaagagagaaaaaggaggttgtcatagaagttgttagcacatgattgttcaaatatcattgctc 47276468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 36799507 - 36799591
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctctattgaaaaa 85  Q
    |||||||||||||||||||||||| || |||||||| ||| ||||||||||||| || |||||||||||||||||| || |||||    
T  36799507 ttgaccaatgaaaagagagaaaaatgaagttgtcatgaaacttgttagcaaatgtttgttcaaatatcattgctctttttaaaaa 36799591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 42102346 - 42102422
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctcta 77  Q
    ||||||||| |||| | ||||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  42102346 ttgaccaataaaaaaaaagaaaaatgaggttgtcatgaaagttgttagcaaatggttgttcaaatatcattgctcta 42102422  T

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Target: chr3; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 35376513 - 35376442
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattg 72  Q
    ||||||||| |||||||||| ||| |||||||||||||||||||||| ||||||||| ||||||||||||||    
T  35376513 ttgaccaataaaaagagagagaaatgaggttgtcataaaagttgttaacaaatggttcttcaaatatcattg 35376442  T

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Target: chr3; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 45528907 - 45528836
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaa-ggaggttgtcataaaagttgttagcaaatggttattcaaatatcatt 71  Q
    ||||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||| |||||||||||||    
T  45528907 ttgaccaatgagaagagagaaaaaaggaggttgtcatagaagttgttagcaaatggttgttcaaatatcatt 45528836  T

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Target: chr3; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 53715424 - 53715494
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcatt 71  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||||||    
T  53715424 ttgactaatgagaagagagaaaaaggaggttgtcataaaagttgttatcaaatagttgttcaaatatcatt 53715494  T

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Target: chr3; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 44127151 - 44127086
Alignment:
Q  4 accaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatca 69  Q
    |||||||| |||||||||||| |||||||||||||||||||||||||||| ||| |||||||||||    
T  44127151 accaatgagaagagagaaaaatgaggttgtcataaaagttgttagcaaatagttgttcaaatatca 44127086  T

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Target: chr3; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 42755764 - 42755840
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctcta 77  Q
    ||||| ||| |||||| ||||||||||||||||||||||| || || ||||||| ||||||||||||||||||||||    
T  42755764 ttgacaaataaaaagaaagaaaaaggaggttgtcataaaaattattcgcaaatgattattcaaatatcattgctcta 42755840  T

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Target: chr3; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 8868993 - 8869052
Alignment:
Q  16 agagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctc 75  Q
    |||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||    
T  8868993 agagaaaaaggaggttgtcataaaagttattggcaaatggttgttcaaatatcattgctc 8869052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 35987350 - 35987425
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctct 76  Q
    ||||||||| |||||| |||||||| |||||||||||||| |||| |||||||| || ||||||||||||||||||    
T  35987350 ttgaccaataaaaagatagaaaaagaaggttgtcataaaaattgtaagcaaatgattgttcaaatatcattgctct 35987425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 46473237 - 46473311
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctct 76  Q
    |||||||||||||||||||||||| || |||||||||||||||| || ||||||||| ||||||||||||| ||||    
T  46473237 ttgaccaatgaaaagagagaaaaaagaagttgtcataaaagttg-tatcaaatggttgttcaaatatcattactct 46473311  T

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Target: chr3; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 1295441 - 1295515
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctct 76  Q
    |||||||||||||||| |||||||| ||||||||| ||  |||| |||||||||||| ||||||||||||||||||    
T  1295441 ttgaccaatgaaaagatagaaaaagaaggttgtcaaaattgttg-tagcaaatggttgttcaaatatcattgctct 1295515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 12 - 75
Target Start/End: Original strand, 20216068 - 20216131
Alignment:
Q  12 aaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctc 75  Q
    ||||||||||||| |||||||||| |||| ||||||| |||||||| |||||||||||||||||    
T  20216068 aaagagagaaaaatgaggttgtcacaaaaattgttagtaaatggttgttcaaatatcattgctc 20216131  T

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Target: chr3; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 44593075 - 44593149
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctct 76  Q
    |||||||||||||| |||||||| | ||||||||| |||||||| || |||||| |||||||||||||||||||||    
T  44593075 ttgaccaatgaaaatagagaaaatgaaggttgtcaaaaaagttg-taccaaatgattattcaaatatcattgctct 44593149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 6 - 73
Target Start/End: Original strand, 53870684 - 53870751
Alignment:
Q  6 caatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgc 73  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||||| || | ||||||| |||||    
T  53870684 caatgataagagagaaaaaggaggttgtcatcaaagttgttagcaaatgattgtgcaaatattattgc 53870751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 34628037 - 34627965
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgc 73  Q
    |||||||||||||||||||||||| | | ||||||| ||||||||||  |||| ||| |||||||||||||||    
T  34628037 ttgaccaatgaaaagagagaaaaatgtgattgtcatgaaagttgttaataaatagttgttcaaatatcattgc 34627965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 11173559 - 11173633
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctct 76  Q
    |||||||||||||||||||||||| || ||||||| |||||||| || ||||||||| ||||||||| ||| ||||    
T  11173559 ttgaccaatgaaaagagagaaaaaagaagttgtcacaaaagttg-tatcaaatggttgttcaaatattattactct 11173633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 1901888 - 1901813
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctcta 77  Q
    ||||||||||||||||||||||| | ||||||||| | | |||| || ||||||||| ||||||||| |||||||||    
T  1901888 ttgaccaatgaaaagagagaaaaggaaggttgtcaaataggttg-taccaaatggttgttcaaatattattgctcta 1901813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 1911334 - 1911259
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctcta 77  Q
    ||||||||||||||||||||||| | ||||||||| | | |||| || ||||||||| ||||||||| |||||||||    
T  1911334 ttgaccaatgaaaagagagaaaaggaaggttgtcaaataggttg-taccaaatggttgttcaaatattattgctcta 1911259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 25959504 - 25959425
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctctattga 81  Q
    ||||||||||||||||||||||| | | ||||||| | | ||||| | ||||||||| |||||||||||||||||| ||||    
T  25959504 ttgaccaatgaaaagagagaaaatgaaagttgtcaaataggttgt-atcaaatggttgttcaaatatcattgctcttttga 25959425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 75
Target Start/End: Original strand, 37035728 - 37035799
Alignment:
Q  4 accaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctc 75  Q
    |||||| ||||||||| ||||  | |||||||  |||||||||||||||| ||| |||||||||||||||||    
T  37035728 accaataaaaagagaggaaaaaaaagttgtcaagaaagttgttagcaaatagttgttcaaatatcattgctc 37035799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 50294086 - 50294012
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctct 76  Q
