View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2585_low_34 (Length: 343)
Name: NF2585_low_34
Description: NF2585
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2585_low_34 |
 | |
|
| [»] scaffold0400 (2 HSPs) |
| | |
|
| [»] scaffold0365 (2 HSPs) |
| | |
|
| [»] scaffold0289 (2 HSPs) |
| | |
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Alignment Details
Target: scaffold0400 (Bit Score: 259; Significance: 1e-144; HSPs: 2)
Name: scaffold0400
Description:
Target: scaffold0400; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 35 - 329
Target Start/End: Complemental strand, 13836 - 13542
Alignment:
| Q |
35 |
atgaactacaaattattataacctttaattaatataaaagaaaagtaattgacctggagctgcatatccaaaggtgcctgcaaaagaagtcatgttggat |
134 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
13836 |
atgaactacaaattattataacctttaattaatataaaagaaaaggaattgacctggagctgcatatccaaaggtgcctgcaaaagaagtcatgttggat |
13737 |
T |
|
| Q |
135 |
gaattgggatttaggaacttggatgttccgaagtctgagacatgagctacgtattccaaatccaaaataacattcttgctggatatatctcgatgaacaa |
234 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13736 |
gaattgggatttaggaacttggatgttccgaagtctgagacatgagctacatattccaaatccaaaataacattcttgctggatatatctcgatgaacaa |
13637 |
T |
|
| Q |
235 |
taggaggtgaacaatcatgatgcagataacataaagcattagctatatctttaatgacattcaccctcctattccaatcaaattcaggagcttgt |
329 |
Q |
| |
|
||||||| |||||||||||||||||||| |||| |||||||||||||||||||||| |||||||||| |||||||||||||||||| ||||||| |
|
|
| T |
13636 |
taggaggggaacaatcatgatgcagatagaataaggcattagctatatctttaatgatattcaccctcttattccaatcaaattcagcagcttgt |
13542 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0400; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 71 - 312
Target Start/End: Complemental strand, 7500 - 7259
Alignment:
| Q |
71 |
aaagaaaagtaattgacctggagctgcatatccaaaggtgcctgcaaaagaagtcatgttggatgaattgggatttaggaacttggatgttccgaagtct |
170 |
Q |
| |
|
||||||||| |||| ||||||||| |||||||||||||| ||| ||||| | ||| ||||| |||| |||||| || ||||||| ||||||||||||| |
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|
| T |
7500 |
aaagaaaagaaattaacctggagcagcatatccaaaggttcctacaaaacaggtccaattggaagaatcgggattaagaaacttggctgttccgaagtct |
7401 |
T |
|
| Q |
171 |
gagacatgagctacgtattccaaatccaaaataacattcttgctggatatatctcgatgaacaataggaggtgaacaatcatgatgcagataacataaag |
270 |
Q |
| |
|
||||||||||| || |||||||||||||||| ||||||||||||||||||||| ||||||||||| | |||||| |||| ||||||| ||| ||||||| |
|
|
| T |
7400 |
gagacatgagccacatattccaaatccaaaacaacattcttgctggatatatcacgatgaacaattgaaggtgagcaattgtgatgcatatagcataaag |
7301 |
T |
|
| Q |
271 |
cattagctatatctttaatgacattcaccctcctattccaat |
312 |
Q |
| |
|
||||||||| | |||||||| |||| |||||||||||||||| |
|
|
| T |
7300 |
cattagctacacctttaatggcatttaccctcctattccaat |
7259 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0365 (Bit Score: 259; Significance: 1e-144; HSPs: 2)
Name: scaffold0365
Description:
Target: scaffold0365; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 35 - 329
Target Start/End: Complemental strand, 14479 - 14185
Alignment:
| Q |
35 |
atgaactacaaattattataacctttaattaatataaaagaaaagtaattgacctggagctgcatatccaaaggtgcctgcaaaagaagtcatgttggat |
134 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14479 |
atgaactacaaattattataacctttaattaatataaaagaaaaggaattgacctggagctgcatatccaaaggtgcctgcaaaagaagtcatgttggat |
14380 |
T |
|
| Q |
135 |
gaattgggatttaggaacttggatgttccgaagtctgagacatgagctacgtattccaaatccaaaataacattcttgctggatatatctcgatgaacaa |
234 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14379 |
gaattgggatttaggaacttggatgttccgaagtctgagacatgagctacatattccaaatccaaaataacattcttgctggatatatctcgatgaacaa |
14280 |
T |
|
| Q |
235 |
taggaggtgaacaatcatgatgcagataacataaagcattagctatatctttaatgacattcaccctcctattccaatcaaattcaggagcttgt |
329 |
Q |
| |
|
||||||| |||||||||||||||||||| |||| |||||||||||||||||||||| |||||||||| |||||||||||||||||| ||||||| |
|
|
| T |
14279 |
taggaggggaacaatcatgatgcagatagaataaggcattagctatatctttaatgatattcaccctcttattccaatcaaattcagcagcttgt |
