View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2585_low_43 (Length: 291)

Name: NF2585_low_43
Description: NF2585
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2585_low_43
NF2585_low_43
[»] chr3 (19 HSPs)
chr3 (1-174)||(19390125-19390298)
chr3 (1-174)||(6269441-6269614)
chr3 (1-173)||(22968459-22968631)
chr3 (1-174)||(39771769-39771942)
chr3 (1-169)||(34084137-34084305)
chr3 (4-173)||(11018230-11018399)
chr3 (1-153)||(45182981-45183133)
chr3 (1-153)||(6930909-6931061)
chr3 (2-153)||(19565517-19565668)
chr3 (2-153)||(45335875-45336025)
chr3 (1-170)||(40081756-40081922)
chr3 (4-173)||(6503587-6503756)
chr3 (1-154)||(27935177-27935330)
chr3 (1-153)||(33040953-33041105)
chr3 (1-153)||(35514266-35514414)
chr3 (27-131)||(5135291-5135397)
chr3 (96-169)||(22922141-22922214)
chr3 (53-153)||(5354709-5354809)
chr3 (116-153)||(6890998-6891035)
[»] chr2 (23 HSPs)
chr2 (1-174)||(41251649-41251822)
chr2 (1-173)||(6403819-6403991)
chr2 (1-173)||(42439966-42440138)
chr2 (1-173)||(17445056-17445226)
chr2 (1-173)||(35962695-35962867)
chr2 (3-174)||(18981596-18981766)
chr2 (1-173)||(32127156-32127328)
chr2 (1-169)||(31581637-31581805)
chr2 (16-173)||(2958131-2958287)
chr2 (1-173)||(16405580-16405752)
chr2 (1-153)||(45418583-45418735)
chr2 (5-147)||(771005-771147)
chr2 (1-153)||(44084618-44084770)
chr2 (1-153)||(8147351-8147504)
chr2 (1-170)||(2285845-2286014)
chr2 (1-135)||(12756852-12756986)
chr2 (4-151)||(8059351-8059498)
chr2 (45-153)||(26237957-26238065)
chr2 (5-134)||(26162721-26162847)
chr2 (27-129)||(4555250-4555354)
chr2 (27-144)||(7072589-7072710)
chr2 (123-170)||(34523223-34523270)
chr2 (78-133)||(34905969-34906024)
[»] chr7 (21 HSPs)
chr7 (1-169)||(8394109-8394277)
chr7 (1-173)||(14777122-14777294)
chr7 (1-174)||(5555466-5555639)
chr7 (1-173)||(3114111-3114283)
chr7 (1-169)||(36630800-36630968)
chr7 (5-153)||(34389075-34389223)
chr7 (1-153)||(37002159-37002311)
chr7 (1-153)||(8867746-8867898)
chr7 (1-144)||(35090177-35090320)
chr7 (1-149)||(26624749-26624898)
chr7 (1-130)||(38638251-38638380)
chr7 (1-134)||(40920018-40920151)
chr7 (1-153)||(33685564-33685716)
chr7 (1-146)||(43184483-43184628)
chr7 (1-135)||(36658199-36658333)
chr7 (1-153)||(7002725-7002877)
chr7 (1-153)||(7048596-7048748)
chr7 (27-94)||(10868514-10868583)
chr7 (78-166)||(26502797-26502885)
chr7 (78-166)||(26589829-26589917)
chr7 (108-153)||(10876829-10876874)
[»] chr4 (41 HSPs)
chr4 (1-174)||(20129289-20129462)
chr4 (1-174)||(25930687-25930860)
chr4 (1-174)||(26439294-26439467)
chr4 (1-173)||(13012168-13012340)
chr4 (1-173)||(34407299-34407471)
chr4 (1-169)||(36382361-36382528)
chr4 (1-173)||(47500753-47500925)
chr4 (1-173)||(43355884-43356056)
chr4 (1-173)||(29319720-29319892)
chr4 (4-173)||(43143602-43143771)
chr4 (4-170)||(10352902-10353068)
chr4 (5-170)||(17511252-17511417)
chr4 (1-150)||(3292911-3293060)
chr4 (1-170)||(40528996-40529167)
chr4 (1-153)||(6690250-6690402)
chr4 (1-153)||(30216757-30216909)
chr4 (4-152)||(42333794-42333942)
chr4 (1-170)||(50205092-50205261)
chr4 (2-152)||(30077647-30077797)
chr4 (1-151)||(48989330-48989480)
chr4 (1-147)||(29995998-29996144)
chr4 (1-170)||(6235515-6235672)
chr4 (1-150)||(28877265-28877414)
chr4 (1-136)||(44156668-44156803)
chr4 (1-153)||(26448053-26448204)
chr4 (1-129)||(35545977-35546105)
chr4 (1-118)||(1817752-1817869)
chr4 (27-151)||(30109958-30110084)
chr4 (56-141)||(48129978-48130063)
chr4 (1-75)||(13392896-13392970)
chr4 (1-75)||(13396035-13396109)
chr4 (68-170)||(27363344-27363446)
chr4 (53-151)||(45194178-45194276)
chr4 (112-173)||(7769308-7769369)
chr4 (116-153)||(49908782-49908819)
chr4 (60-128)||(6254569-6254637)
chr4 (116-153)||(5517494-5517531)
chr4 (117-151)||(17554998-17555032)
chr4 (117-170)||(6212029-6212082)
chr4 (92-152)||(13392976-13393036)
chr4 (92-152)||(13396115-13396175)
[»] chr5 (23 HSPs)
chr5 (1-173)||(36293636-36293808)
chr5 (1-170)||(10033910-10034079)
chr5 (1-170)||(13817960-13818129)
chr5 (1-174)||(39434675-39434848)
chr5 (1-173)||(26283333-26283505)
chr5 (1-169)||(1776391-1776559)
chr5 (2-173)||(3155647-3155818)
chr5 (1-173)||(39657521-39657693)
chr5 (1-135)||(16155015-16155149)
chr5 (1-153)||(17332566-17332718)
chr5 (5-173)||(37254621-37254789)
chr5 (1-153)||(12278875-12279027)
chr5 (1-153)||(31680367-31680519)
chr5 (1-123)||(16333891-16334013)
chr5 (1-166)||(19985926-19986091)
chr5 (1-153)||(31501731-31501883)
chr5 (1-139)||(33430335-33430473)
chr5 (1-134)||(43068896-43069029)
chr5 (1-151)||(36291373-36291523)
chr5 (27-140)||(28801300-28801415)
chr5 (117-170)||(14316641-14316694)
chr5 (123-170)||(26543902-26543949)
chr5 (104-140)||(202652-202688)
[»] scaffold0069 (1 HSPs)
scaffold0069 (1-173)||(17822-17994)
[»] scaffold0002 (1 HSPs)
scaffold0002 (1-173)||(480472-480644)
[»] chr6 (13 HSPs)
chr6 (1-173)||(398597-398769)
chr6 (1-173)||(34948773-34948945)
chr6 (1-176)||(13837798-13837973)
chr6 (1-153)||(28996730-28996882)
chr6 (1-153)||(18339106-18339258)
chr6 (2-147)||(29743289-29743434)
chr6 (1-137)||(33229351-33229487)
chr6 (57-153)||(31028435-31028531)
chr6 (68-153)||(24697899-24697984)
chr6 (117-153)||(13647017-13647053)
chr6 (68-138)||(24695502-24695572)
chr6 (78-138)||(3050094-3050154)
chr6 (117-153)||(34385519-34385555)
[»] chr1 (14 HSPs)
chr1 (1-173)||(26144235-26144407)
chr1 (1-173)||(7433425-7433597)
chr1 (1-166)||(32982071-32982236)
chr1 (9-170)||(42310964-42311125)
chr1 (1-149)||(3828988-3829135)
chr1 (5-153)||(17445313-17445461)
chr1 (5-173)||(35907532-35907700)
chr1 (5-145)||(321396-321536)
chr1 (47-173)||(23313218-23313345)
chr1 (174-275)||(38469492-38469593)
chr1 (27-170)||(41972314-41972458)
chr1 (27-153)||(33489687-33489815)
chr1 (117-153)||(44352614-44352650)
chr1 (116-153)||(31866977-31867014)
[»] scaffold2142 (1 HSPs)
scaffold2142 (1-173)||(502-674)
[»] chr8 (15 HSPs)
chr8 (1-169)||(15838270-15838437)
chr8 (1-170)||(29728401-29728570)
chr8 (1-174)||(39914494-39914666)
chr8 (1-170)||(3648809-3648978)
chr8 (4-173)||(34136843-34137012)
chr8 (1-149)||(16788040-16788188)
chr8 (4-153)||(4404008-4404157)
chr8 (1-153)||(23402108-23402260)
chr8 (1-153)||(36408551-36408703)
chr8 (1-131)||(9877242-9877372)
chr8 (1-153)||(2729211-2729363)
chr8 (27-137)||(3435285-3435397)
chr8 (1-121)||(42230971-42231089)
chr8 (60-130)||(40470567-40470637)
chr8 (68-153)||(10397122-10397207)
[»] scaffold0502 (1 HSPs)
scaffold0502 (1-153)||(5230-5382)
[»] scaffold0154 (1 HSPs)
scaffold0154 (1-153)||(31480-31632)
[»] scaffold0041 (1 HSPs)
scaffold0041 (1-134)||(52944-53077)
[»] scaffold0769 (1 HSPs)
scaffold0769 (123-170)||(1260-1307)
[»] scaffold0012 (1 HSPs)
scaffold0012 (94-153)||(194028-194087)