    |||| |||||||||||||||||||| | ||||||| | |||||| || ||||||||| || |||||||||||||||    
T  50294086 ttgatcaatgaaaagagagaaaaagaaagttgtcaaataagttg-taccaaatggttgttaaaatatcattgctct 50294012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 7231968 - 7231892
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctctat 78  Q
    ||||||||||||||||||||||||  |  |||||| |||||||| || ||||||||| ||||||||||| | ||||||    
T  7231968 ttgaccaatgaaaagagagaaaaaataaattgtcacaaaagttg-tatcaaatggttgttcaaatatcactactctat 7231892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 29706015 - 29706079
Alignment:
Q  4 accaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatca 69  Q
    ||||||||||||||||||||| || ||||||| |||||||| || ||||| ||| |||||||||||    
T  29706015 accaatgaaaagagagaaaaaagaagttgtcacaaaagttg-tatcaaatagttgttcaaatatca 29706079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 203
Target Start/End: Complemental strand, 51877283 - 51877214
Alignment:
Q  134 tgaattcaatttaaacttaccatttttggtttccttgactagtgtcctaaaggcaccggttatcataacc 203  Q
    ||||||||||  ||||| || |||||| |||||||| || |||| ||||||||||||||||| |||||||    
T  51877283 tgaattcaatacaaactaactatttttagtttccttaacgagtgccctaaaggcaccggttaacataacc 51877214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 3958132 - 3958204
Alignment:
Q  4 accaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctct 76  Q
    |||||| | |||||||||||| ||| ||||||| ||| |||||||||||| ||| |||||||| || ||||||    
T  3958132 accaattagaagagagaaaaatgagattgtcatgaaaattgttagcaaatagttgttcaaataccactgctct 3958204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 7867668 - 7867597
Alignment:
Q  4 accaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctct 76  Q
    |||||||||||||||||||| | ||||||||| | |  |||| | ||||||||| ||||||||||||||||||    
T  7867668 accaatgaaaagagagaaaatgaaggttgtcaaatagattgt-accaaatggttgttcaaatatcattgctct 7867597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 20380851 - 20380784
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatca 69  Q
    ||||||||||||||| |||||||| || ||||||| ||||||||||   |||||||| |||||||||||    
T  20380851 ttgaccaatgaaaagtgagaaaaaagaagttgtcacaaaagttgtt-taaaatggttgttcaaatatca 20380784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 31326817 - 31326892
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctcta 77  Q
    ||||||||||||||||||||||| | || |||||| | |  |||| | ||||||||| |||||||||||||||||||    
T  31326817 ttgaccaatgaaaagagagaaaatgaagattgtcaaatagattgt-accaaatggttgttcaaatatcattgctcta 31326892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 32795945 - 32796020
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctcta 77  Q
    ||||||||| ||||||||||||| | | ||||||| | | ||||| | ||||||||| |||||||||||||||||||    
T  32795945 ttgaccaataaaaagagagaaaatgaaagttgtcaaataggttgt-accaaatggttgttcaaatatcattgctcta 32796020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 32981083 - 32981009
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctct 76  Q
    ||||| ||||| ||| ||||| ||| ||||||||| |||| |||| | ||||||||| ||||||||||||||||||    
T  32981083 ttgacaaatgagaagggagaagaagaaggttgtcaaaaaatttgt-accaaatggttgttcaaatatcattgctct 32981009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 213
Target Start/End: Original strand, 383454 - 383511
Alignment:
Q  156 tttttggtttccttgactagtgtcctaaaggcaccggttatcataaccctatatttta 213  Q
    ||||| |||||||| || |||| |||| |||| ||||||| |||||||||||||||||    
T  383454 ttttttgtttccttaaccagtgccctagaggctccggttaacataaccctatatttta 383511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 462358 - 462282
Alignment:
Q  6 caatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctctattgaaa 83  Q
    ||||||||||||||||||   ||||||||| | | ||||| | ||||||||| |||||||||||||||| || |||||    
T  462358 caatgaaaagagagaaaagaaaggttgtcaaataggttgt-accaaatggttgttcaaatatcattgctataatgaaa 462282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 5188348 - 5188389
Alignment:
Q  4 accaatgaaaagagagaaaaaggaggttgtcataaaagttgt 45  Q
    ||||||||||||||||||||| || ||||||| |||||||||    
T  5188348 accaatgaaaagagagaaaaaagaagttgtcacaaaagttgt 5188389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 47849779 - 47849824
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgtt 46  Q
    |||||||||||||||||||||||| |||| ||||| || |||||||    
T  47849779 ttgaccaatgaaaagagagaaaaaagaggctgtcacaagagttgtt 47849824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 37215193 - 37215149
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgt 45  Q
    ||||||||||||||||||||||||  | ||||||| |||||||||    
T  37215193 ttgaccaatgaaaagagagaaaaaataagttgtcacaaaagttgt 37215149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 45150228 - 45150152
Alignment:
Q  1 ttgaccaatgaaaagagagaaa-aaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctct 76  Q
    ||||||||| |||||||||| | ||  | ||| |||| ||||||||||||||||| || ||||||||||||| ||||    
T  45150228 ttgaccaataaaaagagagagagaaaaaagttttcatgaaagttgttagcaaatgattgttcaaatatcatttctct 45150152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 47683899 - 47683975
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctcta 77  Q
    ||||||||| | |||||||||| || ||||||||  ||||||||| |  |||||||| | ||||||||||| |||||    
T  47683899 ttgaccaataagaagagagaaagagaaggttgtctcaaaagttgtcacaaaatggttgtacaaatatcattactcta 47683975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 50280037 - 50279969
Alignment:
Q  13 aagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctctattga 81  Q
    ||||||||||||  |||||||||| |||||||| |  |||||| | | |||||||||||||||| ||||    
T  50280037 aagagagaaaaacaaggttgtcattaaagttgtcatgaaatggatgtacaaatatcattgctcttttga 50279969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 85
Target Start/End: Original strand, 51032657 - 51032705
Alignment:
Q  37 aaaagttgttagcaaatggttattcaaatatcattgctctattgaaaaa 85  Q
    |||||||||||| |||||||| | ||||||||||| |||||| ||||||    
T  51032657 aaaagttgttagaaaatggttgtacaaatatcatttctctatagaaaaa 51032705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 2e-26; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 4678172 - 4678248
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctcta 77  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||    
T  4678172 ttgaccaatgaaaatagagaaaaaggaggttgtcatcaaagttgttagcaaatggttgtttaaatatcattgctcta 4678248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 37392155 - 37392227
Alignment:
Q  4 accaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctct 76  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  37392155 accaatgaaaagagagaaaaatgaggttgtcatgaaagttgttagcaaatggttgttcaaatatcattgctct 37392227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 40693490 - 40693415
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctct 76  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||| |||||| ||||||||||||||||||    
T  40693490 ttgaccaatgagaagagagaaaaaggaggttgtcatagaagttgttagcacatggttgttcaaatatcattgctct 40693415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 21588889 - 21588816
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgct 74  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||| |||||| ||||||||||||||||    
T  21588889 ttgaccaatgagaagagagaaaaaggaggttgtcatagaagttgttagcacatggttgttcaaatatcattgct 21588816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 28110064 - 28110137
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgct 74  Q
