View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2586_high_3 (Length: 450)

Name: NF2586_high_3
Description: NF2586
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2586_high_3
NF2586_high_3
[»] chr1 (20 HSPs)
chr1 (14-434)||(38175590-38176010)
chr1 (14-93)||(28366259-28366338)
chr1 (14-68)||(14654400-14654454)
chr1 (14-68)||(14664191-14664245)
chr1 (14-68)||(14669769-14669823)
chr1 (14-68)||(14676625-14676679)
chr1 (14-68)||(14683743-14683797)
chr1 (14-68)||(14706081-14706135)
chr1 (14-68)||(14708571-14708625)
chr1 (14-68)||(14716284-14716338)
chr1 (14-68)||(33988063-33988117)
chr1 (14-65)||(14674477-14674528)
chr1 (14-65)||(14679855-14679906)
chr1 (14-64)||(14667171-14667221)
chr1 (14-68)||(14681592-14681646)
chr1 (14-61)||(14652525-14652572)
chr1 (14-61)||(14662316-14662363)
chr1 (14-58)||(11872541-11872585)
chr1 (20-65)||(28698549-28698594)
chr1 (14-55)||(37422175-37422216)
[»] chr5 (4 HSPs)
chr5 (14-399)||(7524650-7525015)
chr5 (14-93)||(3643608-3643687)
chr5 (14-64)||(1716512-1716562)
chr5 (14-57)||(4103249-4103292)
[»] chr4 (11 HSPs)
chr4 (26-399)||(49533697-49534059)
chr4 (14-170)||(49106589-49106745)
chr4 (14-169)||(49108693-49108848)
chr4 (14-153)||(50077259-50077397)
chr4 (14-68)||(3461202-3461256)
chr4 (14-64)||(11652452-11652502)
chr4 (14-60)||(26984727-26984773)
chr4 (14-60)||(26998800-26998846)
chr4 (14-60)||(48205832-48205878)
chr4 (15-54)||(26982549-26982588)
chr4 (20-56)||(34481155-34481191)
[»] chr8 (12 HSPs)
chr8 (14-255)||(40054128-40054359)
chr8 (14-68)||(41841212-41841266)
chr8 (14-67)||(44878977-44879030)
chr8 (14-67)||(44880891-44880944)
chr8 (18-69)||(42872514-42872565)
chr8 (14-64)||(10944459-10944509)
chr8 (14-59)||(37679757-37679802)
chr8 (14-61)||(37682057-37682104)
chr8 (18-93)||(42220909-42220984)
chr8 (346-434)||(40053976-40054069)
chr8 (15-68)||(42555144-42555197)
chr8 (14-44)||(44582870-44582900)
[»] chr2 (21 HSPs)
chr2 (14-266)||(43849851-43850096)
chr2 (14-68)||(8973305-8973359)
chr2 (14-68)||(8979315-8979369)
chr2 (14-68)||(9023440-9023494)
chr2 (14-68)||(9026779-9026833)
chr2 (14-68)||(30732001-30732055)
chr2 (14-67)||(32918074-32918127)
chr2 (14-68)||(8984686-8984740)
chr2 (14-64)||(9008018-9008068)
chr2 (14-68)||(9032046-9032100)
chr2 (14-62)||(2841077-2841125)
chr2 (14-68)||(9020840-9020894)
chr2 (14-64)||(30733985-30734035)
chr2 (14-68)||(9030391-9030445)
chr2 (14-59)||(19232459-19232504)
chr2 (14-68)||(8988448-8988502)
chr2 (14-64)||(8992145-8992195)
chr2 (14-64)||(9016490-9016540)
chr2 (23-58)||(39814115-39814150)
chr2 (346-411)||(43849697-43849762)
chr2 (14-54)||(10763938-10763978)
[»] chr6 (4 HSPs)
chr6 (14-153)||(10795950-10796088)
chr6 (14-153)||(10791712-10791850)
chr6 (14-61)||(30521242-30521289)
chr6 (14-59)||(8875691-8875736)
[»] chr3 (1 HSPs)
chr3 (14-59)||(15758563-15758608)