Alignment Details
Target: chr3 (Bit Score: 158; Significance: 4e-84; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 19390298 - 19390125
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  19390298 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatagacttttaggttg 19390199  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccacacggtagaaccgcccatga 174  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| |||||||    
T  19390198 agtctaatgtgcaaaaattatcgatcgaacccggacgaccgcccggggtcgccacacggtagaacctcccatga 19390125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 6269441 - 6269614
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  6269441 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgggcttttgggttg 6269540  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccacacggtagaaccgcccatga 174  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||| |||| |||||||||||||||||||||    
T  6269541 agtctaatgtgcaaaaattatcgatcgagtccggacgaccgcccgggatcgctacacggtagaaccgcccatga 6269614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 22968459 - 22968631
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| ||||     
T  22968459 atagtgtgctaaataaaatttcaagacctatttacgtgtgacaatttttagattgcccaaatttttctttttgtaaatgtgttaatgggcttttgggtta 22968558  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccacacggtagaaccgcccatg 173  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  22968559 agtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgctacacggtagaaccgcccatg 22968631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 39771942 - 39771769
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    ||||||||  |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| |||||    
T  39771942 atagtgtgtcaaataaaatttcaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttataaatgtgttaatgggcttttgggttg 39771843  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccacacggtagaaccgcccatga 174  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  39771842 agtctaatgtgcaaaaattatcgaccgagcccgggcgaccgcccggggtcgctacacggtggaaccgcccatga 39771769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 34084137 - 34084305
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  34084137 atagtgtgctaaataaaattccaagacctatttgcgtgtgataattttcatattgcccaaatttttctttttgtaaatgtgttaatggactttttggttg 34084236  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccacacggtagaaccgcc 169  Q
    | | ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  34084237 aatttaatgtgcaaaaattatcgatcgagtccgggcgaccgcccggggtcgccatacggtagaaccgcc 34084305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 4 - 173
Target Start/End: Original strand, 11018230 - 11018399
Alignment:
Q  4 gtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttgagt 103  Q
    ||||||||||||||||||  |||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||| | ||||| ||||||||    
T  11018230 gtgtgctaaataaaattctgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttgggttgagt 11018329  T
Q  104 ctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccacacggtagaaccgcccatg 173  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||||||  |||||  |||||||||||    
T  11018330 ctaatgtgcaaaaattatcgatcgagcctgggcgaccgcccggagtcgccggacggtgaaaccgcccatg 11018399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 45183133 - 45182981
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    |||||||||||||||||||||| ||||||||||  |||||| |||||||||||||||||||||||||||||||||| ||||||||| | ||||| |||||    
T  45183133 atagtgtgctaaataaaattccgagacctatttgtgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttgggttg 45183034  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 153  Q
     |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  45183033 ggtctaatgcgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 45182981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 6930909 - 6931061
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    |||||||||||||||||||||| |||||||||| ||||||| ||||||||||||||| |||||||||||||||||||||||||||| | ||||| |||||    
T  6930909 atagtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcctaaatttttctttttgtaaatgtgttaattggcttttgggttg 6931008  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 153  Q
      ||||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  6931009 gatctaatgcgcaaaaattatcgatcgagcccgggcgaccgtccggggtcgcc 6931061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 2 - 153
Target Start/End: Original strand, 19565517 - 19565668
Alignment:
Q  2 tagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttga 101  Q
    ||||||||||||||||||||| |||||||||| ||||| | ||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||     
T  19565517 tagtgtgctaaataaaattccgagacctatttgcgtgtaagaattttcagattgtccaaatttttctttttgtaaatgtgttaatggattttttggttgg 19565616  T
Q  102 gtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 153  Q
    |||||||||||||||||||||||| || |||||||||||||||||| |||||    
T  19565617 gtctaatgtgcaaaaattatcgattgaacccgggcgaccgcccgggatcgcc 19565668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 2 - 153
Target Start/End: Complemental strand, 45336025 - 45335875
Alignment:
Q  2 tagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttga 101  Q
    |||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||     
T  45336025 tagtgtgctaaataaaattccaagacctatttgcgtgtaagaattttcagattgcccagatttttctttttgtaaatgtgttaat-gactttttggttgg 45335927  T
Q  102 gtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 153  Q
    |||||||||| ||||||||||||| ||| ||||||||||||||| |||||||    
T  45335926 gtctaatgtgtaaaaattatcgattgagtccgggcgaccgcccgaggtcgcc 45335875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 40081756 - 40081922
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    ||||||||||||| ||||| |||||| |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||||| |||||    
T  40081756 atagtgtgctaaaaaaaat-ccaagatctatttgcgtgtgacaattttcaaattgcccaaatttttctttttgtaaatgtgttaatgagctttt-ggttg 40081853  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccacacggtagaaccgccc 170  Q
    |||||||||| |||||||||||||||||||||||||||||  || | ||||||| |||||||||||||||    
T  40081854 agtctaatgttcaaaaattatcgatcgagcccgggcgacc-tccagagtcgccatacggtagaaccgccc 40081922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 4 - 173
Target Start/End: Original strand, 6503587 - 6503756
Alignment:
Q  4 gtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttgagt 103  Q
    ||||||||||||||| ||| |||||||||| | ||||| ||||||||||||||  |||||||||||||||||| |||| |||| | ||||| ||||||||    
T  6503587 gtgtgctaaataaaaatccgagacctatttgcctgtgagaattttcagattgcttaaatttttctttttgtaagtgtgctaattggcttttgggttgagt 6503686  T
Q  104 ctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccacacggtagaaccgcccatg 173  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||||||  |||||  |||||||||||    
T  6503687 ctaatttgcaaaaataatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgcccatg 6503756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 27935330 - 27935177
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    ||||| |||||||||||||||| |||||||||| ||| ||| |||||||||||||||||||||||||||||||||| ||||||||||  ||||| |||||    
T  27935330 atagtatgctaaataaaattccgagacctattttcgtatgagaattttcagattgcccaaatttttctttttgtaagtgtgttaatgagcttttgggttg 27935231  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcca 154  Q
     || ||||||||||||||||||||||||||||||||||| |||| |||| ||||    
T  27935230 ggtttaatgtgcaaaaattatcgatcgagcccgggcgactgcccagggttgcca 27935177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 33041105 - 33040953
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    |||||||||||||||||||||| |||||||||| ||||||| |||||||| ||||  ||||||||||||||||||| |||||||||   ||||| |||||    
T  33041105 atagtgtgctaaataaaattccgagacctatttgcgtgtgaaaattttcaaattgttcaaatttttctttttgtaagtgtgttaattagcttttgggttg 33041006  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 153  Q
     ||||||| ||||||||||||| |||||||||| |||||||||||||||||||    
T  33041005 ggtctaatatgcaaaaattatcaatcgagcccgagcgaccgcccggggtcgcc 33040953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 35514414 - 35514266
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    ||||||||| |||||||||||| |||||||||| || |||| |||||||| |||| |||||||||||||||||    ||||||||||||||||| |||||    
T  35514414 atagtgtgcaaaataaaattcctagacctatttgcgagtgagaattttcatattgtccaaatttttctttttg----tgtgttaatggacttttgggttg 35514319  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 153  Q
      |||| | ||| ||||||||||||||||||||| |||||| |||||||||||    
T  35514318 gatctagtatgcgaaaattatcgatcgagcccggacgaccgtccggggtcgcc 35514266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 5135397 - 5135291
Alignment:
Q  27 cctatttacgtgtgacaattttcagatt--gcccaaatttttctttttgtaaatgtgttaatggacttttaggttgagtctaatgtgcaaaaattatcga 124  Q
    |||||||  |||||| ||||||| ||||  | |||||||||||||||||||| ||||||||||  ||||||||||| ||||||||| ||||||| |||||    
T  5135397 cctatttgtgtgtgagaattttcggattttgtccaaatttttctttttgtaagtgtgttaatgagcttttaggttgggtctaatgtacaaaaataatcga 5135298  T
Q  125 tcgagcc 131  Q
    |||||||    
T  5135297 tcgagcc 5135291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 96 - 169
Target Start/End: Complemental strand, 22922214 - 22922141
Alignment:
Q  96 ggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccacacggtagaaccgcc 169  Q
    |||||||| |||||||||||||| |||||||||||||| ||||||||||||| |||||| ||||| ||||||||    
T  22922214 ggttgagtttaatgtgcaaaaatgatcgatcgagcccgagcgaccgcccgggatcgccatacggtggaaccgcc 22922141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 53 - 153
Target Start/End: Complemental strand, 5354809 - 5354709
Alignment:
Q  53 ttgcccaaatttttctttttgtaaatgtgttaatggacttttaggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgc 152  Q
    |||||||| ||||| |||||  || ||||| ||||| | | |||||||   ||||||||  |||||||  ||||||||||||||||||||||||||||||    
T  5354809 ttgcccaatttttttttttttgaagtgtgtaaatgggcctataggttggacctaatgtgagaaaattaaggatcgagcccgggcgaccgcccggggtcgc 5354710  T
Q  153 c 153  Q
    |    
T  5354709 c 5354709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 116 - 153
Target Start/End: Complemental strand, 6891035 - 6890998
Alignment:
Q  116 aattatcgatcgagcccgggcgaccgcccggggtcgcc 153  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  6891035 aattatcgatcgagcccgggcgaccgcccggtgtcgcc 6890998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 158; Significance: 4e-84; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 41251649 - 41251822
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  41251649 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgggcttttgggttg 41251748  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccacacggtagaaccgcccatga 174  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  41251749 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcactacacggtagaaccgcccatga 41251822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 6403819 - 6403991
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| |||||    
T  6403819 atagtgtgccaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttataaatgtgttaatgaactttttggttg 6403918  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccacacggtagaaccgcccatg 173  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  6403919 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgctacacggtggaaccgcccatg 6403991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 42440138 - 42439966
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||     
T  42440138 atagtgtgctaaataaaattgcaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgggcttttgggttt 42440039  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccacacggtagaaccgcccatg 173  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  42440038 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccatacggtagaaccgcccatg 42439966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 17445056 - 17445226
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  17445056 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgggcttttgggttg 17445155  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccacacggtagaaccgcccatg 173  Q
    ||||||  |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  17445156 agtcta--gtgcaaaaattatcgatcgagctcgggcgaccgcccgaggtcgccacacggtagaaccgcccatg 17445226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 35962867 - 35962695
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||   ||||| |||||    
T  35962867 atagtgtgctaaataaaattccaagacctatttgtgtgtgacaattttcagattgcccaaaattttctttttgtaaatgtgttaataagcttttgggttg 35962768  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccacacggtagaaccgcccatg 173  Q
    |||||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||||||||    
T  35962767 agtctaatgtgcaaaaattatcgatcgagcccggacgaccgcctggggtcgccatacggtagaaccgcccatg 35962695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 3 - 174
Target Start/End: Complemental strand, 18981766 - 18981596
Alignment:
Q  3 agtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttgag 102  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  18981766 agtgtgctaaataaaattccaagacctatttgcgtgtgacaatttttaaattgcccaaatttttctttttgtaaatgttttaatggacttttgggttgag 18981667  T
Q  103 tctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccacacggtagaaccgcccatga 174  Q
    |||||||||||||||||||| ||||||||||| ||||||||| ||||||||| |||||||||||||||||||    
T  18981666 tctaatgtgcaaaaattatcaatcgagcccggacgaccgccc-gggtcgccatacggtagaaccgcccatga 18981596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 32127156 - 32127328
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||  ||||| ||| |    
T  32127156 atagtgtgctaaataaaattccaagatctatttgcgtgtgacaattttcagattgcctaaatttttctttttgtaaatgtgttaatgagcttttgggtcg 32127255  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccacacggtagaaccgcccatg 173  Q
    ||| ||||||||||||||||| |||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  32127256 agtttaatgtgcaaaaattattgatcgagcccgggcgaccgcccggggtcgccatacgctagaaccgcccatg 32127328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 31581637 - 31581805
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||    
T  31581637 atagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgggcttttgggatg 31581736  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccacacggtagaaccgcc 169  Q
