View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2586_low_5 (Length: 450)

Name: NF2586_low_5
Description: NF2586
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2586_low_5
NF2586_low_5
[»] chr2 (54 HSPs)
chr2 (13-411)||(4685040-4685436)
chr2 (13-87)||(37851717-37851793)
chr2 (127-190)||(1988285-1988346)
chr2 (111-190)||(14253480-14253557)
chr2 (112-218)||(45694147-45694251)
chr2 (129-190)||(40950895-40950954)
chr2 (38-87)||(26310154-26310203)
chr2 (38-82)||(11071492-11071536)
chr2 (116-190)||(346381-346453)
chr2 (32-87)||(4875657-4875712)
chr2 (49-87)||(8868796-8868834)
chr2 (38-83)||(346484-346529)
chr2 (38-83)||(2050753-2050798)
chr2 (38-83)||(4559446-4559491)
chr2 (38-83)||(9733985-9734030)
chr2 (38-83)||(13760854-13760899)
chr2 (129-189)||(14832786-14832844)
chr2 (38-83)||(37233316-37233361)
chr2 (38-87)||(37533839-37533888)
chr2 (38-83)||(41750416-41750461)
chr2 (129-188)||(3902432-3902489)
chr2 (38-82)||(5770250-5770294)
chr2 (116-187)||(18713696-18713765)
chr2 (116-190)||(5770146-5770218)
chr2 (129-187)||(6571663-6571719)
chr2 (116-218)||(11071568-11071668)
chr2 (129-223)||(11763374-11763466)
chr2 (116-190)||(28311733-28311805)
chr2 (116-190)||(37233392-37233464)
chr2 (129-190)||(9733882-9733941)
chr2 (129-159)||(13539644-13539674)
chr2 (41-87)||(18713792-18713838)
chr2 (38-88)||(23944050-23944100)
chr2 (129-190)||(37192498-37192557)
chr2 (129-190)||(39995167-39995226)
chr2 (129-218)||(41297926-41298013)
chr2 (129-159)||(45693103-45693133)
chr2 (116-188)||(2050829-2050899)
chr2 (13-87)||(5002971-5003047)
chr2 (38-83)||(6171678-6171723)
chr2 (116-188)||(6171754-6171824)
chr2 (130-190)||(20426519-20426577)
chr2 (38-83)||(21737547-21737592)
chr2 (129-190)||(26310243-26310304)
chr2 (38-83)||(28311836-28311881)
chr2 (38-83)||(40950998-40951043)
chr2 (38-87)||(41298053-41298102)
chr2 (129-189)||(41750505-41750563)
chr2 (38-83)||(45409137-45409182)
chr2 (32-72)||(13539549-13539589)
chr2 (38-82)||(17965870-17965914)
chr2 (51-87)||(25724925-25724961)
chr2 (107-218)||(37533906-37534015)
chr2 (38-82)||(42674801-42674845)
[»] chr4 (52 HSPs)
chr4 (13-87)||(18094112-18094188)
chr4 (38-83)||(25916172-25916217)
chr4 (31-86)||(7258847-7258902)
chr4 (116-190)||(13230025-13230097)
chr4 (112-218)||(51968740-51968844)
chr4 (129-218)||(10400813-10400900)
chr4 (32-86)||(18405638-18405692)
chr4 (129-190)||(23686767-23686826)
chr4 (129-218)||(45596248-45596335)
chr4 (38-83)||(13230128-13230173)
chr4 (38-83)||(23686678-23686723)
chr4 (38-83)||(25932332-25932377)
chr4 (38-83)||(27555317-27555362)
chr4 (38-83)||(27763038-27763083)
chr4 (38-83)||(35999577-35999622)
chr4 (38-83)||(41859185-41859230)
chr4 (38-83)||(42773839-42773884)
chr4 (38-83)||(48519030-48519075)
chr4 (38-83)||(48873912-48873957)
chr4 (38-83)||(48879216-48879261)
chr4 (38-83)||(50673044-50673089)
chr4 (129-184)||(12275953-12276006)
chr4 (35-87)||(32384529-32384581)
chr4 (32-88)||(36858511-36858567)
chr4 (127-190)||(41744256-41744317)
chr4 (38-82)||(55968140-55968184)
chr4 (128-218)||(24805093-24805181)
chr4 (32-87)||(37014520-37014575)
chr4 (116-190)||(45747832-45747904)
chr4 (128-171)||(48060034-48060077)
chr4 (129-218)||(35999666-35999753)
chr4 (129-190)||(40435880-40435939)
chr4 (129-190)||(48518927-48518986)
chr4 (129-190)||(48879305-48879364)
chr4 (32-82)||(51968661-51968711)
chr4 (38-83)||(6280060-6280105)
chr4 (38-83)||(8322136-8322181)
chr4 (38-83)||(18405372-18405417)
chr4 (129-189)||(25932421-25932479)
chr4 (38-83)||(34238093-34238138)
chr4 (38-87)||(36858297-36858346)
chr4 (129-170)||(38394886-38394927)
chr4 (38-83)||(39730432-39730477)
chr4 (38-83)||(40435791-40435836)
chr4 (38-83)||(43723155-43723200)
chr4 (38-83)||(45596159-45596204)
chr4 (127-188)||(47426278-47426338)
chr4 (38-82)||(31938010-31938054)
chr4 (129-188)||(33900982-33901039)
chr4 (116-187)||(34049636-34049705)
chr4 (38-82)||(34049737-34049781)
chr4 (127-159)||(52469676-52469708)
[»] chr1 (64 HSPs)
chr1 (129-218)||(30240986-30241073)
chr1 (10-206)||(13440252-13440447)
chr1 (13-87)||(52699601-52699677)
chr1 (128-187)||(33702381-33702438)
chr1 (32-87)||(31806889-31806944)
chr1 (116-189)||(5518541-5518612)
chr1 (38-83)||(32824809-32824854)
chr1 (38-82)||(1597482-1597526)
chr1 (116-190)||(3572601-3572673)
chr1 (116-218)||(19083113-19083213)
chr1 (116-218)||(19131001-19131101)
chr1 (112-218)||(52699474-52699578)
chr1 (129-190)||(47037434-47037493)
chr1 (38-88)||(52630661-52630711)
chr1 (38-83)||(2430384-2430429)
chr1 (38-83)||(3572704-3572749)
chr1 (38-83)||(9115725-9115770)
chr1 (38-83)||(9832009-9832054)
chr1 (38-83)||(12190316-12190361)
chr1 (38-83)||(14788611-14788656)
chr1 (38-83)||(20260225-20260270)
chr1 (38-83)||(25789651-25789696)
chr1 (38-83)||(32202452-32202497)
chr1 (38-87)||(37436755-37436804)
chr1 (38-83)||(46666596-46666641)
chr1 (38-83)||(47037345-47037390)
chr1 (128-188)||(48916060-48916118)
chr1 (129-188)||(37261824-37261881)
chr1 (38-82)||(39329496-39329540)
chr1 (107-224)||(1227880-1227995)
chr1 (116-190)||(2430460-2430532)
chr1 (116-167)||(2632816-2632867)
chr1 (129-187)||(4683413-4683469)
chr1 (31-86)||(11014577-11014632)
chr1 (116-218)||(12190185-12190285)
chr1 (32-87)||(47677525-47677580)
chr1 (132-190)||(49822953-49823009)
chr1 (129-190)||(1597378-1597437)
chr1 (129-190)||(6978747-6978806)
chr1 (38-88)||(8331902-8331952)
chr1 (129-190)||(9115814-9115873)
chr1 (33-87)||(13653734-13653788)
chr1 (116-166)||(13931942-13931992)
chr1 (32-86)||(19923600-19923654)
chr1 (129-190)||(25789740-25789799)
chr1 (32-82)||(29769393-29769443)
chr1 (117-167)||(32824887-32824937)
chr1 (129-190)||(35187433-35187492)
chr1 (129-190)||(36361759-36361818)
chr1 (129-218)||(38519070-38519157)
chr1 (141-190)||(38964715-38964762)
chr1 (129-190)||(39930434-39930493)
chr1 (33-87)||(48916157-48916211)
chr1 (129-189)||(9831907-9831965)
chr1 (116-188)||(20505027-20505097)
chr1 (13-87)||(24116470-24116546)
chr1 (128-188)||(37436659-37436717)
chr1 (38-83)||(51445218-51445263)
chr1 (129-188)||(3939517-3939574)
chr1 (129-188)||(13653828-13653885)
chr1 (116-187)||(17475360-17475429)
chr1 (112-168)||(24116391-24116447)
chr1 (112-160)||(45772041-45772089)
chr1 (51-83)||(46960528-46960560)
[»] chr7 (57 HSPs)
chr7 (111-218)||(18824103-18824209)
chr7 (13-72)||(5543282-5543343)
chr7 (116-190)||(45045589-45045661)
chr7 (32-86)||(47246201-47246255)
chr7 (38-83)||(43949132-43949177)
chr7 (116-187)||(11000665-11000735)
chr7 (116-170)||(25045671-25045725)
chr7 (116-197)||(25098032-25098111)
chr7 (127-188)||(41684060-41684119)
chr7 (116-218)||(45440870-45440971)
chr7 (129-190)||(48341338-48341397)
chr7 (38-83)||(8419728-8419773)
chr7 (38-83)||(11329880-11329925)
chr7 (38-83)||(16825493-16825538)
chr7 (38-83)||(25045756-25045801)
chr7 (38-83)||(25097956-25098001)
chr7 (38-83)||(27248180-27248225)
chr7 (38-83)||(27419363-27419408)
chr7 (128-188)||(30871163-30871221)
chr7 (38-83)||(39554070-39554115)
chr7 (38-83)||(44820141-44820186)
chr7 (38-83)||(45045513-45045558)
chr7 (38-82)||(28904326-28904370)
chr7 (38-82)||(34930607-34930651)
chr7 (32-88)||(38528839-38528895)
chr7 (116-190)||(9947026-9947098)
chr7 (20-87)||(31921862-31921929)
chr7 (116-190)||(33378805-33378877)
chr7 (116-190)||(40212852-40212924)
chr7 (13-77)||(40385773-40385839)
chr7 (112-190)||(43949204-43949280)
chr7 (109-187)||(44566001-44566077)
chr7 (129-214)||(5543143-5543226)
chr7 (129-190)||(11329969-11330028)
chr7 (129-190)||(25924673-25924732)
chr7 (129-190)||(27213891-27213950)
chr7 (129-190)||(27419260-27419319)
chr7 (129-190)||(39554159-39554218)
chr7 (116-170)||(45723112-45723166)
chr7 (109-170)||(6656526-6656586)
chr7 (38-87)||(11000589-11000638)
chr7 (129-189)||(16825391-16825449)
chr7 (38-83)||(33378721-33378766)
chr7 (38-83)||(35488328-35488373)
chr7 (38-83)||(37534242-37534287)
chr7 (129-170)||(38528761-38528802)
chr7 (38-83)||(44565932-44565977)
chr7 (38-83)||(45265187-45265232)
chr7 (38-83)||(48160712-48160757)
chr7 (38-83)||(48341250-48341295)
chr7 (38-82)||(9814354-9814398)
chr7 (128-187)||(10902689-10902746)
chr7 (32-72)||(10902822-10902862)
chr7 (112-164)||(31598636-31598688)
chr7 (38-82)||(40212776-40212820)
chr7 (38-82)||(41632504-41632548)
chr7 (116-226)||(45265047-45265156)
[»] chr3 (48 HSPs)
chr3 (116-190)||(33217949-33218021)
chr3 (109-218)||(33647711-33647818)
chr3 (129-190)||(39932559-39932620)
chr3 (32-87)||(27823155-27823210)
chr3 (129-187)||(33497833-33497889)
chr3 (129-190)||(1246938-1246997)
chr3 (38-83)||(28124575-28124620)
chr3 (38-83)||(40908152-40908197)
chr3 (32-88)||(24784090-24784146)
chr3 (116-190)||(9320484-9320556)
chr3 (112-218)||(27823233-27823337)
chr3 (112-218)||(28139728-28139832)
chr3 (128-218)||(43132165-43132253)
chr3 (129-187)||(53165764-53165820)
chr3 (129-183)||(18460915-18460969)
chr3 (38-83)||(1099085-1099130)
chr3 (38-83)||(8476447-8476492)
chr3 (38-83)||(11239259-11239304)
chr3 (38-83)||(20297680-20297725)
chr3 (38-83)||(20414604-20414649)
chr3 (116-188)||(31435961-31436031)
chr3 (38-83)||(46359839-46359884)
chr3 (38-83)||(47114996-47115041)
chr3 (38-83)||(48339896-48339941)
chr3 (129-188)||(12228294-12228351)
chr3 (107-189)||(2565497-2565576)
chr3 (129-187)||(20297769-20297825)
chr3 (116-190)||(24574538-24574610)
chr3 (116-190)||(26848985-26849057)
chr3 (32-87)||(38140505-38140559)
chr3 (32-87)||(40584491-40584546)
chr3 (116-190)||(40908228-40908300)
chr3 (116-167)||(47114914-47114965)
chr3 (107-188)||(6231539-6231618)
chr3 (129-190)||(11239156-11239215)
chr3 (130-187)||(15880879-15880934)
chr3 (129-190)||(44952284-44952343)
chr3 (116-189)||(46359915-46359986)
chr3 (38-87)||(2565594-2565643)
chr3 (38-83)||(6231640-6231685)
chr3 (38-83)||(26848909-26848954)
chr3 (38-87)||(33218048-33218097)
chr3 (38-83)||(44952195-44952240)
chr3 (32-88)||(12931074-12931130)
chr3 (128-187)||(21925502-21925564)
chr3 (47-87)||(28770345-28770385)
chr3 (38-82)||(31611125-31611169)
chr3 (38-82)||(53165865-53165909)
[»] chr5 (36 HSPs)
chr5 (111-215)||(3913211-3913312)
chr5 (13-87)||(35348659-35348735)
chr5 (128-188)||(6930615-6930677)
chr5 (112-206)||(31583083-31583174)
chr5 (116-190)||(4765596-4765668)
chr5 (116-190)||(19065541-19065613)
chr5 (109-218)||(20962546-20962653)
chr5 (116-190)||(42012215-42012287)
chr5 (129-218)||(15200554-15200641)
chr5 (38-83)||(4765699-4765744)
chr5 (38-83)||(14206960-14207005)
chr5 (38-83)||(19065644-19065689)
chr5 (38-83)||(22936051-22936096)
chr5 (38-83)||(27481244-27481289)
chr5 (38-83)||(28602443-28602488)
chr5 (38-83)||(32535824-32535869)
chr5 (110-166)||(35602881-35602937)
chr5 (116-190)||(12970566-12970638)
chr5 (115-213)||(28429663-28429759)
chr5 (127-189)||(32535911-32535971)
chr5 (128-170)||(830074-830116)
chr5 (129-167)||(1664706-1664744)
chr5 (129-190)||(14206857-14206916)
chr5 (129-190)||(18412185-18412244)
chr5 (116-197)||(27481320-27481399)
chr5 (32-82)||(41783761-41783811)
chr5 (38-83)||(8406781-8406826)
chr5 (38-83)||(8646530-8646575)
chr5 (116-188)||(17251775-17251845)
chr5 (111-160)||(19089781-19089830)
chr5 (129-188)||(11855693-11855750)
chr5 (31-87)||(17251692-17251748)
chr5 (116-215)||(27480972-27481069)
chr5 (38-82)||(29543155-29543199)
chr5 (47-87)||(40275890-40275930)
chr5 (51-83)||(43347034-43347066)
[»] chr8 (33 HSPs)
chr8 (129-188)||(29421527-29421584)
chr8 (38-83)||(5020632-5020677)
chr8 (116-190)||(32660969-32661041)
chr8 (116-190)||(37392582-37392654)
chr8 (111-188)||(21137170-21137245)
chr8 (129-187)||(44161730-44161788)
chr8 (38-87)||(3049896-3049945)
chr8 (38-83)||(7931126-7931171)
chr8 (129-189)||(10896254-10896312)
chr8 (38-83)||(32661073-32661118)
chr8 (38-83)||(35818563-35818608)
chr8 (38-83)||(37392685-37392730)
chr8 (38-82)||(10896356-10896400)
chr8 (51-87)||(15226865-15226901)
chr8 (38-82)||(26062031-26062075)
chr8 (38-82)||(38363968-38364012)
chr8 (116-190)||(3049972-3050044)
chr8 (129-187)||(7317349-7317405)
chr8 (116-218)||(15226927-15227027)
chr8 (112-218)||(16218951-16219055)
chr8 (116-190)||(16313543-16313615)
chr8 (116-190)||(18298075-18298147)
chr8 (129-190)||(12710621-12710680)
chr8 (129-218)||(14763939-14764026)
chr8 (129-190)||(18726655-18726714)
chr8 (129-190)||(26601974-26602033)
chr8 (38-83)||(12710532-12710577)
chr8 (38-83)||(26602076-26602121)
chr8 (116-176)||(31117580-31117638)
chr8 (116-188)||(35394353-35394423)
chr8 (38-86)||(6805759-6805807)
chr8 (51-87)||(33444759-33444795)
chr8 (111-190)||(41432699-41432775)
[»] scaffold0702 (1 HSPs)
scaffold0702 (116-218)||(3573-3673)
[»] scaffold0662 (1 HSPs)
scaffold0662 (116-218)||(4431-4531)
[»] chr6 (14 HSPs)
chr6 (38-83)||(1316906-1316951)
chr6 (38-87)||(8029190-8029239)
chr6 (38-83)||(2657587-2657632)
chr6 (38-83)||(7344222-7344267)
chr6 (32-87)||(345966-346021)
chr6 (116-190)||(2657663-2657735)
chr6 (116-190)||(7053606-7053678)
chr6 (47-82)||(10849924-10849959)
chr6 (33-87)||(6705900-6705954)
chr6 (129-190)||(14170989-14171048)
chr6 (129-189)||(6705802-6705860)
chr6 (38-83)||(7053717-7053762)
chr6 (38-79)||(10246259-10246300)
chr6 (38-83)||(18897808-18897853)
[»] scaffold0189 (1 HSPs)
scaffold0189 (116-218)||(28960-29060)
[»] scaffold0006 (5 HSPs)
scaffold0006 (116-190)||(201888-201960)
scaffold0006 (33-87)||(143495-143549)
scaffold0006 (38-83)||(201812-201857)
scaffold0006 (116-195)||(119283-119360)
scaffold0006 (129-188)||(143589-143646)
[»] scaffold0238 (1 HSPs)
scaffold0238 (20-87)||(23431-23500)


Alignment Details
Target: chr2 (Bit Score: 275; Significance: 1e-153; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 275; E-Value: 1e-153
Query Start/End: Original strand, 13 - 411
Target Start/End: Original strand, 4685040 - 4685436
Alignment:
Q  13 aatatgaattataatagggttacacatgaatttgttcccatcttcatgggaactttattcacacccttttctttgannnnnnnnnnnctattgtcaagaa 112  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||           |||||| || |||    
T  4685040 aatatgaattataatagg-ttacacatgaatttgttcccatcttcatgggaactttattcacacccttttctttgatttttttttttctattgccaggaa 4685138  T
Q  113 acgttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccctaaaatctgcgaatatcacttg 212  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||  ||||||||||||||| || ||||| |||||||||||||||    
T  4685139 acgttttatactctgaaataaaatttaataaatttataacaaacataaacatgtatat--ttctatcattttatttccaaaaatatgcgaatatcacttg 4685236  T
Q  213 aaacaa-cacaccttgggtaataaacatggaaccaaaatttcctttnnnnnnntggaaccaaaattttcattaagttactggtagttgttacaacttaca 311  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||| |||||||||||||||||||    
T  4685237 aaacaaacacaccttaggtaataaacatggaaccaaaatttcctttaaaaaaatggaaccaaaattttcattaagttacttgtagttgttacaacttaca 4685336  T
Q  312 agtatgaaatattttacactatctatgcatcaataaacaataaaattgtatatgatctttgattcaataaattagtaaatttatccttctcgtaaggtaa 411  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  4685337 agtatgaaatattttacactatctatgcatcaataaacaataaaattgtatatgatctttgattcaataaattagtaaatttatccttctcataaggtaa 4685436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 37851717 - 37851793
Alignment:
Q  13 aatatgaattataatagg--gttacacatgaatttgttcccatcttcatgggaactttattcacacccttttctttg 87  Q
    ||||||||||||||||||  ||||||||||||||| ||| |||||||||||||||||||||| |||| |||||||||    
T  37851717 aatatgaattataataggtagttacacatgaatttattctcatcttcatgggaactttattctcaccattttctttg 37851793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 127 - 190
Target Start/End: Original strand, 1988285 - 1988346
Alignment:
Q  127 gaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccc 190  Q
    |||||||||||||||||| |||||||||||||| ||  || |||||||||||||||||||||||    
T  1988285 gaaataaaatttaataaacttgtaacaaacataggc--atgtatatttctatcattttattccc 1988346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 111 - 190
Target Start/End: Original strand, 14253480 - 14253557
Alignment:
Q  111 aaacgttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccc 190  Q
    |||| |||||||||| | ||||||||||| |||| ||||||||||||||   | ||||||||||||||||||||||||||    
T  14253480 aaacattttatactcgggaataaaatttagtaaacttgtaacaaacata--gacatatatatttctatcattttattccc 14253557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 112 - 218
Target Start/End: Original strand, 45694147 - 45694251
Alignment:
Q  112 aacgttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccctaaaatctgcgaatatcactt 211  Q
    |||||||||||| | | ||||||||||| |||| ||||||||||||||  ||| | |||  | ||||||||||||||||  |||||| ||||||| ||||    
T  45694147 aacgttttatacccgggaataaaatttagtaaacttgtaacaaacatagacatgtgtat--tcctatcattttattcccagaaatctacgaatataactt 45694244  T
Q  212 gaaacaa 218  Q
    |||||||    
T  45694245 gaaacaa 45694251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 40950954 - 40950895
Alignment:
Q  129 aataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccc 190  Q
    |||||| |||| |||| |||||||||||||||||||||  ||||||||||||||||||||||    
