View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2587_high_15 (Length: 382)

Name: NF2587_high_15
Description: NF2587
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2587_high_15
NF2587_high_15
[»] chr4 (65 HSPs)
chr4 (35-234)||(45644419-45644615)
chr4 (235-346)||(50678779-50678890)
chr4 (233-373)||(50679341-50679480)
chr4 (235-373)||(43051169-43051306)
chr4 (233-373)||(36096392-36096531)
chr4 (235-346)||(36095817-36095927)
chr4 (238-373)||(43050610-43050744)
chr4 (235-345)||(45830141-45830250)
chr4 (235-373)||(56505693-56505830)
chr4 (238-373)||(47219122-47219252)
chr4 (235-342)||(56506521-56506628)
chr4 (233-341)||(4239314-4239422)
chr4 (235-341)||(28196346-28196452)
chr4 (235-341)||(28196721-28196827)
chr4 (233-341)||(16555764-16555873)
chr4 (233-341)||(169387-169495)
chr4 (236-340)||(25161879-25161983)
chr4 (233-341)||(32703598-32703706)
chr4 (235-342)||(45828994-45829101)
chr4 (235-341)||(9380307-9380413)
chr4 (235-341)||(9380689-9380795)
chr4 (235-341)||(26207694-26207800)
chr4 (235-341)||(39744413-39744519)
chr4 (234-341)||(23540200-23540307)
chr4 (230-341)||(43292306-43292416)
chr4 (235-341)||(9023244-9023350)
chr4 (235-341)||(9023628-9023734)
chr4 (236-334)||(11529169-11529267)
chr4 (235-341)||(32703225-32703331)
chr4 (238-341)||(13198606-13198711)
chr4 (235-341)||(169013-169120)
chr4 (235-341)||(3930427-3930533)
chr4 (234-341)||(39086571-39086678)
chr4 (235-341)||(293165-293271)
chr4 (235-341)||(39744030-39744136)
chr4 (236-341)||(43292038-43292143)
chr4 (235-338)||(48405962-48406064)
chr4 (235-341)||(292782-292888)
chr4 (263-341)||(23539867-23539945)
chr4 (263-341)||(26207388-26207466)
chr4 (235-325)||(35393741-35393829)
chr4 (263-341)||(44468871-44468949)
chr4 (263-341)||(48406333-48406411)
chr4 (235-324)||(18077167-18077256)
chr4 (257-341)||(25162261-25162345)
chr4 (239-325)||(49178779-49178866)
chr4 (257-325)||(39415246-39415314)
chr4 (256-334)||(11530154-11530231)
chr4 (235-325)||(13198870-13198960)
chr4 (236-325)||(8488447-8488534)
chr4 (235-296)||(24775776-24775837)
chr4 (235-297)||(11241653-11241714)
chr4 (263-341)||(12758152-12758230)
chr4 (235-331)||(39415485-39415578)
chr4 (262-335)||(23432504-23432577)
chr4 (258-342)||(23433433-23433516)
chr4 (235-289)||(8182172-8182227)
chr4 (236-341)||(22681576-22681686)
chr4 (257-288)||(25225399-25225430)
chr4 (236-289)||(8181992-8182046)
chr4 (263-341)||(12757794-12757872)
chr4 (235-289)||(16555515-16555569)
chr4 (268-313)||(39912463-39912508)
chr4 (233-325)||(3930177-3930268)
chr4 (306-341)||(11241637-11241673)
[»] scaffold0328 (2 HSPs)
scaffold0328 (235-373)||(6712-6849)
scaffold0328 (232-373)||(6149-6288)
[»] chr8 (56 HSPs)
chr8 (233-373)||(39723965-39724104)
chr8 (235-346)||(9823304-9823415)
chr8 (233-346)||(13027224-13027337)
chr8 (235-373)||(13026635-13026772)
chr8 (233-373)||(22851388-22851527)
chr8 (234-373)||(39723400-39723539)
chr8 (233-373)||(3307336-3307475)
chr8 (233-346)||(9822746-9822859)
chr8 (235-342)||(13936723-13936828)
chr8 (232-341)||(41662350-41662460)
chr8 (235-373)||(13937307-13937443)
chr8 (237-341)||(15442765-15442869)
chr8 (235-341)||(24473716-24473822)
chr8 (235-341)||(37396708-37396814)
chr8 (237-341)||(765736-765841)
chr8 (233-341)||(15156132-15156241)
chr8 (233-341)||(43245869-43245978)
chr8 (235-341)||(6092777-6092881)
chr8 (235-341)||(12281124-12281231)
chr8 (258-341)||(15042168-15042251)