14185 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0365; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 71 - 312
Target Start/End: Complemental strand, 8144 - 7903
Alignment:
| Q |
71 |
aaagaaaagtaattgacctggagctgcatatccaaaggtgcctgcaaaagaagtcatgttggatgaattgggatttaggaacttggatgttccgaagtct |
170 |
Q |
| |
|
||||||||| |||| ||||||||| |||||||||||||| ||| ||||| | ||| ||||| |||| |||||| || ||||||| ||||||||||||| |
|
|
| T |
8144 |
aaagaaaagaaattaacctggagcagcatatccaaaggttcctacaaaacaggtccaattggaagaatcgggattaagaaacttggctgttccgaagtct |
8045 |
T |
|
| Q |
171 |
gagacatgagctacgtattccaaatccaaaataacattcttgctggatatatctcgatgaacaataggaggtgaacaatcatgatgcagataacataaag |
270 |
Q |
| |
|
||||||||||| || |||||||||||||||| ||||||||||||||||||||| ||||||||||| | |||||| |||| ||||||| ||| ||||||| |
|
|
| T |
8044 |
gagacatgagccacatattccaaatccaaaacaacattcttgctggatatatcacgatgaacaattgaaggtgagcaattgtgatgcatatagcataaag |
7945 |
T |
|
| Q |
271 |
cattagctatatctttaatgacattcaccctcctattccaat |
312 |
Q |
| |
|
||||||||| | |||||||| |||| |||||||||||||||| |
|
|
| T |
7944 |
cattagctacacctttaatggcatttaccctcctattccaat |
7903 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 237; Significance: 1e-131; HSPs: 11)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 41 - 329
Target Start/End: Original strand, 14531816 - 14532103
Alignment:
| Q |
41 |
tacaaattattataacctttaattaatataaaagaaaagtaattgacctggagctgcatatccaaaggtgcctgcaaaagaagtcatgttggatgaattg |
140 |
Q |
| |
|
|||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| |
|
|
| T |
14531816 |
tacaaaatattataacctt-aattaatataaaagaaaaggaattgacctggagctgcatatccaaaggtgcctgcaaaagaagtcatattggatgagttg |
14531914 |
T |
|
| Q |
141 |
ggatttaggaacttggatgttccgaagtctgagacatgagctacgtattccaaatccaaaataacattcttgctggatatatctcgatgaacaataggag |
240 |
Q |
| |
|
||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14531915 |
ggattcagaaacttggatgttccgaagtctgagacatgagctacgtattccaaatccaaaataacattcttgctggatatatctcgatgaacaataggag |
14532014 |
T |
|
| Q |
241 |
gtgaacaatcatgatgcagataacataaagcattagctatatctttaatgacattcaccctcctattccaatcaaattcaggagcttgt |
329 |
Q |
| |
|
|||| || |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
14532015 |
gtgagcagtcatgatgtagatagcataaagcattagctatatctttaatgacattcaccctcctattccaatcaaattcagcagcttgt |
14532103 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 74 - 319
Target Start/End: Complemental strand, 15003116 - 15002871
Alignment:
| Q |
74 |
gaaaagtaattgacctggagctgcatatccaaaggtgcctgcaaaagaagtcatgttggatgaattgggatttaggaacttggatgttccgaagtctgag |
173 |
Q |
| |
|
|||||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||| |||||||| || |||||| |
|
|
| T |
15003116 |
gaaaaggaattgacctggagcagcatatccaaaggtgcctgcaaaagaagtcatattggacgaattgggatttagaaacttagatgttccaaaatctgag |
15003017 |
T |
|
| Q |
174 |
acatgagctacgtattccaaatccaaaataacattcttgctggatatatctcgatgaacaataggaggtgaacaatcatgatgcagataacataaagcat |
273 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| |
|
|
| T |
15003016 |
acatgagctacatattccaaatccaaaataacattcttgctggatatatctcgatgaacaataggaggggaacaatcatgatgcagatagcataaagcat |
15002917 |
T |
|
| Q |
274 |
tagctatatctttaatgacattcaccctcctattccaatcaaattc |
319 |
Q |
| |
|
|||||| ||||||||||| |||||||||| |||||||||||||||| |
|
|
| T |
15002916 |
tagctacatctttaatgatattcaccctcttattccaatcaaattc |
15002871 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 41 - 329
Target Start/End: Complemental strand, 15038058 - 15037773
Alignment:
| Q |
41 |
tacaaattattataacctttaattaatataaaagaaaagtaattgacctggagctgcatatccaaaggtgcctgcaaaagaagtcatgttggatgaattg |
140 |
Q |
| |
|
|||||| ||||||||| |||||||||||||||| || | |||||||||||||| |||||||||||||||||||||||||||| ||| |||||||| ||| |
|
|
| T |
15038058 |
tacaaaatattataac-tttaattaatataaaa--aagggaattgacctggagcagcatatccaaaggtgcctgcaaaagaagacatattggatgagttg |
15037962 |
T |
|
| Q |
141 |
ggatttaggaacttggatgttccgaagtctgagacatgagctacgtattccaaatccaaaataacattcttgctggatatatctcgatgaacaataggag |
240 |
Q |
| |
|
|||||||| ||||| |||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15037961 |