    |||||||| |||||||| ||||| ||||||| ||||||||||||| |||||||| || |||||||||||    
T  31581737 agtctaatatgcaaaaagtatcgctcgagcctgggcgaccgcccgtggtcgccatacagtagaaccgcc 31581805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 16 - 173
Target Start/End: Original strand, 2958131 - 2958287
Alignment:
Q  16 aaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttgagtctaatgtgcaaa 115  Q
    |||||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||| ||    
T  2958131 aaattccaagacctatttgcgtgtgacaattttcagattacccaaatttttctctttgtaaatgtgttaatgggcttttgggttgagtctaatgtgc-aa 2958229  T
Q  116 aattatcgatcgagcccgggcgaccgcccggggtcgccacacggtagaaccgcccatg 173  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  2958230 aattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcccatg 2958287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 16405752 - 16405580
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||||  ||||| |||||    
T  16405752 atagtgtgctaaataaaattccaagacttatttgcgtgtgacaattttcagattgtccaaatttttctttttataaatgtgttaatgagcttttgggttg 16405653  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccacacggtagaaccgcccatg 173  Q
    ||||||| ||||||||||||||||| |||||||||||||||||| ||||| ||| | ||||||||||||||||    
T  16405652 agtctaacgtgcaaaaattatcgattgagcccgggcgaccgcccagggtcaccatatggtagaaccgcccatg 16405580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 45418735 - 45418583
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    |||||||||||||||||||||  |||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||| | ||||| |||||    
T  45418735 atagtgtgctaaataaaattcagagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttgggttg 45418636  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 153  Q
      ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  45418635 gatctaatgcgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 45418583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 5 - 147
Target Start/End: Complemental strand, 771147 - 771005
Alignment:
Q  5 tgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttgagtc 104  Q
    ||||||||||||| |||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||| |||    
T  771147 tgtgctaaataaagttccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaatgggctttttggttgggtc 771048  T
Q  105 taatgtgcaaaaattatcgatcgagcccgggcgaccgcccggg 147  Q
    |||||||||||| ||||||||||||||||||||||||||||||    
T  771047 taatgtgcaaaagttatcgatcgagcccgggcgaccgcccggg 771005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 44084618 - 44084770
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    |||||||||||||||||||||  |||||||||| ||| ||| |||||||||||||||||||||||||||||||||| |||||||||| |||||| | |||    
T  44084618 atagtgtgctaaataaaattctgagacctatttgcgtatgagaattttcagattgcccaaatttttctttttgtaagtgtgttaatgaacttttggattg 44084717  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 153  Q
     || ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  44084718 ggtttaatgtgcaaaaattatcgatcgagcccgggcgactgcccggggtcgcc 44084770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 8147504 - 8147351
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaatttt-cagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggtt 99  Q
    |||||||| ||||||||||||| ||| |||||| ||||||| |||||| |||||||||||||||||||||||||||| ||||||||| |||||||  |||    
T  8147504 atagtgtgttaaataaaattccgagatctatttgcgtgtgagaatttttcagattgcccaaatttttctttttgtaagtgtgttaattgacttttgagtt 8147405  T
Q  100 gagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 153  Q
    | |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  8147404 gggtctaatgtgcaaagattatcgatcgagcccgggcgaccgcccggggtcgcc 8147351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 2286014 - 2285845
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||||||| |||||||||| ||| |||||||||||||| ||||||| |||||    
T  2286014 atagtgtgctaaataaaattccaaaacctatttgcgtgtgacaattttcagattgctcaaatttttcctttcgtaaatgtgttaatagactttttggttg 2285915  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccacacggtagaaccgccc 170  Q
      | |||||||||||||||||||||||| || |   ||||| ||| | ||||||  ||||||||||||||    
T  2285914 gatttaatgtgcaaaaattatcgatcgaacctgaatgaccgtccgagatcgccatccggtagaaccgccc 2285845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 12756852 - 12756986
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    |||||||||||||||||||||| |||| ||||| ||||||| |||||||||||||| ||||||||||||||||||| ||||||||| | ||||| |||||    
T  12756852 atagtgtgctaaataaaattccgagacttatttgcgtgtgagaattttcagattgctcaaatttttctttttgtaagtgtgttaattggcttttgggttg 12756951  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccggg 135  Q
     |||||||| |||||||||||||||||| ||||||    
T  12756952 ggtctaatgcgcaaaaattatcgatcgaacccggg 12756986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 4 - 151
Target Start/End: Original strand, 8059351 - 8059498
Alignment:
Q  4 gtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttgagt 103  Q
    ||||||||||||||||||| ||||| ||||  |||||| |||||||| |||| |||||||||||||||||||| ||||||||| | ||||| |||||| |    
T  8059351 gtgtgctaaataaaattccgagaccgatttgtgtgtgagaattttcaaattggccaaatttttctttttgtaagtgtgttaattggcttttgggttgact 8059450  T
Q  104 ctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcg 151  Q
    |||||||||||||||||||||| ||||| |||||| || |||||||||    
T  8059451 ctaatgtgcaaaaattatcgattgagcctgggcgatcggccggggtcg 8059498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 45 - 153
Target Start/End: Complemental strand, 26238065 - 26237957
Alignment:
Q  45 ttttcagatt-gcccaaatttttctttttgtaaatgtgttaatggacttttaggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcc 143  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||||| | |||  |||||| |||||||| |||||||||||||||||||||||||    
T  26238065 ttttcagatttgcccaaatttttctttttgtaagtgtgttaatggacttttggtttgcatctaatttgcaaaaa-tatcgatcgagcccgggcgaccgcc 26237967  T
Q  144 cggggtcgcc 153  Q
    ||||||||||    
T  26237966 cggggtcgcc 26237957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 134
Target Start/End: Original strand, 26162721 - 26162847
Alignment:
Q  5 tgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttgagtc 104  Q
    ||||||||||||   ||| ||||||||||  || ||| |||||| ||||||||||||||||||||||||||| |||||||||||  |||| |||||| |     
T  26162721 tgtgctaaataa---tccgagacctatttgtgtttgagaatttttagattgcccaaatttttctttttgtaagtgtgttaatgggtttttgggttgaatt 26162817  T
Q  105 taatgtgcaaaaattatcgatcgagcccgg 134  Q
    ||||||| ||||||||||||  ||||||||    
T  26162818 taatgtgtaaaaattatcgaaggagcccgg 26162847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 27 - 129
Target Start/End: Original strand, 4555250 - 4555354
Alignment:
Q  27 cctatttacgtgtgacaattttcagatt--gcccaaatttttctttttgtaaatgtgttaatggacttttaggttgagtctaatgtgcaaaaattatcga 124  Q
    ||||||||||||||| ||||||||||||  ||||||| |||||||||||||| |||||||| |  ||||| ||||| || | ||||||||||||||||||    
T  4555250 cctatttacgtgtgagaattttcagattttgcccaaaattttctttttgtaagtgtgttaacgagcttttgggttgggtttgatgtgcaaaaattatcga 4555349  T
Q  125 tcgag 129  Q
    |||||    
T  4555350 tcgag 4555354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 27 - 144
Target Start/End: Original strand, 7072589 - 7072710
Alignment:
Q  27 cctatttacgtgtgacaattttcaga--ttgcccaaatttttctttttgtaaatgtg--ttaatggacttttaggttgagtctaatgtgcaaaaattatc 122  Q
    |||||||||||| || ||||||||||  ||| ||||  |||||||||| ||| ||||  ||||||| ||||| |||||||| ||||||  ||||||||||    
T  7072589 cctatttacgtgcgagaattttcagaatttgtccaatattttctttttataagtgtgtgttaatgggcttttgggttgagtttaatgtaaaaaaattatc 7072688  T
Q  123 gatcgagcccgggcgaccgccc 144  Q
    ||||||||||||||||||||||    
T  7072689 gatcgagcccgggcgaccgccc 7072710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 170
Target Start/End: Complemental strand, 34523270 - 34523223
Alignment:
Q  123 gatcgagcccgggcgaccgcccggggtcgccacacggtagaaccgccc 170  Q
    |||||||||||||||||||||||||||||||   ||||| ||||||||    
T  34523270 gatcgagcccgggcgaccgcccggggtcgccgggcggtaaaaccgccc 34523223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 78 - 133
Target Start/End: Complemental strand, 34906024 - 34905969
Alignment:
Q  78 tgtgttaatggacttttaggttgagtctaatgtgcaaaaattatcgatcgagcccg 133  Q
    ||||||||||| ||||| ||||  |  |||||||||||||||||||||||||||||    
T  34906024 tgtgttaatgggcttttgggttaggcttaatgtgcaaaaattatcgatcgagcccg 34905969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 153; Significance: 4e-81; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 8394277 - 8394109
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  8394277 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttccttttgtaaatgtgttaatggactttttggttg 8394178  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccacacggtagaaccgcc 169  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  8394177 agtttaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccatacggtagaaccgcc 8394109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 14777122 - 14777294
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||    
T  14777122 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgagcttttgggttg 14777221  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccacacggtagaaccgcccatg 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  14777222 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccgggatcgctacacggtagaaccgcccatg 14777294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 5555639 - 5555466
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||    
T  5555639 atagtgtgctaaataaaattccaagacctatttgtgtgtgacaattttcagattgcccaaatttttctttttgtaaatgcgttaatgggcttttgggttg 5555540  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccacacggtagaaccgcccatga 174  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  5555539 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccatacggtagaaccgcccatga 5555466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 3114111 - 3114283
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  3114111 atagtgtgctaaataaaattccaagacctatttgtgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgggcttttgggttg 3114210  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccacacggtagaaccgcccatg 173  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||||||||    
T  3114211 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgtccggggtcaccatacggtagaaccgcccatg 3114283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 36630968 - 36630800
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  36630968 atagtgtgctaactaaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttg 36630869  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccacacggtagaaccgcc 169  Q
    ||| ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  36630868 agtttaatgtgcaaaaattatcgatcgagcccgggcgaccgtccggggtcgccatacggtagaaccgcc 36630800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 5 - 153
Target Start/End: Original strand, 34389075 - 34389223
Alignment:
Q  5 tgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttgagtc 104  Q
    |||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||   ||||| ||||| |||    
T  34389075 tgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattagcttttgggttgggtc 34389174  T
Q  105 taatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 153  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  34389175 taatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 34389223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 37002159 - 37002311
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||| | |||    
T  37002159 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattgacttttggattg 37002258  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 153  Q
     |||||||||||||||||||||||||||| |||  ||||||||||||||||||    
T  37002259 ggtctaatgtgcaaaaattatcgatcgagaccgaacgaccgcccggggtcgcc 37002311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 8867746 - 8867898
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    |||||||||||||||||||||| |||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||| ||||| | ||||| | |||    
T  8867746 atagtgtgctaaataaaattccgagacctatttgcgtgtgaaaattttccgattgcccaaatttttctttttgtaaatgtattaattggcttttggattg 8867845  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 153  Q
     ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  8867846 ggtctaatatgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 8867898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 35090320 - 35090177
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    |||||||||||||||||||||| |||||||||| ||||||| |||||||||||| ||||||||||||||||||||| ||||||||| | ||||| |||||    
T  35090320 atagtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattacccaaatttttctttttgtaagtgtgttaattggcttttgggttg 35090221  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgccc 144  Q
     |||||||||||||||||||| ||||||||||||||||||||||    
T  35090220 ggtctaatgtgcaaaaattattgatcgagcccgggcgaccgccc 35090177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 26624898 - 26624749
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    |||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||  |||||| | |||    
T  26624898 atagtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattaacttttggattg 26624799  T
Q  101 agtctaatgtgcaaaaattatcg-atcgagcccgggcgaccgcccggggt 149  Q
     ||||||| |||||||||||||| ||||||||| ||||||||||||||||    
T  26624798 ggtctaatatgcaaaaattatcgaatcgagcccaggcgaccgcccggggt 26624749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 38638251 - 38638380
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    |||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||| |||||    
T  38638251 atagtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattgacttttgggttg 38638350  T
Q  101 agtctaatgtgcaaaaattatcgatcgagc 130  Q
      |||||||||||||||||||| |||||||    
T  38638351 gatctaatgtgcaaaaattatcaatcgagc 38638380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 40920018 - 40920151
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    |||||||||||||||||||||| |||||||||| | ||||| ||||||||||||| |||||||||||||||||||||||||||||| | ||||| ||||     