chr8 (235-341)||(6199044-6199150)
chr8 (235-341)||(20861586-20861692)
chr8 (233-341)||(37397093-37397201)
chr8 (235-341)||(34498503-34498609)
chr8 (233-341)||(24473341-24473449)
chr8 (233-341)||(34498120-34498227)
chr8 (235-341)||(17431287-17431393)
chr8 (233-326)||(37752082-37752176)
chr8 (235-341)||(41662521-41662627)
chr8 (233-341)||(9623500-9623608)
chr8 (237-341)||(15444213-15444317)
chr8 (233-325)||(16929207-16929298)
chr8 (235-341)||(16928942-16929047)
chr8 (238-341)||(33727053-33727156)
chr8 (256-341)||(74932-75017)
chr8 (267-341)||(6198690-6198764)
chr8 (235-325)||(15155883-15155973)
chr8 (233-341)||(16169172-16169279)
chr8 (233-325)||(37752381-37752472)
chr8 (238-341)||(15444595-15444698)
chr8 (236-287)||(22851958-22852009)
chr8 (275-341)||(37752154-37752221)
chr8 (235-325)||(43246139-43246230)
chr8 (263-313)||(25439102-25439152)
chr8 (233-325)||(12281390-12281482)
chr8 (233-297)||(23123336-23123400)
chr8 (304-373)||(22851903-22851970)
chr8 (263-341)||(2856554-2856632)
chr8 (233-331)||(3463903-3464001)
chr8 (237-291)||(25438794-25438848)
chr8 (237-325)||(74688-74773)
chr8 (233-325)||(34313763-34313852)
chr8 (257-341)||(15043731-15043815)
chr8 (233-286)||(11007561-11007613)
chr8 (257-325)||(9465838-9465906)
chr8 (233-341)||(16169555-16169663)
[»] chr7 (54 HSPs)
chr7 (233-373)||(44599487-44599626)
chr7 (235-373)||(13863313-13863450)
chr7 (235-346)||(44600078-44600189)
chr7 (235-373)||(13863875-13864010)
chr7 (235-342)||(8643713-8643820)
chr7 (233-341)||(37888831-37888939)
chr7 (235-342)||(46816258-46816365)
chr7 (235-341)||(10533034-10533140)
chr7 (233-341)||(3687604-3687712)
chr7 (233-341)||(13741555-13741663)
chr7 (233-341)||(29293294-29293402)
chr7 (235-341)||(9412272-9412379)
chr7 (235-341)||(20419272-20419378)
chr7 (235-341)||(22740156-22740262)
chr7 (235-341)||(37889207-37889313)
chr7 (235-341)||(37972344-37972450)
chr7 (234-341)||(9035240-9035348)
chr7 (238-341)||(18863970-18864073)
chr7 (238-341)||(20418891-20418994)
chr7 (235-341)||(3205041-3205147)
chr7 (235-341)||(17156967-17157073)
chr7 (235-341)||(29292922-29293028)
chr7 (235-341)||(37971960-37972066)
chr7 (233-341)||(36527746-36527854)
chr7 (235-341)||(9034867-9034974)
chr7 (235-341)||(13744181-13744286)
chr7 (235-341)||(38826861-38826967)
chr7 (263-341)||(3204695-3204773)
chr7 (263-341)||(18864350-18864428)
chr7 (238-341)||(42418976-42419079)
chr7 (234-341)||(48359319-48359424)
chr7 (267-341)||(48359606-48359680)
chr7 (238-330)||(22740550-22740641)
chr7 (233-341)||(29291990-29292097)
chr7 (235-341)||(42418591-42418697)
chr7 (233-289)||(13772901-13772957)
chr7 (237-289)||(34235978-34236030)
chr7 (262-342)||(46815195-46815275)
chr7 (233-288)||(38191566-38191621)
chr7 (235-325)||(9412023-9412113)
chr7 (235-325)||(23686683-23686771)
chr7 (235-296)||(13772641-13772702)
chr7 (236-296)||(18925315-18925373)
chr7 (235-296)||(33628653-33628714)
chr7 (236-326)||(5735253-5735344)
chr7 (233-325)||(3687351-3687445)
chr7 (269-325)||(5349497-5349550)
chr7 (304-341)||(5349709-5349747)
chr7 (234-298)||(5349724-5349785)
chr7 (233-287)||(18925060-18925114)
chr7 (263-341)||(36527411-36527489)
chr7 (237-325)||(29291808-29291896)
chr7 (236-318)||(8953863-8953941)
chr7 (263-291)||(16198975-16199003)
[»] chr6 (31 HSPs)
chr6 (233-346)||(33828988-33829101)
chr6 (235-373)||(33829553-33829690)
chr6 (234-341)||(33974247-33974354)
chr6 (233-341)||(18242103-18242212)