    |||||||||||||||||||| ||| ||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  28110064 ttgaccaatgaaaagagagagaaatgaggtcgtcataaaagttgttagcaaatggttgttcaaatatcattgct 28110137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 10619646 - 10619583
Alignment:
Q  16 agagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctctatt 79  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  10619646 agagaaaaaggaggttgtcataaaagttgttagcaaatggttgttcaaatatcattgccctatt 10619583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 40077364 - 40077440
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctcta 77  Q
    ||||||||| | |||| |||||||||||||||||||||||||||||| ||||||||| |||||||||||||| ||||    
T  40077364 ttgaccaataagaagaaagaaaaaggaggttgtcataaaagttgttaacaaatggttgttcaaatatcattgatcta 40077440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 4971397 - 4971471
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctct 76  Q
    ||||||||| ||| || |||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  4971397 ttgaccaataaaatgaaagaaaagggaggttg-cataaaagttgttagcaaatggttgttcaaatatcattgctct 4971471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 46148275 - 46148349
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctc 75  Q
    |||||||||||||||||||| |||  ||||||| || |||||||||| ||||||||| |||||||||||||||||    
T  46148275 ttgaccaatgaaaagagagagaaataaggttgttatgaaagttgttaacaaatggttgttcaaatatcattgctc 46148349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 31329301 - 31329241
Alignment:
Q  16 agagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctct 76  Q
    ||||||||| ||| ||||||||||||||||||| |||||||| ||||||||| ||||||||    
T  31329301 agagaaaaatgagattgtcataaaagttgttagtaaatggttgttcaaatattattgctct 31329241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 42467317 - 42467385
Alignment:
Q  4 accaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattg 72  Q
    |||||| | |||||||||||| |||||||||||  ||||| ||||||||||||| ||||||||||||||    
T  42467317 accaataagaagagagaaaaaagaggttgtcattgaagttattagcaaatggttgttcaaatatcattg 42467385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 33056725 - 33056799
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctc 75  Q
    ||||||||| |||| | || |||| ||||||||||| ||| || ||||||||||||| |||||||||||||||||    
T  33056725 ttgaccaataaaaaaacagtaaaatgaggttgtcattaaaattattagcaaatggttgttcaaatatcattgctc 33056799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 38547252 - 38547176
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctcta 77  Q
    ||||| ||||| ||||||||||||  || || ||||| ||||| |||||| |||||||||||||||||||| |||||    
T  38547252 ttgactaatgagaagagagaaaaaaaagattatcatagaagttattagcacatggttattcaaatatcattactcta 38547176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 9031316 - 9031394
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctctattg 80  Q
    ||||||||| ||||||||||||| | ||||||||| | |  |||| | ||||||||| ||||||||||||||||||||||    
T  9031316 ttgaccaataaaaagagagaaaatgaaggttgtcaaatagattgt-accaaatggttgttcaaatatcattgctctattg 9031394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 34304642 - 34304595
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttag 48  Q
    |||||||||||||||||||||||| |||||||||||| | ||||||||    
T  34304642 ttgaccaatgaaaagagagaaaaaagaggttgtcatagatgttgttag 34304595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 75
Target Start/End: Complemental strand, 44564682 - 44564612
Alignment:
Q  4 accaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctc 75  Q
    |||||| ||||| ||| |||| ||||||||||  ||||||||||||||||| || |||||||||||||||||    
T  44564682 accaataaaaag-gaggaaaaagaggttgtcaataaagttgttagcaaatgattgttcaaatatcattgctc 44564612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 72
Target Start/End: Complemental strand, 45154483 - 45154432
Alignment:
Q  21 aaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattg 72  Q
    |||| ||||||||||  |||||||||||||||||||| ||||||||||||||    
T  45154483 aaaaagaggttgtcaataaagttgttagcaaatggttgttcaaatatcattg 45154432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 18157147 - 18157074
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctc 75  Q
    ||||||||||||||||||||||| | ||||||||| | | |||| || ||||| ||| |||||||||||||||||    
T  18157147 ttgaccaatgaaaagagagaaaaggaaggttgtcaaataggttg-taccaaatagttgttcaaatatcattgctc 18157074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 40949864 - 40949798
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatat 67  Q
    ||||||||| | |||||  |||||||||||||||||| ||||||||| |||||||||  ||||||||    
T  40949864 ttgaccaataagaagaggaaaaaaggaggttgtcatagaagttgttatcaaatggttgctcaaatat 40949798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 47905075 - 47905011
Alignment:
Q  4 accaatgaaaagagagaaaaag--gaggttgtcataaaagttgttagcaaatggttattcaaatat 67  Q
    |||||||||||||||||||||   |||||||||||| ||||||||||||||| ||| |||||||||    
T  47905075 accaatgaaaagagagaaaaaaatgaggttgtcatagaagttgttagcaaat-gttgttcaaatat 47905011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 48866892 - 48866847
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgtt 46  Q
    ||||| |||||||||||||||||| |||||||||| ||||||||||    
T  48866892 ttgactaatgaaaagagagaaaaaagaggttgtcacaaaagttgtt 48866847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 2469804 - 2469875
Alignment:
Q  4 accaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctct 76  Q
    ||||||||||| |||||||| | ||||||||| | | ||||| | ||||||||| ||||||||||||||||||    
T  2469804 accaatgaaaatagagaaaaggaaggttgtcaaataggttgt-accaaatggttgttcaaatatcattgctct 2469875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 76
Target Start/End: Complemental strand, 10591083 - 10591035
Alignment:
Q  28 ggttgtcataaaagttgttagcaaatggttattcaaatatcattgctct 76  Q
    |||||||||||||||||| | ||||| ||| ||||||||||||||||||    
T  10591083 ggttgtcataaaagttgtcaccaaatagttgttcaaatatcattgctct 10591035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 12141993 - 12142060
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatca 69  Q
    |||||||||||||||| |||||||  | ||||||| |||||||| || ||||||||| |||||||||||    
T  12141993 ttgaccaatgaaaagaaagaaaaaaaaagttgtcacaaaagttg-tatcaaatggttgttcaaatatca 12142060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 76
Target Start/End: Complemental strand, 43079584 - 43079517
Alignment:
Q  8 atgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctct 76  Q
    ||||||||||||||||   ||||||||| | ||||| ||| ||||||||| ||||||||||||||||||    
T  43079584 atgaaaagagagaaaagaaaggttgtcaaataagtt-ttaccaaatggttgttcaaatatcattgctct 43079517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 44495122 - 44495170
Alignment:
Q  29 gttgtcataaaagttgttagcaaatggttattcaaatatcattgctcta 77  Q
    ||||||||||||||||| | ||||||| ||||||||||||||| |||||    
T  44495122 gttgtcataaaagttgtcatcaaatggatattcaaatatcatttctcta 44495170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 79
Target Start/End: Complemental strand, 6655576 - 6655502
Alignment:
Q  4 accaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctctatt 79  Q
    ||||||||||||||| |||||| || |||||| |||  |||| | ||||||||| || ||||||||||||||||||    
T  6655576 accaatgaaaagagataaaaagaagattgtcaaaaagattgt-accaaatggttgtttaaatatcattgctctatt 6655502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 25940629 - 25940555
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctct 76  Q
    ||||||||||||||||||||||| | ||||||||| || || |  || ||||| ||| ||||||||||||||||||    