T  40950954 aataaattttagtaaacttgtaacaaacataagcatat--atatttctatcattttattccc 40950895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 38 - 87
Target Start/End: Original strand, 26310154 - 26310203
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttctttg 87  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||||||    
T  26310154 atgaatttattcccatctccatgggaactttattcccacccttttctttg 26310203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 38 - 82
Target Start/End: Original strand, 11071492 - 11071536
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacaccctttt 82  Q
    |||||||| |||||||||||||||||||||||||| |||||||||    
T  11071492 atgaatttattcccatcttcatgggaactttattcccaccctttt 11071536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 346453 - 346381
Alignment:
Q  116 ttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccc 190  Q
    |||||||| | | |||||||||||||||| |||||||||||||| ||  ||||| ||| ||||||||||||||||    
T  346453 ttttatacccgggaataaaatttaataaacttgtaacaaacataggc--atatacattcctatcattttattccc 346381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 32 - 87
Target Start/End: Original strand, 4875657 - 4875712
Alignment:
Q  32 ttacacatgaatttgttcccatcttcatgggaactttattcacacccttttctttg 87  Q
    ||||| |||||||| ||| |||||||||||||||||||||| ||||| ||||||||    
T  4875657 ttacatatgaatttattctcatcttcatgggaactttattcccacccgtttctttg 4875712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 49 - 87
Target Start/End: Complemental strand, 8868834 - 8868796
Alignment:
Q  49 cccatcttcatgggaactttattcacacccttttctttg 87  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  8868834 cccatcttcatgggaactttattcccacccttttctttg 8868796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 346529 - 346484
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||    
T  346529 atgaatttattcccatctccatgggaactttattcccacccttttc 346484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 2050753 - 2050798
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||    
T  2050753 atgaatttattcccatctccatgggaactttattcccacccttttc 2050798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 4559446 - 4559491
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||    
T  4559446 atgaatttattcccatctccatgggaactttattcccacccttttc 4559491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 9734030 - 9733985
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||    
T  9734030 atgaatttattcccatctccatgggaactttattcccacccttttc 9733985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 13760854 - 13760899
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||    
T  13760854 atgaatttattcccatctccatgggaactttattcccacccttttc 13760899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 129 - 189
Target Start/End: Original strand, 14832786 - 14832844
Alignment:
Q  129 aataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattcc 189  Q
    ||||||||||| |||| || ||||||||||| ||  |||||||||||||||||||||||||    
T  14832786 aataaaatttagtaaacttttaacaaacataggc--atatatatttctatcattttattcc 14832844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 37233316 - 37233361
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||    
T  37233316 atgaatttattcccatctccatgggaactttattcccacccttttc 37233361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 87
Target Start/End: Original strand, 37533839 - 37533888
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttctttg 87  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||| ||||    
T  37533839 atgaatttattcccatctccatgggaactttattcccacccttttttttg 37533888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 41750416 - 41750461
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||    
T  41750416 atgaatttattcccatctccatgggaactttattcccacccttttc 41750461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 129 - 188
Target Start/End: Original strand, 3902432 - 3902489
Alignment:
Q  129 aataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattc 188  Q
    ||||||||||| |||| |||||||||||||| |  | |||||||||||||||||||||||    
T  3902432 aataaaatttagtaaacttgtaacaaacatatg--tctatatatttctatcattttattc 3902489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 38 - 82
Target Start/End: Complemental strand, 5770294 - 5770250
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacaccctttt 82  Q
    |||||||| |||||||||||||||||||||||||| |||| ||||    
T  5770294 atgaatttattcccatcttcatgggaactttattcccaccatttt 5770250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 116 - 187
Target Start/End: Complemental strand, 18713765 - 18713696
Alignment:
Q  116 ttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttatt 187  Q
    |||||||| | | ||||||||||| |||| |||||||||||||| ||  |||||||||| ||||||||||||    
T  18713765 ttttatacccgggaataaaatttagtaaacttgtaacaaacataggc--atatatatttatatcattttatt 18713696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 5770218 - 5770146
Alignment:
Q  116 ttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccc 190  Q
    |||||||| | | ||||||||||| |||| |||||||||||||| ||  ||||| ||| ||||||||||||||||    
T  5770218 ttttatacccgggaataaaatttagtaaacttgtaacaaacataggc--atatacattcctatcattttattccc 5770146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 129 - 187
Target Start/End: Original strand, 6571663 - 6571719
Alignment:
Q  129 aataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttatt 187  Q
    ||||||||||| |||| |||||||||||||| ||  ||||||||| |||||||||||||    
T  6571663 aataaaatttagtaaacttgtaacaaacataggc--atatatattcctatcattttatt 6571719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 218
Target Start/End: Original strand, 11071568 - 11071668
Alignment:
Q  116 ttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccctaaaatctgcgaatatcacttgaaa 215  Q
    |||||||| | | ||||||||||| |||| |||||||||||||| ||||||| ||  | ||||||||||||||||  |||||  | | ||| ||||||||    
T  11071568 ttttatacccgggaataaaatttagtaaacttgtaacaaacataggcatatacat--tcctatcattttattcccggaaatcaacaattataacttgaaa 11071665  T
Q  216 caa 218  Q
    |||    
T  11071666 caa 11071668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 129 - 223
Target Start/End: Complemental strand, 11763466 - 11763374
Alignment:
Q  129 aataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccctaaaatctgcgaatatcacttgaaacaacacac 223  Q
    ||||||||||| ||||||| |||||||||||   | ||||||||| ||||||||| |||||| |||| |  | ||||| |||||||| |||||||    
T  11763466 aataaaatttagtaaatttataacaaacata--gacatatatattcctatcatttcattcccgaaaaacaacaaatataacttgaaaaaacacac 11763374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 28311805 - 28311733
Alignment:
Q  116 ttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccc 190  Q
    |||||||| | | ||||||||| | |||| |||||||||||||| ||  ||||||||| ||||||||||||||||    
T  28311805 ttttatacccgggaataaaattcagtaaacttgtaacaaacataggc--atatatattcctatcattttattccc 28311733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 190
Target Start/End: Original strand, 37233392 - 37233464
Alignment:
Q  116 ttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccc 190  Q
    |||||||| | | ||||||||||| |||| |||||||||||||| ||  |||||| || ||||||||||||||||    
T  37233392 ttttatacccgggaataaaatttagtaaacttgtaacaaacataggc--atatatgttcctatcattttattccc 37233464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 9733941 - 9733882
Alignment:
Q  129 aataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccc 190  Q
    |||||| |||| |||| |||||||||||||| ||  ||||| ||||||||||||||||||||    
T  9733941 aataaattttagtaaacttgtaacaaacataggc--atatacatttctatcattttattccc 9733882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 129 - 159
Target Start/End: Original strand, 13539644 - 13539674
Alignment:
Q  129 aataaaatttaataaatttgtaacaaacata 159  Q
    |||||||||||||||||||||||||||||||    
T  13539644 aataaaatttaataaatttgtaacaaacata 13539674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 41 - 87
Target Start/End: Complemental strand, 18713838 - 18713792
Alignment:
Q  41 aatttgttcccatcttcatgggaactttattcacacccttttctttg 87  Q
    ||||| || |||||| |||||||||||||||| ||||||||||||||    
T  18713838 aatttatttccatctccatgggaactttattcccacccttttctttg 18713792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 38 - 88
Target Start/End: Original strand, 23944050 - 23944100
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttctttga 88  Q
    |||||||| ||| ||||| |||||||||||||||| |||||||||| ||||    
T  23944050 atgaatttattctcatctccatgggaactttattcccacccttttcgttga 23944100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 37192498 - 37192557
Alignment:
Q  129 aataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccc 190  Q
    |||||| ||||||||| ||||||||||||||   | ||||| ||||||||||||||||||||    
T  37192498 aataaattttaataaacttgtaacaaacata--gacatatacatttctatcattttattccc 37192557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 39995226 - 39995167
Alignment:
Q  129 aataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccc 190  Q
    ||||||||||| |||| |||||||||||||| ||  ||||| ||| ||||||||||||||||    
T  39995226 aataaaatttagtaaacttgtaacaaacataggc--atatacattcctatcattttattccc 39995167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 129 - 218
Target Start/End: Complemental strand, 41298013 - 41297926
Alignment:
Q  129 aataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccctaaaatctgcgaatatcacttgaaacaa 218  Q
    |||||||||||||||| |||||||| ||||||  || | ||||||||| |||||||||||   | ||||| ||||||| | |||||||||    
T  41298013 aataaaatttaataaacttgtaacatacataa--atttgtatatttctttcattttattcataagaatctacgaatataatttgaaacaa 41297926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 129 - 159
Target Start/End: Original strand, 45693103 - 45693133
Alignment:
Q  129 aataaaatttaataaatttgtaacaaacata 159  Q
    |||||||||||||||||||||||||||||||    
T  45693103 aataaaatttaataaatttgtaacaaacata 45693133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 116 - 188
Target Start/End: Original strand, 2050829 - 2050899
Alignment:
Q  116 ttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattc 188  Q
    |||||||| | | ||||||||||| |||| |||||||||||||| |  |||||| ||| ||||||||||||||    
T  2050829 ttttatacccgggaataaaatttagtaaacttgtaacaaacatagg--tatatacattcctatcattttattc 2050899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 5003047 - 5002971
Alignment:
Q  13 aatatgaattataatagg--gttacacatgaatttgttcccatcttcatgggaactttattcacacccttttctttg 87  Q
    |||||| |||||||||||  ||||||||||||||  |||  |||||||||| |||||||||| |||| | |||||||    
T  5003047 aatatggattataataggtagttacacatgaattgattcatatcttcatggaaactttattcccaccatattctttg 5002971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 6171678 - 6171723
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||||||||| |||||||||||||||| |||| |||||    
T  6171678 atgaatttattcccatctccatgggaactttattcccaccattttc 6171723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 116 - 188
Target Start/End: Original strand, 6171754 - 6171824
Alignment:
Q  116 ttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattc 188  Q
    |||||||| | | ||||||||||| |||| |||||||||||||| ||  ||||| ||| ||||||||||||||    
T  6171754 ttttatacccgggaataaaatttagtaaacttgtaacaaacataggc--atatacattcctatcattttattc 6171824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 190
Target Start/End: Complemental strand, 20426577 - 20426519
Alignment:
Q  130 ataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccc 190  Q
    |||||||||| |||| |||||||||||||| ||  ||||| ||| ||||||||||||||||    
T  20426577 ataaaatttagtaaacttgtaacaaacataggc--atataaattcctatcattttattccc 20426519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 21737592 - 21737547
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||||||||| |||||||||||||||| |||| |||||    
T  21737592 atgaatttattcccatctccatgggaactttattcccaccattttc 21737547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 26310243 - 26310304
Alignment:
Q  129 aataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccc 190  Q
    |||||| ||||||||| || |||||||||||   | ||||| ||||||||||||||||||||    
T  26310243 aataaattttaataaacttctaacaaacatatagacatatacatttctatcattttattccc 26310304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 28311881 - 28311836
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||||||||| || ||||||||||||| ||||||||||    
T  28311881 atgaatttattcccatctccacgggaactttattcccacccttttc 28311836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 40951043 - 40950998
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||| ||||| |||||||||||||||| ||||||||||    
T  40951043 atgaatttattctcatctccatgggaactttattcccacccttttc 40950998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 87
Target Start/End: Complemental strand, 41298102 - 41298053
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttctttg 87  Q
    |||||| | ||| |||||||||| |||||||||||||||||||| |||||    
T  41298102 atgaatatattctcatcttcatgagaactttattcacaccctttgctttg 41298053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 189
Target Start/End: Original strand, 41750505 - 41750563
Alignment:
Q  129 aataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattcc 189  Q
    |||||| |||| |||| |||||||||||||| ||  ||||| |||||||||||||||||||    
T  41750505 aataaattttagtaaacttgtaacaaacataggc--atatacatttctatcattttattcc 41750563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 45409137 - 45409182
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| || |||||| |||||||||||||||| ||||||||||    
T  45409137 atgaatttatttccatctccatgggaactttattcccacccttttc 45409182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 72
Target Start/End: Original strand, 13539549 - 13539589
Alignment:
Q  32 ttacacatgaatttgttcccatcttcatgggaactttattc 72  Q
    |||||||||||| | ||||||| ||||||||||||||||||    
T  13539549 ttacacatgaatctattcccatgttcatgggaactttattc 13539589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 38 - 82
Target Start/End: Original strand, 17965870 - 17965914
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacaccctttt 82  Q
    |||||||| |||||||||  ||||||||||||||| |||||||||    
T  17965870 atgaatttattcccatctctatgggaactttattcccaccctttt 17965914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 25724925 - 25724961
Alignment:
Q  51 catcttcatgggaactttattcacacccttttctttg 87  Q
    |||||||||| ||||||||||| ||||||||||||||    
T  25724925 catcttcatgagaactttattcccacccttttctttg 25724961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 107 - 218
Target Start/End: Original strand, 37533906 - 37534015
Alignment:
Q  107 caagaaacgttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccctaaaatctgcgaatat 206  Q
    |||| ||| |||||||| | | ||||||||||| |||| ||||||||||||||  |||||| ||  | ||||||||||||||||  |||||  | | |||    
T  37533906 caaggaacattttatacccaggaataaaatttagtaaacttgtaacaaacatagacatatacat--tcctatcattttattcccggaaatcaacaattat 37534003  T
Q  207 cacttgaaacaa 218  Q
     |||||||||||    
T  37534004 aacttgaaacaa 37534015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 38 - 82
Target Start/End: Complemental strand, 42674845 - 42674801
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacaccctttt 82  Q
    |||||||| ||||||| | |||||||||||||||| |||||||||    
T  42674845 atgaatttattcccatttccatgggaactttattcccaccctttt 42674801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 2e-19; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 18094112 - 18094188
Alignment:
Q  13 aatatgaattataatagg--gttacacatgaatttgttcccatcttcatgggaactttattcacacccttttctttg 87  Q
    ||||||||||||||||||  ||||||||||||||| ||| |||||||||||||||||||||| |||| |||||||||    
T  18094112 aatatgaattataataggtagttacacatgaatttattctcatcttcatgggaactttattctcaccattttctttg 18094188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 25916217 - 25916172
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| |||||||||||||||||||||||||| ||||||||||    
T  25916217 atgaatttattcccatcttcatgggaactttattcccacccttttc 25916172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 31 - 86
Target Start/End: Original strand, 7258847 - 7258902
Alignment:
Q  31 gttacacatgaatttgttcccatcttcatgggaactttattcacacccttttcttt 86  Q
    |||||| |||||||| ||||||| |||||||||||||||||| ||| |||||||||    
T  7258847 gttacaaatgaatttattcccatattcatgggaactttattcccactcttttcttt 7258902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 13230097 - 13230025
Alignment:
Q  116 ttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccc 190  Q
    |||||||| | | ||||||||||| |||| |||||||||||||| ||  ||||| ||||||||||||||||||||    
T  13230097 ttttatacccgggaataaaatttagtaaacttgtaacaaacataggc--atatacatttctatcattttattccc 13230025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 112 - 218
Target Start/End: Original strand, 51968740 - 51968844
Alignment:
Q  112 aacgttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccctaaaatctgcgaatatcactt 211  Q