chr6 (235-341)||(3403936-3404043)
chr6 (234-341)||(10087806-10087913)
chr6 (235-341)||(7654496-7654602)
chr6 (233-341)||(32733944-32734052)
chr6 (235-337)||(21031979-21032081)
chr6 (257-341)||(30388311-30388394)
chr6 (224-325)||(10039665-10039764)
chr6 (233-325)||(11656746-11656838)
chr6 (233-341)||(22684306-22684413)
chr6 (233-341)||(22754655-22754762)
chr6 (235-330)||(2354769-2354864)
chr6 (233-296)||(3403715-3403778)
chr6 (263-341)||(29074320-29074398)
chr6 (263-341)||(29079084-29079162)
chr6 (263-341)||(29106893-29106971)
chr6 (236-341)||(22755038-22755142)
chr6 (233-341)||(2354407-2354514)
chr6 (235-331)||(31598231-31598326)
chr6 (263-341)||(13176647-13176725)
chr6 (235-325)||(18241854-18241944)
chr6 (238-341)||(32733560-32733663)
chr6 (262-341)||(2762510-2762590)
chr6 (233-325)||(30388060-30388150)
chr6 (235-325)||(21032243-21032334)
chr6 (235-289)||(13579651-13579704)
chr6 (268-341)||(13177004-13177077)
chr6 (303-340)||(23250840-23250877)
[»] chr5 (53 HSPs)
chr5 (233-345)||(18817555-18817667)
chr5 (235-346)||(18816952-18817063)
chr5 (235-373)||(11350808-11350944)
chr5 (238-346)||(11351371-11351478)
chr5 (109-231)||(34645243-34645366)
chr5 (233-341)||(18433013-18433122)
chr5 (235-341)||(12498567-12498673)
chr5 (235-341)||(25115757-25115864)
chr5 (235-341)||(25174849-25174956)
chr5 (235-341)||(12498876-12498982)
chr5 (235-341)||(26571112-26571218)
chr5 (236-341)||(22729388-22729492)
chr5 (233-341)||(3888237-3888345)
chr5 (257-341)||(42919326-42919410)
chr5 (238-341)||(21207229-21207332)
chr5 (235-341)||(26020450-26020557)
chr5 (263-341)||(19514554-19514632)
chr5 (238-341)||(43463759-43463861)
chr5 (263-341)||(3888610-3888688)
chr5 (235-341)||(19514911-19515017)
chr5 (235-341)||(25940521-25940627)
chr5 (235-341)||(26570729-26570835)
chr5 (235-341)||(43464140-43464245)
chr5 (238-341)||(2817152-2817254)
chr5 (238-341)||(11316922-11317025)
chr5 (238-312)||(31569910-31569983)
chr5 (235-341)||(34147458-34147564)
chr5 (268-341)||(34147172-34147245)
chr5 (257-341)||(34576888-34576972)
chr5 (230-341)||(22729003-22729112)
chr5 (235-325)||(18433281-18433370)
chr5 (235-297)||(22429188-22429249)
chr5 (235-325)||(25175115-25175205)
chr5 (235-313)||(37610202-37610279)
chr5 (235-313)||(37780320-37780397)
chr5 (233-313)||(37780718-37780798)
chr5 (235-325)||(22428934-22429021)
chr5 (233-288)||(23011077-23011131)
chr5 (234-325)||(34577129-34577218)
chr5 (263-341)||(10098889-10098967)
chr5 (263-341)||(37610567-37610644)
chr5 (263-341)||(41072162-41072240)
chr5 (235-289)||(25116061-25116115)
chr5 (236-341)||(25940961-25941067)
chr5 (235-326)||(16466708-16466796)
chr5 (233-330)||(30401880-30401977)
chr5 (233-313)||(10098517-10098597)
chr5 (235-342)||(41383117-41383220)
chr5 (257-287)||(16726100-16726130)
chr5 (304-341)||(22429172-22429210)
chr5 (235-289)||(33324838-33324892)
chr5 (237-313)||(2817551-2817626)
chr5 (257-297)||(9665577-9665617)
[»] chr2 (54 HSPs)
chr2 (235-346)||(2638820-2638931)
chr2 (235-346)||(2639425-2639536)
chr2 (235-346)||(26841587-26841698)
chr2 (233-373)||(26842155-26842294)
chr2 (238-346)||(7591204-7591312)
chr2 (236-346)||(18296077-18296187)
chr2 (233-346)||(7591793-7591906)
chr2 (233-341)||(26692768-26692876)
chr2 (235-341)||(30190923-30191030)
chr2 (238-341)||(8851151-8851254)
chr2 (234-341)||(38490789-38490895)
chr2 (235-335)||(24832331-24832432)
chr2 (233-341)||(7664621-7664729)