Alignment Details
Target: chr1 (Bit Score: 397; Significance: 0; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 397; E-Value: 0
Query Start/End: Original strand, 14 - 434
Target Start/End: Original strand, 38175590 - 38176010
Alignment:
Q  14 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaacgaagtctcgcatctgcttttatatgcacagtatacttagtttct 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| || |||||||||||||||    
T  38175590 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaatgaagcctcgcatctgcttttatatgaactgtatacttagtttct 38175689  T
Q  114 ttcttcattacccgatgtgggacttatatgcagtaccaccttgtgaccgactcttacttatacaccactcccgtttatctgctgctaagtttcgtttccc 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38175690 ttcttcattacccgatgtgggacttatatgcagtaccaccttgtgaccgactcttacttatacaccactcccgtttatctgctgctaagtttcgtttccc 38175789  T
Q  214 ttaaatttttaacgtgatgcctccggtatcaaaatggtaaataaatatcatatctcaaattaaaatcaatcatacaaactatgaggccaaacacacaaaa 313  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  38175790 ttaaatttttaacgtgatgcctccggcatcaaaatggtaaataaatatcatatctcaaattaaaatcaatcatacaaactatgaggccacacacacaaaa 38175889  T
Q  314 ttttacaaactatgcaatcaatcatatctaagaagttgatggctatgttcacaaccagggaattcacttgataacttatgactcttatacactacaaatt 413  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38175890 ttttacaaactatgcaatcaatcatatctaagaagttgatggctatgttcacaaccagggaattcacttgataacttatgactcttatacactacaaatt 38175989  T
Q  414 tctttattcccaagcattatc 434  Q
    |||||||||||||||||||||    
T  38175990 tctttattcccaagcattatc 38176010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 14 - 93
Target Start/End: Original strand, 28366259 - 28366338
Alignment:
Q  14 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaacgaagtctcgcatctgcttttatat 93  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    |  ||||||||||||||||||    
T  28366259 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaagaggggttcgcatctgcttttatat 28366338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 14 - 68
Target Start/End: Original strand, 14654400 - 14654454
Alignment:
Q  14 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaa 68  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14654400 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaa 14654454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 14 - 68
Target Start/End: Original strand, 14664191 - 14664245
Alignment:
Q  14 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaa 68  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14664191 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaa 14664245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 14 - 68
Target Start/End: Original strand, 14669769 - 14669823
Alignment:
Q  14 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaa 68  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14669769 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaa 14669823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 14 - 68
Target Start/End: Complemental strand, 14676679 - 14676625
Alignment:
Q  14 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaa 68  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14676679 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaa 14676625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 14 - 68
Target Start/End: Complemental strand, 14683797 - 14683743
Alignment:
Q  14 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaa 68  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14683797 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaa 14683743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 14 - 68
Target Start/End: Complemental strand, 14706135 - 14706081
Alignment:
Q  14 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaa 68  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14706135 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaa 14706081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 14 - 68
Target Start/End: Complemental strand, 14708625 - 14708571
Alignment:
Q  14 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaa 68  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14708625 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaa 14708571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 14 - 68
Target Start/End: Complemental strand, 14716338 - 14716284
Alignment:
Q  14 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaa 68  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14716338 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaa 14716284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 14 - 68
Target Start/End: Complemental strand, 33988117 - 33988063
Alignment:
Q  14 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaa 68  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33988117 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaa 33988063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 14674528 - 14674477
Alignment:
Q  14 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttg 65  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14674528 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttg 14674477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 14679906 - 14679855
