View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2586_low_11 (Length: 295)
Name: NF2586_low_11
Description: NF2586
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2586_low_11 |
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Alignment Details
Target: chr6 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 24 - 278
Target Start/End: Complemental strand, 29009272 - 29009018
Alignment:
| Q |
24 |
cttcttcttcattgctctgagatttcactttctgaatttgcaggtacataaccaaattctctgttctgaattcataacaaactcttcaaccgcgcaaaga |
123 |
Q |
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| T |
29009272 |
cttcttcttcattgctctgagatttcactttctgaatttgcaggtacataaccacattctctgttctgaattcataacaaactcttcaaccgcgcaaaga |
29009173 |
T |
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| Q |
124 |
tcatatatgttcgcttcaacttcttgattaaattcttcaaattccgattctggtttcattttattcaaattcaccttcacatttctatataatttgcatt |
223 |
Q |
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||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29009172 |
tcatataggttcgcttcaacttcttgattacattcttcaaattccgattctggtttcattttattcaaattcaccttcacatttctatataatttgcatt |
29009073 |
T |
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| Q |
224 |
tgcacgctactattttcactgaaactaattcttcaatttcatttgacactgttac |
278 |
Q |
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|||||||||| ||||||||||||||||||||||||||| ||||||| |||||||| |
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| T |
29009072 |
tgcacgctacaattttcactgaaactaattcttcaattgcatttgatactgttac |
29009018 |
T |
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