    ||||||||||||||   |||||||||||  ||| |||||||||||||| ||||  ||||  ||||||| ||||||||||  |||| | ||||||| ||||    
T  51968740 aacgttttatactcaagaataaaatttagcaaacttgtaacaaacataggcatgcatat--ttctatctttttattcccagaaatttacgaatataactt 51968837  T
Q  212 gaaacaa 218  Q
    |||||||    
T  51968838 gaaacaa 51968844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 129 - 218
Target Start/End: Complemental strand, 10400900 - 10400813
Alignment:
Q  129 aataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccctaaaatctgcgaatatcacttgaaacaa 218  Q
    ||||||||||| |||| |||||| |||||||  |||||| ||  |||||||||||||||||| ||||||  | ||||| |||||||||||    
T  10400900 aataaaatttagtaaacttgtaataaacatagacatatacat--ttctatcattttattcccaaaaatcaacaaatataacttgaaacaa 10400813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 32 - 86
Target Start/End: Original strand, 18405638 - 18405692
Alignment:
Q  32 ttacacatgaatttgttcccatcttcatgggaactttattcacacccttttcttt 86  Q
    ||||||||| |||| |||||||||| ||| ||||||||||| |||||||||||||    
T  18405638 ttacacatggatttattcccatcttaatgagaactttattcccacccttttcttt 18405692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 23686767 - 23686826
Alignment:
Q  129 aataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccc 190  Q
    |||||| |||| |||| |||||||||||||| ||  ||||||||||||||||||||||||||    
T  23686767 aataaattttagtaaacttgtaacaaacataggc--atatatatttctatcattttattccc 23686826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 129 - 218
Target Start/End: Original strand, 45596248 - 45596335
Alignment:
Q  129 aataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccctaaaatctgcgaatatcacttgaaacaa 218  Q
    |||||| |||| |||| |||||||||||||| ||||||| ||  |||||||||||||||||| ||||||  | | ||| |||||||||||    
T  45596248 aataaattttagtaaacttgtaacaaacataggcatatacat--ttctatcattttattcccgaaaatcaacaattataacttgaaacaa 45596335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 13230173 - 13230128
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||    
T  13230173 atgaatttattcccatctccatgggaactttattcccacccttttc 13230128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 23686678 - 23686723
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||    
T  23686678 atgaatttattcccatctccatgggaactttattcccacccttttc 23686723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 25932332 - 25932377
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||    
T  25932332 atgaatttattcccatctccatgggaactttattcccacccttttc 25932377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 27555317 - 27555362
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||    
T  27555317 atgaatttattcccatctccatgggaactttattcccacccttttc 27555362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 27763083 - 27763038
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||    
T  27763083 atgaatttattcccatctccatgggaactttattcccacccttttc 27763038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 35999577 - 35999622
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||    
T  35999577 atgaatttattcccatctccatgggaactttattcccacccttttc 35999622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 41859230 - 41859185
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||    
T  41859230 atgaatttattcccatctccatgggaactttattcccacccttttc 41859185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 42773839 - 42773884
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||    
T  42773839 atgaatttattcccatctccatgggaactttattcccacccttttc 42773884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 48519075 - 48519030
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||    
T  48519075 atgaatttattcccatctccatgggaactttattcccacccttttc 48519030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 48873912 - 48873957
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||    
T  48873912 atgaatttattcccatctccatgggaactttattcccacccttttc 48873957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 48879216 - 48879261
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||    
T  48879216 atgaatttattcccatctccatgggaactttattcccacccttttc 48879261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 50673089 - 50673044
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||    
T  50673089 atgaatttattcccatctccatgggaactttattcccacccttttc 50673044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 129 - 184
Target Start/End: Complemental strand, 12276006 - 12275953
Alignment:
Q  129 aataaaatttaataaatttgtaacaaacataagcatatatatatttctatcatttt 184  Q
    ||||||||||| |||| |||||||||||||||  | ||||||||||||||||||||    
T  12276006 aataaaatttagtaaacttgtaacaaacataa--acatatatatttctatcatttt 12275953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 35 - 87
Target Start/End: Complemental strand, 32384581 - 32384529
Alignment:
Q  35 cacatgaatttgttcccatcttcatgggaactttattcacacccttttctttg 87  Q
    ||||| |||||||||| ||||| ||||||| ||||||| ||||||||||||||    
T  32384581 cacataaatttgttccaatctttatgggaattttattcccacccttttctttg 32384529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 36858567 - 36858511
Alignment:
Q  32 ttacacatgaatttgttcccatcttcatgggaactttattcacacccttttctttga 88  Q
    ||||| ||||| || ||| |||||||||||||||||||||| ||||||||| |||||    
T  36858567 ttacatatgaaattattctcatcttcatgggaactttattcccacccttttatttga 36858511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 190
Target Start/End: Complemental strand, 41744317 - 41744256
Alignment:
Q  127 gaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccc 190  Q
    |||||||| |||| |||| |||||||||||||| ||  ||||| ||||||||||||||||||||    
T  41744317 gaaataaattttagtaaacttgtaacaaacataggc--atatacatttctatcattttattccc 41744256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 38 - 82
Target Start/End: Complemental strand, 55968184 - 55968140
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacaccctttt 82  Q
    |||||||| ||||||||| |||||||||||||||| |||||||||    
T  55968184 atgaatttattcccatctccatgggaactttattcccaccctttt 55968140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 218
Target Start/End: Complemental strand, 24805181 - 24805093
Alignment:
Q  128 aaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccctaaaatctgcgaatatcacttgaaacaa 218  Q
    |||||||||||| ||||||||||||||||||||  | || ||||||| | || |||||||| |  |||||| |||| || |||||||||||    
T  24805181 aaataaaatttagtaaatttgtaacaaacataa--acatgtatatttttttcgttttattctcagaaatctacgaaaataacttgaaacaa 24805093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 87
Target Start/End: Complemental strand, 37014575 - 37014520
Alignment:
Q  32 ttacacatgaatttgttcccatcttcatgggaactttattcacacccttttctttg 87  Q
    |||||||||||||| ||| |||||||||| ||||||||||  ||| ||||||||||    
T  37014575 ttacacatgaatttattctcatcttcatgagaactttatttccactcttttctttg 37014520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 45747904 - 45747832
Alignment:
Q  116 ttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccc 190  Q
    |||||||| | | ||||||||||| |||| |||||||||||||| ||  ||||| ||| ||||||||||||||||    
T  45747904 ttttatacccgggaataaaatttagtaaacttgtaacaaacataggc--atatacattcctatcattttattccc 45747832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 171
Target Start/End: Original strand, 48060034 - 48060077
Alignment:
Q  128 aaataaaatttaataaatttgtaacaaacataagcatatatata 171  Q
    ||||||||||||||||| | ||||||||||||| ||||||||||    
T  48060034 aaataaaatttaataaactcgtaacaaacataaacatatatata 48060077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 129 - 218
Target Start/End: Original strand, 35999666 - 35999753
Alignment:
Q  129 aataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccctaaaatctgcgaatatcacttgaaacaa 218  Q
    |||||| |||| |||| |||||||||||||| ||||||| ||  |||||||||||||||||| | ||||  | | ||| |||||||||||    
T  35999666 aataaattttagtaaacttgtaacaaacataggcatatacat--ttctatcattttattcccgagaatcaacaattataacttgaaacaa 35999753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 40435880 - 40435939
Alignment:
Q  129 aataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccc 190  Q
    |||||| |||| |||| |||||||||||||| ||  ||||| ||||||||||||||||||||    
T  40435880 aataaattttagtaaacttgtaacaaacataggc--atatacatttctatcattttattccc 40435939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 48518986 - 48518927
Alignment:
Q  129 aataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccc 190  Q
    ||||||||||| |||| |||||||||||||| ||  ||||| ||| ||||||||||||||||    
T  48518986 aataaaatttagtaaacttgtaacaaacataggc--atatacattcctatcattttattccc 48518927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 48879305 - 48879364
Alignment:
Q  129 aataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccc 190  Q
    |||||| |||| |||| |||||||||||||| ||  ||||| ||||||||||||||||||||    
T  48879305 aataaattttagtaaacttgtaacaaacataggc--atatacatttctatcattttattccc 48879364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 32 - 82
Target Start/End: Original strand, 51968661 - 51968711
Alignment:
Q  32 ttacacatgaatttgttcccatcttcatgggaactttattcacaccctttt 82  Q
    ||||| ||||| || || ||||||||||||||||||||||| |||||||||    
T  51968661 ttacatatgaaattatttccatcttcatgggaactttattcccaccctttt 51968711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 6280105 - 6280060
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||||||||| |||| ||||||||||| ||||||||||    
T  6280105 atgaatttattcccatctccatgagaactttattcccacccttttc 6280060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 8322136 - 8322181
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||| ||||| |||||||||||||||| ||||||||||    
T  8322136 atgaatttattctcatctccatgggaactttattcccacccttttc 8322181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 18405417 - 18405372
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||| ||||| |||||||||||||||| ||||||||||    
T  18405417 atgaatttattctcatctccatgggaactttattctcacccttttc 18405372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 189
Target Start/End: Original strand, 25932421 - 25932479
Alignment:
Q  129 aataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattcc 189  Q
    |||||| |||| |||| |||||||||||||| ||  ||||| |||||||||||||||||||    
T  25932421 aataaattttagtaaacttgtaacaaacataggc--atatacatttctatcattttattcc 25932479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 34238138 - 34238093
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||| ||||| |||||||||||||||| ||||||||||    
T  34238138 atgaatttattctcatctccatgggaactttattcccacccttttc 34238093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 87
Target Start/End: Original strand, 36858297 - 36858346
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttctttg 87  Q
    |||||||| ||||||||| |||| ||| ||||||| ||||||||||||||    
T  36858297 atgaatttattcccatctccatgagaattttattcccacccttttctttg 36858346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 170
Target Start/End: Original strand, 38394886 - 38394927
Alignment:
Q  129 aataaaatttaataaatttgtaacaaacataagcatatatat 170  Q
    ||||||||||| |||| ||||||||||||||||||| |||||    
T  38394886 aataaaatttagtaaacttgtaacaaacataagcatgtatat 38394927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 39730477 - 39730432
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||||||||| |||| ||||||||||| ||||||||||    
T  39730477 atgaatttattcccatctccatgtgaactttattcccacccttttc 39730432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 40435791 - 40435836
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| |||||||||  ||||||||||||||| ||||||||||    
T  40435791 atgaatttattcccatctctatgggaactttattcccacccttttc 40435836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 43723155 - 43723200
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||| ||||| |||||||||||||||| ||||||||||    
T  43723155 atgaatttattctcatctccatgggaactttattctcacccttttc 43723200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 45596159 - 45596204
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||||||| | |||||||||||||||| ||||||||||    
T  45596159 atgaatttattcccatttccatgggaactttattcccacccttttc 45596204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 188
Target Start/End: Complemental strand, 47426338 - 47426278
Alignment:
Q  127 gaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattc 188  Q
    ||||||||||||| |||| ||||||||||||||  |||||| |||||  |||||||||||||    
T  47426338 gaaataaaatttagtaaacttgtaacaaacatagacatata-atattcatatcattttattc 47426278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 38 - 82
Target Start/End: Complemental strand, 31938054 - 31938010
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacaccctttt 82  Q
    |||||||| ||| ||||| |||||||||||||||| |||||||||    
T  31938054 atgaatttattctcatctccatgggaactttattcccaccctttt 31938010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 129 - 188
Target Start/End: Original strand, 33900982 - 33901039
Alignment:
Q  129 aataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattc 188  Q
    ||||||||||||||||||| ||||||||||||    ||| | ||||||||||||||||||    
T  33900982 aataaaatttaataaatttataacaaacataa--taatacacatttctatcattttattc 33901039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 116 - 187
Target Start/End: Complemental strand, 34049705 - 34049636
Alignment:
Q  116 ttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttatt 187  Q
    |||||||| ||| ||||||||||| |||| ||||||||||||||   | ||||| ||| |||||||||||||    
T  34049705 ttttataccctggaataaaatttagtaaacttgtaacaaacata--gacatatacattcctatcattttatt 34049636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 38 - 82
Target Start/End: Complemental strand, 34049781 - 34049737
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacaccctttt 82  Q
    |||||||| ||||||||| |||||||||||||||| |||| ||||    
T  34049781 atgaatttattcccatctccatgggaactttattcccaccatttt 34049737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 127 - 159
Target Start/End: Original strand, 52469676 - 52469708
Alignment:
Q  127 gaaataaaatttaataaatttgtaacaaacata 159  Q
    |||||||||||||||||| ||||||||||||||    
T  52469676 gaaataaaatttaataaacttgtaacaaacata 52469708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 1e-17; HSPs: 64)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 129 - 218
Target Start/End: Original strand, 30240986 - 30241073
Alignment:
Q  129 aataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccctaaaatctgcgaatatcacttgaaacaa 218  Q
    |||||||||||||||| |||||||||||||| ||  ||||||||||||||||||||||| || ||||||  | ||||| |||||||||||    
T  30240986 aataaaatttaataaacttgtaacaaacataggc--atatatatttctatcattttattaccaaaaatcaacaaatataacttgaaacaa 30241073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 10 - 206
Target Start/End: Original strand, 13440252 - 13440447
Alignment:
Q  10 aagaatatgaattataatagg--gttacacatgaatttgttcccatcttcatgggaactttattcacacccttttctttgannnnnnnnnnnctattgtc 107  Q
    ||||||||| |||||||||||  |||||| |||||||| ||| ||||||||||| |||||||||  ||||||||||||||            ||||| ||    
T  13440252 aagaatatggattataataggtagttacatatgaatttattctcatcttcatggaaactttatttccacccttttctttggaatttttttttctattctc 13440351  T
Q  108 aagaaacgttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccctaaaatctgcgaatat 206  Q
     || ||| ||||||||||   ||||||||||| |||| || |||||||||||  |  || ||||||||||||||| ||||||| ||||||| |||||||    
T  13440352 -aggaacattttatactcgtgaataaaatttagtaaaattctaacaaacatagtc--atttatatttctatcattgtattcccaaaaatctacgaatat 13440447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 52699677 - 52699601
Alignment:
Q  13 aatatgaattataataggg--ttacacatgaatttgttcccatcttcatgggaactttattcacacccttttctttg 87  Q
    |||| |||||||||||||   |||| ||||||||| ||||||||| |||||||||||||||| ||||||||||||||    
T  52699677 aataggaattataataggaaattactcatgaatttattcccatctccatgggaactttattcccacccttttctttg 52699601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 128 - 187
Target Start/End: Complemental strand, 33702438 - 33702381
Alignment:
Q  128 aaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttatt 187  Q
    ||||||||||||||||||||||||||||| ||||   |||||||||||||||||||||||    
T  33702438 aaataaaatttaataaatttgtaacaaacttaag--aatatatatttctatcattttatt 33702381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 32 - 87
Target Start/End: Complemental strand, 31806944 - 31806889
Alignment:
Q  32 ttacacatgaatttgttcccatcttcatgggaactttattcacacccttttctttg 87  Q
    |||||||||||||||||| |||||||||||||||||||||  ||||||||| ||||    
T  31806944 ttacacatgaatttgttctcatcttcatgggaactttatttccacccttttatttg 31806889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 116 - 189
Target Start/End: Complemental strand, 5518612 - 5518541
Alignment:
Q  116 ttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattcc 189  Q
    |||||||| | | ||||||||||| |||| |||||||||||||| ||  |||||||||||||||||||||||||    
T  5518612 ttttatacccgggaataaaatttagtaaacttgtaacaaacataggc--atatatatttctatcattttattcc 5518541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 32824809 - 32824854