Alignment:
Q  14 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttg 65  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14679906 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttg 14679855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 14 - 64
Target Start/End: Original strand, 14667171 - 14667221
Alignment:
Q  14 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagtt 64  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14667171 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagtt 14667221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 14 - 68
Target Start/End: Complemental strand, 14681646 - 14681592
Alignment:
Q  14 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaa 68  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  14681646 gaacagatactacacttgatcttagccaaaaggccgagaaaggtataagttgaaa 14681592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 14652572 - 14652525
Alignment:
Q  14 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatga 61  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  14652572 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatga 14652525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 14662363 - 14662316
Alignment:
Q  14 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatga 61  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  14662363 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatga 14662316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 11872541 - 11872585
Alignment:
Q  14 gaacagatactacacttgatcttagccaaaaggccgagaaaggta 58  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||    
T  11872541 gaacagatagtacacttgatcttagtcaaaaggccgagaaaggta 11872585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 28698594 - 28698549
Alignment:
Q  20 atactacacttgatcttagccaaaaggccgagaaaggtatgagttg 65  Q
    |||||||| ||||||||||||||||| |||||||| ||||||||||    
T  28698594 atactacatttgatcttagccaaaagaccgagaaatgtatgagttg 28698549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 37422216 - 37422175
Alignment:
Q  14 gaacagatactacacttgatcttagccaaaaggccgagaaag 55  Q
    ||||| || |||||||||||||||||||||||||||||||||    
T  37422216 gaacatatgctacacttgatcttagccaaaaggccgagaaag 37422175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 211; Significance: 1e-115; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 14 - 399
Target Start/End: Complemental strand, 7525015 - 7524650
Alignment:
Q  14 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaacgaagtctcgcatctgcttttatatgcacagtatacttagtttct 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |   || |||| ||||||||||| ||| || |||| ||||  |    
T  7525015 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgacttgaaacaacaccttgcat-tgcttttatatccactgtctactcagttctt 7524917  T
Q  114 ttcttcattacccgatgtgggacttatatgcagtaccaccttgtgaccgactcttacttatacaccactcccgtttatctgctgctaagtttcgtttccc 213  Q
    ||||||||||||||||||||||||| ||||||| ||||||||                 | |||||||| ||||||||||||||||||||||||||||||    
T  7524916 ttcttcattacccgatgtgggacttttatgcagcaccacctt-----------------acacaccacttccgtttatctgctgctaagtttcgtttccc 7524834  T
Q  214 ttaaatttttaacgtgatgcctccggtatcaaaatggtaaataaatatcatatctcaaattaaaatcaatcatacaaactatgaggccaaacacacaaaa 313  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||    
T  7524833 ttaaatttttaacgtgatgcctccagtatcaaaatggtaaataaatatcatatctcaaattaaaatcaatcatacaaactatgaggccacacacacataa 7524734  T
Q  314 ttttacaaactatgcaatcaatcatatctaagaagttgatggctatgttcacaaccagggaattcacttgataacttatgactctt 399  Q
    |||  |||||||||||||||||||||||| ||||||||| |||||||||||||| |||| ||  ||||||||||||||||||||||    
T  7524733 tttcgcaaactatgcaatcaatcatatctcagaagttgaaggctatgttcacaatcaggtaa--cacttgataacttatgactctt 7524650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 14 - 93
Target Start/End: Complemental strand, 3643687 - 3643608
Alignment:
Q  14 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaacgaagtctcgcatctgcttttatat 93  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || |||  ||||||||| |||| ||||||||    
T  3643687 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgaatttaaagtaagtctcgcttctgtttttatat 3643608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 14 - 64
Target Start/End: Original strand, 1716512 - 1716562
Alignment:
Q  14 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagtt 64  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1716512 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagtt 1716562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 4103292 - 4103249
Alignment:
Q  14 gaacagatactacacttgatcttagccaaaaggccgagaaaggt 57  Q
    |||||||||||||||||||||||| |||||| || |||||||||    
T  4103292 gaacagatactacacttgatcttaaccaaaatgctgagaaaggt 4103249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 169; Significance: 2e-90; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 26 - 399
Target Start/End: Original strand, 49533697 - 49534059
Alignment:
Q  26 cacttgatcttagccaaaaggccgagaaaggtatgagttgaaacgaagtctcgcatctgcttttatatgcacagtatacttagtttctttcttcattacc 125  Q
    |||||||||||||||||  |||||||||||||||| |||| ||  | | || || |||| ||||||||  || || || | ||||||||||||||||| |    
T  49533697 cacttgatcttagccaag-ggccgagaaaggtatgggttggaataagggctggcttctggttttatatcaactgtctaatcagtttctttcttcattagc 49533795  T
Q  126 cgatgtgggacttatatgcagtaccaccttgtgaccgactcttacttatacaccactcccgtttatctgctgctaagtttcgtttccctta----aattt 221  Q
    ||||||||||||| ||||||||||||  ||||||| |||||||||    ||||||          |||||||||| |||||||||||||||    || ||    
T  49533796 cgatgtgggacttttatgcagtaccattttgtgactgactcttac----acacca----------tctgctgctatgtttcgtttcccttacttaaaatt 49533881  T
Q  222 ttaacgtgatgcctccggtatcaaaatggtaaataaatatcatatctcaaattaaaatcaatcatacaaactatgaggccaaacacacaaaattttacaa 321  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  49533882 ttaacgtgatgcctccagtattaaaatggtaaataaatatcatatctcaaattaaaatcaatcatacaaactatgaggccacacacacaaaattttacaa 49533981  T
Q  322 actatgcaatcaatcatatctaagaagttgatggctatgttcacaaccagggaattcacttgataacttatgactctt 399  Q
    |||||||||||| |||||||| |||||||||  ||||||||||||| |||||||||||||| |||||||||| |||||    
T  49533982 actatgcaatcattcatatctcagaagttgaaagctatgttcacaatcagggaattcacttaataacttatggctctt 49534059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 14 - 170
Target Start/End: Original strand, 49106589 - 49106745
Alignment:
Q  14 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaacgaagtctcgcatctgcttttatatgcacagtatacttagtttct 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  | || || |||||||||||||  || || || | |||| ||    
T  49106589 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaagggtggctggcttctgcttttatatcaactgtctaatcagttcct 49106688  T
Q  114 ttcttcattacccgatgtgggacttatatgcagtaccaccttgtgaccgactcttac 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  49106689 ttcttcattacccgatgtgggacttatatgcagtaccaccttgtgactgactcttac 49106745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 14 - 169
Target Start/End: Original strand, 49108693 - 49108848
Alignment:
Q  14 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaacgaagtctcgcatctgcttttatatgcacagtatacttagtttct 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||   || || || |||| ||||||||  || || || | |||| ||    
T  49108693 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaatataggctggcttctgattttatatcaactgtctattcagttcct 49108792  T
Q  114 ttcttcattacccgatgtgggacttatatgcagtaccaccttgtgaccgactctta 169  Q
    ||| | ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  49108793 ttccttattacccgatgtgggacttatatgcagtaccaccttgtgactgactctta 49108848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 14 - 153
Target Start/End: Original strand, 50077259 - 50077397
Alignment:
Q  14 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaacgaag-tctcgcatctgcttttatatgcacagtatacttagtttc 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  || || |||||||||||||  || ||  ||||||||||    
T  50077259 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaa-gaagagctggcttctgcttttatatcaactgt-cacttagtttc 50077356  T
Q  113 tttcttcattacccgatgtgggacttatatgcagtaccacc 153  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  50077357 tttcttcattacccgatatgggacttatatgcagtaccacc 50077397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 14 - 68
Target Start/End: Original strand, 3461202 - 3461256
Alignment:
Q  14 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaa 68  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  3461202 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgaattgaaa 3461256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 14 - 64
Target Start/End: Original strand, 11652452 - 11652502
Alignment:
Q  14 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagtt 64  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11652452 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagtt 11652502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 26984727 - 26984773
Alignment:
Q  14 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatg 60  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  26984727 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatg 26984773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 26998800 - 26998846
Alignment:
Q  14 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatg 60  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  26998800 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatg 26998846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 14 - 60
Target Start/End: Complemental strand, 48205878 - 48205832
Alignment:
Q  14 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatg 60  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||    
T  48205878 gaacagatactacacttaatcttagctaaaaggccgagaaaggtatg 48205832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 26982588 - 26982549
Alignment:
Q  15 aacagatactacacttgatcttagccaaaaggccgagaaa 54  Q
    ||||||| |||||||||||||||||||| |||||||||||    
T  26982588 aacagatgctacacttgatcttagccaagaggccgagaaa 26982549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 34481155 - 34481191