ggatttagaaacttagatgttccaaagtctgagacatgagctacatattccatatccaaaataacattcttgctggatatatctcgatgaacaataggag |
15037862 |
T |
|
| Q |
241 |
gtgaacaatcatgatgcagataacataaagcattagctatatctttaatgacattcaccctcctattccaatcaaattcaggagcttgt |
329 |
Q |
| |
|
| |||||||||||||||||||| |||||||||||||||||||| ||||||| |||||| ||| ||||||||||||||||| ||||||| |
|
|
| T |
15037861 |
gggaacaatcatgatgcagatagcataaagcattagctatatccttaatgatattcactctcttattccaatcaaattcaccagcttgt |
15037773 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 40 - 329
Target Start/End: Complemental strand, 15041629 - 15041341
Alignment:
| Q |
40 |
ctacaaattattataacctttaattaatataaaagaaaagtaattgacctggagctgcatatccaaaggtgc--ctgcaaaagaagtcatgttggatgaa |
137 |
Q |
| |
|
||||||| |||||||||||| ||||||||||||| || | |||| |||||| || |||||||||||||||| |||||||||||||||| ||||||||| |
|
|
| T |
15041629 |
ctacaaaatattataacctt-aattaatataaaa--aagggaattcacctggtgcagcatatccaaaggtgcgcctgcaaaagaagtcatattggatgaa |
15041533 |
T |
|
| Q |
138 |
ttgggatttaggaacttggatgttccgaagtctgagacatgagctacgtattccaaatccaaaataacattcttgctggatatatctcgatgaacaatag |
237 |
Q |
| |
|
|||||||||| ||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15041532 |
ttgggatttaaaaacttagatgttccaaagtctgagacatgagctacatattccaaatccaaaataacattcttgctggatatatctcgatgaacaatag |
15041433 |
T |
|
| Q |
238 |
gaggtgaacaatcatgatgcagataacataaagcattagctatatctttaatgacattcaccctcctattccaatcaaattcaggagcttgt |
329 |
Q |
| |
|
|||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |
|
|
| T |
15041432 |
gaggggaacaatcatgatgtagatagcataaagcattagctatatctttaatgacattcacccttctattccaatcaaattcactagcttgt |
15041341 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 84 - 329
Target Start/End: Complemental strand, 15018114 - 15017869
Alignment:
| Q |
84 |
tgacctggagctgcatatccaaaggtgcctgcaaaagaagtcatgttggatgaattgggatttaggaacttggatgttccgaagtctgagacatgagcta |
183 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||| || |||||||||||||||| |
|
|
| T |
15018114 |
tgacctggagcagcatatccaaaggtgcctgcaaaagaagtcatattggatgaattgggatttagaaacttagatgttccaaaatctgagacatgagcta |
15018015 |
T |
|
| Q |
184 |
cgtattccaaatccaaaataacattcttgctggatatatctcgatgaacaataggaggtgaacaatcatgatgcagataacataaagcattagctatatc |
283 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||| |||||||||||||| |
|
|
| T |
15018014 |
catattccaaatccaaaataacattcttgctggatatatctcgatgaactataggaggggaacaatcatgatgcagatagcataaggcattagctatatc |
15017915 |
T |
|
| Q |
284 |
tttaatgacattcaccctcctattccaatcaaattcaggagcttgt |
329 |
Q |
| |
|
|||||| | |||||||||| |||||||||||||||||| ||||||| |
|
|
| T |
15017914 |
tttaataatattcaccctcttattccaatcaaattcagcagcttgt |
15017869 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 74 - 329
Target Start/End: Complemental strand, 15012009 - 15011754
Alignment:
| Q |
74 |
gaaaagtaattgacctggagctgcatatccaaaggtgcctgcaaaagaagtcatgttggatgaattgggatttaggaacttggatgttccgaagtctgag |
173 |
Q |
| |
|
|||||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||| ||||||||| |
|
|
| T |
15012009 |
gaaaaggaattgacctggagcggcatatccaaaggtgcctgcaaaagaagtcatattggatgaattgggatttagaaacttagatgttccaaagtctgag |
15011910 |
T |
|
| Q |
174 |
acatgagctacgtattccaaatccaaaataacattcttgctggatatatctcgatgaacaataggaggtgaacaatcatgatgcagataacataaagcat |
273 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||| |||| |||| |
|
|
| T |
15011909 |
acatgagctacatattccaaatccaaaataacattcttgctggatatatctcgatgaacaataggaggcgagcagtcatgatgcagatagaataaggcat |
15011810 |
T |
|
| Q |
274 |
tagctatatctttaatgacattcaccctcctattccaatcaaattcaggagcttgt |
329 |
Q |
| |
|
|||||||||||||||| | |||||||||| ||||||||||||||||| ||||||| |
|
|
| T |
15011809 |
tagctatatctttaataatattcaccctcttattccaatcaaattcaccagcttgt |
15011754 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 63 - 329
Target Start/End: Original strand, 14521715 - 14521982
Alignment:
| Q |
63 |
ttaatataaa-agaaaagtaattgacctggagctgcatatccaaaggtgcctgcaaaagaagtcatgttggatgaattgggatttaggaacttggatgtt |
161 |
Q |
| |
|
|||||||||| | ||||| | |||||||||||| |||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||| |||||| |