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| |||||||||||||||||||||||||| ||||||||||    
T  32824809 atgaatttattcccatcttcatgggaactttattcccacccttttc 32824854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 38 - 82
Target Start/End: Complemental strand, 1597526 - 1597482
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacaccctttt 82  Q
    |||||||| |||||||||||||||||||||||||| |||||||||    
T  1597526 atgaatttattcccatcttcatgggaactttattcccaccctttt 1597482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 3572673 - 3572601
Alignment:
Q  116 ttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccc 190  Q
    |||||||| | | |||||||||||||||| |||||||||||||| ||  ||||| ||| ||||||||||||||||    
T  3572673 ttttatacccgggaataaaatttaataaacttgtaacaaacataggc--atatacattcctatcattttattccc 3572601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 116 - 218
Target Start/End: Complemental strand, 19083213 - 19083113
Alignment:
Q  116 ttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccctaaaatctgcgaatatcacttgaaa 215  Q
    ||||||||||   ||||||||||| |||| || |||||||||||  ||| |||||  |||||||||| ||||||| ||||||| ||||||| | ||||||    
T  19083213 ttttatactcgtgaataaaatttagtaaacttataacaaacatagacatgtatat--ttctatcattgtattcccaaaaatctacgaatataatttgaaa 19083116  T
Q  216 caa 218  Q
    |||    
T  19083115 caa 19083113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 116 - 218
Target Start/End: Complemental strand, 19131101 - 19131001
Alignment:
Q  116 ttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccctaaaatctgcgaatatcacttgaaa 215  Q
    ||||||||||   ||||||||||| |||| || |||||||||||  ||| |||||  |||||||||| ||||||| ||||||| ||||||| | ||||||    
T  19131101 ttttatactcgtgaataaaatttagtaaacttataacaaacatagacatgtatat--ttctatcattgtattcccaaaaatctacgaatataatttgaaa 19131004  T
Q  216 caa 218  Q
    |||    
T  19131003 caa 19131001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 112 - 218
Target Start/End: Complemental strand, 52699578 - 52699474
Alignment:
Q  112 aacgttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccctaaaatctgcgaatatcactt 211  Q
    |||||||||||| | | ||||||||| | |||| |||||||||||||| |||| | |||  | ||||||||||||||||   ||||| ||||||| ||||    
T  52699578 aacgttttatacccgggaataaaattcagtaaacttgtaacaaacataggcatgtgtat--tcctatcattttattcccaggaatctacgaatataactt 52699481  T
Q  212 gaaacaa 218  Q
    |||||||    
T  52699480 gaaacaa 52699474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 47037434 - 47037493
Alignment:
Q  129 aataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccc 190  Q
    |||||| |||| |||| |||||||||||||| ||  ||||||||||||||||||||||||||    
T  47037434 aataaattttagtaaacttgtaacaaacataggc--atatatatttctatcattttattccc 47037493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 38 - 88
Target Start/End: Original strand, 52630661 - 52630711
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttctttga 88  Q
    |||||||| ||| ||||| |||||||||||||||| |||||||||||||||    
T  52630661 atgaatttattctcatctccatgggaactttattcccacccttttctttga 52630711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 2430384 - 2430429
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||    
T  2430384 atgaatttattcccatctccatgggaactttattcccacccttttc 2430429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 3572749 - 3572704
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||    
T  3572749 atgaatttattcccatctccatgggaactttattcccacccttttc 3572704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 9115725 - 9115770
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||    
T  9115725 atgaatttattcccatctccatgggaactttattcccacccttttc 9115770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 9832054 - 9832009
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||    
T  9832054 atgaatttattcccatctccatgggaactttattcccacccttttc 9832009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 12190361 - 12190316
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| |||||||||||||||||||||||||| |||| |||||    
T  12190361 atgaatttattcccatcttcatgggaactttattcccaccattttc 12190316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 14788611 - 14788656
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||    
T  14788611 atgaatttattcccatctccatgggaactttattcccacccttttc 14788656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 20260270 - 20260225
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||    
T  20260270 atgaatttattcccatctccatgggaactttattcccacccttttc 20260225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 25789651 - 25789696
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||    
T  25789651 atgaatttattcccatctccatgggaactttattcccacccttttc 25789696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 32202497 - 32202452
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||    
T  32202497 atgaatttattcccatctccatgggaactttattcccacccttttc 32202452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 87
Target Start/End: Complemental strand, 37436804 - 37436755
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttctttg 87  Q
    |||||||| ||| ||||| |||||||||||||||| ||||||||||||||    
T  37436804 atgaatttattctcatctccatgggaactttattctcacccttttctttg 37436755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 46666596 - 46666641
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||    
T  46666596 atgaatttattcccatctccatgggaactttattcccacccttttc 46666641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 47037345 - 47037390
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||    
T  47037345 atgaatttattcccatctccatgggaactttattcccacccttttc 47037390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 128 - 188
Target Start/End: Complemental strand, 48916118 - 48916060
Alignment:
Q  128 aaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattc 188  Q
    |||||||||||| |||| |||||||||||||| ||  ||||| ||||||||||||||||||    
T  48916118 aaataaaatttagtaaacttgtaacaaacataggc--atatacatttctatcattttattc 48916060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 129 - 188
Target Start/End: Original strand, 37261824 - 37261881
Alignment:
Q  129 aataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattc 188  Q
    |||||||||||||||| |||||||||||||| ||  || ||||||||||| |||||||||    
T  37261824 aataaaatttaataaacttgtaacaaacatatgc--atgtatatttctataattttattc 37261881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 38 - 82
Target Start/End: Original strand, 39329496 - 39329540
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacaccctttt 82  Q
    |||||||| ||||||||| |||||||||||||||| |||||||||    
T  39329496 atgaatttattcccatctccatgggaactttattcccaccctttt 39329540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 107 - 224
Target Start/End: Complemental strand, 1227995 - 1227880
Alignment:
Q  107 caagaaacgttttatactctgaaa-taaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccctaaaatctgcgaata 205  Q
    |||||||| |||||||| |||||| |||||||||||||| ||||||||| |||| ||  |||| ||||| ||| ||||||||  | | ||||| ||||||    
T  1227995 caagaaacattttatac-ctgaaaataaaatttaataaacttgtaacaagcataggc--atatgtatttttatgattttattttcaagaatctacgaata 1227899  T
Q  206 tcacttgaaacaacacacc 224  Q
    | |||| ||| ||||||||    
T  1227898 taacttaaaaaaacacacc 1227880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 190
Target Start/End: Original strand, 2430460 - 2430532
Alignment:
Q  116 ttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccc 190  Q
    |||||||| | | ||||||||||| |||| |||||||||||||| ||  ||||| ||| ||||||||||||||||    
T  2430460 ttttatacccgggaataaaatttagtaaacttgtaacaaacataggc--atatacattcctatcattttattccc 2430532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 167
Target Start/End: Original strand, 2632816 - 2632867
Alignment:
Q  116 ttttatactctgaaataaaatttaataaatttgtaacaaacataagcatata 167  Q
    |||||||| | | |||||||||||||||| |||||||||||||| |||||||    
T  2632816 ttttatacccgggaataaaatttaataaacttgtaacaaacataggcatata 2632867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 129 - 187
Target Start/End: Complemental strand, 4683469 - 4683413
Alignment:
Q  129 aataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttatt 187  Q
    ||||||||||| ||||||||||||||||||| ||  ||||| ||| |||||||||||||    
T  4683469 aataaaatttagtaaatttgtaacaaacataggc--atatacattcctatcattttatt 4683413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 86
Target Start/End: Complemental strand, 11014632 - 11014577
Alignment:
Q  31 gttacacatgaatttgttcccatcttcatgggaactttattcacacccttttcttt 86  Q
    |||||| |||||||| ||| |||||||||| ||||||||||  |||||||||||||    
T  11014632 gttacatatgaatttattctcatcttcatgagaactttatttccacccttttcttt 11014577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 218
Target Start/End: Complemental strand, 12190285 - 12190185
Alignment:
Q  116 ttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccctaaaatctgcgaatatcacttgaaa 215  Q
    |||||||| | | ||||||||||| |||| |||||||||||||| ||  || || ||| |||||||||||||||| ||||||  | | ||| ||||||||    
T  12190285 ttttatacccgggaataaaatttagtaaacttgtaacaaacataggc--atgtacattcctatcattttattcccgaaaatcaacaattataacttgaaa 12190188  T
Q  216 caa 218  Q
    |||    
T  12190187 caa 12190185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 87
Target Start/End: Original strand, 47677525 - 47677580
Alignment:
Q  32 ttacacatgaatttgttcccatcttcatgggaactttattcacacccttttctttg 87  Q
    |||||||| | ||| |||||||||||||||||||||||||| || ||||| |||||    
T  47677525 ttacacataattttattcccatcttcatgggaactttattcccatcctttcctttg 47677580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 132 - 190
Target Start/End: Complemental strand, 49823009 - 49822953
Alignment:
Q  132 aaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccc 190  Q
    |||||||| |||| |||||||||||||| ||  ||||| ||||||||||||||||||||    
T  49823009 aaaatttagtaaacttgtaacaaacataggc--atatacatttctatcattttattccc 49822953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 1597437 - 1597378
Alignment:
Q  129 aataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccc 190  Q
    ||||||||||| |||| |||||||||||||| ||  ||||| ||| ||||||||||||||||    
T  1597437 aataaaatttagtaaacttgtaacaaacataggc--atatacattcctatcattttattccc 1597378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 6978747 - 6978806
Alignment:
Q  129 aataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccc 190  Q
    |||||| |||| |||| |||||||||||||| ||  ||||| ||||||||||||||||||||    
T  6978747 aataaattttagtaaacttgtaacaaacataggc--atatacatttctatcattttattccc 6978806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 38 - 88
Target Start/End: Original strand, 8331902 - 8331952
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttctttga 88  Q
    |||||||| ||| ||||| |||||||||||||||| |||||||||| ||||    
T  8331902 atgaatttattctcatctccatgggaactttattcccacccttttccttga 8331952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 9115814 - 9115873
Alignment:
Q  129 aataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccc 190  Q
    |||||| |||| |||| |||||||||||||| ||  ||||| ||||||||||||||||||||    
T  9115814 aataaattttagtaaacttgtaacaaacataggc--atatacatttctatcattttattccc 9115873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 33 - 87
Target Start/End: Original strand, 13653734 - 13653788
Alignment:
Q  33 tacacatgaatttgttcccatcttcatgggaactttattcacacccttttctttg 87  Q
    |||| |||||||| ||| ||||| |||||||||||||||| |||| |||||||||    
T  13653734 tacatatgaatttattctcatctccatgggaactttattcccaccattttctttg 13653788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 116 - 166
Target Start/End: Complemental strand, 13931992 - 13931942
Alignment:
Q  116 ttttatactctgaaataaaatttaataaatttgtaacaaacataagcatat 166  Q
    |||||||| | ||||||||||||| |||| |||||||||||||| ||||||    
T  13931992 ttttatacccggaaataaaatttagtaaacttgtaacaaacataggcatat 13931942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 32 - 86
Target Start/End: Complemental strand, 19923654 - 19923600
Alignment:
Q  32 ttacacatgaatttgttcccatcttcatgggaactttattcacacccttttcttt 86  Q
    ||||||||||||||||||| |||||||||  ||||||| || |||| ||||||||    
T  19923654 ttacacatgaatttgttccaatcttcatgaaaactttactctcaccattttcttt 19923600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 25789740 - 25789799
Alignment:
Q  129 aataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccc 190  Q
    |||||| |||| |||| |||||||||||||| ||  ||||| ||||||||||||||||||||    
T  25789740 aataaattttagtaaacttgtaacaaacataggc--atatacatttctatcattttattccc 25789799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 32 - 82
Target Start/End: Original strand, 29769393 - 29769443
Alignment:
Q  32 ttacacatgaatttgttcccatcttcatgggaactttattcacaccctttt 82  Q
    |||||||||||||| ||  ||||||||||| |||||||||| |||||||||    
T  29769393 ttacacatgaatttattttcatcttcatggaaactttattcccaccctttt 29769443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 117 - 167
Target Start/End: Original strand, 32824887 - 32824937
Alignment:
Q  117 tttatactctgaaataaaatttaataaatttgtaacaaacataagcatata 167  Q
    ||||||| | ||||||||||||| |||| |||||||||||||| |||||||    
T  32824887 tttatacccggaaataaaatttagtaaacttgtaacaaacataggcatata 32824937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 35187433 - 35187492
Alignment:
Q  129 aataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccc 190  Q
    |||||| |||| |||| |||||||||||||||  | ||||| ||||||||||||||||||||    
T  35187433 aataaattttagtaaacttgtaacaaacataa--acatatacatttctatcattttattccc 35187492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 36361759 - 36361818
Alignment:
Q  129 aataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccc 190  Q
    ||||||||||| |||| |||||||||||||| ||  ||||| ||| ||||||||||||||||    
T  36361759 aataaaatttagtaaacttgtaacaaacataggc--atatacattcctatcattttattccc 36361818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 129 - 218
Target Start/End: Complemental strand, 38519157 - 38519070
Alignment:
Q  129 aataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccctaaaatctgcgaatatcacttgaaacaa 218  Q
    ||||||||||| |||| |||||||||||||||||  || | |||||||||   |||||| || ||||||| | ||||| |||||||||||    
T  38519157 aataaaatttagtaaacttgtaacaaacataagc--atctgtatttctattgatttatttccaaaaatctacaaatataacttgaaacaa 38519070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 141 - 190
Target Start/End: Complemental strand, 38964762 - 38964715
Alignment:
Q  141 taaatttgtaacaaacataagcatatatatatttctatcattttattccc 190  Q
    |||| ||||||||||||||||||  |||| ||||||||||||||||||||    
T  38964762 taaacttgtaacaaacataagca--tatacatttctatcattttattccc 38964715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 39930434 - 39930493
Alignment:
Q  129 aataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccc 190  Q
    |||||| |||| |||| |||||||||||||| ||  ||||| ||||||||||||||||||||    
T  39930434 aataaattttagtaaacttgtaacaaacataggc--atatacatttctatcattttattccc 39930493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 33 - 87
Target Start/End: Complemental strand, 48916211 - 48916157
Alignment:
Q  33 tacacatgaatttgttcccatcttcatgggaactttattcacacccttttctttg 87  Q
    |||| |||||||| ||||||||| |||||||||||||||| || |||| ||||||    
T  48916211 tacatatgaatttattcccatctccatgggaactttattcccatccttatctttg 48916157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 189
Target Start/End: Complemental strand, 9831965 - 9831907
Alignment:
Q  129 aataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattcc 189  Q
    |||||| |||| |||| |||||||||||||| ||  ||||| |||||||||||||||||||    
T  9831965 aataaattttagtaaacttgtaacaaacataggc--atatacatttctatcattttattcc 9831907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 116 - 188
Target Start/End: Complemental strand, 20505097 - 20505027
Alignment:
Q  116 ttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattc 188  Q
    ||||||||||   ||||||||||| |||| ||||||||||||||   | || |||||||||||||||||||||    
T  20505097 ttttatactcgtgaataaaatttagtaaacttgtaacaaacata--gacatgtatatttctatcattttattc 20505027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 24116546 - 24116470
Alignment:
Q  13 aatatgaattataataggg--ttacacatgaatttgttcccatcttcatgggaactttattcacacccttttctttg 87  Q
    |||| |||||||||||||   |||||||| ||| | ||| ||||||||||||| |||||||| | ||||||||||||    
T  24116546 aataggaattataataggtaattacacataaatatattctcatcttcatgggagctttattccctcccttttctttg 24116470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 188
Target Start/End: Complemental strand, 37436717 - 37436659
Alignment:
Q  128 aaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattc 188  Q
    |||||||||||| |||| |||||||||||||| ||  ||||| ||| ||||||||||||||    
T  37436717 aaataaaatttagtaaacttgtaacaaacatatgc--atatacattcctatcattttattc 37436659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 51445263 - 51445218