Alignment:
Q  20 atactacacttgatcttagccaaaaggccgagaaagg 56  Q
    |||||||||| ||||||||||||||||| ||||||||    
T  34481155 atactacactcgatcttagccaaaaggctgagaaagg 34481191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 115; Significance: 3e-58; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 14 - 255
Target Start/End: Complemental strand, 40054359 - 40054128
Alignment:
Q  14 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaacgaagtctcgcatctgcttttatatgcacagtatacttagtttct 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || ||| || | ||||||||| ||||||||| ||  || |||| |||| ||    
T  40054359 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgaattaaaatgaggcctcgcatcttcttttatatccagtgtctactcagttcct 40054260  T
Q  114 ttcttcattacccgatgtgggacttatatgcagtaccaccttgtgaccgactcttacttatacaccactcccgtttatctgctgctaagtttcgtttccc 213  Q
    ||||||||||  ||||||||||||| |||||||||  |||||| |          |||  ||||||| ||||||||||||||||||||||||||||||||    
T  40054259 ttcttcattattcgatgtgggacttttatgcagtagtaccttggg----------actattacaccattcccgtttatctgctgctaagtttcgtttccc 40054170  T
Q  214 ttaaatttttaacgtgatgcctccggtatcaaaatggtaaat 255  Q
    ||| |||||||||||||||||||| |||||||||||||||||    
T  40054169 ttatatttttaacgtgatgcctccagtatcaaaatggtaaat 40054128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 14 - 68
Target Start/End: Original strand, 41841212 - 41841266
Alignment:
Q  14 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaa 68  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41841212 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaa 41841266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 14 - 67
Target Start/End: Complemental strand, 44879030 - 44878977
Alignment:
Q  14 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaa 67  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44879030 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaa 44878977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 14 - 67
Target Start/End: Original strand, 44880891 - 44880944
Alignment:
Q  14 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaa 67  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44880891 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaa 44880944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 42872514 - 42872565
Alignment:
Q  18 agatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaac 69  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  42872514 agatactacacttaatcttagccaaaaggccgagaaaggtatgagttgaaac 42872565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 14 - 64
Target Start/End: Original strand, 10944459 - 10944509
Alignment:
Q  14 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagtt 64  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  10944459 gaacagatactacacttgatcttagccaaaaggtcgagaaaggtatgagtt 10944509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 14 - 59
Target Start/End: Complemental strand, 37679802 - 37679757
Alignment:
Q  14 gaacagatactacacttgatcttagccaaaaggccgagaaaggtat 59  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  37679802 gaacagatactacacttgatcttagccaaaaggccgagaaaggtat 37679757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 37682104 - 37682057
Alignment:
Q  14 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatga 61  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  37682104 gaacagatactacacttgatcttagccaaaaggccgagaaatgtatga 37682057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 42220909 - 42220984
Alignment:
Q  18 agatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaacgaagtctcgcatctgcttttatat 93  Q
    |||||||||||||||||||||||||||| |||| ||| |||||||||||||   |  ||||| |||||||||||||    
T  42220909 agatactacacttgatcttagccaaaagaccgaaaaatgtatgagttgaaagctatgctcgcctctgcttttatat 42220984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 346 - 434
Target Start/End: Complemental strand, 40054069 - 40053976
Alignment:
Q  346 aagttgatggctatgttcacaaccagggaattcacttga-----taacttatgactcttatacactacaaatttctttattcccaagcattatc 434  Q
    ||||||| |||||||||||||| ||||||||| ||||||     |||||| | | |||| |||||||||||||| |||||||| || |||||||    
T  40054069 aagttgaaggctatgttcacaatcagggaatttacttgacttaataacttgtcagtcttctacactacaaatttatttattcctaaacattatc 40053976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 68
Target Start/End: Original strand, 42555144 - 42555197
Alignment:
Q  15 aacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaa 68  Q
    ||||||| || ||||||||||||||||||||  | |||||||||||||||||||    
T  42555144 aacagattctgcacttgatcttagccaaaagatcaagaaaggtatgagttgaaa 42555197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 44
Target Start/End: Complemental strand, 44582900 - 44582870
Alignment:
Q  14 gaacagatactacacttgatcttagccaaaa 44  Q
    |||||||||||||||||||||||||||||||    
T  44582900 gaacagatactacacttgatcttagccaaaa 44582870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 101; Significance: 7e-50; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 14 - 266
Target Start/End: Complemental strand, 43850096 - 43849851
Alignment:
Q  14 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaacgaagtct-cgcatctgcttttatatgcacagtatacttagtttc 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| || ||||||||||||||||| | | || |||| || | |    
T  43850096 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaa-taaggctacgcatctgcttttatatcctctgtctactcagatcc 43849998  T
Q  113 tttcttcattacccgatgtgggacttatatgcagtaccaccttgtgaccgactcttacttatacaccactcccgtttatctgctgctaagtttcgtttcc 212  Q
    |||||| |||||||||||||||||   ||||||||| |||||||     |||||||||    ||||  ||||| | |||||||||||||||||||| |||    
T  43849997 tttcttgattacccgatgtgggac---tatgcagtagcaccttg----ggactcttac----acactgctcccatatatctgctgctaagtttcgtatcc 43849909  T
Q  213 ----cttaaatttttaacgtgatgcctccggtatcaaaatggtaaataaatatcatat 266  Q
        ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  43849908 cttacttaaatttttaaggtgatgcctccagtatcaaaatggtaaataaatatcatat 43849851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 14 - 68
Target Start/End: Complemental strand, 8973359 - 8973305
Alignment:
Q  14 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaa 68  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8973359 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaa 8973305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 14 - 68
Target Start/End: Complemental strand, 8979369 - 8979315
Alignment:
Q  14 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaa 68  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8979369 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaa 8979315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 14 - 68
Target Start/End: Complemental strand, 9023494 - 9023440
Alignment:
Q  14 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaa 68  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9023494 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaa 9023440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 14 - 68
Target Start/End: Complemental strand, 9026833 - 9026779
Alignment:
Q  14 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaa 68  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9026833 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaa 9026779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 14 - 68
Target Start/End: Complemental strand, 30732055 - 30732001
Alignment:
Q  14 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaa 68  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30732055 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaa 30732001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 14 - 67
Target Start/End: Complemental strand, 32918127 - 32918074
Alignment:
Q  14 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaa 67  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32918127 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaa 32918074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 14 - 68
Target Start/End: Complemental strand, 8984740 - 8984686
Alignment:
Q  14 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaa 68  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  8984740 gaacaaatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaa 8984686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 14 - 64
Target Start/End: Complemental strand, 9008068 - 9008018
Alignment:
Q  14 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagtt 64  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9008068 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagtt 9008018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 14 - 68
Target Start/End: Complemental strand, 9032100 - 9032046
Alignment:
Q  14 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaa 68  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  9032100 gaacagatactacacttgatcttaaccaaaaggccgagaaaggtatgagttgaaa 9032046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 2841077 - 2841125
Alignment:
Q  14 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgag 62  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  2841077 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgag 2841125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 14 - 68
Target Start/End: Complemental strand, 9020894 - 9020840
Alignment:
Q  14 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaa 68  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  9020894 gaacagatactacacttgatcttagccaaaaggccgagaaatgtatgaattgaaa 9020840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 14 - 64
Target Start/End: Complemental strand, 30734035 - 30733985
Alignment:
Q  14 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagtt 64  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  30734035 gaacagatactacacttgatcttagccaaaaggccgagaaaggtataagtt 30733985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 14 - 68
Target Start/End: Complemental strand, 9030445 - 9030391
Alignment:
Q  14 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaa 68  Q
    ||||||||||||||||||||||||||||||||||| |||||  ||||||||||||    
T  9030445 gaacagatactacacttgatcttagccaaaaggccaagaaaaatatgagttgaaa 9030391  T