T  40920018 atagtgtgctaaataaaattccgagacctatttgcatgtgagaattttcagattgtccaaatttttctttttgtaaatgtgttaattggcttttgggtta 40920117  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgg 134  Q
    | ||||||||||||||||||||||||||||||||    
T  40920118 aatctaatgtgcaaaaattatcgatcgagcccgg 40920151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 33685716 - 33685564
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    ||||||||||||||||||||   |||| ||||| ||| ||| |||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||    
T  33685716 atagtgtgctaaataaaattatgagacatatttgcgtatgagaattttcagattgcccaaatttttctttttgtaagtgtgttaatgggcttttgggttg 33685617  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 153  Q
     || ||||||||||||||||||||||||||||| ||||| ||| |||||||||    
T  33685616 ggtttaatgtgcaaaaattatcgatcgagcccgagcgactgcctggggtcgcc 33685564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 43184483 - 43184628
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    |||||||||||||||||||||  |||||||||| ||||||| |||||||||||||||||||||||||||||||||| | ||||||| | ||||| ||||     
T  43184483 atagtgtgctaaataaaattcagagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtatgttaattggcttttgggtta 43184582  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccgg 146  Q
    ||||| ||| | ||||||||||||||||||||| ||||||||||||    
T  43184583 agtctgatgcgtaaaaattatcgatcgagcccgagcgaccgcccgg 43184628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 36658333 - 36658199
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    |||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||| ||||||| | | ||||||| | ||||| |||||    
T  36658333 atagtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttatttttgttagtatgttaattggcttttcggttg 36658234  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccggg 135  Q
     ||| |||||||||||||||||||||||| |||||    
T  36658233 ggtccaatgtgcaaaaattatcgatcgagtccggg 36658199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 7002877 - 7002725
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    ||||||||||||||||||||||  ||||||||| ||||||| |||||| |||||| |||||||||| ||||||||  ||||||||| | ||||| |||||    
T  7002877 atagtgtgctaaataaaattccgtgacctatttgcgtgtgagaatttttagattgtccaaatttttatttttgtatgtgtgttaattggcttttgggttg 7002778  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 153  Q
     || ||||||  ||||||  |||||||||||||||||||||| ||||||||||    
T  7002777 ggtgtaatgtagaaaaatcgtcgatcgagcccgggcgaccgctcggggtcgcc 7002725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 7048748 - 7048596
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    ||||||||||||||||||||||  ||||||||| ||||||| |||||| |||||| |||||||||| ||||||||  ||||||||| | ||||| |||||    
T  7048748 atagtgtgctaaataaaattccgtgacctatttgcgtgtgagaatttttagattgtccaaatttttatttttgtatgtgtgttaattggcttttgggttg 7048649  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 153  Q
     || ||||||  ||||||  |||||||||||||||||||||| ||||||||||    
T  7048648 ggtgtaatgtagaaaaatcgtcgatcgagcccgggcgaccgctcggggtcgcc 7048596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 94
Target Start/End: Original strand, 10868514 - 10868583
Alignment:
Q  27 cctatttacgtgtgacaattttcagatt--gcccaaatttttctttttgtaaatgtgttaatggactttt 94  Q
    ||||||| || |||| ||||||||||||  |||||||||||||||||||||||||||||||||| |||||    
T  10868514 cctatttgcgcgtgagaattttcagattttgcccaaatttttctttttgtaaatgtgttaatgggctttt 10868583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 78 - 166
Target Start/End: Complemental strand, 26502885 - 26502797
Alignment:
Q  78 tgtgttaatggacttttaggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccacacggtagaacc 166  Q
    ||||||||||| ||||| ||||| |  |||| ||||||||   ||||||||||||||||||| ||| |||||||||||||||| |||||    
T  26502885 tgtgttaatgggcttttgggttgggcttaatatgcaaaaaaattcgatcgagcccgggcgactgcctggggtcgccacacggtggaacc 26502797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 78 - 166
Target Start/End: Original strand, 26589829 - 26589917
Alignment:
Q  78 tgtgttaatggacttttaggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccacacggtagaacc 166  Q
    ||||||||||| ||||| ||||| |  |||| ||||||||   ||||||||||||||||||| ||| |||||||||||||||| |||||    
T  26589829 tgtgttaatgggcttttgggttgggcttaatatgcaaaaaaattcgatcgagcccgggcgactgcctggggtcgccacacggtggaacc 26589917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 153
Target Start/End: Original strand, 10876829 - 10876874
Alignment:
Q  108 tgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 153  Q
    ||||||||||||||||||||||||||||||||| | |||| |||||    
T  10876829 tgtgcaaaaattatcgatcgagcccgggcgaccacacgggttcgcc 10876874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 150; Significance: 2e-79; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 20129462 - 20129289
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  20129462 atagtgtgccaaataaaattctaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgggcttttgggttg 20129363  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccacacggtagaaccgcccatga 174  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  20129362 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgctacacggtggaaccgcccatga 20129289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 25930860 - 25930687
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  25930860 atagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcaaattgcccaaatttttctttttgtaaatgtgttaatgggcttttgggttg 25930761  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccacacggtagaaccgcccatga 174  Q
    ||| ||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  25930760 agtttaatgtgcaaaaattatagatcgagcccgggcgaccgcccagggtcgccatacggtagaaccgcccatga 25930687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 26439294 - 26439467
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    ||||||||  |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| |||||    
T  26439294 atagtgtgtcaaataaaatttcaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttataaatgtgttaatgggcttttgggttg 26439393  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccacacggtagaaccgcccatga 174  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  26439394 agtctaatgtgcaaaaattatcgaccgagcccgggcgaccgcccggggtcgctacacggtggaaccgcccatga 26439467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 13012340 - 13012168
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||  ||||| |||||    
T  13012340 atagtgtgccaaataaaattccaagacctatttacgtgtgacaattttcaaattgcccaaatttttctttttataaatgtgttaatgagctttttggttg 13012241  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccacacggtagaaccgcccatg 173  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  13012240 aatctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgctacacggtggaaccgcccatg 13012168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 34407299 - 34407471
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    ||||||||  |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| |||||    
T  34407299 atagtgtgtcaaataaaatttcaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttataaatgtgttaatgggcttttgggttg 34407398  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccacacggtagaaccgcccatg 173  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  34407399 agtctaatgtgcaaaaattatcgaccgagcccgggcgaccgcccggggtcgctacacggtggaaccgcccatg 34407471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 36382361 - 36382528
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| |||||    
T  36382361 atagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgtccaaatttttctttt-gtaaatgtgttaatggactttttggttg 36382459  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccacacggtagaaccgcc 169  Q
    ||| ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  36382460 agtttaatgtgcaaaaattatggatcgagcccgggcgaccgcccggggtcgccatacggtagaaccgcc 36382528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 47500925 - 47500753
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||  ||||| |||||    
T  47500925 atagtgtgccaaataaaattccaagacctatttacgtgtgacaattttcaaattgcccaaatttttcttttcataaatgtgttaatgagctttttggttg 47500826  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccacacggtagaaccgcccatg 173  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  47500825 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgctacacggtggaaccgcccatg 47500753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 43356056 - 43355884
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    ||||||||  |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| |||||    
T  43356056 atagtgtgtcaaataaaatttcaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttataaatgtgttaatgggcttttgggttg 43355957  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccacacggtagaaccgcccatg 173  Q
    |||||||||||||||||||||||| |||||||||||||| ||| |||||||| ||||||| ||||||||||||    
T  43355956 agtctaatgtgcaaaaattatcgaccgagcccgggcgactgcctggggtcgctacacggtggaaccgcccatg 43355884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 29319720 - 29319892
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    ||||||||||||||||||||||||||| |||||  ||||||||||||||||||||| |||||||||||||||||||||||||||||||  |||| |||||    
T  29319720 atagtgtgctaaataaaattccaagacttatttgtgtgtgacaattttcagattgctcaaatttttctttttgtaaatgtgttaatgggattttgggttg 29319819  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccacacggtagaaccgcccatg 173  Q
    ||||||||||||||||||||||||||||||| || |||||||| |||||| ||| ||||||||||||||||||    
T  29319820 agtctaatgtgcaaaaattatcgatcgagcctggacgaccgccaggggtcaccatacggtagaaccgcccatg 29319892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 4 - 173
Target Start/End: Original strand, 43143602 - 43143771
Alignment:
Q  4 gtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttgagt 103  Q
    ||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||| | ||||| ||||||||    
T  43143602 gtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttgggttgagt 43143701  T
Q  104 ctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccacacggtagaaccgcccatg 173  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |  |||||  |||||||||||    
T  43143702 ctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgtcggacggtgaaaccgcccatg 43143771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 4 - 170
Target Start/End: Original strand, 10352902 - 10353068
Alignment:
Q  4 gtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttgagt 103  Q
    ||||||||||||||||||| |||||||||| ||||| | ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||    
T  10352902 gtgtgctaaataaaattccgagacctatttgcgtgtaagaattttcagattgcccaaatttttccttttgtaaatgtgttaatggactttttggttgggt 10353001  T
Q  104 ctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccacacggtagaaccgccc 170  Q
    |||||||||||||||||||||| ||||||||||||||||| |||||||||  |||||  ||||||||    
T  10353002 ctaatgtgcaaaaattatcgattgagcccgggcgaccgccaggggtcgccggacggtgaaaccgccc 10353068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 5 - 170
Target Start/End: Original strand, 17511252 - 17511417
Alignment:
Q  5 tgtgctaaataaaatt-ccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttgagt 103  Q
    |||||||||||||||| ||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  17511252 tgtgctaaataaaatttccaagacctatttgcgtgtaacaattttcaaattgcccaaatttttctttttgtaaatgtgttaatgggcttttgggttgagt 17511351  T
Q  104 ctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccacacggtagaaccgccc 170  Q
    |||||||||||||||||||||||||| | ||||||||| || ||||||||| |||||||||||||||    
T  17511352 ctaatgtgcaaaaattatcgatcgagtctgggcgaccg-ccagggtcgccatacggtagaaccgccc 17511417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 3292911 - 3293060
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    |||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||| | ||||| |||||    
T  3292911 atagtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttgggttg 3293010  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtc 150  Q
     |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  3293011 ggtctaatgggcaaaaattatcgatcgagcccgggcgaccgcccggggtc 3293060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 40529167 - 40528996
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||||| |||| |||||||||||||||||||||||||||||||   ||||||||||    
T  40529167 atagtgtgctaaataaaattccaagacctatttgcatgtgacaattttcaaattgtccaaatttttctttttgtaaatgtgttaatgagtttttaggttg 40529068  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgac--cgcccggggtcgccacacggtagaaccgccc 170  Q
    ||| ||||||||||||||||||||||||| |||| ||||  ||||| ||||||||| |||||||||||||||    
T  40529067 agtttaatgtgcaaaaattatcgatcgagtccggacgacctcgcccagggtcgccatacggtagaaccgccc 40528996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 6690250 - 6690402
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    |||||||||||||||||||| | |||||||||| ||||||| ||||||||| |||||||||||||||||||||||| ||||||||| | ||||| |||||    
T  6690250 atagtgtgctaaataaaatttcgagacctatttgcgtgtgagaattttcagtttgcccaaatttttctttttgtaagtgtgttaattggcttttgggttg 6690349  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 153  Q
     |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  6690350 ggtctaatgcgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 6690402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 30216757 - 30216909
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    |||||||||||||||||||||| ||| |||||| | ||||| |||||||||||||||||||||||||||||||||| |||||||||   ||||| |||||    
T  30216757 atagtgtgctaaataaaattccgagatctatttgcatgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattagcttttgggttg 30216856  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 153  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30216857 ggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 30216909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 4 - 152
Target Start/End: Original strand, 42333794 - 42333942
Alignment:
Q  4 gtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttgagt 103  Q
    ||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||| | ||||| ||||||||    
T  42333794 gtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttgggttgagt 42333893  T
Q  104 ctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgc 152  Q
    |||||||||||||||||||||| |||||||| |||||||||||| ||||    
T  42333894 ctaatgtgcaaaaattatcgattgagcccggacgaccgcccgggatcgc 42333942  T