chr2 (235-341)||(20347411-20347518)
chr2 (235-341)||(7664248-7664354)
chr2 (235-341)||(41790860-41790966)
chr2 (238-341)||(40469676-40469780)
chr2 (235-341)||(6171404-6171510)
chr2 (238-341)||(26692399-26692502)
chr2 (235-341)||(8851531-8851636)
chr2 (263-341)||(16911217-16911295)
chr2 (263-341)||(17851350-17851428)
chr2 (235-297)||(18296685-18296747)
chr2 (235-313)||(37720204-37720282)
chr2 (233-325)||(11883890-11883982)
chr2 (233-341)||(17850976-17851083)
chr2 (235-342)||(5378661-5378768)
chr2 (235-342)||(5379906-5380013)
chr2 (235-341)||(11883623-11883730)
chr2 (234-341)||(16910826-16910933)
chr2 (238-341)||(41790494-41790596)
chr2 (263-341)||(7979593-7979671)
chr2 (263-341)||(19141797-19141875)
chr2 (233-341)||(26737728-26737837)
chr2 (257-341)||(32673090-32673175)
chr2 (233-325)||(40469425-40469517)
chr2 (242-341)||(6324924-6325023)
chr2 (304-373)||(18296639-18296707)
chr2 (263-341)||(5793475-5793553)
chr2 (235-341)||(7979951-7980056)
chr2 (237-338)||(6325298-6325399)
chr2 (233-325)||(30191189-30191281)
chr2 (263-313)||(18750102-18750152)
chr2 (235-325)||(20347163-20347252)
chr2 (233-296)||(18055309-18055372)
chr2 (237-339)||(19141446-19141547)
chr2 (235-287)||(29230282-29230334)
chr2 (235-289)||(26737482-26737534)
chr2 (233-287)||(6171154-6171207)
chr2 (238-287)||(29343584-29343633)
chr2 (230-287)||(40221308-40221364)
chr2 (235-287)||(6495723-6495775)
chr2 (235-287)||(17346037-17346088)
chr2 (233-325)||(32672840-32672932)
[»] chr1 (65 HSPs)
chr1 (235-346)||(49284409-49284520)
chr1 (233-346)||(6002235-6002348)
chr1 (237-373)||(6002810-6002946)
chr1 (258-373)||(49284972-49285086)
chr1 (235-341)||(39691948-39692054)
chr1 (233-341)||(9347124-9347232)
chr1 (235-341)||(47955306-47955413)
chr1 (233-341)||(27172114-27172221)
chr1 (233-341)||(48105064-48105172)
chr1 (235-341)||(32162991-32163097)
chr1 (235-341)||(44911025-44911131)
chr1 (232-341)||(50430029-50430138)
chr1 (233-341)||(13918444-13918552)
chr1 (233-341)||(26814692-26814800)
chr1 (237-341)||(50526420-50526524)
chr1 (238-341)||(46823846-46823949)
chr1 (238-341)||(48104681-48104784)
chr1 (235-341)||(20480168-20480273)
chr1 (235-341)||(26815067-26815173)
chr1 (235-341)||(28633720-28633826)
chr1 (233-341)||(6703842-6703950)
chr1 (233-297)||(48190769-48190833)
chr1 (233-341)||(50615569-50615676)
chr1 (233-341)||(50623397-50623504)
chr1 (238-341)||(28634105-28634208)
chr1 (235-341)||(999473-999578)
chr1 (263-341)||(9347499-9347577)
chr1 (235-341)||(27172490-27172595)
chr1 (233-341)||(21687023-21687131)
chr1 (238-341)||(22149649-22149750)
chr1 (233-341)||(49318114-49318221)
chr1 (238-341)||(42611188-42611291)
chr1 (238-341)||(44911385-44911488)
chr1 (234-341)||(49317751-49317857)
chr1 (235-297)||(8108985-8109047)
chr1 (263-341)||(46824226-46824304)
chr1 (233-341)||(20371300-20371408)
chr1 (235-296)||(48191348-48191409)
chr1 (234-341)||(41082908-41083015)
chr1 (233-341)||(42611562-42611670)
chr1 (235-342)||(19008697-19008804)
chr1 (235-325)||(31848158-31848246)
chr1 (235-341)||(33085671-33085775)
chr1 (235-341)||(4692381-4692487)
chr1 (267-341)||(6703492-6703566)
chr1 (235-341)||(50429656-50429762)
chr1 (236-341)||(13918815-13918920)
chr1 (237-341)||(17518551-17518653)
chr1 (233-310)||(20480591-20480667)
chr1 (230-325)||(47955572-47955667)
chr1 (304-346)||(48190811-48190853)
chr1 (233-311)||(49318421-49318498)
chr1 (262-341)||(24671283-24671360)
chr1 (238-313)||(999115-999189)