|
|
| T |
14521715 |
ttaatataaacaaaaaaggagttgacctggagcagcatatccaaaggtgcctgcaaaagaagtcatattcgatgaattgggatttagaaacttagatgtt |
14521814 |
T |
|
| Q |
162 |
ccgaagtctgagacatgagctacgtattccaaatccaaaataacattcttgctggatatatctcgatgaacaataggaggtgaacaatcatgatgcagat |
261 |
Q |
| |
|
|| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| |||| |
|
|
| T |
14521815 |
ccaaagtctgagacatgagctacacattccaaatccaaaataacattcttgctggatatatctcgatgaacaataggaggtgagcagtcatgatgtagat |
14521914 |
T |
|
| Q |
262 |
aacataaagcattagctatatctttaatgacattcaccctcctattccaatcaaattcaggagcttgt |
329 |
Q |
| |
|
| ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||| |
|
|
| T |
14521915 |
agaataaagcattagctatatctttaatgatattcaccctcctactccaatcaaattcactagcttgt |
14521982 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 81 - 329
Target Start/End: Complemental strand, 15033454 - 15033206
Alignment:
| Q |
81 |
aattgacctggagctgcatatccaaaggtgcctgcaaaagaagtcatgttggatgaattgggatttaggaacttggatgttccgaagtctgagacatgag |
180 |
Q |
| |
|
|||| ||||||||| | ||||||||| |||||||||||||||||||| ||||||||||||||||| || ||||| |||||||| |||||||||||||||| |
|
|
| T |
15033454 |
aattcacctggagcagtatatccaaaagtgcctgcaaaagaagtcatattggatgaattgggattgagaaacttagatgttccaaagtctgagacatgag |
15033355 |
T |
|
| Q |
181 |
ctacgtattccaaatccaaaataacattcttgctggatatatctcgatgaacaataggaggtgaacaatcatgatgcagataacataaagcattagctat |
280 |
Q |
| |
|
|||| ||||||||||||||||| |||||||||||||||||||| ||||||||||| | |||||||||||||||||||| ||| ||||||||||||||||| |
|
|
| T |
15033354 |
ctacatattccaaatccaaaatgacattcttgctggatatatcgcgatgaacaattgaaggtgaacaatcatgatgcatatagcataaagcattagctat |
15033255 |
T |
|
| Q |
281 |
atctttaatgacattcaccctcctattccaatcaaattcaggagcttgt |
329 |
Q |
| |
|
||||||||| |||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
15033254 |
atctttaataacatccaccctcctattccaatcaaattcaggagcttgt |
15033206 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 137 - 316
Target Start/End: Complemental strand, 14468749 - 14468570
Alignment:
| Q |
137 |
attgggatttaggaacttggatgttccgaagtctgagacatgagctacgtattccaaatccaaaataacattcttgctggatatatctcgatgaacaata |
236 |
Q |
| |
|
||||||||| || ||||| | ||||||||| |||||||||||||| || |||||||||||||||| || |||||| ||||||||||| ||||||||||| |
|
|
| T |
14468749 |
attgggattgagaaacttagctgttccgaaatctgagacatgagccacatattccaaatccaaaacaatattcttactggatatatcgcgatgaacaatt |
14468650 |
T |
|
| Q |
237 |
ggaggtgaacaatcatgatgcagataacataaagcattagctatatctttaatgacattcaccctcctattccaatcaaa |
316 |
Q |
| |
|
| ||||| | ||||||||||| || ||| |||||||||| ||| |||||||||||||||||||||||||| ||||| |
|
|
| T |
14468649 |
gatggtgagcgatcatgatgcatgtagtatagtgcattagctacatccttaatgacattcaccctcctattccagtcaaa |
14468570 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 140 - 310
Target Start/End: Complemental strand, 14483694 - 14483524
Alignment:
| Q |
140 |
gggatttaggaacttggatgttccgaagtctgagacatgagctacgtattccaaatccaaaataacattcttgctggatatatctcgatgaacaatagga |
239 |
Q |
| |
|
|||||| || ||||| | ||||||||| |||||||||||||| || |||||||||||||||| || |||||| ||||||||||| |||||||| || | | |
|
|
| T |
14483694 |
gggattaagaaacttagctgttccgaaatctgagacatgagccacatattccaaatccaaaacaatattcttactggatatatcgcgatgaactattgaa |
14483595 |
T |
|
| Q |
240 |
ggtgaacaatcatgatgcagataacataaagcattagctatatctttaatgacattcaccctcctattcca |
310 |
Q |
| |
|
||||| | ||||||||||| || ||||||||||||||| |||||||||| || |||||||||||||||| |
|
|
| T |
14483594 |
ggtgagcgatcatgatgcatgtagtataaagcattagctacatctttaatggcaatcaccctcctattcca |
14483524 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 140 - 316
Target Start/End: Complemental strand, 14504925 - 14504749
Alignment:
| Q |
140 |
gggatttaggaacttggatgttccgaagtctgagacatgagctacgtattccaaatccaaaataacattcttgctggatatatctcgatgaacaatagga |
239 |
Q |
| |
|
|||||| || ||||| | ||||||||| || ||||||||||| || |||||||||||||||| || |||||| || |||||||| ||||||||||| | | |
|
|
| T |
14504925 |
gggattaagaaacttagctgttccgaaatccgagacatgagccacatattccaaatccaaaacaatattcttactcgatatatcgcgatgaacaattgca |
14504826 |
T |
|