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Target: chr4; HSP #18
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 50205092 - 50205261
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| |||| ||||||||||||||| ||||||||| | ||||| |||||    
T  50205092 atagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgtccaattttttctttttgtaagtgtgttaattggcttttgggttg 50205191  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccacacggtagaaccgccc 170  Q
      |||||||||||||||||||||||||||| |||||||||||||||| |||||  |||||  ||||||||    
T  50205192 gatctaatgtgcaaaaattatcgatcgagctcgggcgaccgcccgggatcgccggacggtgaaaccgccc 50205261  T

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Target: chr4; HSP #19
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 2 - 152
Target Start/End: Original strand, 30077647 - 30077797
Alignment:
Q  2 tagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttga 101  Q
    ||||||||||||||||||| ||||||||||||  |||| | ||||||||||||| ||||||||||||||||||||||||||||||| |||||| |||||     
T  30077647 tagtgtgctaaataaaatttcaagacctatttgtgtgtaaaaattttcagattgtccaaatttttctttttgtaaatgtgttaatgaactttttggttgg 30077746  T
Q  102 gtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgc 152  Q
    ||||||||||||||| |||||||| ||||| ||||||||||||| ||||||    
T  30077747 gtctaatgtgcaaaatttatcgattgagcctgggcgaccgcccgaggtcgc 30077797  T