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||| ||||| |||||||||||||||| ||||||||||    
T  51445263 atgaatttattctcatctccatgggaactttattcccacccttttc 51445218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 129 - 188
Target Start/End: Original strand, 3939517 - 3939574
Alignment:
Q  129 aataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattc 188  Q
    |||||||||||  ||| |||||||||||||||||  || ||||||||||||||| |||||    
T  3939517 aataaaatttagcaaacttgtaacaaacataagc--atgtatatttctatcattctattc 3939574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 129 - 188
Target Start/End: Original strand, 13653828 - 13653885
Alignment:
Q  129 aataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattc 188  Q
    ||||||||||| |||| ||||||||||| ||  |||||  ||||||||||||||||||||    
T  13653828 aataaaatttagtaaacttgtaacaaacgtatacatat--atatttctatcattttattc 13653885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 116 - 187
Target Start/End: Complemental strand, 17475429 - 17475360
Alignment:
Q  116 ttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttatt 187  Q
    |||||||| | | ||||||||||| |||| || ||||||||||||  | ||||||||||||||| |||||||    
T  17475429 ttttatacccgggaataaaatttagtaaacttataacaaacataa--acatatatatttctatcgttttatt 17475360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 112 - 168
Target Start/End: Complemental strand, 24116447 - 24116391
Alignment:
Q  112 aacgttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatat 168  Q
    |||||||||||| | | ||||||||||| |||| |||| |||||||||| |||||||    
T  24116447 aacgttttatacccgggaataaaatttagtaaacttgtgacaaacataaacatatat 24116391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 112 - 160
Target Start/End: Original strand, 45772041 - 45772089
Alignment:
Q  112 aacgttttatactctgaaataaaatttaataaatttgtaacaaacataa 160  Q
    |||||||||||  | |||||||||||||||||| || ||||||||||||    
T  45772041 aacgttttatatccagaaataaaatttaataaacttataacaaacataa 45772089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 51 - 83
Target Start/End: Original strand, 46960528 - 46960560
Alignment:
Q  51 catcttcatgggaactttattcacacccttttc 83  Q
    |||||||||||||||||||||| ||||||||||    
T  46960528 catcttcatgggaactttattcccacccttttc 46960560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 7e-16; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 111 - 218
Target Start/End: Original strand, 18824103 - 18824209
Alignment:
Q  111 aaacgttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccctaaaatctgcgaatatcact 210  Q
    |||| |||||||| | | ||||||||||| | || |||||||||||||| |||||||||| ||||||||||||||||||| ||||||  | ||||  |||    
T  18824103 aaacattttatacccgggaataaaatttagtgaacttgtaacaaacataggcatatatat-tttctatcattttattcccaaaaatcaacaaatacaact 18824201  T
Q  211 tgaaacaa 218  Q
    ||||||||    
T  18824202 tgaaacaa 18824209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 5543343 - 5543282
Alignment:
Q  13 aatatgaattataataggg--ttacacatgaatttgttcccatcttcatgggaactttattc 72  Q
    |||||| |||||||||||   |||||||||||||||||||||||||||||||||||||||||    
T  5543343 aatatggattataataggtaattacacatgaatttgttcccatcttcatgggaactttattc 5543282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 116 - 190
Target Start/End: Original strand, 45045589 - 45045661
Alignment:
Q  116 ttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccc 190  Q
    |||||||| | |||||||||||||||||| |||||||||||||| ||  ||||| ||| ||||||||||||||||    
T  45045589 ttttatacccggaaataaaatttaataaacttgtaacaaacataggc--atatacattcctatcattttattccc 45045661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 32 - 86
Target Start/End: Complemental strand, 47246255 - 47246201
Alignment:
Q  32 ttacacatgaatttgttcccatcttcatgggaactttattcacacccttttcttt 86  Q
    |||||||||||||| ||| ||| |||||||||||||||||| |||||||||||||    
T  47246255 ttacacatgaatttattctcatattcatgggaactttattctcacccttttcttt 47246201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 43949132 - 43949177
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| |||||||||||||||||||||||||| ||||||||||    
T  43949132 atgaatttattcccatcttcatgggaactttattcccacccttttc 43949177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 116 - 187
Target Start/End: Original strand, 11000665 - 11000735
Alignment:
Q  116 ttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttatt 187  Q
    |||||||| | | ||||||||||| |||| |||||||||||||| || ||||||||||| ||||||||||||    
T  11000665 ttttatacccgggaataaaatttagtaaacttgtaacaaacataggc-tatatatatttatatcattttatt 11000735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 116 - 170
Target Start/End: Complemental strand, 25045725 - 25045671
Alignment:
Q  116 ttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatat 170  Q
    |||||||||| | ||||||||||| |||| |||||||||||||| ||||||||||    
T  25045725 ttttatactcgggaataaaatttagtaaacttgtaacaaacatatgcatatatat 25045671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 116 - 197
Target Start/End: Original strand, 25098032 - 25098111
Alignment:
Q  116 ttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccctaaaatc 197  Q
    |||||||| | ||||||||||||| |||| |||||||||||||  ||  ||||| ||| |||||||||||||||| ||||||    
T  25098032 ttttatacccggaaataaaatttagtaaacttgtaacaaacatgggc--atatacattcctatcattttattcccgaaaatc 25098111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 188
Target Start/End: Complemental strand, 41684119 - 41684060
Alignment:
Q  127 gaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattc 188  Q
    ||||||||||||| |||| |||||||||||||||  | ||||||||||||||||| ||||||    
T  41684119 gaaataaaatttagtaaacttgtaacaaacataa--acatatatatttctatcatattattc 41684060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 116 - 218
Target Start/End: Original strand, 45440870 - 45440971
Alignment:
Q  116 ttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccctaaaatctgcgaatatcacttgaaa 215  Q
    |||||||||| | ||||||||||| |||| |||||||||||||| |||| ||| | ||| ||| ||||||||||| | ||||| | | ||| ||||||||    
T  45440870 ttttatactcgggaataaaatttagtaaacttgtaacaaacatatgcatgtatgt-tttttatgattttattcccaagaatctacaattataacttgaaa 45440968  T
Q  216 caa 218  Q
    |||    
T  45440969 caa 45440971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 48341338 - 48341397
Alignment:
Q  129 aataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccc 190  Q
    |||||||||||||||| |||||||||||||| ||  ||||| ||| ||||||||||||||||    
T  48341338 aataaaatttaataaacttgtaacaaacataggc--atatacattcctatcattttattccc 48341397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 8419773 - 8419728
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||    
T  8419773 atgaatttattcccatctccatgggaactttattcccacccttttc 8419728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 11329880 - 11329925
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||    
T  11329880 atgaatttattcccatctccatgggaactttattcccacccttttc 11329925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 16825538 - 16825493
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||    
T  16825538 atgaatttattcccatctccatgggaactttattcccacccttttc 16825493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 25045801 - 25045756
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||    
T  25045801 atgaatttattcccatctccatgggaactttattcccacccttttc 25045756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 25097956 - 25098001
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||    
T  25097956 atgaatttattcccatctccatgggaactttattcccacccttttc 25098001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 27248180 - 27248225
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||    
T  27248180 atgaatttattcccatctccatgggaactttattcccacccttttc 27248225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 27419408 - 27419363
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||    
T  27419408 atgaatttattcccatctccatgggaactttattcccacccttttc 27419363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 128 - 188
Target Start/End: Original strand, 30871163 - 30871221
Alignment:
Q  128 aaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattc 188  Q
    |||||||| |||||||| |||||||||||||||  | || |||||||||||||||||||||    
T  30871163 aaataaaacttaataaacttgtaacaaacataa--aaatgtatatttctatcattttattc 30871221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 39554070 - 39554115
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||    
T  39554070 atgaatttattcccatctccatgggaactttattcccacccttttc 39554115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 44820141 - 44820186
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||    
T  44820141 atgaatttattcccatctccatgggaactttattcccacccttttc 44820186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 45045513 - 45045558
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||    
T  45045513 atgaatttattcccatctccatgggaactttattcccacccttttc 45045558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 38 - 82
Target Start/End: Complemental strand, 28904370 - 28904326
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacaccctttt 82  Q
    |||||||| ||||||||| |||||||||||||||| |||||||||    
T  28904370 atgaatttattcccatctccatgggaactttattcccaccctttt 28904326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 38 - 82
Target Start/End: Complemental strand, 34930651 - 34930607
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacaccctttt 82  Q
    |||||||| ||||||||| |||||||||||||||| |||||||||    
T  34930651 atgaatttattcccatctccatgggaactttattcccaccctttt 34930607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 38528895 - 38528839
Alignment:
Q  32 ttacacatgaatttgttcccatcttcatgggaactttattcacacccttttctttga 88  Q
    |||||||| ||||| ||| |||||||||| ||||||||||| |||| ||||||||||    
T  38528895 ttacacataaatttattctcatcttcatgagaactttattctcacctttttctttga 38528839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 9947098 - 9947026
Alignment:
Q  116 ttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccc 190  Q
    |||||||| | | ||||||||||| |||| |||||||||||||| ||  ||||| ||| ||||||||||||||||    
T  9947098 ttttatacccgggaataaaatttagtaaacttgtaacaaacataggc--atatacattcctatcattttattccc 9947026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 31921929 - 31921862
Alignment:
Q  20 attataatagggttacacatgaatttgttcccatcttcatgggaactttattcacacccttttctttg 87  Q
    |||||||||||  || | |||||||| ||| |||||  ||||||||||||||| ||||||||||||||    
T  31921929 attataataggactatatatgaatttattctcatctctatgggaactttattcccacccttttctttg 31921862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 190
Target Start/End: Original strand, 33378805 - 33378877
Alignment:
Q  116 ttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccc 190  Q
    |||||||| | | ||||||||||| |||| |||||||||||||| ||  ||||| ||| ||||||||||||||||    
T  33378805 ttttatacccaggaataaaatttagtaaacttgtaacaaacataggc--atatacattcctatcattttattccc 33378877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 190
Target Start/End: Original strand, 40212852 - 40212924
Alignment:
Q  116 ttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccc 190  Q
    |||||||| | | ||||||||||| |||| |||||||||||||| ||  ||||| ||| ||||||||||||||||    
T  40212852 ttttataccccggaataaaatttagtaaacttgtaacaaacataggc--atatacattcctatcattttattccc 40212924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 77
Target Start/End: Complemental strand, 40385839 - 40385773
Alignment:
Q  13 aatatgaattataatagg--gttacacatgaatttgttcccatcttcatgggaactttattcacacc 77  Q
    |||||| |||||||||||  ||||||||||| ||| || ||||||| ||||||||||||||| ||||    
T  40385839 aatatggattataataggtagttacacatgagtttatttccatcttaatgggaactttattcccacc 40385773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 190
Target Start/End: Original strand, 43949204 - 43949280
Alignment:
Q  112 aacgttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccc 190  Q
    ||| |||||||||  | |||||| |||| |||| |||||||||||||| ||  ||||| ||||||||||||||||||||    
T  43949204 aacattttatactaaggaataaattttagtaaacttgtaacaaacataggc--atatacatttctatcattttattccc 43949280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 109 - 187
Target Start/End: Original strand, 44566001 - 44566077
Alignment:
Q  109 agaaacgttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttatt 187  Q
    |||||| |||||||| | | |||||||||||||||| ||||||||||||||   | ||||| ||| |||||||||||||    
T  44566001 agaaacattttatacccgggaataaaatttaataaacttgtaacaaacata--gacatatacattcctatcattttatt 44566077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 129 - 214
Target Start/End: Complemental strand, 5543226 - 5543143
Alignment:
Q  129 aataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccctaaaatctgcgaatatcacttgaa 214  Q
    ||||||||||| |||| |||||||||||||||  | || ||||||| |||| |||||||||| | ||||| |||| || |||||||    
T  5543226 aataaaatttagtaaacttgtaacaaacataa--acatgtatatttatatcgttttattcccaagaatctacgaaaataacttgaa 5543143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 11329969 - 11330028
Alignment:
Q  129 aataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccc 190  Q
    |||||| |||| |||| |||||||||||||| ||  ||||| ||||||||||||||||||||    
T  11329969 aataaattttagtaaacttgtaacaaacataggc--atatacatttctatcattttattccc 11330028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 25924732 - 25924673
Alignment:
Q  129 aataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccc 190  Q
    |||||| |||| |||| |||||||||||||| ||  ||||| ||||||||||||||||||||    
T  25924732 aataaattttagtaaacttgtaacaaacataggc--atatacatttctatcattttattccc 25924673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 27213950 - 27213891
Alignment:
Q  129 aataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccc 190  Q
    |||||| |||| |||| |||||||||||||| ||  ||||| ||||||||||||||||||||    
T  27213950 aataaattttagtaaacttgtaacaaacataggc--atatacatttctatcattttattccc 27213891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 27419319 - 27419260
Alignment:
Q  129 aataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccc 190  Q
    |||||| |||| |||| |||||||||||||| ||  ||||| ||||||||||||||||||||    
T  27419319 aataaattttagtaaacttgtaacaaacataggc--atatacatttctatcattttattccc 27419260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 39554159 - 39554218
Alignment:
Q  129 aataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccc 190  Q
    |||||| |||| |||| |||||||||||||| ||  ||||| ||||||||||||||||||||    
T  39554159 aataaattttagtaaacttgtaacaaacataggc--atatacatttctatcattttattccc 39554218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 116 - 170
Target Start/End: Original strand, 45723112 - 45723166
Alignment:
Q  116 ttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatat 170  Q
    |||||||||| | ||||||||||| |||| |||| ||||||||| ||||||||||    
T  45723112 ttttatactcgggaataaaatttagtaaacttgtgacaaacataggcatatatat 45723166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 170
Target Start/End: Complemental strand, 6656586 - 6656526
Alignment:
Q  109 agaaacgttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatat 170  Q
    |||||| ||||||||||  ||||||| |||| |||| |||||||||||||| ||||||||||    
T  6656586 agaaacattttatactcgaaaataaa-tttagtaaacttgtaacaaacataggcatatatat 6656526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 87
Target Start/End: Original strand, 11000589 - 11000638
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttctttg 87  Q
    |||||||| ||| ||| | |||||||||||||||| ||||||||||||||    
T  11000589 atgaatttattctcatatgcatgggaactttattcccacccttttctttg 11000638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 189
Target Start/End: Complemental strand, 16825449 - 16825391
Alignment:
Q  129 aataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattcc 189  Q
    |||||| |||| |||| |||||||||||||| ||  ||||| |||||||||||||||||||    
T  16825449 aataaattttagtaaacttgtaacaaacataggc--atatacatttctatcattttattcc 16825391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 33378721 - 33378766
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||||||||| |||||||||||||||| |||| |||||    
T  33378721 atgaatttattcccatctccatgggaactttattcccaccattttc 33378766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 35488373 - 35488328
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||||||||| ||| |||||||||||| ||||||||||    
T  35488373 atgaatttattcccatctccataggaactttattcccacccttttc 35488328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 37534287 - 37534242
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||| ||||| |||||||||||||||| ||||||||||    
T  37534287 atgaatttattcacatctccatgggaactttattcccacccttttc 37534242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 170
Target Start/End: Complemental strand, 38528802 - 38528761
Alignment:
Q  129 aataaaatttaataaatttgtaacaaacataagcatatatat 170  Q
    |||||||| || |||| |||||||||||||||||||||||||    