| Q |
240 |
ggtgaacaatcatgatgcagataacataaagcattagctatatctttaatgacattcaccctcctattccaatcaaa |
316 |
Q |
| |
|
||||| | ||||||||||| || ||||||||||||||| |||||||||| ||||||||| ||||||||||||| |
|
|
| T |
14504825 |
ggtgagcgatcatgatgcatgtagtataaagcattagctacatctttaatggatttcaccctcttattccaatcaaa |
14504749 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 97; Significance: 1e-47; HSPs: 14)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 81 - 317
Target Start/End: Original strand, 15676187 - 15676423
Alignment:
| Q |
81 |
aattgacctggagctgcatatccaaaggtgcctgcaaaagaagtcatgttggatgaattgggatttaggaacttggatgttccgaagtctgagacatgag |
180 |
Q |
| |
|
|||| ||||||||| ||||||||| |||| |||||||| || |||| ||||| |||||| |||||||| | ||| | | |||| |||||||||||| ||| |
|
|
| T |
15676187 |
aattaacctggagcagcatatccataggtacctgcaaatgatgtcaagttggttgaattaggatttagaagcttagctattccaaagtctgagacacgag |
15676286 |
T |
|
| Q |
181 |
ctacgtattccaaatccaaaataacattcttgctggatatatctcgatgaacaataggaggtgaacaatcatgatgcagataacataaagcattagctat |
280 |
Q |
| |
|
| || ||||| ||||||| | | ||||||||| |||||||||||||||||||| |||||||| |||||||| |||| ||| ||||||||||||||| |
|
|
| T |
15676287 |
ccacatattctaaatccagtaggatattcttgcttgatatatctcgatgaacaattggaggtgagcaatcatggtgcatatagtataaagcattagctac |
15676386 |
T |
|
| Q |
281 |
atctttaatgacattcaccctcctattccaatcaaat |
317 |
Q |
| |
|
||||||||| |||||||||| | |||||||||||||| |
|
|
| T |
15676387 |
atctttaataacattcacccgcttattccaatcaaat |
15676423 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 86 - 317
Target Start/End: Complemental strand, 17849525 - 17849294
Alignment:
| Q |
86 |
acctggagctgcatatccaaaggtgcctgcaaaagaagtcatgttggatgaattgggatttaggaacttggatgttccgaagtctgagacatgagctacg |
185 |
Q |
| |
|
||||||||| |||||||||| ||| |||||||| || ||| |||| ||||| |||||||| | || | | |||| ||||| |||||||||||||| |
|
|
| T |
17849525 |
acctggagcagcatatccaatggttcctgcaaatgaggtccaattggttgaatcaggatttagaagtttagctattccaaagtcagagacatgagctaca |
17849426 |
T |
|
| Q |
186 |
tattccaaatccaaaataacattcttgctggatatatctcgatgaacaataggaggtgaacaatcatgatgcagataacataaagcattagctatatctt |
285 |
Q |
| |
|
|||||||| || | || | ||||||||| |||||||||||||||||||| |||||||| |||| |||||||| |||||||| ||||||||||| ||||| |
|
|
| T |
17849425 |
tattccaagtctagaagtatattcttgcttgatatatctcgatgaacaatcggaggtgagcaatgatgatgcatataacatagagcattagctacatctt |
17849326 |
T |
|
| Q |
286 |
taatgacattcaccctcctattccaatcaaat |
317 |
Q |
| |
|
||||||||||||||| | |||||||||||||| |
|
|
| T |
17849325 |
taatgacattcacccgcttattccaatcaaat |
17849294 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 81 - 317
Target Start/End: Original strand, 17825208 - 17825444
Alignment:
| Q |
81 |
aattgacctggagctgcatatccaaaggtgcctgcaaaagaagtcatgttggatgaattgggatttaggaacttggatgttccgaagtctgagacatgag |
180 |
Q |
| |
|
|||| |||||| || |||||||||| ||| |||||||| || ||| |||| ||||| ||||| || | ||| | | |||| ||||| |||||||||| |
|
|
| T |
17825208 |
aatttacctggtgcagcatatccaatggttcctgcaaatgaggtccaattggttgaatcaggattaagaagcttagctattccaaagtcagagacatgag |
17825307 |
T |
|
| Q |
181 |
ctacgtattccaaatccaaaataacattcttgctggatatatctcgatgaacaataggaggtgaacaatcatgatgcagataacataaagcattagctat |
280 |
Q |
| |
|
| || |||||||||| | || | ||||||||| |||||||||||||||||||| |||||||| |||| |||||||| |||||||| |||||||||||| |
|
|
| T |
17825308 |
ccacatattccaaatttagaagtatattcttgcttgatatatctcgatgaacaattggaggtgagcaatgatgatgcatataacatacagcattagctat |
17825407 |
T |
|
| Q |
281 |
atctttaatgacattcaccctcctattccaatcaaat |
317 |
Q |
| |
|
|||||||||| ||||||||||| ||||||| |||||| |
|
|
| T |
17825408 |
atctttaatggcattcaccctcttattccagtcaaat |
17825444 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 158 - 317
Target Start/End: Complemental strand, 14606829 - 14606670
Alignment:
| Q |
158 |
tgttccgaagtctgagacatgagctacgtattccaaatccaaaataacattcttgctggatatatctcgatgaacaataggaggtgaacaatcatgatgc |
257 |
Q |
| |
|
|||||| ||||| ||||||||| | || ||||| |||||| || || ||||||||| |||||||||||||||||||| ||||| || |||||||||||| |
|
|
| T |
14606829 |
tgttccaaagtcagagacatgacccacacattccgaatccagaagaatattcttgcttgatatatctcgatgaacaattggaggcgagcaatcatgatgc |