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Target: chr4; HSP #20
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 48989480 - 48989330
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    |||||||||||||||||||||| |||||||||| ||| ||| |||||||||||||||||||||||||||||||||| |||||||||||||||||  ||||    
T  48989480 atagtgtgctaaataaaattccgagacctatttgcgtatgagaattttcagattgcccaaatttttctttttgtaagtgtgttaatggacttttgagttg 48989381  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcg 151  Q
     || |||||||||||||||||||||||| |||||  |||||||||| ||||    
T  48989380 ggtttaatgtgcaaaaattatcgatcgaacccggttgaccgcccggagtcg 48989330  T

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Target: chr4; HSP #21
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 29995998 - 29996144
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    |||||||||| ||||||||||| ||| |||||| ||||  | ||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  29995998 atagtgtgcttaataaaattccgagaactatttgcgtgcaagaattttcagattgcccaaatttttcttttcgtaaatgtgttaatggactttttggttg 29996097  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggg 147  Q
    |||||||||| |||||||||||||||||| |||| |||||| |||||    
T  29996098 agtctaatgtacaaaaattatcgatcgagtccggacgaccgtccggg 29996144  T

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Target: chr4; HSP #22
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 6235672 - 6235515
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |        
T  6235672 atagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcaaattgcccaaatttttctttttgtaaatgtgttaatggacttttgg---- 6235577  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccacacggtagaaccgccc 170  Q
            ||||||||||||||| ||||||||| |||||||||| |  |||||| |||||||||||||||    
T  6235576 --------gtgcaaaaattatcggtcgagcccgagcgaccgcccagaatcgccatacggtagaaccgccc 6235515  T

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Target: chr4; HSP #23
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 28877265 - 28877414
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    |||||||||||||||||||||| |||||||||| ||||||| |||||| ||||| ||||||||||||||||| |||  ||||||||   |||||||||||    
T  28877265 atagtgtgctaaataaaattccgagacctatttgcgtgtgagaatttttagatttcccaaatttttctttttataagcgtgttaattagcttttaggttg 28877364  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtc 150  Q
    | |||||||||||||||||||||||| |||||  |||||||| |||||||    
T  28877365 aatctaatgtgcaaaaattatcgatctagcccaagcgaccgcacggggtc 28877414  T

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Target: chr4; HSP #24
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 44156803 - 44156668
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    |||||||||||||||||||||| |||||||||| |||| || ||||||||||||| ||||| |||||||||||||| ||||||||| | ||||| |||||    
T  44156803 atagtgtgctaaataaaattccgagacctatttgcgtgagagaattttcagattgtccaaaattttctttttgtaagtgtgttaattggcttttgggttg 44156704  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggc 136  Q
     |||||||||||||||||||||| | ||||||||||    
T  44156703 ggtctaatgtgcaaaaattatcggttgagcccgggc 44156668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 26448204 - 26448053
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    |||||||||||||||||||||| | ||||||||  || ||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||     
T  26448204 atagtgtgctaaataaaattccgaaacctatttgtgtatgagaattttcagattgcccaaattttt-tttttgtaagtgtgttaatggacttttgggtta 26448106  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 153  Q
      | ||||||||||||||||||||||||| |||| ||| ||| ||| ||||||    
T  26448105 gatttaatgtgcaaaaattatcgatcgagtccggacgatcgcacggagtcgcc 26448053  T

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Target: chr4; HSP #26
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 35546105 - 35545977
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    |||||||||||||||||||||  ||||| |||| ||||||| ||||||||||||||||||| |||||||||||||| ||||||||| | ||||| |||||    
T  35546105 atagtgtgctaaataaaattcagagacccatttgcgtgtgagaattttcagattgcccaaaattttctttttgtaagtgtgttaattggcttttgggttg 35546006  T
Q  101 agtctaatgtgcaaaaattatcgatcgag 129  Q
     |||| ||| ||||||||| |||||||||    
T  35546005 ggtctgatgcgcaaaaattgtcgatcgag 35545977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 1817869 - 1817752
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    |||||||| ||||||||||||| |||||||||| ||||| | |||||| ||||||||||||||||||||||| ||||||| ||||||||||||| | |||    
T  1817869 atagtgtgttaaataaaattccgagacctatttgcgtgtaagaatttttagattgcccaaatttttctttttataaatgtattaatggacttttggattg 1817770  T
Q  101 agtctaatgtgcaaaaat 118  Q
      ||||||||||||||||    
T  1817769 gatctaatgtgcaaaaat 1817752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 30110084 - 30109958
Alignment:
Q  27 cctatttacgtgtgacaattttcagatt--gcccaaatttttctttttgtaaatgtgttaatggacttttaggttgagtctaatgtgcaaaaattatcga 124  Q
    ||||||| ||||||| | |||||| |||  | |||||||||||||||||||| ||||||||||| ||||  | ||| |||||||||||||||||||||||    
T  30110084 cctatttgcgtgtgagatttttcatattttgtccaaatttttctttttgtaagtgtgttaatggtctttgggtttgggtctaatgtgcaaaaattatcga 30109985  T
Q  125 tcgagcccgggcgaccgcccggggtcg 151  Q
    ||||| ||||||||||| |||||||||    
T  30109984 tcgagtccgggcgaccgtccggggtcg 30109958  T

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Target: chr4; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 56 - 141
Target Start/End: Complemental strand, 48130063 - 48129978
Alignment:
Q  56 cccaaatttttctttttgtaaatgtgttaatggacttttaggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccg 141  Q
    ||||||||||||||||||||| ||||||||||  ||||| ||||| ||||||| ||||||||||||||||||||||||| ||||||    
T  48130063 cccaaatttttctttttgtaagtgtgttaatgagcttttgggttgggtctaatatgcaaaaattatcgatcgagcccggtcgaccg 48129978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 13392896 - 13392970
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgta 75  Q
    |||||||||||||||||||| | |||||||||| ||||||| |||||| ||||||||||||||||||||||||||    
T  13392896 atagtgtgctaaataaaatttcgagacctatttgcgtgtgagaatttttagattgcccaaatttttctttttgta 13392970  T

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Target: chr4; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 13396035 - 13396109
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgta 75  Q
    |||||||||||||||||||| | |||||||||| ||||||| |||||| ||||||||||||||||||||||||||    
T  13396035 atagtgtgctaaataaaatttcgagacctatttgcgtgtgagaatttttagattgcccaaatttttctttttgta 13396109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 68 - 170
Target Start/End: Complemental strand, 27363446 - 27363344
Alignment:
Q  68 tttttgtaaatgtgttaatggacttttaggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccacacggtagaaccg 167  Q
    ||||||||| ||||||||||| ||||| ||||| | ||||| ||||||||   ||||||||||||||||||||||||| |||||||| |||||| |||||    
T  27363446 tttttgtaagtgtgttaatgggcttttgggttgggcctaatatgcaaaaaaattcgatcgagcccgggcgaccgcccgaggtcgccatacggtaaaaccg 27363347  T
Q  168 ccc 170  Q
    |||    
T  27363346 ccc 27363344  T

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Target: chr4; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 53 - 151
Target Start/End: Complemental strand, 45194276 - 45194178
Alignment:
Q  53 ttgcccaaatttttctttttgtaaatgtgttaatggacttttaggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcg 151  Q
    ||||||||  |||| ||||||||| ||||||||||||||||| |||||||| ||||||||||||||||| ||||||| |||||| | |||| |||||||    
T  45194276 ttgcccaatattttttttttgtaagtgtgttaatggacttttgggttgagtttaatgtgcaaaaattattgatcgagtccgggcaatcgcctggggtcg 45194178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 112 - 173
Target Start/End: Complemental strand, 7769369 - 7769308
Alignment:
Q  112 caaaaattatcgatcgagcccgggcgaccgcccggggtcgccacacggtagaaccgcccatg 173  Q
    |||||||||||||||||||||||||||||||| |||||||||  |||||  |||||||||||    
T  7769369 caaaaattatcgatcgagcccgggcgaccgcctggggtcgccggacggtgaaaccgcccatg 7769308  T

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Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 153
Target Start/End: Original strand, 49908782 - 49908819
Alignment:
Q  116 aattatcgatcgagcccgggcgaccgcccggggtcgcc 153  Q
    ||||||||||||||||||||||||||||||||||||||    
T  49908782 aattatcgatcgagcccgggcgaccgcccggggtcgcc 49908819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 60 - 128
Target Start/End: Complemental strand, 6254637 - 6254569
Alignment:
Q  60 aatttttctttttgtaaatgtgttaatggacttttaggttgagtctaatgtgcaaaaattatcgatcga 128  Q
    ||||||| |||||| || ||||||||| | ||||| ||||| || ||||||||||||||||||||||||    
T  6254637 aatttttttttttgcaagtgtgttaattgtcttttgggttgggtttaatgtgcaaaaattatcgatcga 6254569  T