T  25940629 ttgaccaatgaaaagagagaaaatgaaggttgtca-aatagattgtaccaaatagttgttcaaatatcattgctct 25940555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 44187800 - 44187875
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctct 76  Q
    |||||||||||||| | |||| ||  | |||||||| ||||||||||| |||| ||| ||||||||| ||||||||    
T  44187800 ttgaccaatgaaaaaaaagaacaataaagttgtcatgaaagttgttagtaaatagttgttcaaatattattgctct 44187875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 76
Target Start/End: Complemental strand, 25332425 - 25332387
Alignment:
Q  38 aaagttgttagcaaatggttattcaaatatcattgctct 76  Q
    |||||||||||||||||||| ||||||||| ||||||||    
T  25332425 aaagttgttagcaaatggttgttcaaatattattgctct 25332387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 8792559 - 8792488
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctct 76  Q
    ||||| |||||||||||||||||| |   |||||| ||||||||| | ||||||||| ||||||||||||| ||||    
T  8792559 ttgactaatgaaaagagagaaaaaag---ttgtcacaaaagttgt-atcaaatggttgttcaaatatcattactct 8792488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 37856143 - 37856098
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgtt 46  Q
    |||||||||||||||||||||||| ||| || ||| ||||||||||    
T  37856143 ttgaccaatgaaaagagagaaaaaagagattatcacaaaagttgtt 37856098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 5978688 - 5978755
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatca 69  Q
    |||||||||||||||||||||||  || ||||||| || ||||| || || |||||| |||||||||||    
T  5978688 ttgaccaatgaaaagagagaaaatagaagttgtcacaagagttg-tatcatatggttgttcaaatatca 5978755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 26123488 - 26123532
Alignment:
Q  4 accaatgaaaagagagaaaaaggaggttgtcataaaagttgttag 48  Q
    |||||| |||| ||||||||| ||||||||| |||||||||||||    
T  26123488 accaataaaaaaagagaaaaatgaggttgtcgtaaaagttgttag 26123532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 29034194 - 29034238
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgt 45  Q
    ||||||||||||||||||||||||| || |||||| ||| |||||    
T  29034194 ttgaccaatgaaaagagagaaaaagaagattgtcaaaaaggttgt 29034238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 35072204 - 35072133
Alignment:
Q  4 accaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctct 76  Q
    |||||||| ||||||||||| | || |||||| ||| ||||| | ||||| ||| ||||||||||||||||||    
T  35072204 accaatgagaagagagaaaatgaagattgtcaaaaaggttgt-accaaatagttgttcaaatatcattgctct 35072133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 43107721 - 43107792
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgc 73  Q
    |||||||||||||||| |||||| | ||||||| | | | |||| || ||||||||| |||||||||||||||    
T  43107721 ttgaccaatgaaaagaaagaaaaggaaggttgttaaataggttg-taccaaatggttgttcaaatatcattgc 43107792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 2e-26; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 11742946 - 11742863
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctctattgaaaaa 85  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||| |||||| ||||||||||||||||| |||||||||    
T  11742946 ttgaccaatgagaagagagaaaaaggaggttgtcatagaagttgttagcacatggttcttcaaatatcattgctc-attgaaaaa 11742863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 12044439 - 12044513
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctc 75  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  12044439 ttgaccaatgagaaaagagaaaaaggaggttgtcataaaagttgttagcacatggttgttcaaatatcattgctc 12044513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 23653855 - 23653780
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctct 76  Q
    |||||| |||| |||||||||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  23653855 ttgacctatgagaagagagaaaaatgaggttgtcataaaagttgttagcaaatggttgttcaaatattattgctct 23653780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 34490456 - 34490526
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcatt 71  Q
    |||||||||||||||||||||||||||| |||||||  ||||||||||||||||||| || ||||||||||    
T  34490456 ttgaccaatgaaaagagagaaaaaggagattgtcattgaagttgttagcaaatggttgttaaaatatcatt 34490526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 13 - 77
Target Start/End: Original strand, 20712187 - 20712251
Alignment:
Q  13 aagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctcta 77  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||||| ||||||    
T  20712187 aagagagaaaaaggaggttgtcatagaagttgttaacaaatggttgttcaaatatcatagctcta 20712251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 16743228 - 16743153
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctct 76  Q
    ||||||||||| |||||||||||| |||||||||||  ||||||||||||||| ||| || |||||||||||||||    
T  16743228 ttgaccaatgagaagagagaaaaatgaggttgtcattgaagttgttagcaaattgttgttaaaatatcattgctct 16743153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 32644724 - 32644791
Alignment:
Q  4 accaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcatt 71  Q
    |||||||| |||||||||||| |||||||||||| |||||||||||| |||||| |||||||||||||    
T  32644724 accaatgagaagagagaaaaatgaggttgtcatagaagttgttagcacatggttgttcaaatatcatt 32644791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 9188908 - 9188834
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctc 75  Q
    ||||||||| | |||||||||||| ||| || ||||||||||||||||||||||||| || ||||||||||||||    
T  9188908 ttgaccaataagaagagagaaaaatgagattatcataaaagttgttagcaaatggttgtttaaatatcattgctc 9188834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 1897795 - 1897840
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgtt 46  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||    
T  1897795 ttgaccaatgaaaagagagaaaaaagaggttgtcacaaaagttgtt 1897840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 18272465 - 18272525
Alignment:
Q  15 gagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctc 75  Q
    |||||||||| ||| ||||||||||| ||||||||||||| || |||||||| ||||||||    
T  18272465 gagagaaaaatgagattgtcataaaaattgttagcaaatgattgttcaaataacattgctc 18272525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 2582771 - 2582816
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgtt 46  Q
    |||| ||||||||||||||||||| |||||||||| ||||||||||    
T  2582771 ttgatcaatgaaaagagagaaaaaagaggttgtcacaaaagttgtt 2582816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 32729998 - 32730082
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctctattgaaaaat 86  Q
    |||| |||||||||||||||||||| | ||||||| | | |||| || ||||||||| |||| ||||||||||||| || ||||||    
T  32729998 ttgatcaatgaaaagagagaaaaagaatgttgtcaaataggttg-taccaaatggttgttcatatatcattgctcttttaaaaaat 32730082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 185
Target Start/End: Original strand, 31490777 - 31490832
Alignment:
Q  130 ttgttgaattcaatttaaacttaccatttttggtttccttgactagtgtcctaaag 185  Q
    ||||||||||||||  |||||||| |||||| |||||||| ||||||||| |||||    
T  31490777 ttgttgaattcaatacaaacttactatttttagtttccttaactagtgtcttaaag 31490832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 27334973 - 27335043
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcatt 71  Q
    ||||||||| ||||||||||||||  |||||||||| |||||||| |  |||||| | | |||||||||||    
T  27334973 ttgaccaataaaaagagagaaaaacaaggttgtcattaaagttgtcatgaaatggatgtacaaatatcatt 27335043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 27395713 - 27395783
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcatt 71  Q
    ||||||||| ||||||||||||||  |||||||||| |||||||| |  |||||| | | |||||||||||    