14606730 |
T |
|
| Q |
258 |
agataacataaagcattagctatatctttaatgacattcaccctcctattccaatcaaat |
317 |
Q |
| |
|
| || ||||||||||| |||| |||||||||||||||||||||| |||||||||||||| |
|
|
| T |
14606729 |
atgtagcataaagcattggctacatctttaatgacattcaccctcttattccaatcaaat |
14606670 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 158 - 317
Target Start/End: Complemental strand, 16026006 - 16025847
Alignment:
| Q |
158 |
tgttccgaagtctgagacatgagctacgtattccaaatccaaaataacattcttgctggatatatctcgatgaacaataggaggtgaacaatcatgatgc |
257 |
Q |
| |
|
|||||| ||||| ||||||||| | || ||||| |||||| || || ||||||||| |||||||||||||||||||| ||||| || |||||||||||| |
|
|
| T |
16026006 |
tgttccaaagtcagagacatgacccacacattccgaatccagaagaatattcttgcttgatatatctcgatgaacaattggaggcgagcaatcatgatgc |
16025907 |
T |
|
| Q |
258 |
agataacataaagcattagctatatctttaatgacattcaccctcctattccaatcaaat |
317 |
Q |
| |
|
| || ||||||||||| |||| |||||||||||||||||||||| |||||||||||||| |
|
|
| T |
16025906 |
atgtagcataaagcattggctacatctttaatgacattcaccctcttattccaatcaaat |
16025847 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 86 - 317
Target Start/End: Original strand, 15664357 - 15664588
Alignment:
| Q |
86 |
acctggagctgcatatccaaaggtgcctgcaaaagaagtcatgttggatgaattgggatttaggaacttggatgttccgaagtctgagacatgagctacg |
185 |
Q |
| |
|
|||||||| ||||||||| ||||||||||||| || ||| ||| |||||| ||||| || | ||| | ||||| |||||||||||| ||| || |
|
|
| T |
15664357 |
acctggagaagcatatccataggtgcctgcaaatgaggtccaattgtctgaattaggattaagaagcttagccgttccaaagtctgagacacaagccaca |
15664456 |
T |
|
| Q |
186 |
tattccaaatccaaaataacattcttgctggatatatctcgatgaacaataggaggtgaacaatcatgatgcagataacataaagcattagctatatctt |
285 |
Q |
| |
|
||||| ||||||| || || ||||||||| |||||||||||||||||||| ||||| | |||||||| |||| ||| ||||||||||| |||||||||| |
|
|
| T |
15664457 |
tattctaaatccagaagaatattcttgcttgatatatctcgatgaacaattggaggggtgcaatcatggtgcatatagcataaagcattcgctatatctt |
15664556 |
T |
|
| Q |
286 |
taatgacattcaccctcctattccaatcaaat |
317 |
Q |
| |
|
|||| |||||||||||| | |||||| ||||| |
|
|
| T |
15664557 |
taataacattcaccctctttttccaaccaaat |
15664588 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 81 - 317
Target Start/End: Complemental strand, 16173559 - 16173323
Alignment:
| Q |
81 |
aattgacctggagctgcatatccaaaggtgcctgcaaaagaagtcatgttggatgaattgggatttaggaacttggatgttccgaagtctgagacatgag |
180 |
Q |
| |
|
|||| ||||||||| ||||||||||| |||| |||||| |||||| | | | |||| |||| || | ||| | |||||| ||||| |||||||||| |
|
|
| T |
16173559 |
aattaacctggagcagcatatccaaatgtgcatgcaaatgaagtcgaggaagttaaattaggatcaagaagcttagctgttccaaagtcagagacatgag |
16173460 |
T |
|
| Q |
181 |
ctacgtattccaaatccaaaataacattcttgctggatatatctcgatgaacaataggaggtgaacaatcatgatgcagataacataaagcattagctat |
280 |
Q |
| |
|
| || |||| |||||| || || ||||||||| |||||||||||||||||||| ||||| || |||||||| |||| ||| |||||||||||||||| |
|
|
| T |
16173459 |
ccacacattcggaatccagaagaatattcttgcttgatatatctcgatgaacaattggaggcgagcaatcatggtgcatatagcataaagcattagctac |
16173360 |
T |
|
| Q |
281 |
atctttaatgacattcaccctcctattccaatcaaat |
317 |
Q |
| |
|
|||||||||||||||||||| | | ||||||| |||| |
|
|
| T |
16173359 |
atctttaatgacattcacccgctttttccaattaaat |
16173323 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 158 - 316
Target Start/End: Complemental strand, 16103814 - 16103656
Alignment:
| Q |
158 |
tgttccgaagtctgagacatgagctacgtattccaaatccaaaataacattcttgctggatatatctcgatgaacaataggaggtgaacaatcatgatgc |
257 |
Q |
| |
|
|||||| ||||| |||||| |||| || ||||| ||||||| || || ||||||||| |||||||||| |||||||| ||||| || |||||||||||| |
|
|
| T |
16103814 |
tgttccaaagtccgagacacgagccacatattctaaatccagaagaatattcttgcttgatatatctctgtgaacaattggaggcgagcaatcatgatgc |
16103715 |
T |
|
| Q |
258 |
agataacataaagcattagctatatctttaatgacattcaccctcctattccaatcaaa |
316 |
Q |
| |
|
| || |||||||||||||||| |||||||| ||||||||| ||| | ||||||||||| |
|
|
| T |
16103714 |
atgtagcataaagcattagctacatctttaaggacattcactctcttgttccaatcaaa |
16103656 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 204 - 330