T  38528802 aataaaatctagtaaacttgtaacaaacataagcatatatat 38528761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 44565932 - 44565977
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||| ||||| |||||||||||||||| ||||||||||    
T  44565932 atgaatttattctcatctccatgggaactttattcccacccttttc 44565977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 45265232 - 45265187
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||| ||||| |||||||||||||||| ||||||||||    
T  45265232 atgaatttattctcatctccatgggaactttattcccacccttttc 45265187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 48160757 - 48160712
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||||||||| |||||||||||||||| |||| |||||    
T  48160757 atgaatttattcccatctccatgggaactttattcccaccattttc 48160712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 48341250 - 48341295
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||||||||| |||||||||||||||| |||| |||||    
T  48341250 atgaatttattcccatctccatgggaactttattcccaccattttc 48341295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 38 - 82
Target Start/End: Complemental strand, 9814398 - 9814354
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacaccctttt 82  Q
    |||||||| ||||||||| |||| ||||||||||| |||||||||    
T  9814398 atgaatttattcccatctccatgagaactttattcccaccctttt 9814354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 128 - 187
Target Start/End: Complemental strand, 10902746 - 10902689
Alignment:
Q  128 aaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttatt 187  Q
    |||||||||||| |||| ||||||||||||||   | || ||||||||||||||||||||    
T  10902746 aaataaaatttagtaaacttgtaacaaacata--gacatgtatatttctatcattttatt 10902689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 72
Target Start/End: Complemental strand, 10902862 - 10902822
Alignment:
Q  32 ttacacatgaatttgttcccatcttcatgggaactttattc 72  Q
    |||||||||||||| ||| |||||||||| |||||||||||    
T  10902862 ttacacatgaatttattctcatcttcatgtgaactttattc 10902822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 112 - 164
Target Start/End: Original strand, 31598636 - 31598688
Alignment:
Q  112 aacgttttatactctgaaataaaatttaataaatttgtaacaaacataagcat 164  Q
    ||||||||||||  || ||||||||||| |||| |||||||||| ||||||||    
T  31598636 aacgttttataccttgtaataaaatttagtaaacttgtaacaaatataagcat 31598688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 38 - 82
Target Start/End: Original strand, 40212776 - 40212820
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacaccctttt 82  Q
    |||||||| ||||||||| |||| ||||||||||| |||||||||    
T  40212776 atgaatttattcccatctccatgagaactttattcccaccctttt 40212820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 38 - 82
Target Start/End: Complemental strand, 41632548 - 41632504
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacaccctttt 82  Q
    |||||||| ||| ||||| |||||||||||||||| |||||||||    
T  41632548 atgaatttattctcatctccatgggaactttattcccaccctttt 41632504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 116 - 226
Target Start/End: Complemental strand, 45265156 - 45265047
Alignment:
Q  116 ttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccctaaaatctgcgaatatcacttgaaa 215  Q
    |||||||| | ||||||||||||| |||| || ||||||||||| ||  ||||| ||| | |||||||||||||| | ||||  | | ||| ||||||||    
T  45265156 ttttatacccggaaataaaatttagtaaacttataacaaacataggc--atatacattccaatcattttattcccgagaatcaacaattataacttgaaa 45265059  T
Q  216 c-aacacacctt 226  Q
    | ||||||||||    
T  45265058 caaacacacctt 45265047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 7e-16; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 33218021 - 33217949
Alignment:
Q  116 ttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccc 190  Q
    |||||||||| | ||||||||||||||||||||||||||||||| ||  ||||| ||| ||||||||||||||||    
T  33218021 ttttatactcgggaataaaatttaataaatttgtaacaaacataggc--atatacattcctatcattttattccc 33217949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 109 - 218
Target Start/End: Complemental strand, 33647818 - 33647711
Alignment:
Q  109 agaaacgttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccctaaaatctgcgaatatca 208  Q
    ||||||||||||||| | | ||||||||||| |||| ||||||||||||||   | || |||||||||| | |||||||||| | ||||| ||||||| |    
T  33647818 agaaacgttttatacccaggaataaaatttagtaaacttgtaacaaacata--gagatgtatatttctaacgttttattcccgagaatctacgaatatta 33647721  T
Q  209 cttgaaacaa 218  Q
    ||||||||||    
T  33647720 cttgaaacaa 33647711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 39932620 - 39932559
Alignment:
Q  129 aataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccc 190  Q
    ||||||||||| |||| || |||||||||||| |||||||| ||||||||||||||||||||    
T  39932620 aataaaatttagtaaacttataacaaacataaacatatatacatttctatcattttattccc 39932559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 32 - 87
Target Start/End: Original strand, 27823155 - 27823210
Alignment:
Q  32 ttacacatgaatttgttcccatcttcatgggaactttattcacacccttttctttg 87  Q
    |||||||||||||||||| |||||||||| ||| ||||||| ||||||||||||||    
T  27823155 ttacacatgaatttgttctcatcttcatgagaattttattcccacccttttctttg 27823210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 129 - 187
Target Start/End: Original strand, 33497833 - 33497889
Alignment:
Q  129 aataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttatt 187  Q
    ||||||||||||||||||||||||||| ||||||  || ||||||||||||||||||||    
T  33497833 aataaaatttaataaatttgtaacaaatataagc--atgtatatttctatcattttatt 33497889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 1246997 - 1246938
Alignment:
Q  129 aataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccc 190  Q
    ||||||||||| |||| |||||||||||||||||  |||| |||||||||||||||||||||    
T  1246997 aataaaatttagtaaacttgtaacaaacataagc--atatgtatttctatcattttattccc 1246938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 28124620 - 28124575
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| |||||||||||||||||||||||||| ||||||||||    
T  28124620 atgaatttattcccatcttcatgggaactttattcccacccttttc 28124575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 40908152 - 40908197
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| |||||||||||||||||||||||||| ||||||||||    
T  40908152 atgaatttattcccatcttcatgggaactttattcccacccttttc 40908197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 24784090 - 24784146
Alignment:
Q  32 ttacacatgaatttgttcccatcttcatgggaactttattcacacccttttctttga 88  Q
    |||||||| | ||| ||||||||||||||||||||||||||| || |||||||||||    
T  24784090 ttacacataattttattcccatcttcatgggaactttattcatacacttttctttga 24784146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 9320556 - 9320484
Alignment:
Q  116 ttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccc 190  Q
    |||||||| | | ||||||||||| |||| ||||||||||||||||  |||||| ||| ||||||||||||||||    
T  9320556 ttttatacccgggaataaaatttagtaaacttgtaacaaacataag--tatatacattcctatcattttattccc 9320484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 112 - 218
Target Start/End: Original strand, 27823233 - 27823337
Alignment:
Q  112 aacgttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccctaaaatctgcgaatatcactt 211  Q
    |||||||||||||| | ||||||||||| |||| || || ||||||||  ||| ||||  |||||||||||||||||||  |||| |  |||||| ||||    
T  27823233 aacgttttatactcgggaataaaatttagtaaacttatagcaaacatagacatttata--tttctatcattttattcccataaatttatgaatataactt 27823330  T
Q  212 gaaacaa 218  Q
    |||||||    
T  27823331 gaaacaa 27823337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 112 - 218
Target Start/End: Complemental strand, 28139832 - 28139728
Alignment:
Q  112 aacgttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccctaaaatctgcgaatatcactt 211  Q
    |||||||||||  |  |||||||||||| |||  |||||||||||||||||  || |||||||||||| |||||||||  | ||| | ||||||| ||||    
T  28139832 aacgttttatatccgaaaataaaatttactaatcttgtaacaaacataagc--atgtatatttctatctttttattcctaagaatatacgaatataactt 28139735  T
Q  212 gaaacaa 218  Q
    |||||||    
T  28139734 gaaacaa 28139728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 128 - 218
Target Start/End: Complemental strand, 43132253 - 43132165
Alignment:
Q  128 aaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccctaaaatctgcgaatatcacttgaaacaa 218  Q
    ||||||||||||||||| |||||||||||||| ||  ||||||||| |||| ||||||||| | | ||||  | ||||| |||||||||||    
T  43132253 aaataaaatttaataaacttgtaacaaacataggc--atatatattcctattattttattctcgagaatcaacaaatataacttgaaacaa 43132165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 129 - 187
Target Start/End: Complemental strand, 53165820 - 53165764
Alignment:
Q  129 aataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttatt 187  Q
    ||||||||||| |||| |||||||||||||||||||||  ||||| |||||||||||||    
T  53165820 aataaaatttagtaaacttgtaacaaacataagcatat--atattcctatcattttatt 53165764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 129 - 183
Target Start/End: Original strand, 18460915 - 18460969
Alignment:
Q  129 aataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattt 183  Q
    ||||||||||| |||| ||||||||||||||  ||||||||||||||||| ||||    
T  18460915 aataaaatttagtaaacttgtaacaaacatagacatatatatatttctattattt 18460969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 1099085 - 1099130
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||    
T  1099085 atgaatttattcccatctccatgggaactttattcccacccttttc 1099130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 8476492 - 8476447
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||    
T  8476492 atgaatttattcccatctccatgggaactttattcccacccttttc 8476447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 11239304 - 11239259
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||    
T  11239304 atgaatttattcccatctccatgggaactttattcccacccttttc 11239259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 20297680 - 20297725
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||    
T  20297680 atgaatttattcccatctccatgggaactttattcccacccttttc 20297725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 20414649 - 20414604
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||    
T  20414649 atgaatttattcccatctccatgggaactttattcccacccttttc 20414604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 116 - 188
Target Start/End: Complemental strand, 31436031 - 31435961
Alignment:
Q  116 ttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattc 188  Q
    |||||||| | | ||||||||||| |||| |||||||||||||| ||  ||||| ||||||||||||||||||    
T  31436031 ttttatacccaggaataaaatttagtaaacttgtaacaaacataggc--atatacatttctatcattttattc 31435961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 46359839 - 46359884
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||    
T  46359839 atgaatttattcccatctccatgggaactttattcccacccttttc 46359884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 47115041 - 47114996
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||    
T  47115041 atgaatttattcccatctccatgggaactttattcccacccttttc 47114996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 48339941 - 48339896
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||    
T  48339941 atgaatttattcccatctccatgggaactttattcccacccttttc 48339896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 129 - 188
Target Start/End: Complemental strand, 12228351 - 12228294
Alignment:
Q  129 aataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattc 188  Q
    ||||||||||| |||| |||||| ||||||| ||  ||||||||||||||||||||||||    
T  12228351 aataaaatttagtaaacttgtaataaacataggc--atatatatttctatcattttattc 12228294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 107 - 189
Target Start/End: Complemental strand, 2565576 - 2565497
Alignment:
Q  107 caagaaacgttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattcc 189  Q
    |||||||| |||||||| | |||||||| ||||| ||| |||||||||||| | |  ||||||||||||||| ||||||||||    
T  2565576 caagaaacattttatacccggaaataaa-tttaacaaacttgtaacaaacacagg--tatatatatttctattattttattcc 2565497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 129 - 187
Target Start/End: Original strand, 20297769 - 20297825
Alignment:
Q  129 aataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttatt 187  Q
    |||||| ||||||||| |||||||||||||| ||  ||||| |||||||||||||||||    
T  20297769 aataaattttaataaacttgtaacaaacataggc--atatacatttctatcattttatt 20297825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 190
Target Start/End: Original strand, 24574538 - 24574610
Alignment:
Q  116 ttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccc 190  Q
    |||||||| | | ||||||||||| |||| |||||||||||||| ||  ||||| ||| ||||||||||||||||    
T  24574538 ttttatacccaggaataaaatttagtaaacttgtaacaaacataggc--atatacattcctatcattttattccc 24574610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 190
Target Start/End: Original strand, 26848985 - 26849057
Alignment:
Q  116 ttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccc 190  Q
    |||||||| | | ||||||||||| |||| |||||||||||||| ||  ||||| ||| ||||||||||||||||    
T  26848985 ttttatacccgggaataaaatttagtaaacttgtaacaaacataggc--atatacattcctatcattttattccc 26849057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 87
Target Start/End: Complemental strand, 38140559 - 38140505
Alignment:
Q  32 ttacacatgaatttgttcccatcttcatgggaactttattcacacccttttctttg 87  Q
    ||||||||||| || ||| ||||||||||| |||||||||| ||||||||||||||    
T  38140559 ttacacatgaacttattctcatcttcatgg-aactttattctcacccttttctttg 38140505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 87
Target Start/End: Original strand, 40584491 - 40584546
Alignment:
Q  32 ttacacatgaatttgttcccatcttcatgggaactttattcacacccttttctttg 87  Q
    |||||||| | ||| ||||||||| |||||||||||||||| |||| |||||||||    
T  40584491 ttacacataattttattcccatctccatgggaactttattcccaccattttctttg 40584546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 190
Target Start/End: Original strand, 40908228 - 40908300
Alignment:
Q  116 ttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccc 190  Q
    |||||||| | | ||||||||||| |||| |||||||||||||| ||  ||||| ||| ||||||||||||||||    
T  40908228 ttttatacccgggaataaaatttagtaaacttgtaacaaacataggc--atatacattcctatcattttattccc 40908300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 167
Target Start/End: Complemental strand, 47114965 - 47114914
Alignment:
Q  116 ttttatactctgaaataaaatttaataaatttgtaacaaacataagcatata 167  Q
    |||||||||| | ||||||||||| |||| |||||||||||||| |||||||    
T  47114965 ttttatactcgggaataaaatttagtaaacttgtaacaaacataggcatata 47114914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 107 - 188
Target Start/End: Complemental strand, 6231618 - 6231539
Alignment:
Q  107 caagaaacgttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattc 188  Q
    |||| ||| |||||||| | | ||||||||||| |||| |||||||||||||| ||  ||||| ||| ||||||||||||||    
T  6231618 caaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacataggc--atatacattcctatcattttattc 6231539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 11239215 - 11239156
Alignment:
Q  129 aataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccc 190  Q
    |||||| |||| |||| |||||||||||||| ||  ||||| ||||||||||||||||||||    
T  11239215 aataaattttagtaaacttgtaacaaacataggc--atatacatttctatcattttattccc 11239156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 130 - 187
Target Start/End: Complemental strand, 15880934 - 15880879
Alignment:
Q  130 ataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttatt 187  Q
    ||||||||||||||||||||||||||||| |  | || ||||||| ||||||||||||    
T  15880934 ataaaatttaataaatttgtaacaaacatta--aaatgtatatttttatcattttatt 15880879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 44952284 - 44952343
Alignment:
Q  129 aataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccc 190  Q
    |||||| |||| |||| |||||||||||||| ||  ||||| ||||||||||||||||||||    
T  44952284 aataaattttagtaaacttgtaacaaacataggc--atatacatttctatcattttattccc 44952343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 116 - 189
Target Start/End: Original strand, 46359915 - 46359986
Alignment:
Q  116 ttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattcc 189  Q
    |||||||| | | ||||||||||| |||| |||||||||||||| |  |||||| ||| |||||||||||||||    
T  46359915 ttttatacccgggaataaaatttagtaaacttgtaacaaacatagg--tatatacattcctatcattttattcc 46359986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 87
Target Start/End: Complemental strand, 2565643 - 2565594
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttctttg 87  Q
    ||||||||  || |||||||||||||||||||||| |||| |||||||||    
T  2565643 atgaatttactctcatcttcatgggaactttattcccaccattttctttg 2565594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 6231685 - 6231640
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||||||||| |||||||||||||||| |||| |||||    