T  27395713 ttgaccaataaaaagagagaaaaacaaggttgtcattaaagttgtcatgaaatggatgtacaaatatcatt 27395783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 76
Target Start/End: Complemental strand, 6110470 - 6110429
Alignment:
Q  35 ataaaagttgttagcaaatggttattcaaatatcattgctct 76  Q
    |||||| |||||||||||| ||| ||||||||||||||||||    
T  6110470 ataaaaattgttagcaaatagttgttcaaatatcattgctct 6110429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 8173273 - 8173201
Alignment:
Q  2 tgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctc 75  Q
    ||||||||||||||||||||||   ||||||||| | | ||| | | ||||||||| |||||||||||||||||    
T  8173273 tgaccaatgaaaagagagaaaagaaaggttgtcaaataggttat-accaaatggttgttcaaatatcattgctc 8173201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 195
Target Start/End: Original strand, 12226418 - 12226483
Alignment:
Q  130 ttgttgaattcaatttaaacttaccatttttggtttccttgactagtgtcctaaaggcaccggtta 195  Q
    |||||||||||||| ||||  ||| ||||||||||||||| || | |||||| | |||||||||||    
T  12226418 ttgttgaattcaatgtaaatatactatttttggtttccttaaccattgtcctgagggcaccggtta 12226483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 20006734 - 20006674
Alignment:
Q  11 aaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcatt 71  Q
    ||||||||||||||| ||||||||| ||||||| | | ||||| || || |||||||||||    
T  20006734 aaaagagagaaaaagaaggttgtcacaaaagttatcaccaaatagtgatacaaatatcatt 20006674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 206
Target Start/End: Complemental strand, 26539134 - 26539058
Alignment:
Q  130 ttgttgaattcaatttaaacttaccatttttggtttccttgactagtgtcctaaaggcaccggttatcataacccta 206  Q
    ||||||||||||||  |||||||| |||||| |||||||| ||||||| ||| | | |||  |||| ||||||||||    
T  26539134 ttgttgaattcaatgcaaacttactatttttagtttccttaactagtgcccttaggacactagttaacataacccta 26539058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 2e-24; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 41460228 - 41460301
Alignment:
Q  4 accaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctcta 77  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||| |||||||||    
T  41460228 accaatgaaaagagagaaaaatgaggttgtcatgaaagttgttagcaaatggttgttcaaatattattgctcta 41460301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 3960131 - 3960057
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctc 75  Q
    |||| ||||||||||||| ||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  3960131 ttgatcaatgaaaagagaaaaaaatgaggttgtcatgaaagttgttagcaaatggttgttcaaatatcattgctc 3960057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 23991340 - 23991410
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcatt 71  Q
    |||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||| |||||||||||||    
T  23991340 ttgaccaatgaaaagagagaaaaatgaggttctcaaaaaagttgttagcaaatggttgttcaaatatcatt 23991410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 17063977 - 17064049
Alignment:
Q  4 accaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctct 76  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||||||| || ||||| ||||||||||||    
T  17063977 accaatgaaaagagagagaaatgaggttgtcataaaagttgttagcaaatgattgttcaagtatcattgctct 17064049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 41210476 - 41210412
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaat 65  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  41210476 ttgaccaataagaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttgttcaaat 41210412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 29803332 - 29803406
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctc 75  Q
    ||||||||| | |||||||||||||||||||||||| ||||||||||||||||  || |||||||||||||||||    
T  29803332 ttgaccaataataagagagaaaaaggaggttgtcatcaaagttgttagcaaataattgttcaaatatcattgctc 29803406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 76 - 213
Target Start/End: Original strand, 41871909 - 41872044
Alignment:
Q  76 tattgaaaaatggtgaaaattaaagtgatagatttgacttttga---gttnnnnnnnttgttgaattcaatttaaacttaccatttttggtttccttgac 172  Q
    |||| ||||||||||||||||||||||||| |||||||||||||   |||       |||||     |||| |||||||| |||||||| ||| ||| ||    
T  41871909 tattaaaaaatggtgaaaattaaagtgatacatttgacttttgaaaagttaaaaaaattgtt-----caatgtaaacttatcatttttgattttcttaac 41872003  T
Q  173 tagtgtcctaaaggcaccggttatcataaccctatatttta 213  Q
    ||||||||||||| ||||||||| |||||||||||||||||    
T  41872004 tagtgtcctaaagacaccggttaacataaccctatatttta 41872044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 11880949 - 11880875
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctc 75  Q
    ||||||||||| ||||||||||||| ||||||||||  |||||||||||||||| || || ||||||||||||||    
T  11880949 ttgaccaatgagaagagagaaaaagaaggttgtcattgaagttgttagcaaatgattgttaaaatatcattgctc 11880875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 13 - 77
Target Start/End: Complemental strand, 12827916 - 12827852
Alignment:
Q  13 aagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctcta 77  Q
    |||||||| |||| ||||||||||||||||  |||| ||||||||||||||||||||||||||||    
T  12827916 aagagagagaaagaaggttgtcataaaagtcattagtaaatggttattcaaatatcattgctcta 12827852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 39595383 - 39595452
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcatt 71  Q
    |||||||||||||||||||||||| || ||||||| |||||||| || ||||||||| |||||||||||||    
T  39595383 ttgaccaatgaaaagagagaaaaaagaagttgtcacaaaagttg-tatcaaatggttgttcaaatatcatt 39595452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 9636120 - 9636036
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctctattgaaaaat 86  Q
    ||||||||||||||||||||||| | ||||||||| | | |||| || ||||||||| ||||||||||||||||| || |||||||    
T  9636120 ttgaccaatgaaaagagagaaaatgaaggttgtcaaataggttg-taccaaatggttgttcaaatatcattgctcaatcgaaaaat 9636036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 28811537 - 28811604
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatca 69  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||  ||||| | |||||||||||||    
T  28811537 ttgaccaatgaaaagagagaaaaaagaggttgtcacaaaagttgtt-tcaaatagatattcaaatatca 28811604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 24792561 - 24792635
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctct 76  Q
    ||||||||||||||||||||||| | ||||||||| | | |||| || ||||||||| ||||||||||||||||||    
T  24792561 ttgaccaatgaaaagagagaaaatgaaggttgtcaaataggttg-taccaaatggttgttcaaatatcattgctct 24792635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 34428271 - 34428342
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaag-gaggttgtcataaaagttgttagcaaatggttattcaaatatcatt 71  Q
    ||||||||||| |||||| |||||  ||| || ||||| |||||||||||||||||||||||||||||||||    
T  34428271 ttgaccaatgataagagaaaaaaaaagagattatcatagaagttgttagcaaatggttattcaaatatcatt 34428342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 7144684 - 7144757
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctc 75  Q
    ||||||||| ||||||||||||||| ||||||||| ||| |||| || |||||||||  ||||||||||||||||    
T  7144684 ttgaccaataaaaagagagaaaaagaaggttgtcaaaaaggttg-tatcaaatggttgctcaaatatcattgctc 7144757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 71
Target Start/End: Original strand, 7766094 - 7766152
Alignment:
Q  13 aagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcatt 71  Q
    |||||||||||  ||||||||||| ||||||||||||||||| || |||||||||||||    
T  7766094 aagagagaaaagtgaggttgtcatgaaagttgttagcaaatgattgttcaaatatcatt 7766152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 125201 - 125268