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Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 116 - 153
Target Start/End: Original strand, 5517494 - 5517531
Alignment:
Q  116 aattatcgatcgagcccgggcgaccgcccggggtcgcc 153  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  5517494 aattatcgatcgagcccaggcgaccgcccggggtcgcc 5517531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 151
Target Start/End: Complemental strand, 17555032 - 17554998
Alignment:
Q  117 attatcgatcgagcccgggcgaccgcccggggtcg 151  Q
    |||||||||||||||||||||||| ||||||||||    
T  17555032 attatcgatcgagcccgggcgaccacccggggtcg 17554998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 170
Target Start/End: Original strand, 6212029 - 6212082
Alignment:
Q  117 attatcgatcgagcccgggcgaccgcccggggtcgccacacggtagaaccgccc 170  Q
    |||||||||||||| |||||||||||||| |||||||  |||||  ||||||||    
T  6212029 attatcgatcgagctcgggcgaccgcccgaggtcgccggacggtgaaaccgccc 6212082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 152
Target Start/End: Original strand, 13392976 - 13393036
Alignment:
Q  92 tttaggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgc 152  Q
    |||||||||  | |||| ||||||| | |||||| ||||||||||||||| ||||||||||    
T  13392976 tttaggttggatgtaatatgcaaaagtcatcgattgagcccgggcgaccgtccggggtcgc 13393036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 152
Target Start/End: Original strand, 13396115 - 13396175
Alignment:
Q  92 tttaggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgc 152  Q
    |||||||||  | |||| ||||||| | |||||| ||||||||||||||| ||||||||||    
T  13396115 tttaggttggatgtaatatgcaaaagtcatcgattgagcccgggcgaccgtccggggtcgc 13396175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 149; Significance: 1e-78; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 36293636 - 36293808
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  36293636 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgggcttttgggttg 36293735  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccacacggtagaaccgcccatg 173  Q
    |||||||||| |||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||    
T  36293736 agtctaatgtacaaaaattatcgatcgagtccggacgaccgctcggggtcgccacacggtagaaccgcccatg 36293808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 10034079 - 10033910
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  10034079 atagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgggcttttgggttg 10033980  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccacacggtagaaccgccc 170  Q
    |||||||||||||||||||||||||||||||||||||| || |||||||||||| |||||||||||||||    
T  10033979 agtctaatgtgcaaaaattatcgatcgagcccgggcgatcgtccggggtcgccatacggtagaaccgccc 10033910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 13818129 - 13817960
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  13818129 atagtgtgctaaataaatttccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgggcttttgggttg 13818030  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccacacggtagaaccgccc 170  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  13818029 agtctaatgtgcaaaaattatcgatcgagcccgagcgaccgcccggggtcgccatacggtagaaccgccc 13817960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 39434848 - 39434675
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||    
T  39434848 atagtgtgctaaataaaattcaaagacctatttacatgtgacaattttcagattgcccaaatttttcattttgtaaatgtgttaatgggcttttgggttg 39434749  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccacacggtagaaccgcccatga 174  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  39434748 agtctaatgtgaaaaaattatcgatcgagcccgggcgaccgcccagggtcgccacacggtagaaccgcccatga 39434675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 26283333 - 26283505
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| |||||    
T  26283333 atagtgtgccaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttataaatgtgttaatgaactttttggttg 26283432  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccacacggtagaaccgcccatg 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||    
T  26283433 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccgaggtcgctacacggtggaaccgcccatg 26283505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 1776391 - 1776559
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  1776391 atagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcaaattgcccaaatttttctttttgtaaatgtgttaatggactttttggttg 1776490  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccacacggtagaaccgcc 169  Q
    | | |||||| |||||||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  1776491 actttaatgtacaaaaattatcgatcgagcccgggcgaccgcccggggtcgtcatacggtagaaccgcc 1776559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 2 - 173
Target Start/End: Original strand, 3155647 - 3155818
Alignment:
Q  2 tagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttga 101  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  3155647 tagtgtgctaaataaaattccaagatctatttgcgtgtgacaattttcagattgtccaaatttttctttttataaatgtgttaatggacttttaggttga 3155746  T
Q  102 gtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccacacggtagaaccgcccatg 173  Q
    ||| |||||||||||||||| ||||||||||| ||||||||||||| |||||| ||| ||||||||||||||    
T  3155747 gtcgaatgtgcaaaaattattgatcgagcccgagcgaccgcccgggatcgccatacgatagaaccgcccatg 3155818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 39657521 - 39657693
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||    
T  39657521 atagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgagcttttgggttg 39657620  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccacacggtagaaccgcccatg 173  Q
    |||||||||||||||||||||| ||||||||||  |||||| | |||||||||| |  |||||||||||||||    
T  39657621 agtctaatgtgcaaaaattatcaatcgagcccgaacgaccgtctggggtcgccatatagtagaaccgcccatg 39657693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 16155149 - 16155015
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||| |||||    
T  16155149 atagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcctaaatttttctttttataaatgtgttaatgggcttttgggttg 16155050  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccggg 135  Q
    |||||||||||||||||||||||||||||||||||    
T  16155049 agtctaatgtgcaaaaattatcgatcgagcccggg 16155015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 17332566 - 17332718
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    |||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||| | ||||| |||||    
T  17332566 atagtgtgctaaataaaattccgagacctatttgcgtgtgaaaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttgggttg 17332665  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 153  Q
     ||||||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  17332666 ggtctaatatgcaaaaattatcgatcgagcccgggcgaacgcccggggtcgcc 17332718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 5 - 173
Target Start/End: Complemental strand, 37254789 - 37254621
Alignment:
Q  5 tgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttgagtc 104  Q
    |||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||| |||    
T  37254789 tgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattgacttttgggttgggtc 37254690  T
Q  105 taatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccacacggtagaaccgcccatg 173  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||   ||||  |||||||||||    
T  37254689 taatgtgcaaaaattatcgatcgagcctgggcgaccgcctggggtcgccgagcggtgaaaccgcccatg 37254621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 12278875 - 12279027
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    |||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||| | | ||| |||||    
T  12278875 atagtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcctttgggttg 12278974  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 153  Q
     |||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  12278975 ggtctaatgtgcaaaaattatcgatcgagtccgggcgaccgcccgggatcgcc 12279027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 31680519 - 31680367
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    |||||||||||||||||||||| |||||||||| | ||||| |||||||||||||||||||||||||||||||||| ||||||||| | ||||| |||||    
T  31680519 atagtgtgctaaataaaattccgagacctatttgcatgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttgggttg 31680420  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 153  Q
     |||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  31680419 ggtctaatgcggaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 31680367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 16333891 - 16334013
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  16333891 atagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgggcttttgggttg 16333990  T
Q  101 agtctaatgtgcaaaaattatcg 123  Q
    | |||||||||||||||||||||    
T  16333991 aatctaatgtgcaaaaattatcg 16334013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 19986091 - 19985926
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    |||||||| ||||||||||| |||||||||||| ||||||| |||||| ||||| |||||||||||||||||||||||||| |||||||||||| |||||    
T  19986091 atagtgtgttaaataaaatttcaagacctatttgcgtgtgataatttttagattacccaaatttttctttttgtaaatgtgctaatggacttttgggttg 19985992  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccacacggtagaacc 166  Q
    | |||||||||||||||||||||||||||| ||| |||||||||| ||||| || |||||| ||||    
T  19985991 aatctaatgtgcaaaaattatcgatcgagctcggacgaccgcccgaggtcgtcatacggtaaaacc 19985926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 31501731 - 31501883
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    |||||||||||||||||||| | |||||||||| |||| || |||||||||||||||||||||||||||||||||| ||||||||| | ||||| |||||    
T  31501731 atagtgtgctaaataaaatttcgagacctatttgcgtgcgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttgggttg 31501830  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 153  Q
     ||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  31501831 ggtctaatgtgcaaaaattatcgatcgagcccgggcaatcgcccggggtcgcc 31501883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 33430473 - 33430335
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    |||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||| | ||||| |||||    
T  33430473 atagtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttgggttg 33430374  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgac 139  Q
     |||||||| |||||||||||||||||||||||||||||    
T  33430373 ggtctaatgcgcaaaaattatcgatcgagcccgggcgac 33430335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 43069029 - 43068896
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    |||||||||||||||||||||| |||| ||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  43069029 atagtgtgctaaataaaattccgagacttatttacatgtaagaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttgggttg 43068930  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgg 134  Q
     |||||||||| ||||||||| ||||||||||||    
T  43068929 ggtctaatgtgaaaaaattattgatcgagcccgg 43068896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 36291523 - 36291373
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    |||||||| ||||||||||||  ||||||||||  |||| | |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||     
T  36291523 atagtgtgttaaataaaattctgagacctatttgtgtgtaataattttgagattgcccaaatttttctttttgtaaatgtgttaatgaacttttaggtta 36291424  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcg 151  Q
      ||||||||||||||||||| |||||| ||||| ||||||||||| ||||    
T  36291423 gatctaatgtgcaaaaattattgatcgaacccggacgaccgcccggagtcg 36291373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 27 - 140
Target Start/End: Complemental strand, 28801415 - 28801300
Alignment:
Q  27 cctatttacgtgtgacaattttcagattg--cccaaatttttctttttgtaaatgtgttaatggacttttaggttgagtctaatgtgcaaaaattatcga 124  Q
    ||||||| ||||||| |||||||| |||   ||||||||||||||||||||| ||||||||||| ||||| | |||  ||||||||||||||||||||||    
T  28801415 cctatttgcgtgtgagaattttcatatttttcccaaatttttctttttgtaagtgtgttaatgggcttttggtttggatctaatgtgcaaaaattatcga 28801316  T
Q  125 tcgagcccgggcgacc 140  Q
    ||||||| ||||||||    
T  28801315 tcgagccagggcgacc 28801300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 117 - 170
Target Start/End: Complemental strand, 14316694 - 14316641
Alignment:
Q  117 attatcgatcgagcccgggcgaccgcccggggtcgccacacggtagaaccgccc 170  Q
    ||||||||||||||| ||||||||||||| | |||||| |||||||||||||||    
T  14316694 attatcgatcgagcctgggcgaccgcccgagatcgccatacggtagaaccgccc 14316641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 170
Target Start/End: Original strand, 26543902 - 26543949
Alignment:
Q  123 gatcgagcccgggcgaccgcccggggtcgccacacggtagaaccgccc 170  Q
    |||||||||||||||||||||||||||||||   ||||| ||||||||    
T  26543902 gatcgagcccgggcgaccgcccggggtcgccgggcggtaaaaccgccc 26543949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 140
Target Start/End: Complemental strand, 202688 - 202652
Alignment:
Q  104 ctaatgtgcaaaaattatcgatcgagcccgggcgacc 140  Q
    ||||||| || ||||||||||||||||||||||||||    
T  202688 ctaatgtacacaaattatcgatcgagcccgggcgacc 202652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 145; Significance: 2e-76; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 17994 - 17822
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  17994 atagtgtgctaaataaaatttcaagacctatttacatgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgggcttttgggttg 17895  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccacacggtagaaccgcccatg 173  Q
    |||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||||||||    
T  17894 agtctaatgtgcaaaaattatcgatcgagcccggacgatcgctcggggtcgccacacggtagaaccgcccatg 17822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 141; Significance: 6e-74; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 480472 - 480644
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||  ||||| |||||    
T  480472 atagtgtgccaaataaaattccaagacctatttacgtgtgacaattttcaaattgcccaaatttttctttttataaatgtgttaatgagctttttggttg 480571  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccacacggtagaaccgcccatg 173  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  480572 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgctacacggtggaaccgcccatg 480644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 141; Significance: 6e-74; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 398769 - 398597
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||  ||||| |||||    
T  398769 atagtgtgccaaataaaattccaagacctatttacgtgtgacaattttcaaattgcccaaatttttctttttataaatgtgttaatgagctttttggttg 398670  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccacacggtagaaccgcccatg 173  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  398669 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgctacacggtggaaccgcccatg 398597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 34948773 - 34948945
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    |||||||||||||||||||| ||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  34948773 atagtgtgctaaataaaatttcaagatctatttgtgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgggcttttgggttg 34948872  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccacacggtagaaccgcccatg 173  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||    
T  34948873 agtctaatgtgcaaaaattatcgatcgagcctgggcgaccgcctggggtcgccatacggtagaaccgcccatg 34948945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 13837973 - 13837798
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||  ||||| |||||    
T  13837973 atagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttgatgtgcttttgggttg 13837874  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccacacggtagaaccgcccatgaga 176  Q
    |||||||||| ||||||||||||||||| |||| |||| ||||||||||||||| |||||||||||||||||||||    
T  13837873 agtctaatgtacaaaaattatcgatcgaacccgagcgatcgcccggggtcgccatacggtagaaccgcccatgaga 13837798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 28996882 - 28996730
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    |||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  28996882 atagtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattgacttttaggttg 28996783  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 153  Q
     |||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  28996782 ggtctaatgcgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgcc 28996730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 18339258 - 18339106
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    |||||||||||||||||||||| |||||||||| | ||||| ||||||||||||||||||| |||||||||||||| ||||||||| | ||||||| |||    
T  18339258 atagtgtgctaaataaaattccgagacctatttgcatgtgagaattttcagattgcccaaaattttctttttgtaagtgtgttaattggcttttagattg 18339159  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 153  Q
     |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  18339158 ggtctaatgtgcaaaaattattgatcgagcccgggcgaccgcccggggtcgcc 18339106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 2 - 147
Target Start/End: Complemental strand, 29743434 - 29743289
Alignment:
Q  2 tagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttga 101  Q
    ||||||||||||||||||||| |||||||||| ||||| | |||||||||||||||||||||||||||| |||||||||||||||| |||||| |||||     
T  29743434 tagtgtgctaaataaaattccgagacctatttgcgtgtaagaattttcagattgcccaaatttttctttctgtaaatgtgttaatgaactttttggttgg 29743335  T
Q  102 gtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggg 147  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||    
T  29743334 gtctaatgtgcaaaaattatcgattgagcccgggcaaccgcccggg 29743289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 33229351 - 33229487
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    ||||||||||||||||||| || |||| ||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  33229351 atagtgtgctaaataaaatcccgagacttatttacgtgtaagaattttcagattgcccaaatttttctttttggaaatgtgttaatggacttttgggttg 33229450  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcg 137  Q
     ||||||||| ||||||| ||||||||||||||||||    
T  33229451 ggtctaatgtacaaaaatgatcgatcgagcccgggcg 33229487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 57 - 153
Target Start/End: Original strand, 31028435 - 31028531
Alignment:
Q  57 ccaaatttttctttttgtaaatgtgttaatggacttttaggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 153  Q
    ||||| ||| |||||||||||||||||||||  |||||||||||  ||||||||||||||||||||||||||| |||||| ||||| ||||||||||    
T  31028435 ccaaaatttcctttttgtaaatgtgttaatgagcttttaggttggatctaatgtgcaaaaattatcgatcgagtccgggcaaccgctcggggtcgcc 31028531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 68 - 153
Target Start/End: Original strand, 24697899 - 24697984
Alignment:
Q  68 tttttgtaaatgtgttaatggacttttaggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 153  Q
    ||||||||| ||||||||||| ||||| ||||| | |||||||| ||||||||||||| ||||||||||||  | |||||||||||    
T  24697899 tttttgtaagtgtgttaatgggcttttgggttgggcctaatgtgaaaaaattatcgattgagcccgggcgagtgtccggggtcgcc 24697984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 117 - 153
Target Start/End: Complemental strand, 13647053 - 13647017
Alignment:
Q  117 attatcgatcgagcccgggcgaccgcccggggtcgcc 153  Q
    |||||||||||||||||||||||||||||||||||||    
T  13647053 attatcgatcgagcccgggcgaccgcccggggtcgcc 13647017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 138
Target Start/End: Complemental strand, 24695572 - 24695502
Alignment:
Q  68 tttttgtaaatgtgttaatggacttttaggttgagtctaatgtgcaaaaattatcgatcgagcccgggcga 138  Q
    ||||||||| ||||||||||| ||||| ||||||| |||||||  |||||| ||||||  |||| ||||||    
T  24695572 tttttgtaagtgtgttaatgggcttttgggttgagcctaatgttaaaaaatgatcgatttagcctgggcga 24695502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 138
Target Start/End: Complemental strand, 3050154 - 3050094
Alignment:
Q  78 tgtgttaatggacttttaggttgagtctaatgtgcaaaaattatcgatcgagcccgggcga 138  Q
    ||||||||||| ||||| ||||| |   |||||||||||||||| ||| ||||||||||||    
T  3050154 tgtgttaatgggcttttcggttgcgctcaatgtgcaaaaattattgattgagcccgggcga 3050094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 153
Target Start/End: Original strand, 34385519 - 34385555
Alignment:
Q  117 attatcgatcgagcccgggcgaccgcccggggtcgcc 153  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  34385519 attatcgatcgagccagggcaaccgcccggggtcgcc 34385555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 141; Significance: 6e-74; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 26144407 - 26144235
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||  ||||| |||||    
T  26144407 atagtgtgccaaataaaattccaagacctatttacgtgtgacaattttcaaattgcccaaatttttctttttataaatgtgttaatgagctttttggttg 26144308  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccacacggtagaaccgcccatg 173  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  26144307 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgctacacggtggaaccgcccatg 26144235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 7433597 - 7433425
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    |||||||||||||||||||| ||||||||||||  ||||||||||||| |||||||||||| |||||||||||||||||||||||||| ||||| |||||    
T  7433597 atagtgtgctaaataaaatttcaagacctatttgtgtgtgacaatttttagattgcccaaaattttctttttgtaaatgtgttaatgggcttttgggttg 7433498  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccacacggtagaaccgcccatg 173  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||| |||| ||||||||||||||||||    
T  7433497 agtctaatgtgcaaaaattatagatcgagctcgggcgaccgcccggggttgccatacggtagaaccgcccatg 7433425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 32982071 - 32982236
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    |||| ||||||||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||    
T  32982071 atagagtgctaaataaaattccaagacctatttgtgtgtgacaattttcagattgtccaaatttttctttttgtaaatatgttaatgggcttttaggttg 32982170  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccacacggtagaacc 166  Q
     |||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||    
T  32982171 ggtctaatgtgcaaaaattatcgatcgggcccgcgcgaccgcccggggtcgccatacggtagaacc 32982236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 9 - 170
Target Start/End: Original strand, 42310964 - 42311125
Alignment:
Q  9 ctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttgagtctaat 108  Q
    |||||||||||| |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||||    
T  42310964 ctaaataaaatttcaagacttatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaacgggcttttgggttgagtctaat 42311063  T
Q  109 gtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccacacggtagaaccgccc 170  Q
    |||||||||||||||||||||||||||||| || | |||||||||| |||||||||||||||    
T  42311064 gtgcaaaaattatcgatcgagcccgggcgatcgtctggggtcgccatacggtagaaccgccc 42311125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 3829135 - 3828988
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    ||||||||||||||||||||||| ||||||||| ||| ||| |||||||||||||||||||||||||||||||||| |||||||||| |||||| |||||    
T  3829135 atagtgtgctaaataaaattcca-gacctatttgcgtatgaaaattttcagattgcccaaatttttctttttgtaagtgtgttaatgaacttttgggttg 3829037  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggt 149  Q
     || |||||||||||||||||||||||| |||| ||||||| |||||||    
T  3829036 ggtttaatgtgcaaaaattatcgatcgaacccgagcgaccgtccggggt 3828988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 5 - 153
Target Start/End: Complemental strand, 17445461 - 17445313
Alignment:
Q  5 tgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttgagtc 104  Q
    |||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||| |||||  ||    
T  17445461 tgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattgacttttgggttggatc 17445362  T
Q  105 taatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 153  Q
    |||||| |||||||||| |||| |||||||||||||||  |||||||||    
T  17445361 taatgtacaaaaattattgatccagcccgggcgaccgcatggggtcgcc 17445313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 5 - 173
Target Start/End: Complemental strand, 35907700 - 35907532
Alignment:
Q  5 tgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttgagtc 104  Q
    |||||||||||||||||| |||||||||| ||||||| |||||||||||| |||||| |||||||||||||| |||  |||| | ||||| ||||| |||    
T  35907700 tgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattacccaaaattttctttttgtaagtgtactaattggcttttgggttgggtc 35907601  T
Q  105 taatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccacacggtagaaccgcccatg 173  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||   ||||  |||||||||||    
T  35907600 taatgtgcaaaaattatcgatcaagcccgggcgaccgcccgaggtcgccgggcggtgaaaccgcccatg 35907532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 5 - 145
Target Start/End: Original strand, 321396 - 321536
Alignment:
Q  5 tgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttgagtc 104  Q
    |||| ||||||||||||| |||||||||| | | ||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||  ||    
T  321396 tgtgttaaataaaattccgagacctatttgcatatgagaattttcagattgcccaaatttttctttttgtaactgtgttaatggacttttgggttggatc 321495  T
Q  105 taatgtgcaaaaattatcgatcgagcccgggcgaccgcccg 145  Q
    |||||  ||||||||||||||||||||||| ||||||||||    
T  321496 taatgcacaaaaattatcgatcgagcccggacgaccgcccg 321536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 47 - 173
Target Start/End: Complemental strand, 23313345 - 23313218
Alignment:
Q  47 ttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttgagtctaatgtgcaa-aaattatcgatcgagcccgggcgaccgcccg 145  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| |||| ||| ||||||||||||| ||||||||    
T  23313345 ttcagattgcccaaatttttctttttgtaaatgtgttaatgaacttttatgttgagtctaatgtgcaacaaatcatcaatcgagcccgggcaaccgcccg 23313246  T
Q  146 gggtcgccacacggtagaaccgcccatg 173  Q
     | |||||| ||||||||||||||||||    
T  23313245 agatcgccatacggtagaaccgcccatg 23313218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 174 - 275
Target Start/End: Original strand, 38469492 - 38469593
Alignment:
Q  174 agagcatattactttaggcctcggagaggaattcatcgaggagacccaatatcaccttatttgttcatcttgtgtatggataaactttcccacatgatgt 273  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  38469492 agagcagattactttaggactcggagaggaattcatcgaggagacccaatatcgccttatttgttcatcttgtgtatggataaactttcccgcatgatgt 38469591  T
Q  274 tg 275  Q
    ||    
T  38469592 tg 38469593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 27 - 170
Target Start/End: Original strand, 41972314 - 41972458
Alignment:
Q  27 cctatttacgtgtgacaattttcagattgc--ccaaatttttctttttgtaaatgtgttaatggacttttaggttgagtctaatgtgcaaaaattatcga 124  Q
    ||||||| ||||||| ||||||||||||    |||||||||||||||||||| ||||||||| | |||||||||||  ||||||||||||||||||||||    
T  41972314 cctatttgcgtgtgagaattttcagattttttccaaatttttctttttgtaagtgtgttaataggcttttaggttggatctaatgtgcaaaaattatcga 41972413  T
Q  125 tcgagcccgggcgaccgcccggggtcgccacacggtagaaccgccc 170  Q
    ||||| || |||||||||||||||||||   ||||| |||||||||    
T  41972414 tcgag-ccaggcgaccgcccggggtcgctggacggtggaaccgccc 41972458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 27 - 153
Target Start/End: Complemental strand, 33489815 - 33489687
Alignment:
Q  27 cctatttacgtgtgacaattttcagatt--gcccaaatttttctttttgtaaatgtgttaatggacttttaggttgagtctaatgtgcaaaaattatcga 124  Q
    ||||||| ||||||| ||||||||||||  || |||||||||||||| |||| ||||||||||| ||||||| ||||||||||||| |||||||||||||    
T  33489815 cctatttgcgtgtgagaattttcagattttgctcaaatttttcttttagtaagtgtgttaatgggcttttagtttgagtctaatgtacaaaaattatcga 33489716  T
Q  125 tcgagcccgggcgaccgcccggggtcgcc 153  Q
     | | ||||  |||||| |||||||||||    
T  33489715 acaatcccgaacgaccgtccggggtcgcc 33489687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 153
Target Start/End: Original strand, 44352614 - 44352650
Alignment:
Q  117 attatcgatcgagcccgggcgaccgcccggggtcgcc 153  Q
    |||||||||||||||||||||||| ||||||||||||    
T  44352614 attatcgatcgagcccgggcgacctcccggggtcgcc 44352650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 153
Target Start/End: Complemental strand, 31867014 - 31866977
Alignment:
Q  116 aattatcgatcgagcccgggcgaccgcccggggtcgcc 153  Q
    |||||||| |||| ||||||||||||||||||||||||    
T  31867014 aattatcggtcgaacccgggcgaccgcccggggtcgcc 31866977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2142 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: scaffold2142
Description:

Target: scaffold2142; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 674 - 502
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||  ||||| |||||    
T  674 atagtgtgccaaataaaattccaagacctatttacgtgtgacaattttcaaattgcccaaatttttctttttataaatgtgttaatgagctttttggttg 575  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccacacggtagaaccgcccatg 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||    
T  574 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccgggatcgctacacggtggaaccgcccatg 502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 133; Significance: 3e-69; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 15838437 - 15838270
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  15838437 atagtgtgctaaataaaattccaagacctatttgcgtgtgaaaattttcagattgcccaaatttttctttt-gtaaatgtgttaatggactttttggttg 15838339  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccacacggtagaaccgcc 169  Q
    ||| |||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||||||    
T  15838338 agtttaatgtgcaaaaattatcaatcgagcccgggtgaccgcccggggtcgccatacggtagaaccgcc 15838270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 29728401 - 29728570
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    ||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||    
T  29728401 atagtgtgctaaataaaattcgaagacctatttgcgtgtcacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgagcttttgggttg 29728500  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccacacggtagaaccgccc 170  Q
    |||||||||||||||| ||||||||||||| |||||||||| |||||||||||| |||||||||||||||    
T  29728501 agtctaatgtgcaaaatttatcgatcgagcacgggcgaccgtccggggtcgccatacggtagaaccgccc 29728570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 39914666 - 39914494
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||| ||||||||||||||  ||||| |||||    
T  39914666 atagtgtgccaaataaaattccaagacctatttacttgtgacaattttcaaattgcccaaattttt-tttttataaatgtgttaatgagctttttggttg 39914568  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccacacggtagaaccgcccatga 174  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||    
T  39914567 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgctacacggtggaaccgtccatga 39914494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 3648809 - 3648978
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    |||||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||    
T  3648809 atagtgtgctaaataaaattccaaaacctacttgcgtgtgacaattttcagattgcccaaaattttctttttgtaaatgtgttaatgggcttttgggttg 3648908  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccacacggtagaaccgccc 170  Q
    ||||||||||| ||||||||||||||||||||||||||| | || || |||||| |||||||||||||||    
T  3648909 agtctaatgtgaaaaaattatcgatcgagcccgggcgactgtcccggatcgccatacggtagaaccgccc 3648978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 4 - 173
Target Start/End: Original strand, 34136843 - 34137012
Alignment:
Q  4 gtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttgagt 103  Q
    ||||||||||||||||| | |||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||    
T  34136843 gtgtgctaaataaaatttcgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattgacttttgggttgagt 34136942  T
Q  104 ctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccacacggtagaaccgcccatg 173  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||  |||| ||||||    
T  34136943 ctaatgtgcaaaaattatcgatcgagcccgggcgaccgctcggggtcgccagacggtgaaaccacccatg 34137012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 16788040 - 16788188
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    ||||||||||||||||||||||||||||||||| ||||||| | |||| ||||||||||||||||||||||||||| ||||||||| | ||||| |||||    
T  16788040 atagtgtgctaaataaaattccaagacctatttgcgtgtgagagttttaagattgcccaaatttttctttttgtaagtgtgttaattggcttttgggttg 16788139  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggt 149  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  16788140 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggt 16788188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 4 - 153
Target Start/End: Complemental strand, 4404157 - 4404008
Alignment:
Q  4 gtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttgagt 103  Q
    ||||||||||||||||||| |||||||||| ||||||| |||||| ||||||||||||||||||||||||||| | ||||||| | ||||| ||||||||    
T  4404157 gtgtgctaaataaaattccgagacctatttgcgtgtgagaatttttagattgcccaaatttttctttttgtaagtatgttaattggcttttgggttgagt 4404058  T
Q  104 ctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 153  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  4404057 ctaatgtgcaaaaattatcgatcgagcccgggcgaccgcctggggtcgcc 4404008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 23402260 - 23402108
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    |||||||| ||||||||||| | |||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||| | ||||| |||||    
T  23402260 atagtgtgttaaataaaatttcgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttgggttg 23402161  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 153  Q
     ||||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  23402160 ggtctaatatgcaaagattatcgatcgagcccgggcgaccgcccggggtcgcc 23402108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 36408703 - 36408551
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    |||||||| ||||||||||||  |||||||||  ||||| | |||||||| |||||| ||| |||||||||||||||||||||||||||||||| |||||    
T  36408703 atagtgtgttaaataaaattctgagacctattagcgtgtaagaattttcaaattgccaaaaattttctttttgtaaatgtgttaatggacttttgggttg 36408604  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 153  Q
      ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  36408603 gatctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccgaggtcgcc 36408551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 9877372 - 9877242
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    |||||||||||||||||||| | |||||||||| | ||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||     
T  9877372 atagtgtgctaaataaaatttcgagacctatttgcatgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattgacttttgggtta 9877273  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcc 131  Q
     ||||||||||||||||||||| ||||||||    
T  9877272 ggtctaatgtgcaaaaattatcaatcgagcc 9877242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 2729211 - 2729363
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    ||||||||||||||||||||   |||||||||| ||| ||| | |||||| |||||| |||  ||||||||| ||| ||||||||||| ||||| | |||    
T  2729211 atagtgtgctaaataaaattttgagacctatttgcgtatgagagttttcaaattgccaaaaaatttctttttataagtgtgttaatgggcttttggattg 2729310  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 153  Q
      | ||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  2729311 gatttaatgtgtaaaaattatcgatcgagcccgggcgtccgcccggggtcgcc 2729363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 27 - 137
Target Start/End: Complemental strand, 3435397 - 3435285
Alignment:
Q  27 cctatttacgtgtgacaattttcagatt--gcccaaatttttctttttgtaaatgtgttaatggacttttaggttgagtctaatgtgcaaaaattatcga 124  Q
    ||||||| ||| ||| ||||||||||||  |||||||||||||||||||||| |||||||||||  |||| ||||| |||||||||||||||||||||||    
T  3435397 cctatttgcgtttgagaattttcagattttgcccaaatttttctttttgtaagtgtgttaatgggtttttgggttgggtctaatgtgcaaaaattatcga 3435298  T
Q  125 tcgagcccgggcg 137  Q
    || ||||||||||    
T  3435297 tcaagcccgggcg 3435285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 42231089 - 42230971
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    |||||||||||||||||||||  |||||||||| | | ||| |||||||| |||||||||||||||||||||||||  ||||||||||||||||  ||||    
T  42231089 atagtgtgctaaataaaattctgagacctatttgcatatgagaattttcaaattgcccaaatttttctttttgtaa--gtgttaatggacttttgagttg 42230992  T
Q  101 agtctaatgtgcaaaaattat 121  Q
      | |||||||||||||||||    
T  42230991 gatttaatgtgcaaaaattat 42230971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 60 - 130
Target Start/End: Original strand, 40470567 - 40470637
Alignment:
Q  60 aatttttctttttgtaaatgtgttaatggacttttaggttgagtctaatgtgcaaaaattatcgatcgagc 130  Q
    ||||||| ||||| ||| |||||||||||||||||   ||| |||||||||||||||||||||||||||||    
T  40470567 aatttttttttttataagtgtgttaatggacttttgatttgggtctaatgtgcaaaaattatcgatcgagc 40470637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 153
Target Start/End: Original strand, 10397122 - 10397207
Alignment:
Q  68 tttttgtaaatgtgttaatggacttttaggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 153  Q
    ||||| ||| ||||||||| | ||||| ||||||  |||||||| | ||||||||||| ||||||||||||  |||||| ||||||    
T  10397122 tttttttaactgtgttaatcggcttttgggttgaacctaatgtgaagaaattatcgattgagcccgggcgagtgcccggagtcgcc 10397207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0502 (Bit Score: 109; Significance: 7e-55; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 5382 - 5230
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    |||||||||||||||||||||| |||||||||| | ||||| ||||||||||||||||||| |||||||||||||| ||||||||| | ||||||| |||    
T  5382 atagtgtgctaaataaaattccgagacctatttgcatgtgagaattttcagattgcccaaaattttctttttgtaagtgtgttaattggcttttagattg 5283  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 153  Q
     |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  5282 ggtctaatgtgcaaaaattattgatcgagcccgggcgaccgcccggggtcgcc 5230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 31632 - 31480
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    ||||||||| |||||||||| | |||||||||| || |||| ||||||||||||| |||||||||||||||||||| ||||||||||| ||||| |||||    
T  31632 atagtgtgcaaaataaaattactagacctatttgcgagtgagaattttcagattgtccaaatttttctttttgtaagtgtgttaatgggcttttgggttg 31533  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 153  Q
     ||||| |||||||||||||||||||||||||||||||||| | |||||||||    
T  31532 ggtctagtgtgcaaaaattatcgatcgagcccgggcgaccgtctggggtcgcc 31480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 94; Significance: 6e-46; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 53077 - 52944
Alignment:
Q  1 atagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttaggttg 100  Q
    |||||||||||||||||||||| |||||||||| | ||||| ||||||||||||| |||||||||||||||||||||||||||||| | ||||| ||||     
T  53077 atagtgtgctaaataaaattccgagacctatttgcatgtgagaattttcagattgtccaaatttttctttttgtaaatgtgttaattggcttttgggtta 52978  T
Q  101 agtctaatgtgcaaaaattatcgatcgagcccgg 134  Q
    | ||||||||||||||||||||||||||||||||    
T  52977 aatctaatgtgcaaaaattatcgatcgagcccgg 52944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0769 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0769
Description:

Target: scaffold0769; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 170
Target Start/End: Complemental strand, 1307 - 1260
Alignment:
Q  123 gatcgagcccgggcgaccgcccggggtcgccacacggtagaaccgccc 170  Q
    |||||||||||||||||||||||||||||||   ||||| ||||||||    
T  1307 gatcgagcccgggcgaccgcccggggtcgccgggcggtaaaaccgccc 1260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 94 - 153
Target Start/End: Complemental strand, 194087 - 194028
Alignment:
Q  94 taggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 153  Q
    ||||||| | ||||||||   ||||||  |||||||||||||||||||||||||||||||    
T  194087 taggttgggcctaatgtgaggaaattacggatcgagcccgggcgaccgcccggggtcgcc 194028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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