T  6231685 atgaatttattcccatctccatgggaactttattcccaccattttc 6231640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 26848909 - 26848954
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||||||| | |||||||||||||||| ||||||||||    
T  26848909 atgaatttattcccatttccatgggaactttattcccacccttttc 26848954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 87
Target Start/End: Complemental strand, 33218097 - 33218048
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttctttg 87  Q
    |||||||| |||||||||  ||||||||||||||| |||||||||| |||    
T  33218097 atgaatttattcccatctctatgggaactttattcccacccttttccttg 33218048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 44952195 - 44952240
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||| ||||| |||||||||||||||| ||||||||||    
T  44952195 atgaatttattctcatctccatgggaactttattcccacccttttc 44952240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 12931130 - 12931074
Alignment:
Q  32 ttacacatgaatttgttcccatcttcatgggaactttattcacacccttttctttga 88  Q
    |||||||| | ||| |||||||||  ||||||||||||||| |||| ||||||||||    
T  12931130 ttacacataattttattcccatctctatgggaactttattcccaccattttctttga 12931074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 128 - 187
Target Start/End: Complemental strand, 21925564 - 21925502
Alignment:
Q  128 aaataaaatttaataaatttgtaacaaacataagcatatatat---atttctatcattttatt 187  Q
    |||| ||||| |||||| |||||||||||||||||| ||||||    ||||||||||||||||    
T  21925564 aaatcaaattcaataaacttgtaacaaacataagcaaatatatttcttttctatcattttatt 21925502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 87
Target Start/End: Complemental strand, 28770385 - 28770345
Alignment:
Q  47 ttcccatcttcatgggaactttattcacacccttttctttg 87  Q
    |||||||||||||| ||||||||||| |||| |||||||||    
T  28770385 ttcccatcttcatgagaactttattcccaccattttctttg 28770345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 38 - 82
Target Start/End: Complemental strand, 31611169 - 31611125
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacaccctttt 82  Q
    |||||||| ||||||||| ||| |||||||||||| |||||||||    
T  31611169 atgaatttattcccatctccataggaactttattcccaccctttt 31611125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 38 - 82
Target Start/End: Complemental strand, 53165909 - 53165865
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacaccctttt 82  Q
    |||||||| ||| ||||| |||||||||||||||| |||||||||    
T  53165909 atgaatttattctcatctccatgggaactttattcccaccctttt 53165865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 111 - 215
Target Start/End: Complemental strand, 3913312 - 3913211
Alignment:
Q  111 aaacgttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccctaaaatctgcgaatatcact 210  Q
    |||| |||||||| ||| ||||||||||| ||||||||||| |||||||  || || |||||||||||| |||||||||| | ||||| ||||||| |||    
T  3913312 aaacattttatac-ctggaataaaatttagtaaatttgtaataaacata--cacatgtatatttctatcgttttattcccaagaatctacgaatataact 3913216  T
Q  211 tgaaa 215  Q
    |||||    
T  3913215 tgaaa 3913211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 35348735 - 35348659
Alignment:
Q  13 aatatgaattataataggg--ttacacatgaatttgttcccatcttcatgggaactttattcacacccttttctttg 87  Q
    ||||||||||||||||||   |||||  ||||||| ||| |||||||||||||||||||||| ||||||||||||||    
T  35348735 aatatgaattataataggtaattacatgtgaatttattctcatcttcatgggaactttattcccacccttttctttg 35348659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 128 - 188
Target Start/End: Original strand, 6930615 - 6930677
Alignment:
Q  128 aaataaaatttaataaatttgtaacaaacataagc--atatatatatttctatcattttattc 188  Q
    |||||||||||| |||| ||||||||||||||| |  ||||||||||||||||||||||||||    
T  6930615 aaataaaatttagtaaacttgtaacaaacataaacatatatatatatttctatcattttattc 6930677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 112 - 206
Target Start/End: Complemental strand, 31583174 - 31583083
Alignment:
Q  112 aacgttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccctaaaatctgcgaatat 206  Q
    |||||||||||||| | ||||||||||| |||| ||||||||||||||  ||   ||||||||||||| ||||||| ||  |||||| |||||||    
T  31583174 aacgttttatactcgggaataaaatttagtaaacttgtaacaaacatagaca---atatatttctatcgttttatttccagaaatctacgaatat 31583083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 4765668 - 4765596
Alignment:
Q  116 ttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccc 190  Q
    |||||||| | | |||||||||||||||| |||||||||||||| ||  ||||| ||| ||||||||||||||||    
T  4765668 ttttatacccgggaataaaatttaataaacttgtaacaaacataggc--atatacattcctatcattttattccc 4765596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 19065613 - 19065541
Alignment:
Q  116 ttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccc 190  Q
    |||||||| | ||||||||||||| |||| |||||||||||||| ||  ||||| ||| ||||||||||||||||    
T  19065613 ttttatacccggaaataaaatttagtaaacttgtaacaaacataggc--atatacattcctatcattttattccc 19065541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 109 - 218
Target Start/End: Original strand, 20962546 - 20962653
Alignment:
Q  109 agaaacgttttatactctga-aataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccctaaaatctgcgaatatc 207  Q
    |||||||||||||| || || ||||||||||| |||| |||||||||||||| |||  | |||  | |||||||||||||||| | ||||| |||||||     
T  20962546 agaaacgttttata-tccgagaataaaatttagtaaacttgtaacaaacataggcacgtgtat--tcctatcattttattcccaagaatctacgaatata 20962642  T
Q  208 acttgaaacaa 218  Q
    |||||||||||    
T  20962643 acttgaaacaa 20962653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 42012287 - 42012215
Alignment:
Q  116 ttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccc 190  Q
    ||||||||||   ||||||||||| |||||||||||||||||||   | |||| |||||||||||||||||||||    
T  42012287 ttttatactcgagaataaaatttagtaaatttgtaacaaacata--gacatatgtatttctatcattttattccc 42012215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 129 - 218
Target Start/End: Complemental strand, 15200641 - 15200554
Alignment:
Q  129 aataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccctaaaatctgcgaatatcacttgaaacaa 218  Q
    ||||||||||||||||||| |||||||||||   | |||||||||| ||||||||||||  | |||||||   ||||| |||||||||||    
T  15200641 aataaaatttaataaatttataacaaacata--gacatatatatttatatcattttattttcaaaaatctataaatataacttgaaacaa 15200554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 4765744 - 4765699
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||    
T  4765744 atgaatttattcccatctccatgggaactttattcccacccttttc 4765699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 14207005 - 14206960
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||    
T  14207005 atgaatttattcccatctccatgggaactttattcccacccttttc 14206960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 19065689 - 19065644
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||    
T  19065689 atgaatttattcccatctccatgggaactttattcccacccttttc 19065644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 22936096 - 22936051
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||    
T  22936096 atgaatttattcccatctccatgggaactttattcccacccttttc 22936051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 27481244 - 27481289
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||| |||||||||||||||||||||| ||||||||||    
T  27481244 atgaatttattctcatcttcatgggaactttattcccacccttttc 27481289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 28602443 - 28602488
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||    
T  28602443 atgaatttattcccatctccatgggaactttattcccacccttttc 28602488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 32535824 - 32535869
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||    
T  32535824 atgaatttattcccatctccatgggaactttattcccacccttttc 32535869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 110 - 166
Target Start/End: Complemental strand, 35602937 - 35602881
Alignment:
Q  110 gaaacgttttatactctgaaataaaatttaataaatttgtaacaaacataagcatat 166  Q
    ||||| |||||| ||| |||||||||||||||||| |||||||||| ||| ||||||    
T  35602937 gaaacattttatcctcggaaataaaatttaataaacttgtaacaaatatatgcatat 35602881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 12970638 - 12970566
Alignment:
Q  116 ttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccc 190  Q
    |||||||| | | ||||||||||| |||| |||||||||||||| ||  ||||| ||| ||||||||||||||||    
T  12970638 ttttatacccgggaataaaatttagtaaacttgtaacaaacataggc--atatacattcctatcattttattccc 12970566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 115 - 213
Target Start/End: Original strand, 28429663 - 28429759
Alignment:
Q  115 gttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccctaaaatctgcgaatatcacttga 213  Q
    |||||||| || | ||||||||||| |||| |||||||||| ||| ||  || |||||||||||||||||||| |  | ||||| ||||||| ||||||    
T  28429663 gttttatattcgggaataaaatttagtaaacttgtaacaaatataggc--atgtatatttctatcattttatttctaagaatctacgaatataacttga 28429759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 127 - 189
Target Start/End: Original strand, 32535911 - 32535971
Alignment:
Q  127 gaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattcc 189  Q
    |||||||| |||| |||| |||||||||||||||  | ||||| |||||||||||||||||||    
T  32535911 gaaataaattttagtaaacttgtaacaaacataa--acatatacatttctatcattttattcc 32535971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 128 - 170
Target Start/End: Complemental strand, 830116 - 830074
Alignment:
Q  128 aaataaaatttaataaatttgtaacaaacataagcatatatat 170  Q
    ||||||||||||||||| ||||||||||||||  |||||||||    
T  830116 aaataaaatttaataaacttgtaacaaacatattcatatatat 830074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 129 - 167
Target Start/End: Original strand, 1664706 - 1664744
Alignment:
Q  129 aataaaatttaataaatttgtaacaaacataagcatata 167  Q
    ||||||||||| | |||||||||||||||||||||||||    
T  1664706 aataaaatttagtcaatttgtaacaaacataagcatata 1664744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 14206916 - 14206857
Alignment:
Q  129 aataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccc 190  Q
    |||||| |||| |||| |||||||||||||| ||  ||||| ||||||||||||||||||||    
T  14206916 aataaattttagtaaacttgtaacaaacataggc--atatacatttctatcattttattccc 14206857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 18412185 - 18412244
Alignment:
Q  129 aataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccc 190  Q
    ||||||||||| |||| |||||||||||||| ||  ||||| ||| ||||||||||||||||    
T  18412185 aataaaatttagtaaacttgtaacaaacataggc--atatacattcctatcattttattccc 18412244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 116 - 197
Target Start/End: Original strand, 27481320 - 27481399
Alignment:
Q  116 ttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccctaaaatc 197  Q
    |||||||| | | ||||||||||| |||| |||||||||||||| ||  ||||| ||| ||||||||||||| || ||||||    
T  27481320 ttttatacccgggaataaaatttagtaaacttgtaacaaacataggc--atatacattcctatcattttatttccaaaaatc 27481399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 32 - 82
Target Start/End: Complemental strand, 41783811 - 41783761
Alignment:
Q  32 ttacacatgaatttgttcccatcttcatgggaactttattcacaccctttt 82  Q
    |||||||||||||||||| |||||| |||| |||||||||| || ||||||    
T  41783811 ttacacatgaatttgttcacatctttatggaaactttattcccaacctttt 41783761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 8406781 - 8406826
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||||||||| |||||||||||||||| |||| |||||    
T  8406781 atgaatttattcccatctccatgggaactttattcccaccattttc 8406826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 8646575 - 8646530
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||| ||||| |||||||||||||||| ||||||||||    
T  8646575 atgaatttattctcatctccatgggaactttattcccacccttttc 8646530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 116 - 188
Target Start/End: Original strand, 17251775 - 17251845
Alignment:
Q  116 ttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattc 188  Q
    ||||||||||   ||||||||||| |||| || ||||||||||||  | || |||||||||||||||||||||    
T  17251775 ttttatactcgagaataaaatttagtaaaattataacaaacataa--acatgtatatttctatcattttattc 17251845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 19089830 - 19089781
Alignment:
Q  111 aaacgttttatactctgaaataaaatttaataaatttgtaacaaacataa 160  Q
    |||||||||||||||   |||||||||||||||| || ||||||||||||    
T  19089830 aaacgttttatactcaagaataaaatttaataaacttataacaaacataa 19089781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 129 - 188
Target Start/End: Complemental strand, 11855750 - 11855693
Alignment:
Q  129 aataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattc 188  Q
    ||||||||||| |||| |||||||||||||| ||  ||||| ||| ||||||||||||||    
T  11855750 aataaaatttagtaaacttgtaacaaacataggc--atatacattcctatcattttattc 11855693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 87
Target Start/End: Original strand, 17251692 - 17251748
Alignment:
Q  31 gttacacatgaatttgttcccatcttcatgggaactttattcacacccttttctttg 87  Q
    ||||||||||||||| ||  ||||||||||| |||||||||| || | |||||||||    
T  17251692 gttacacatgaatttattttcatcttcatggaaactttattcccatcattttctttg 17251748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 116 - 215
Target Start/End: Original strand, 27480972 - 27481069
Alignment:
Q  116 ttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccctaaaatctgcgaatatcacttgaaa 215  Q
    |||||||| | | ||||||||||| |||| ||||||||||||||   | ||| ||||| |||||||||||||| | ||||||  | ||||| ||||||||    
T  27480972 ttttatacacaggaataaaatttagtaaacttgtaacaaacata--gacatacatattcctatcattttattctcaaaaatcaacaaatataacttgaaa 27481069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 38 - 82
Target Start/End: Complemental strand, 29543199 - 29543155
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacaccctttt 82  Q
    |||||||| ||| ||||| |||||||||||||||| |||||||||    
T  29543199 atgaatttattctcatctccatgggaactttattcccaccctttt 29543155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 87
Target Start/End: Complemental strand, 40275930 - 40275890
Alignment:
Q  47 ttcccatcttcatgggaactttattcacacccttttctttg 87  Q
    |||||||||||||||||||||||||| || | |||||||||    
T  40275930 ttcccatcttcatgggaactttattcccatcattttctttg 40275890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 51 - 83
Target Start/End: Complemental strand, 43347066 - 43347034
Alignment:
Q  51 catcttcatgggaactttattcacacccttttc 83  Q
    |||||||||||||||||||||| ||||||||||    
T  43347066 catcttcatgggaactttattcccacccttttc 43347034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 129 - 188
Target Start/End: Complemental strand, 29421584 - 29421527
Alignment:
Q  129 aataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattc 188  Q
    |||||||||||||||| |||||||||||||||  | ||||||||||||||||||||||||    
T  29421584 aataaaatttaataaacttgtaacaaacataa--acatatatatttctatcattttattc 29421527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 5020677 - 5020632
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| |||||||||||||||||||||||||| ||||||||||    
T  5020677 atgaatttattcccatcttcatgggaactttattcccacccttttc 5020632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 32661041 - 32660969
Alignment:
Q  116 ttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccc 190  Q
    |||||||| | | |||||||||||||||| |||||||||||||| ||  ||||| ||| ||||||||||||||||    
T  32661041 ttttatacccgggaataaaatttaataaacttgtaacaaacataggc--atatacattcctatcattttattccc 32660969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 37392654 - 37392582
Alignment:
Q  116 ttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccc 190  Q
    |||||||| | | |||||||||||||||| |||||||||||||| ||  ||||| ||| ||||||||||||||||    
T  37392654 ttttatacccgggaataaaatttaataaacttgtaacaaacataggc--atatacattcctatcattttattccc 37392582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 111 - 188
Target Start/End: Complemental strand, 21137245 - 21137170
Alignment:
Q  111 aaacgttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattc 188  Q
    |||| |||||||| | | ||||||||||| |||| |||||||||||||| ||  |||||||||||||| |||||||||    
T  21137245 aaacattttatacccgggaataaaatttagtaaacttgtaacaaacataggc--atatatatttctattattttattc 21137170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 129 - 187
Target Start/End: Original strand, 44161730 - 44161788
Alignment:
Q  129 aataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttatt 187  Q
    ||||||||||| ||||||| ||| |||||||| ||||||||| ||| ||||||||||||    
T  44161730 aataaaatttagtaaatttataataaacataaacatatatatttttttatcattttatt 44161788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 87
Target Start/End: Original strand, 3049896 - 3049945
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttctttg 87  Q
    |||||||| ||| ||||| |||||||||||||||| ||||||||||||||    
T  3049896 atgaatttattctcatctccatgggaactttattcccacccttttctttg 3049945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 7931126 - 7931171