chr1 (304-373)||(48191302-48191369)
chr1 (235-289)||(13589659-13589712)
chr1 (235-325)||(17518303-17518392)
chr1 (263-313)||(20371066-20371116)
chr1 (263-341)||(21687415-21687493)
chr1 (267-341)||(44224067-44224141)
chr1 (263-341)||(50949513-50949591)
chr1 (263-305)||(32162757-32162799)
chr1 (263-313)||(47498327-47498377)
chr1 (265-311)||(50949191-50949237)
chr1 (238-285)||(31848019-31848067)
[»] chr3 (55 HSPs)
chr3 (233-341)||(8314011-8314119)
chr3 (233-341)||(27238848-27238956)
chr3 (235-341)||(48159897-48160003)
chr3 (233-341)||(20968967-20969075)
chr3 (238-342)||(1928381-1928484)
chr3 (234-341)||(10293607-10293715)
chr3 (234-341)||(21896459-21896565)
chr3 (235-341)||(40848909-40849015)
chr3 (233-341)||(42673244-42673351)
chr3 (233-341)||(48160281-48160389)
chr3 (234-341)||(47666283-47666390)
chr3 (235-341)||(40848521-40848626)
chr3 (235-341)||(53687888-53687994)
chr3 (236-341)||(22429159-22429264)
chr3 (234-341)||(42672977-42673083)
chr3 (263-341)||(10348747-10348825)
chr3 (263-341)||(27238493-27238571)
chr3 (233-341)||(24485408-24485515)
chr3 (233-341)||(53688251-53688358)
chr3 (235-337)||(47871073-47871175)
chr3 (263-341)||(22429544-22429622)
chr3 (263-341)||(24485049-24485127)
chr3 (233-341)||(3353126-3353231)
chr3 (238-341)||(9026739-9026839)
chr3 (238-341)||(26007567-26007670)
chr3 (263-341)||(3353500-3353577)
chr3 (235-325)||(18875155-18875245)
chr3 (235-341)||(26007182-26007287)
chr3 (263-341)||(36180582-36180660)
chr3 (267-341)||(42456144-42456217)
chr3 (235-316)||(10771504-10771584)
chr3 (233-325)||(10293873-10293965)
chr3 (233-341)||(44008349-44008456)
chr3 (234-325)||(17372297-17372387)
chr3 (234-325)||(42627511-42627600)
chr3 (235-325)||(20968718-20968808)
chr3 (233-342)||(28702276-28702382)
chr3 (235-297)||(45060863-45060925)
chr3 (263-313)||(53766191-53766241)
chr3 (233-297)||(1927770-1927834)
chr3 (235-286)||(17441066-17441117)
chr3 (235-297)||(21895657-21895720)
chr3 (233-291)||(3644781-3644839)
chr3 (238-296)||(14015957-14016014)
chr3 (236-341)||(10348480-10348585)
chr3 (239-336)||(4947263-4947362)
chr3 (262-325)||(13657472-13657536)
chr3 (235-311)||(36180968-36181044)
chr3 (303-341)||(18874957-18874996)
chr3 (306-341)||(21895700-21895735)
chr3 (235-288)||(18874882-18874935)
chr3 (234-283)||(45060595-45060644)
chr3 (235-325)||(47870823-47870910)
chr3 (238-289)||(13657621-13657673)
chr3 (233-341)||(44007965-44008073)
[»] scaffold0802 (2 HSPs)
scaffold0802 (233-341)||(1367-1476)
scaffold0802 (233-325)||(1116-1208)
[»] scaffold0110 (2 HSPs)
scaffold0110 (235-341)||(45754-45860)
scaffold0110 (235-325)||(45537-45626)
[»] scaffold0017 (2 HSPs)
scaffold0017 (230-341)||(185222-185333)
scaffold0017 (236-341)||(184840-184945)
[»] scaffold0319 (2 HSPs)
scaffold0319 (234-341)||(6644-6751)
scaffold0319 (235-325)||(6394-6485)
[»] scaffold0192 (1 HSPs)
scaffold0192 (235-341)||(25316-25423)
[»] scaffold0001 (3 HSPs)
scaffold0001 (233-324)||(438928-439019)
scaffold0001 (235-325)||(439165-439253)
scaffold0001 (235-331)||(183621-183716)
[»] scaffold0460 (2 HSPs)
scaffold0460 (235-341)||(330-436)
scaffold0460 (233-313)||(739-818)
[»] scaffold0041 (2 HSPs)
scaffold0041 (235-341)||(38643-38749)
scaffold0041 (268-341)||(38284-38357)
[»] scaffold0029 (1 HSPs)
scaffold0029 (235-341)||(9905-10012)
[»] scaffold0069 (2 HSPs)
scaffold0069 (233-341)||(50454-50562)
scaffold0069 (263-313)||(50101-50151)