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatca 69  Q
    |||||||||||||||||||||||| || ||||||  |||||||| || ||||||||| |||||||||||    
T  125201 ttgaccaatgaaaagagagaaaaaagaagttgtcgcaaaagttg-tatcaaatggttgttcaaatatca 125268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 91324 - 91398
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctct 76  Q
    |||||||||||||||||||||||   ||||||||| | | ||||| | ||||||||| ||||||||||||||||||    
T  91324 ttgaccaatgaaaagagagaaaagaaaggttgtcaaataggttgt-atcaaatggttgttcaaatatcattgctct 91398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 26626781 - 26626707
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctct 76  Q
    ||||||||| | || |||||||||  |||||||||| |||||||| | ||||||||| ||||||||||||||||||    
T  26626781 ttgaccaataacaaaagagaaaaaaaaggttgtcatgaaagttgtaa-caaatggttgttcaaatatcattgctct 26626707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 582831 - 582758
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctc 75  Q
    |||||||||||||||||||| |||| ||||||||| |||  ||| || |||||| || |||||||||||||||||    
T  582831 ttgaccaatgaaaagagagagaaagaaggttgtcaaaaatcttg-taccaaatgattgttcaaatatcattgctc 582758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 78
Target Start/End: Original strand, 15639497 - 15639570
Alignment:
Q  4 accaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctctat 78  Q
    |||||||| ||| ||||| ||| ||||||||| ||| ||||| | ||||||||| ||||||||||||||||||||    
T  15639497 accaatgagaagggagaagaagaaggttgtcaaaaaggttgt-accaaatggttgttcaaatatcattgctctat 15639570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 5698290 - 5698215
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctcta 77  Q
    ||||||||| | || |||||||||| |||||||||| |||||||| | |||||| || ||| |||||||||||||||    
T  5698290 ttgaccaataacaaaagagaaaaagaaggttgtcatgaaagttgt-accaaatgattgttctaatatcattgctcta 5698215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 77
Target Start/End: Original strand, 5996779 - 5996851
Alignment:
Q  6 caatgaaaagagaga-aaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctcta 77  Q
    |||||| |||||||| ||||||| ||||||||  ||||||||||||||| ||| || |||||||| |||||||    
T  5996779 caatgagaagagagagaaaaggaagttgtcattgaagttgttagcaaatagttgttaaaatatcactgctcta 5996851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 12779568 - 12779501
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatca 69  Q
    |||||||||||||||| ||| ||| || ||||||| |||| ||||| | ||||||||||||||||||||    
T  12779568 ttgaccaatgaaaagaaagagaaaagaagttgtcacaaaaattgtt-gaaaatggttattcaaatatca 12779501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 33567201 - 33567134
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatca 69  Q
    |||||||||||||||||||||||| ||  |||||| |||||||| || ||||||||| |||| ||||||    
T  33567201 ttgaccaatgaaaagagagaaaaaagaaattgtcacaaaagttg-tatcaaatggttgttcatatatca 33567134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 34381121 - 34381188
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatca 69  Q
    |||||||||||||||||||||||| || ||||||| |||| ||  || ||||||||| |||||||||||    
T  34381121 ttgaccaatgaaaagagagaaaaacgaagttgtcacaaaaatt-atatcaaatggttgttcaaatatca 34381188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 11464085 - 11464010
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctct 76  Q
    ||||||||| ||||||||||||||  |||||||||  ||||||||||   ||||| | | ||||||||||||||||    
T  11464085 ttgaccaataaaaagagagaaaaacaaggttgtcactaaagttgttatggaatggatgtacaaatatcattgctct 11464010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 71
Target Start/End: Complemental strand, 19824177 - 19824126
Alignment:
Q  20 aaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcatt 71  Q
    ||||| ||| |||||||| ||||||||| ||||||||| |||||||||||||    
T  19824177 aaaaatgagattgtcatagaagttgttaacaaatggttgttcaaatatcatt 19824126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 26627454 - 26627512
Alignment:
Q  16 agagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctc 75  Q
    |||||||||| |||||||||| |||||||| | ||||| ||| |||||||||||||||||    
T  26627454 agagaaaaagaaggttgtcatgaaagttgt-accaaatagttgttcaaatatcattgctc 26627512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 2117599 - 2117535
Alignment:
Q  4 accaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatca 69  Q
    ||||||||||| ||||||||| || ||||||| |||||||| || ||||| ||| |||||||||||    
T  2117599 accaatgaaaaaagagaaaaaagaagttgtcacaaaagttg-tatcaaatagttgttcaaatatca 2117535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 11306808 - 11306872
Alignment:
Q  4 accaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatca 69  Q
    ||||||||||||||||||||| || ||||||  |||||||| || ||||| ||| |||||||||||    
T  11306808 accaatgaaaagagagaaaaaagaagttgtctcaaaagttg-tatcaaatagttgttcaaatatca 11306872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 24431577 - 24431513
Alignment:
Q  4 accaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatca 69  Q
    ||||||||||||||||||||| || ||||||| || ||||| |  ||||||||| |||||||||||    
T  24431577 accaatgaaaagagagaaaaatgaagttgtcacaatagttg-tctcaaatggttgttcaaatatca 24431513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 36581429 - 36581353
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctctat 78  Q
    ||||||||| |||||||| |||| | ||||||||| | | ||||| |  |||||||| ||||||||||||||||||||    
T  36581429 ttgaccaataaaaagagaaaaaatgaaggttgtcaaataggttgt-acaaaatggttgttcaaatatcattgctctat 36581353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 12718342 - 12718275
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatca 69  Q
    |||||||||||||||| ||| ||| || ||||||| |||| ||||| | |||||||| |||||||||||    
T  12718342 ttgaccaatgaaaagaaagagaaaagaagttgtcacaaaaattgtt-gaaaatggttgttcaaatatca 12718275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 19376094 - 19376050
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgt 45  Q
    |||||||||||||||||||||||| || ||||||| | |||||||    
T  19376094 ttgaccaatgaaaagagagaaaaaagaagttgtcacataagttgt 19376050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 20719977 - 20719933
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgt 45  Q
    |||||||||||||||||||| ||| || ||||||| |||||||||    
T  20719977 ttgaccaatgaaaagagagagaaaagaagttgtcacaaaagttgt 20719933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 38387848 - 38387895
Alignment:
Q  30 ttgtcataaaagttgttagcaaatggttattcaaatatcattgctctat 78  Q
    |||||||||| ||||| | ||||||||| ||||||||||||||||||||    
T  38387848 ttgtcataaaggttgt-accaaatggttgttcaaatatcattgctctat 38387895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 6e-24; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 9000976 - 9000900
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctcta 77  Q
    ||||||||||||||||||| |||| ||||||| ||| |||||||||||||||||||| |||||||||||||||||||    
T  9000976 ttgaccaatgaaaagagagtaaaatgaggttgacattaaagttgttagcaaatggttgttcaaatatcattgctcta 9000900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 38174211 - 38174136
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctct 76  Q
    |||||||||||  ||||||| |||||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  38174211 ttgaccaatgaggagagagagaaaggaggttgtcatagaagttgttagcaaatggttgttcaaatatcattgctct 38174136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 36524714 - 36524640
