View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2587_high_1 (Length: 799)

Name: NF2587_high_1
Description: NF2587
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2587_high_1
NF2587_high_1
[»] chr4 (1 HSPs)
chr4 (14-790)||(45284206-45284982)


Alignment Details
Target: chr4 (Bit Score: 757; Significance: 0; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 757; E-Value: 0
Query Start/End: Original strand, 14 - 790
Target Start/End: Complemental strand, 45284982 - 45284206
Alignment:
Q  14 attagaaggagaatcctcagataaagtgagtgtttcatcaaccatttgtttattttgcaatccatgcagcatatctatattctttctcatatctaccatc 113  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  45284982 attagaaggagaatcctcggataaagtgagtgtttcatcaaccatttgtttattttgcaatccatgcagcatatctatattctttctcatatctactatc 45284883  T
Q  114 tcttgttgcgcttgatcattatcttttgtagctaattgaatttcctcgtctttctgatacaacattccaatattctgtttctcaactttaatagcagcaa 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45284882 tcttgttgcgcttgatcattatcttttgtagctaattgaatttcctcgtctttctgatacaacattccaatattctgtttctcaactttaatagcagcaa 45284783  T
Q  214 gttttgacctgtgaacacgttcattaagctcatttacttgatgcagaagttcttctttctgttccttttccatcttcaactcattttccaactgttccgc 313  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45284782 gttttgacctgtgaacacgttcattaagctcatttacttgatgcagaagttcttctttctgttccttttccatcttcaactcattttccaactgttccgc 45284683  T
Q  314 cttagtgacagcattcaattctgaatctctagcagcaaaaatatcagtatctttgttcagaagctctctttgtgtggccttcaattcactcaaaacatgt 413  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  45284682 cttagtgacagcattcaattctgaatctctagcagcaaaaatatcagtatctttgttcagaagctctctttgtgtggacttcaattcactcaaaacatgt 45284583  T
Q  414 gaaagttggtcccgaacttttacagtttctaatctaagatcagccatctctttcatcattgattcaagctcgtctttgctactagctctaccctctgaat 513  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45284582 gaaagttggtcccgaacttttacagtttctaatctaagatcagccatctctttcatcattgattcaagctcgtctttgctactagctctaccctctgaat 45284483  T
Q  514 gttcgttcacatacttgtttctttcaatatcagagtttttcaacaaggtagacaattcctgaatcatcttttggttttgttccggcttaagaagtgcttt 613  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  45284482 gttcgttcacatacttgtttctttcaatatcagagtttttcaacaaggtagacaattcctgaatcatcttttggttttgttctggcttaagaagtgcttt 45284383  T
Q  614 gatgtgtgcaacatgctttgcttctaattgcaccttgtagctggccaattccgttgtcaaatcctcaatctctttttcatagtcacgctggcatacaaat 713  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45284382 gatgtgtgcaacatgctttgcttctaattgcaccttgtagctggccaattccgttgtcaaatcctcaatctctttttcatagtcacgctggcatacaaat 45284283  T
Q  714 aaaagtgtaacaataatgacataaaaatcatgaattaattagatatctatctatgtatatagtccaattagtattat 790  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45284282 aaaagtgtgacaataatgacataaaaatcatgaattaattagatatctatctatgtatatagtccaattagtattat 45284206  T

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