Target Start/End: Complemental strand, 31159701 - 31159575
Alignment:
| Q |
204 |
acattcttgctggatatatctcgatgaacaataggaggtgaacaatcatgatgcagataacataaagcattagctatatctttaatgacattcaccctcc |
303 |
Q |
| |
|
||||||||||| |||||||| ||||||||||||||||| |||||||||||||||| || | |||||||| || | | |||||| |||||||||||| |
|
|
| T |
31159701 |
acattcttgctcgatatatcacgatgaacaataggaggagaacaatcatgatgcaagtaggacaaagcattggccacacctttaacaacattcaccctct |
31159602 |
T |
|
| Q |
304 |
tattccaatcaaattcaggagcttgtg |
330 |
Q |
| |
|
| | |||||||||| ||| ||||||| |
|
|
| T |
31159601 |
tttcccaatcaaatgcagtggcttgtg |
31159575 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 204 - 330
Target Start/End: Complemental strand, 31241804 - 31241678
Alignment:
| Q |
204 |
acattcttgctggatatatctcgatgaacaataggaggtgaacaatcatgatgcagataacataaagcattagctatatctttaatgacattcaccctcc |
303 |
Q |
| |
|
||||||||||| |||||||| ||||||||||||||||| |||||||||||||||| || | |||||||| || | | |||||| |||||||||||| |
|
|
| T |
31241804 |
acattcttgctcgatatatcacgatgaacaataggaggagaacaatcatgatgcaagtaggacaaagcattggccacacctttaacaacattcaccctct |
31241705 |
T |
|
| Q |
304 |
tattccaatcaaattcaggagcttgtg |
330 |
Q |
| |
|
| | |||||||||| ||| ||||||| |
|
|
| T |
31241704 |
tttcccaatcaaatgcagtggcttgtg |
31241678 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 330
Target Start/End: Complemental strand, 31140869 - 31140743
Alignment:
| Q |
204 |
acattcttgctggatatatctcgatgaacaataggaggtgaacaatcatgatgcagataacataaagcattagctatatctttaatgacattcaccctcc |
303 |
Q |
| |
|
||||||||||| |||||||| ||||||| ||||||||| |||||||||||||||| || | |||||||| || | | |||||| |||||||||||| |
|
|
| T |
31140869 |
acattcttgcttgatatatcacgatgaataataggaggagaacaatcatgatgcaagtaggacaaagcattggccacacctttaacaacattcaccctct |
31140770 |
T |
|
| Q |
304 |
tattccaatcaaattcaggagcttgtg |
330 |
Q |
| |
|
| | |||||||||| ||| ||||||| |
|
|
| T |
31140769 |
tttcccaatcaaatgcagtggcttgtg |
31140743 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 206 - 317
Target Start/End: Complemental strand, 31103508 - 31103397
Alignment:
| Q |
206 |
attcttgctggatatatctcgatgaacaataggaggtgaacaatcatgatgcagataacataaagcattagctatatctttaatgacattcaccctccta |
305 |
Q |
| |
|
||||||||| |||||||| ||||||| |||||||||||| ||||||||||||| || | |||||||| || | | |||||| |||||||||||| | |
|
|
| T |
31103508 |
attcttgctcgatatatcacgatgaataataggaggtgagcaatcatgatgcaagtaggacaaagcattggcgacacctttaacaacattcaccctcttt |
31103409 |
T |
|
| Q |
306 |
ttccaatcaaat |
317 |
Q |
| |
|
| |||||||||| |
|
|
| T |
31103408 |
tcccaatcaaat |
31103397 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 317
Target Start/End: Complemental strand, 31184632 - 31184477
Alignment:
| Q |
162 |
ccgaagtctgagacatgagctacgtattccaaatccaaaataacattcttgctggatatatctcgatgaacaataggaggtgaacaatcatgatgcagat |
261 |
Q |
| |
|
|||||||| |||||||||||| | || || | || | || |||||| || || |||||||| |||||||||||||||||||| ||||| ||||||| | |
|
|
| T |
31184632 |
ccgaagtcggagacatgagcttcatagtcaagattgataagaacatttttactcgatatatcacgatgaacaataggaggtgagcaatcgtgatgcaagt |
31184533 |
T |
|
| Q |
262 |
aacataaagcattagctatatctttaatgacattcaccctcctattccaatcaaat |
317 |
Q |
| |
|
| | |||||||| || | | |||||| |||||||||||| | | |||||||||| |
|
|
| T |
31184532 |
aggacaaagcattggcgacacctttaacaacattcaccctcttttcccaatcaaat |
31184477 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 317
Target Start/End: Complemental strand, 31059067 - 31058953
Alignment:
| Q |
203 |
aacattcttgctggatatatctcgatgaacaataggaggtgaacaatcatgatgcagataacataaagcattagctatatctttaatgacattcaccctc |
302 |
Q |
| |
|
|||||||||||| |||||||| ||||||| |||||||| || ||||||||||||| || | |||||||| || | | |||||| |||||||||||| |
|
|
| T |
31059067 |
aacattcttgcttgatatatcgcgatgaattataggaggcgagcaatcatgatgcaagtaggacaaagcattggccacacctttaacaacattcaccctc |
31058968 |
T |
|
| Q |
303 |
ctattccaatcaaat |
317 |
Q |
| |
|
| | |||||||||| |
|
|
| T |
31058967 |
ttttcccaatcaaat |
31058953 |
T |
|
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Target: scaffold0289 (Bit Score: 73; Significance: 3e-33; HSPs: 2)
Name: scaffold0289