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctc 75  Q
    |||| |||||| |||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  36524714 ttgatcaatgagaagagagaaaaatgaggctgtcataaaagttgttagcaaatggttgttcaaatatcattgctc 36524640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 9895118 - 9895185
Alignment:
Q  4 accaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcatt 71  Q
    |||||||||||||||||||| ||||||| |||| |||||||||||||||||||| |||||||||||||    
T  9895118 accaatgaaaagagagaaaagggaggttatcatgaaagttgttagcaaatggttgttcaaatatcatt 9895185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 30578363 - 30578437
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctc 75  Q
    ||||||||||| |||||||||||||||||||||||| |||||||| |||||||  || |||||||||||||||||    
T  30578363 ttgaccaatgataagagagaaaaaggaggttgtcatcaaagttgtcagcaaataattgttcaaatatcattgctc 30578437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 6849223 - 6849148
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctct 76  Q
    ||||||||| |||| |||||||||| | |||||||||||||||||||| |||||| | ||||||||||||||||||    
T  6849223 ttgaccaataaaaaaagagaaaaagaaagttgtcataaaagttgttagaaaatggctgttcaaatatcattgctct 6849148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 14548784 - 14548712
Alignment:
Q  4 accaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctct 76  Q
    |||||||| |||||||||||| |||||||||||  ||||||||||||||| ||| || |||||||||||||||    
T  14548784 accaatgagaagagagaaaaatgaggttgtcattgaagttgttagcaaatagttgttaaaatatcattgctct 14548712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 29108094 - 29108168
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctc 75  Q
    ||||||||| |||| ||| |||||| |||||||||| ||||||||||| |||||||| || ||||||||||||||    
T  29108094 ttgaccaataaaaaaagaaaaaaagaaggttgtcattaaagttgttagtaaatggttgttaaaatatcattgctc 29108168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 38844753 - 38844679
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctc 75  Q
    ||||||||| | |||||||| ||| ||||||||||||||| |||||| ||||||||| |||||||||||| ||||    
T  38844753 ttgaccaataagaagagagagaaaagaggttgtcataaaaattgttaacaaatggttgttcaaatatcatggctc 38844679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 24503026 - 24503090
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaata 66  Q
    |||||||||||||||||||||||| || |||||||||||||||| |  ||||||||||||||||||    
T  24503026 ttgaccaatgaaaagagagaaaaatgaagttgtcataaaagttg-tctcaaatggttattcaaata 24503090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 28418425 - 28418366
Alignment:
Q  16 agagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctc 75  Q
    ||||| |||||||||||||||||||||||| ||| |||| || |||||||||||||||||    
T  28418425 agagagaaaggaggttgtcataaaagttgtaagcgaatgattgttcaaatatcattgctc 28418366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 1796592 - 1796665
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctc 75  Q
    ||||||||||||||||||||||| | ||||||||| | | |||| || ||||||||| |||||||||||||||||    
T  1796592 ttgaccaatgaaaagagagaaaaggaaggttgtcaaataggttg-taacaaatggttgttcaaatatcattgctc 1796665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 71
Target Start/End: Original strand, 20284828 - 20284886
Alignment:
Q  13 aagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcatt 71  Q
    ||||||||||||| ||||||||| ||||||||| | ||||||||| |||||||||||||    
T  20284828 aagagagaaaaagaaggttgtcacaaaagttgtcatcaaatggttgttcaaatatcatt 20284886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 71
Target Start/End: Original strand, 21071457 - 21071515
Alignment:
Q  13 aagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcatt 71  Q
    ||||||||||||| ||||||||| ||||||||| | ||||||||| |||||||||||||    
T  21071457 aagagagaaaaagaaggttgtcacaaaagttgtcatcaaatggttgttcaaatatcatt 21071515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 6005053 - 6005128
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctcta 77  Q
    ||||||||||||||||||||||| | | ||||||| | |||||| || ||||||||| |||||| ||||||||||||    
T  6005053 ttgaccaatgaaaagagagaaaaggaaagttgtcaaataagttg-taccaaatggttgttcaaacatcattgctcta 6005128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 23258141 - 23258208
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatca 69  Q
    |||||||||||||||||||||||| || ||||||| |||| |||||  ||||||||| |||||||||||    
T  23258141 ttgaccaatgaaaagagagaaaaaagaagttgtcacaaaaattgtt-tcaaatggttgttcaaatatca 23258208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 40413325 - 40413258
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatca 69  Q
    ||||| |||||||||||||||||| || ||| |||||||||||| || ||||||||| |||||||||||    
T  40413325 ttgactaatgaaaagagagaaaaaagaagttatcataaaagttg-tatcaaatggttgttcaaatatca 40413258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 12045615 - 12045533
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctctattgaaaa 84  Q
    ||||||||||| |||||| || ||| ||||||||| ||| ||| | | ||||||||| |||||||||||||||||| |||||||    
T  12045615 ttgaccaatgagaagagacaagaagaaggttgtcaaaaaggttat-accaaatggttgttcaaatatcattgctcttttgaaaa 12045533  T

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Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 75
Target Start/End: Complemental strand, 37392087 - 37392016
Alignment:
Q  4 accaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctc 75  Q
    |||||| ||||||||| ||||  || |||||| |||| |||||| ||||||||| |||||||||||||||||    
T  37392087 accaataaaaagagaggaaaaaaagtttgtcaaaaaaattgttaacaaatggttgttcaaatatcattgctc 37392016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 40671072 - 40671131
Alignment:
Q  13 aagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattg 72  Q
    |||||| ||||| ||| |||||||||||||||||||||||| ||| ||||||||| ||||    
T  40671072 aagagaaaaaaaagagattgtcataaaagttgttagcaaatagttgttcaaatattattg 40671131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 3206425 - 3206355
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcatt 71  Q
    ||||||||| ||||||||||||||| | ||||||| |||| || | | ||||||||| |||||||||||||    
T  3206425 ttgaccaattaaaagagagaaaaagtatgttgtcacaaaaattatcatcaaatggttgttcaaatatcatt 3206355  T

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Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 10344437 - 10344489
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaat 53  Q
    ||||||||| |||||| |||||||  ||||||||||||||||||||| |||||    
T  10344437 ttgaccaataaaaagaaagaaaaacaaggttgtcataaaagttgttatcaaat 10344489  T

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Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 22767239 - 22767283
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgt 45  Q
    |||||||||||||||||||||||| || ||||||| |||||||||    
T  22767239 ttgaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgt 22767283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 28927790 - 28927857
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatca 69  Q
    |||||||||||||||||||| ||| || ||||||| |||| || ||| ||||||||| |||||||||||    
T  28927790 ttgaccaatgaaaagagagagaaaagaagttgtcacaaaaatt-ttatcaaatggttgttcaaatatca 28927857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 7678844 - 7678910
Alignment:
Q  4 accaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcatt 71  Q
    ||||||||||||||||||||| || ||||| | |||||||| || ||||| ||| |||||||||||||    
T  7678844 accaatgaaaagagagaaaaaagaagttgttacaaaagttg-tatcaaatagttgttcaaatatcatt 7678910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 76