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Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 14 - 59
Target Start/End: Original strand, 19232459 - 19232504
Alignment:
Q  14 gaacagatactacacttgatcttagccaaaaggccgagaaaggtat 59  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||    
T  19232459 gaacagatattacacttgatcttagccaaaaggccgagaaaggtat 19232504  T

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Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 68
Target Start/End: Complemental strand, 8988502 - 8988448
Alignment:
Q  14 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaa 68  Q
    ||||| ||||||||||||||||| ||||||||||| |||| ||||| ||||||||    
T  8988502 gaacaaatactacacttgatcttcgccaaaaggccaagaatggtataagttgaaa 8988448  T

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Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 64
Target Start/End: Complemental strand, 8992195 - 8992145
Alignment:
Q  14 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagtt 64  Q
    ||||| |||||||||||||||||||||||||| | |||||||| |||||||    
T  8992195 gaacatatactacacttgatcttagccaaaagactgagaaaggcatgagtt 8992145  T

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Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 64
Target Start/End: Complemental strand, 9016540 - 9016490
Alignment:
Q  14 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagtt 64  Q
    |||||||||||||| |||||||||||||||||| |||  ||||||||||||    
T  9016540 gaacagatactacatttgatcttagccaaaaggtcgaataaggtatgagtt 9016490  T

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Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 23 - 58
Target Start/End: Complemental strand, 39814150 - 39814115
Alignment:
Q  23 ctacacttgatcttagccaaaaggccgagaaaggta 58  Q
    |||||||||||| |||||||||||||||||||||||    
T  39814150 ctacacttgatcatagccaaaaggccgagaaaggta 39814115  T

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Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 346 - 411
Target Start/End: Complemental strand, 43849762 - 43849697
Alignment:
Q  346 aagttgatggctatgttcacaaccagggaattcacttgataacttatgactcttatacactacaaa 411  Q
    ||||||| ||||| |||||||| |||| ||||||||| |||| || ||| |||| |||||||||||    
T  43849762 aagttgaaggctacgttcacaatcaggaaattcacttcataatttgtgattcttttacactacaaa 43849697  T

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Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 10763938 - 10763978
Alignment:
Q  14 gaacagatactacacttgatcttagccaaaaggccgagaaa 54  Q
    ||||| ||||||||||||||||||| |||||| ||||||||    
T  10763938 gaacatatactacacttgatcttagtcaaaagaccgagaaa 10763978  T

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Target: chr6 (Bit Score: 85; Significance: 2e-40; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 14 - 153
Target Start/End: Original strand, 10795950 - 10796088
Alignment:
Q  14 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaacgaag-tctcgcatctgcttttatatgcacagtatacttagtttc 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  || || |||||||||||||  || ||  ||| ||||||    
T  10795950 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaa-gaagagctggcttctgcttttatatcaactgt-cactcagtttc 10796047  T
Q  113 tttcttcattacccgatgtgggacttatatgcagtaccacc 153  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  10796048 tttcttcattacccgatgtgggacttatatgcagtaccacc 10796088  T

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Target: chr6; HSP #2
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 14 - 153
Target Start/End: Original strand, 10791712 - 10791850
Alignment:
Q  14 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaacgaag-tctcgcatctgcttttatatgcacagtatacttagtttc 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||   | || |||||||||||||  || ||  ||||||||||    
T  10791712 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatgagttgaaa-gaagagttggcttctgcttttatatcaactgt-cacttagtttc 10791809  T
Q  113 tttcttcattacccgatgtgggacttatatgcagtaccacc 153  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  10791810 tttcttcattacccgatatgggacttatatgcagtaccacc 10791850  T

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Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 30521289 - 30521242
Alignment:
Q  14 gaacagatactacacttgatcttagccaaaaggccgagaaaggtatga 61  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||    
T  30521289 gaacagatactacacttgatctcagccaaaaggtcgagaaaggtatga 30521242  T

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Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 14 - 59
Target Start/End: Complemental strand, 8875736 - 8875691
Alignment:
Q  14 gaacagatactacacttgatcttagccaaaaggccgagaaaggtat 59  Q
    ||||||||| |||||||||||||||||||||||||| |||| ||||    
T  8875736 gaacagatattacacttgatcttagccaaaaggccgggaaatgtat 8875691  T

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Target: chr3 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 14 - 59
Target Start/End: Original strand, 15758563 - 15758608
Alignment:
Q  14 gaacagatactacacttgatcttagccaaaaggccgagaaaggtat 59  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||    
T  15758563 gaacagatattacacttgatcttagccaaaaggctgagaaaggtat 15758608  T

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