Description:
Target: scaffold0289; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 89 - 317
Target Start/End: Original strand, 13519 - 13747
Alignment:
| Q |
89 |
tggagctgcatatccaaaggtgcctgcaaaagaagtcatgttggatgaattgggatttaggaacttggatgttccgaagtctgagacatgagctacgtat |
188 |
Q |
| |
|
|||||| ||||||||| ||||||||||||| || ||| ||| |||||| | || || | ||| | |||||| ||||| |||||| |||| || ||| |
|
|
| T |
13519 |
tggagcagcatatccataggtgcctgcaaatgaggtccaattgtctgaattagcatcaagaagcttagctgttccaaagtccgagacacgagccacatat |
13618 |
T |
|
| Q |
189 |
tccaaatccaaaataacattcttgctggatatatctcgatgaacaataggaggtgaacaatcatgatgcagataacataaagcattagctatatctttaa |
288 |
Q |
| |
|
|| ||||||| || || ||||||||| |||||||||||||||||||| ||||| | |||||||| |||| ||| ||||||||||| ||||||||||||| |
|
|
| T |
13619 |
tctaaatccagaagaatattcttgcttgatatatctcgatgaacaattggaggggtgcaatcatggtgcatatagcataaagcattcgctatatctttaa |
13718 |
T |
|
| Q |
289 |
tgacattcaccctcctattccaatcaaat |
317 |
Q |
| |
|
| |||||||||||| | |||||| ||||| |
|
|
| T |
13719 |
taacattcaccctctttttccaaccaaat |
13747 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0289; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 186 - 317
Target Start/End: Original strand, 4783 - 4914
Alignment:
| Q |
186 |
tattccaaatccaaaataacattcttgctggatatatctcgatgaacaataggaggtgaacaatcatgatgcagataacataaagcattagctatatctt |
285 |
Q |
| |
|
||||| ||||||| || || ||||||||| |||||||||||||||||||| ||||| | |||||||| |||| ||| ||||||||||| |||||||||| |
|
|
| T |
4783 |
tattctaaatccagaagaatattcttgcttgatatatctcgatgaacaattggaggggtgcaatcatggtgcatatagcataaagcattcgctatatctt |
4882 |
T |
|
| Q |
286 |
taatgacattcaccctcctattccaatcaaat |
317 |
Q |
| |
|
|||| |||||||||||| | |||||| ||||| |
|
|
| T |
4883 |
taataacattcaccctctttttccaaccaaat |
4914 |
T |
|
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Target: chr8 (Bit Score: 69; Significance: 6e-31; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 86 - 258
Target Start/End: Complemental strand, 17028837 - 17028665
Alignment:
| Q |
86 |
acctggagctgcatatccaaaggtgcctgcaaaagaagtcatgttggatgaattgggatttaggaacttggatgttccgaagtctgagacatgagctacg |
185 |
Q |
| |
|
||||||||| | ||||||||||||||| |||||| ||| ||||| |||| | |||| || ||||| | ||||||||| |||||||||||||| || |
|
|
| T |
17028837 |
acctggagcagtgtatccaaaggtgcctacaaaagcggtccaattggaagaatcgagattaagaaacttagctgttccgaaatctgagacatgagcaaca |
17028738 |
T |
|
| Q |
186 |
tattccaaatccaaaataacattcttgctggatatatctcgatgaacaataggaggtgaacaatcatgatgca |
258 |
Q |
| |
|
|||||||||||||||| ||||||||| ||||||||||| ||||||||||| | |||||| ||||||| ||||| |
|
|
| T |
17028737 |
tattccaaatccaaaacaacattcttactggatatatcacgatgaacaattgaaggtgagcaatcatcatgca |
17028665 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 86 - 258
Target Start/End: Complemental strand, 17559273 - 17559101
Alignment:
| Q |
86 |
acctggagctgcatatccaaaggtgcctgcaaaagaagtcatgttggatgaattgggatttaggaacttggatgttccgaagtctgagacatgagctacg |
185 |
Q |
| |
|
||||||||| | ||||||||||||||| |||||| ||| ||||| |||| | |||| || ||||| | ||||||||| |||||||||||||| || |
|
|
| T |
17559273 |
acctggagcagtgtatccaaaggtgcctacaaaagcggtccaattggaagaatcgagattaagaaacttagctgttccgaaatctgagacatgagcaaca |
17559174 |
T |
|
| Q |
186 |
tattccaaatccaaaataacattcttgctggatatatctcgatgaacaataggaggtgaacaatcatgatgca |
258 |
Q |
| |
|
|||||||||||||||| ||||||||| ||||||||||| ||||||||||| | |||||| ||||||| ||||| |
|
|
| T |
17559173 |
tattccaaatccaaaacaacattcttactggatatatcacgatgaacaattgaaggtgagcaatcatcatgca |
17559101 |
T |
|
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Target: chr5 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 258
Target Start/End: Complemental strand, 37027661 - 37027592
Alignment:
| Q |
189 |
tccaaatccaaaataacattcttgctggatatatctcgatgaacaataggaggtgaacaatcatgatgca |
258 |
Q |
| |
|
|||||||| |||| |||||| ||||| ||||| || ||||||||||||||||| | ||| ||||||||| |
|
|
| T |
37027661 |
tccaaatctaaaagaacatttttgctcgatatgtcgcgatgaacaataggaggagcgcaaccatgatgca |
37027592 |
T |
|
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