[»] scaffold0176 (1 HSPs)
scaffold0176 (263-313)||(19648-19698)
[»] scaffold0015 (2 HSPs)
scaffold0015 (233-341)||(16851-16960)
scaffold0015 (233-325)||(17119-17211)
[»] scaffold0009 (1 HSPs)
scaffold0009 (235-325)||(205687-205774)
[»] scaffold0002 (1 HSPs)
scaffold0002 (235-341)||(411923-412028)
[»] scaffold1221 (1 HSPs)
scaffold1221 (233-291)||(1509-1566)
[»] scaffold0035 (1 HSPs)
scaffold0035 (236-287)||(72967-73018)
[»] scaffold0535 (1 HSPs)
scaffold0535 (235-337)||(10012-10114)
[»] scaffold0376 (1 HSPs)
scaffold0376 (235-291)||(7455-7510)


Alignment Details
Target: chr4 (Bit Score: 178; Significance: 6e-96; HSPs: 65)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 35 - 234
Target Start/End: Original strand, 45644419 - 45644615
Alignment:
Q  35 aaagatcacttatctactcggataatagttgtgaatagaatgctaatagaaaataatcaaaaaattactcatactgaattaataccattaaatgtaattg 134  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||   |||||||||||||||||||||||||    
T  45644419 aaagatcacttatctactcggataatagttgtgaatagaatgctaatagaaaacaatcaaaaaattactcat---gaattaataccattaaatgtaattg 45644515  T
Q  135 catcgaatggaaattacacccccattaaccaaattccattgaaaaactgatcttatcatatcgcactaattcaaaattagtactagtagaataataagtt 234  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45644516 catcgaatggaaattacaccaccattaaccaaattccattgaaaaactgatcttatcatatcgcactaattcaaaattagtactagtagaataataagtt 45644615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 235 - 346
Target Start/End: Original strand, 50678779 - 50678890
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50678779 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 50678878  T
Q  335 ctgatttggagg 346  Q
    ||||||||||||    
T  50678879 ctgatttggagg 50678890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 233 - 373
Target Start/End: Complemental strand, 50679480 - 50679341
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccct 332  Q
    |||||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50679480 ttggcttaattgcacttttcacccctatcttttgccaattgtacgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccct 50679381  T
Q  333 ttctgatttggaggnnnnnnnatgtgttttagtgatgatgt 373  Q
    ||||||||||||||       ||||||||||||||||||||    
T  50679380 ttctgatttggagg-ccccccatgtgttttagtgatgatgt 50679341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 235 - 373
Target Start/End: Complemental strand, 43051306 - 43051169
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  43051306 ggcttaattgcatttttcacccctatcttttgccaattgtgtgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccctcttt 43051207  T
Q  335 ctgatttggaggnnnnnnnatgtgttttagtgatgatgt 373  Q
    ||||||||||||       ||||||||||||||||||||    
T  43051206 ctgatttggagg-ccccccatgtgttttagtgatgatgt 43051169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 233 - 373
Target Start/End: Complemental strand, 36096531 - 36096392
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccct 332  Q
    |||| ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  36096531 ttggtttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatcttttttcccct 36096432  T
Q  333 ttctgatttggaggnnnnnnnatgtgttttagtgatgatgt 373  Q
    ||||||||||||||       ||||||||||||||||||||    
T  36096431 ttctgatttggagg-ccccccatgtgttttagtgatgatgt 36096392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 235 - 346
Target Start/End: Original strand, 36095817 - 36095927