Target Start/End: Complemental strand, 41955975 - 41955928
Alignment:
Q  29 gttgtcataaaagttgttagcaaatggttattcaaatatcattgctct 76  Q
    |||||||||||||||||||  |||||||||| ||||||||||| ||||    
T  41955975 gttgtcataaaagttgttaaaaaatggttatacaaatatcatttctct 41955928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 42443215 - 42443289
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctct 76  Q
    ||||||||||| ||| ||||| ||| ||||||||| |||| ||| || ||||| ||| ||||||||||||||||||    
T  42443215 ttgaccaatgagaagggagaagaagaaggttgtcaaaaaatttg-taccaaatagttgttcaaatatcattgctct 42443289  T

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Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 43605631 - 43605556
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctct 76  Q
    ||||||||| | ||||||||||| | ||||||||| ||||||||| |  ||| |||| ||||||||||||| ||||    
T  43605631 ttgaccaataagaagagagaaaaggtaggttgtcacaaaagttgtcactaaaaggttgttcaaatatcattactct 43605556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 20995020 - 20994950
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcatt 71  Q
    ||||||||| | ||||||||||| | ||||||||| ||||||||| | || | |||| |||||||||||||    
T  20995020 ttgaccaataagaagagagaaaaggtaggttgtcacaaaagttgtcaccagaaggttgttcaaatatcatt 20994950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 36740421 - 36740494
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctc 75  Q
    |||| |||||||||||||||||| | ||||||||| || || |  || ||||||||| |||||||||||||||||    
T  36740421 ttgatcaatgaaaagagagaaaatgaaggttgtca-aatagattgtatcaaatggttgttcaaatatcattgctc 36740494  T

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Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 37524390 - 37524356
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  37524390 ttgaccaatgaaaagagagaaaaaagaggttgtca 37524356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 426210 - 426255
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgtt 46  Q
    |||||||||||||||||||||||| || ||||||| | ||||||||    
T  426210 ttgaccaatgaaaagagagaaaaaagaagttgtcacataagttgtt 426255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 5359447 - 5359492
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgtt 46  Q
    ||||||||| |||||||||||||| ||| |||||| ||||||||||    
T  5359447 ttgaccaataaaaagagagaaaaaagagattgtcacaaaagttgtt 5359492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 78
Target Start/End: Original strand, 9048349 - 9048390
Alignment:
Q  37 aaaagttgttagcaaatggttattcaaatatcattgctctat 78  Q
    |||||||||||| |||||||||| ||||||||||| ||||||    
T  9048349 aaaagttgttagaaaatggttatacaaatatcatttctctat 9048390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 75
Target Start/End: Complemental strand, 33854784 - 33854726
Alignment:
Q  13 aagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctc 75  Q
    ||||||||||||| |||||||||| ||||||||    | |||||| |||||||||||||||||    
T  33854784 aagagagaaaaagaaggttgtcatgaaagttgt----atatggttgttcaaatatcattgctc 33854726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 896016 - 896060
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgt 45  Q
    |||||||||||||||||||||||| || ||||| | |||||||||    
T  896016 ttgaccaatgaaaagagagaaaaaagaagttgttaaaaaagttgt 896060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 38128488 - 38128421
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatca 69  Q
    ||||||||||||||| |||||||| || ||||||| |||| |||||   |||||||| |||||||||||    
T  38128488 ttgaccaatgaaaagtgagaaaaaagaagttgtcacaaaaattgtt-taaaatggttgttcaaatatca 38128421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 43587753 - 43587825
Alignment:
Q  4 accaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctct 76  Q
    |||||| ||||||||||||||  | |||||||  |||||||| |  |||||| ||| ||||||||||||||||    
T  43587753 accaatcaaaagagagaaaaacaaagttgtcaccaaagttgtcattaaatggatatacaaatatcattgctct 43587825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 6 - 75
Target Start/End: Complemental strand, 18248 - 18179
Alignment:
Q  6 caatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctc 75  Q
    |||||| |||||||| || ||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  18248 caatgagaagagagagaagggaggttgtcataaaagttgtaagcaaatggttgttcaaatatcattgctc 18179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 5341 - 5413
Alignment:
Q  4 accaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctct 76  Q
    |||||||| ||||||||||| ||||| |||||| |||||||||||||||||||| ||||||||||||| ||||    
T  5341 accaatgagaagagagaaaagggaggctgtcatgaaagttgttagcaaatggttgttcaaatatcattactct 5413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 224115 - 224183
Alignment:
Q  7 aatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctc 75  Q
    |||||||| ||||||||| ||  ||||||| |||||||||||||||| ||| |||||||||||||||||    
T  224115 aatgaaaatagagaaaaaagaaattgtcatcaaagttgttagcaaattgttgttcaaatatcattgctc 224183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 34944 - 35018
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctct 76  Q
    ||||||||||||||||||||||| | ||||||||| | | |||| || ||||||||| ||||||||||||||||||    
T  34944 ttgaccaatgaaaagagagaaaatgaaggttgtcaaataggttg-taccaaatggttgttcaaatatcattgctct 35018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 16556 - 16483
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctc 75  Q
    ||||||||||||| ||||||||||| || |||||| |||||||| || ||||||||| || ||||||||||||||    
T  16556 ttgaccaatgaaacgagagaaaaagaagattgtcaaaaaagttg-taccaaatggttgttgaaatatcattgctc 16483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 56288 - 56361
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctc 75  Q
    ||||||||||||| ||||||||||| || |||||| |||||||| || ||||||||| || ||||||||||||||    
T  56288 ttgaccaatgaaacgagagaaaaagaagattgtcaaaaaagttg-taccaaatggttgttgaaatatcattgctc 56361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 11301 - 11346
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgtt 46  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||    
T  11301 ttgaccaatgaaaagagagaaaaaagaggttgtcacaaaagttgtt 11346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 204409 - 204325
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatcattgctctattgaaaaa 85  Q
    ||||||||| | ||||||||||||| || |||||| ||||||||| | |||| |||| || |||||||||| ||| | |||||||    
T  204409 ttgaccaataagaagagagaaaaagtagattgtcacaaaagttgtcaccaaaaggttgtttaaatatcattactcaagtgaaaaa 204325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 46
Target Start/End: Original strand, 38991 - 39033
Alignment:
Q  4 accaatgaaaagagagaaaaaggaggttgtcataaaagttgtt 46  Q
    ||||||||||||||||||||| ||| |||||| ||||||||||    
T  38991 accaatgaaaagagagaaaaaagagattgtcacaaaagttgtt 39033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 18116 - 18179
Alignment:
Q  4 accaatgaaaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttattcaaatatca 69  Q
    |||||||||||||||||||||  | |||||||||||||||| || ||||| ||| |||||||||||    
T  18116 accaatgaaaagagagaaaaa-aaagttgtcataaaagttg-tatcaaatagttgttcaaatatca 18179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 113734 - 113779
Alignment:
Q  1 ttgaccaatgaaaagagagaaaaaggaggttgtcataaaagttgtt 46  Q
    |||||||||||||||||||||||  |||||||||| |||| |||||    
T  113734 ttgaccaatgaaaagagagaaaagagaggttgtcacaaaaattgtt 113779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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