View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2586_low_31 (Length: 205)
Name: NF2586_low_31
Description: NF2586
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2586_low_31 |
 | |
|
Alignment Details
Target: chr3 (Bit Score: 117; Significance: 8e-60; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 16 - 189
Target Start/End: Original strand, 26203139 - 26203312
Alignment:
| Q |
16 |
caaaggagcgacaaactcatttctcaattaggtctcagattctgaattgagtaaagtttcaatatttggaaccaaggaaaagtcataaattaaaatcaca |
115 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26203139 |
caaaggagcgacaaactcatttctcaattaggtctcagattctgaattgagtaaagtttcaatatttggaaccaaggaaaagtcataaattaaaatcaca |
26203238 |
T |
|
| Q |
116 |
tannnnnnnnnnnngagggagtatataaaatcacatannnnnnnaaatctttgagaaaagatatatattataat |
189 |
Q |
| |
|
|| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
26203239 |
tatttcttttttttgagggagtatataaaatcacatatttttttaaatctttgagaaaagatatatattataat |
26203312 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University