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||    
T  7931126 atgaatttattcccatctccatgggaactttattcccacccttttc 7931171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 129 - 189
Target Start/End: Complemental strand, 10896312 - 10896254
Alignment:
Q  129 aataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattcc 189  Q
    |||||| |||| ||||||||||||||||||| ||  ||||| |||||||||||||||||||    
T  10896312 aataaattttagtaaatttgtaacaaacataggc--atatacatttctatcattttattcc 10896254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 32661118 - 32661073
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||    
T  32661118 atgaatttattcccatctccatgggaactttattcccacccttttc 32661073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 35818608 - 35818563
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||    
T  35818608 atgaatttattcccatctccatgggaactttattcccacccttttc 35818563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 37392730 - 37392685
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||    
T  37392730 atgaatttattcccatctccatgggaactttattcccacccttttc 37392685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 38 - 82
Target Start/End: Complemental strand, 10896400 - 10896356
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacaccctttt 82  Q
    |||||||| ||||||||| |||||||||||||||| |||||||||    
T  10896400 atgaatttattcccatctccatgggaactttattcccaccctttt 10896356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 15226865 - 15226901
Alignment:
Q  51 catcttcatgggaactttattcacacccttttctttg 87  Q
    |||||||||||||||||||||| ||||||||||||||    
T  15226865 catcttcatgggaactttattcccacccttttctttg 15226901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 38 - 82
Target Start/End: Original strand, 26062031 - 26062075
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacaccctttt 82  Q
    |||||||| ||||||||| |||||||||||||||| |||||||||    
T  26062031 atgaatttattcccatctccatgggaactttattcccaccctttt 26062075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 38 - 82
Target Start/End: Original strand, 38363968 - 38364012
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacaccctttt 82  Q
    |||||||| ||||||||| |||||||||||||||| |||||||||    
T  38363968 atgaatttattcccatctccatgggaactttattcccaccctttt 38364012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 190
Target Start/End: Original strand, 3049972 - 3050044
Alignment:
Q  116 ttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccc 190  Q
    |||||||| | | ||||||||||| |||| |||||||||||||| ||  ||||| ||| ||||||||||||||||    
T  3049972 ttttatacccgggaataaaatttagtaaacttgtaacaaacataggc--atatacattcctatcattttattccc 3050044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 129 - 187
Target Start/End: Original strand, 7317349 - 7317405
Alignment:
Q  129 aataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttatt 187  Q
    ||||||||||| |||| |||||||||||||| ||  ||||||||| |||||||||||||    
T  7317349 aataaaatttagtaaacttgtaacaaacataggc--atatatattcctatcattttatt 7317405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 218
Target Start/End: Original strand, 15226927 - 15227027
Alignment:
Q  116 ttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccctaaaatctgcgaatatcacttgaaa 215  Q
    |||||||| | ||||||||||||| |||| ||||||||||||||| ||||| |||  || ||| |||||||||     ||||| ||||||| ||||||||    
T  15226927 ttttatacccggaaataaaatttagtaaacttgtaacaaacataaacatatgtat--ttatatgattttattcagaggaatctacgaatataacttgaaa 15227024  T
Q  216 caa 218  Q
    |||    
T  15227025 caa 15227027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 218
Target Start/End: Complemental strand, 16219055 - 16218951
Alignment:
Q  112 aacgttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccctaaaatctgcgaatatcactt 211  Q
    ||||||||| || | | |||||||| || |||| |||||||||||||| ||  ||| ||||||||||| ||||||||||  ||| || ||||||| | ||    
T  16219055 aacgttttaaaccccggaataaaatctagtaaacttgtaacaaacataggc--atacatatttctatcgttttattcccagaaaactacgaatataattt 16218958  T
Q  212 gaaacaa 218  Q
    |||||||    
T  16218957 gaaacaa 16218951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 16313615 - 16313543
Alignment:
Q  116 ttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccc 190  Q
    |||||||| | | ||||||||||| |||| |||||||||||||| |  |||||| ||| ||||||||||||||||    
T  16313615 ttttatacccgggaataaaatttagtaaacttgtaacaaacatagg--tatatacattcctatcattttattccc 16313543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 190
Target Start/End: Original strand, 18298075 - 18298147
Alignment:
Q  116 ttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccc 190  Q
    |||||||| | | ||||||||||| |||| |||||||||||||| |  |||||| ||| ||||||||||||||||    
T  18298075 ttttatacccgggaataaaatttagtaaacttgtaacaaacatagg--tatatacattcctatcattttattccc 18298147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 12710621 - 12710680
Alignment:
Q  129 aataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccc 190  Q
    |||||| |||| |||| |||||||||||||| ||  ||||| ||||||||||||||||||||    
T  12710621 aataaattttagtaaacttgtaacaaacataggc--atatacatttctatcattttattccc 12710680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 129 - 218
Target Start/End: Complemental strand, 14764026 - 14763939
Alignment:
Q  129 aataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccctaaaatctgcgaatatcacttgaaacaa 218  Q
    ||||||||||| |||| ||| |||||||||| ||  || ||||||||||||||||||||| |  ||| ||  |||||| |||||||||||    
T  14764026 aataaaatttagtaaacttgaaacaaacatatgc--atgtatatttctatcattttattcacataaaactatgaatataacttgaaacaa 14763939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 18726714 - 18726655
Alignment:
Q  129 aataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccc 190  Q
    ||||||||||| |||| |||||||||||||| ||  ||||| ||| ||||||||||||||||    
T  18726714 aataaaatttagtaaacttgtaacaaacataggc--atatacattcctatcattttattccc 18726655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 26602033 - 26601974
Alignment:
Q  129 aataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccc 190  Q
    ||||||||||| |||| |||||||||||||| ||  ||||| ||| ||||||||||||||||    
T  26602033 aataaaatttagtaaacttgtaacaaacataggc--atatacattcctatcattttattccc 26601974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 12710532 - 12710577
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||| ||||| |||||||||||||||| ||||||||||    
T  12710532 atgaatttattctcatctccatgggaactttattcccacccttttc 12710577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 26602121 - 26602076
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||| ||||| |||||||||||||||| ||||||||||    
T  26602121 atgaatttattctcatctccatgggaactttattcccacccttttc 26602076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 116 - 176
Target Start/End: Complemental strand, 31117638 - 31117580
Alignment:
Q  116 ttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatatatttct 176  Q
    ||||||| || |||||||||||||||||| | ||||||||||||   ||||||||||||||    
T  31117638 ttttatattcggaaataaaatttaataaaatcgtaacaaacata--gatatatatatttct 31117580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 116 - 188
Target Start/End: Original strand, 35394353 - 35394423
Alignment:
Q  116 ttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattc 188  Q
    |||||||| | | ||||||||||| |||| ||||||||||||||   | |||||||||||| |||||||||||    
T  35394353 ttttatacccgggaataaaatttagtaaacttgtaacaaacata--gacatatatatttctttcattttattc 35394423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 38 - 86
Target Start/End: Complemental strand, 6805807 - 6805759
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttcttt 86  Q
    |||||||| ||| ||||| |||| ||||||||||| |||||||||||||    
T  6805807 atgaatttattctcatctccatgagaactttattctcacccttttcttt 6805759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 33444795 - 33444759
Alignment:
Q  51 catcttcatgggaactttattcacacccttttctttg 87  Q
    |||||||||||||||||||||| |||| |||||||||    
T  33444795 catcttcatgggaactttattcccaccattttctttg 33444759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 111 - 190
Target Start/End: Original strand, 41432699 - 41432775
Alignment:
Q  111 aaacgttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccc 190  Q
    ||||||||||||| | | ||||||||||| |||| |||||||||||||||  | || | |||| ||||||||||||||||    
T  41432699 aaacgttttatac-cgggaataaaatttagtaaacttgtaacaaacataa--acatgtgtattcctatcattttattccc 41432775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 116 - 218
Target Start/End: Complemental strand, 3673 - 3573
Alignment:
Q  116 ttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccctaaaatctgcgaatatcacttgaaa 215  Q
    |||||||||| | ||||||||||| |||| |||||||||||||| ||  |||||||||| ||| ||||||||||   |||||| | ||||| ||||||||    
T  3673 ttttatactcgggaataaaatttagtaaacttgtaacaaacataggc--atatatatttttataattttattcctagaaatctacaaatataacttgaaa 3576  T
Q  216 caa 218  Q
    |||    
T  3575 caa 3573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0662 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0662
Description:

Target: scaffold0662; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 116 - 218
Target Start/End: Original strand, 4431 - 4531
Alignment:
Q  116 ttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccctaaaatctgcgaatatcacttgaaa 215  Q
    |||||||||| | ||||||||||| |||| |||||||||||||| ||  |||||||||| ||| ||||||||||   |||||| | ||||| ||||||||    
T  4431 ttttatactcgggaataaaatttagtaaacttgtaacaaacataggc--atatatatttttataattttattcctagaaatctacaaatataacttgaaa 4528  T
Q  216 caa 218  Q
    |||    
T  4529 caa 4531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000003; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 1316906 - 1316951
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| |||||||||||||||||||||||||| ||||||||||    
T  1316906 atgaatttattcccatcttcatgggaactttattcccacccttttc 1316951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 38 - 87
Target Start/End: Original strand, 8029190 - 8029239
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttctttg 87  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||||||    
T  8029190 atgaatttattcccatctccatgggaactttattcccacccttttctttg 8029239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 2657587 - 2657632
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||    
T  2657587 atgaatttattcccatctccatgggaactttattcccacccttttc 2657632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 7344267 - 7344222
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||    
T  7344267 atgaatttattcccatctccatgggaactttattcccacccttttc 7344222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 87
Target Start/End: Complemental strand, 346021 - 345966
Alignment:
Q  32 ttacacatgaatttgttcccatcttcatgggaactttattcacacccttttctttg 87  Q
    |||| ||||||||| ||| ||||| ||| |||||||||||| ||||||||||||||    
T  346021 ttactcatgaatttattctcatctccattggaactttattcccacccttttctttg 345966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 190
Target Start/End: Original strand, 2657663 - 2657735
Alignment:
Q  116 ttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccc 190  Q
    |||||||| | | ||||||||||| |||| |||||||||||||| |  |||||| ||| ||||||||||||||||    
T  2657663 ttttatacccgggaataaaatttagtaaacttgtaacaaacatagg--tatatacattcctatcattttattccc 2657735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 7053678 - 7053606
Alignment:
Q  116 ttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccc 190  Q
    |||||||| | | ||||||||||| |||| |||||||||||||| ||  ||||| ||| ||||||||||||||||    
T  7053678 ttttatacccaggaataaaatttagtaaacttgtaacaaacataggc--atatacattcctatcattttattccc 7053606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 47 - 82
Target Start/End: Complemental strand, 10849959 - 10849924
Alignment:
Q  47 ttcccatcttcatgggaactttattcacaccctttt 82  Q
    |||||||||||||||||||||||||| |||||||||    
T  10849959 ttcccatcttcatgggaactttattcccaccctttt 10849924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 33 - 87
Target Start/End: Complemental strand, 6705954 - 6705900
Alignment:
Q  33 tacacatgaatttgttcccatcttcatgggaactttattcacacccttttctttg 87  Q
    |||| ||||| || ||| ||||| |||||||||||||||| ||||||||||||||    
T  6705954 tacatatgaaattattctcatctccatgggaactttattcccacccttttctttg 6705900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 14170989 - 14171048
Alignment:
Q  129 aataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccc 190  Q
    ||||||||||| |||| |||||||||||||| ||  ||||| ||| ||||||||||||||||    
T  14170989 aataaaatttagtaaacttgtaacaaacataggc--atatagattcctatcattttattccc 14171048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 189
Target Start/End: Complemental strand, 6705860 - 6705802
Alignment:
Q  129 aataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattcc 189  Q
    ||||||||||| |||| ||||||||||||||   | ||||||||||||| |||||||||||    
T  6705860 aataaaatttagtaaacttgtaacaaacata--gacatatatatttctaccattttattcc 6705802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 7053762 - 7053717
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||||||||| |||||||||||||||| |||| |||||    
T  7053762 atgaatttattcccatctccatgggaactttattcccaccattttc 7053717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 79
Target Start/End: Complemental strand, 10246300 - 10246259
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacaccct 79  Q
    |||||||| ||||||||| |||||||||||||||| ||||||    
T  10246300 atgaatttattcccatctccatgggaactttattcccaccct 10246259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 18897808 - 18897853
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||||||||| |||||||||||||||  ||||||||||    
T  18897808 atgaatttattcccatctccatgggaactttatttccacccttttc 18897853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 116 - 218
Target Start/End: Complemental strand, 29060 - 28960
Alignment:
Q  116 ttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccctaaaatctgcgaatatcacttgaaa 215  Q
    |||||||| | | ||||||||||| |||| |||||||||||||| ||  ||||| ||| |||||||||||||||| ||||||  | | ||| ||||||||    
T  29060 ttttatacccgggaataaaatttagtaaacttgtaacaaacataggc--atatacattcctatcattttattcccgaaaatcaacaattataacttgaaa 28963  T
Q  216 caa 218  Q
    |||    
T  28962 caa 28960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 36; Significance: 0.00000000004; HSPs: 5)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 116 - 190
Target Start/End: Original strand, 201888 - 201960
Alignment:
Q  116 ttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccc 190  Q
    |||||||| | ||||||||||||| |||| |||||||||||||| ||  ||||| ||| ||||||||||||||||    
T  201888 ttttatacccggaaataaaatttagtaaacttgtaacaaacataggc--atatacattcctatcattttattccc 201960  T

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Target: scaffold0006; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 33 - 87
Target Start/End: Original strand, 143495 - 143549
Alignment:
Q  33 tacacatgaatttgttcccatcttcatgggaactttattcacacccttttctttg 87  Q
    |||| |||||||| ||| ||||| |||||||||||||||| |||| |||||||||    
T  143495 tacatatgaatttattctcatctccatgggaactttattcccaccattttctttg 143549  T

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Target: scaffold0006; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 201812 - 201857
Alignment:
Q  38 atgaatttgttcccatcttcatgggaactttattcacacccttttc 83  Q
    |||||||| ||| ||||| |||||||||||||||| ||||||||||    
T  201812 atgaatttattctcatctccatgggaactttattcccacccttttc 201857  T

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Target: scaffold0006; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 116 - 195
Target Start/End: Original strand, 119283 - 119360
Alignment:
Q  116 ttttatactctgaaataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattccctaaaa 195  Q
    ||||||||||   ||||||||||| |||| ||||||||||||||   | || ||||||||||||||| ||||||| ||||    
T  119283 ttttatactcatgaataaaatttagtaaacttgtaacaaacata--gacatgtatatttctatcattgtattcccaaaaa 119360  T

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Target: scaffold0006; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 129 - 188
Target Start/End: Original strand, 143589 - 143646
Alignment:
Q  129 aataaaatttaataaatttgtaacaaacataagcatatatatatttctatcattttattc 188  Q
    ||||||||||| |||| ||||||||||| ||  |||||  ||||||||||||||||||||    
T  143589 aataaaatttagtaaacttgtaacaaacgtatacatat--atatttctatcattttattc 143646  T

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Target: scaffold0238 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 23500 - 23431
Alignment:
Q  20 attataatagg--gttacacatgaatttgttcccatcttcatgggaactttattcacacccttttctttg 87  Q
    |||||||||||  ||||||||||||||| ||  ||||||||||| |||||||||| |||| |||||||||    
T  23500 attataataggtagttacacatgaatttattttcatcttcatggaaactttattcccaccgttttctttg 23431  T

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