View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2585_low_23 (Length: 410)
Name: NF2585_low_23
Description: NF2585
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2585_low_23 |
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Alignment Details
Target: chr4 (Bit Score: 143; Significance: 5e-75; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 19 - 193
Target Start/End: Original strand, 53769300 - 53769481
Alignment:
| Q |
19 |
gaatggcatgagagtgagtgagagtttgaggttgaaaaataatgaagaagaagagaagtgtgcataattagttaccagaga------tggagatggcagc |
112 |
Q |
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| T |
53769300 |
gaatggcatgagagtgagtgagagtttgaggttgaaaaataatgaagaagaagagaagtgtgcatagttagttaccagagatggagatggagatggcggc |
53769399 |
T |
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| Q |
113 |
ggagagtgttgttaatgtaatggtcgtcactgccaaccatcttgcttctgaaatcatgtta-ctgcgcatcgatctatcgcc |
193 |
Q |
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| T |
53769400 |
ggagagtgttgttaatgtaatggtcgtcactgccaaccatcttgcttctgaaatcatgttacctgcgcatcgatctatcgcc |
53769481 |
T |
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