View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2585_low_54 (Length: 239)
Name: NF2585_low_54
Description: NF2585
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2585_low_54 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 4058440 - 4058678
Alignment:
| Q |
1 |
tgatgcaaaatcggatgaataggggattggaagggtgacatatataagccatttcgaagttttcttgctaattccacgagaaattctcattgtttgattg |
100 |
Q |
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| T |
4058440 |
tgatgcaaaatcggatgaataggggattggaagggtgacatatataagccatttcgaagttttcttgctaattccacgagaaattctcattgtttgattg |
4058539 |
T |
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| Q |
101 |
gatatgaagtttgtaatccaaacatggtctccaagtccatggccgtagagattgtagtagagattaatttgaaattaactatgcaaactgattgatttta |
200 |
Q |
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| T |
4058540 |
gatatgaagtttgtaatccaaacatggtctccaagtccatggccgtagagattgtagtagagattaatttgaaattaactatgcaaactgattgatttta |
4058639 |
T |
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| Q |
201 |
ttttgaagttgaattaaagttttagctgggttgttaaat |
239 |
Q |
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| T |
4058640 |
ttttgaagttgaattaaagttttagctgggttgttaaat |
4058678 |
T |
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