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||    
T  36095817 ggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccctatcttttt-ccccttt 36095915  T
Q  335 ctgatttggagg 346  Q
    ||||||||||||    
T  36095916 ctgatttggagg 36095927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 238 - 373
Target Start/End: Original strand, 43050610 - 43050744
Alignment:
Q  238 ttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctg 337  Q
    ||||||||| |||||| | ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  43050610 ttaattgcacttttcatccctatcttttaccaattgtgcgattttgcaccccatgtttttaaacgagtgattttgcaccccatctttttccccctttctg 43050709  T
Q  338 atttggaggnnnnnnnatgtgttttagtgatgatgt 373  Q
    |||||||||       ||||||||||||||||||||    
T  43050710 atttggagg-ccctccatgtgttttagtgatgatgt 43050744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 235 - 345
Target Start/End: Complemental strand, 45830250 - 45830141
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||| ||| |||||||| |||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| |||||||    
T  45830250 ggcttaatcgcacttttcacccctatcttttgtcaattgtgcgattttacaccccatgtttttaaaagagcgattttgcaccccatcttttt-ccccttt 45830152  T
Q  335 ctgatttggag 345  Q
    |||||||||||    
T  45830151 ctgatttggag 45830141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 235 - 373
Target Start/End: Original strand, 56505693 - 56505830
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||||| ||||| || ||||||||||||||||||||||||||||||||||| |||||||  |||| ||||||||||||||||||||||||||||    
T  56505693 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttcccccttt 56505792  T
Q  335 ctgatttggaggnnnnnnnatgtgttttagtgatgatgt 373  Q
    ||| |||| |||       ||||||||||||||||||||    
T  56505793 ctggtttgaagg-ccccccatgtgttttagtgatgatgt 56505830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 238 - 373
Target Start/End: Complemental strand, 47219252 - 47219122
Alignment:
Q  238 ttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctg 337  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||| ||||||||| |||||||||||||||||    ||||    
T  47219252 ttaattgcatttttcacctctatcttttgctaattgtgcgattttgcaccttatgtttttaaaccagcgattttacaccccatctttttccc----tctg 47219157  T
Q  338 atttggaggnnnnnnnatgtgttttagtgatgatgt 373  Q
    |||||||||       ||||||||||||||||||||    
T  47219156 atttggagg-ccctccatgtgttttagtgatgatgt 47219122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 235 - 342
Target Start/End: Complemental strand, 56506628 - 56506521
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||||| ||||||||  ||||||||||||||||||| |||||| || ||||||||||||  |||||||||||||||||||| ||||||||||||    
T  56506628 ggcttaattgcacttttcacccttatcttttgccaattgtgcaattttgtactccatgtttttaattgagcgattttgcaccccatcattttcccccttt 56506529  T
Q  335 ctgatttg 342  Q
    ||||||||    
T  56506528 ctgatttg 56506521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 233 - 341
Target Start/End: Complemental strand, 4239422 - 4239314
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccct 332  Q
    |||||||||||||| ||||  || ||||  |||||||||||||||||||||||||||||  |||||||||||||||||||| ||| || |||||||||||    
T  4239422 ttggcttaattgcactttttccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatatttttccccct 4239323  T
Q  333 ttctgattt 341  Q
    |||||||||    
T  4239322 ttctgattt 4239314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 235 - 341
Target Start/End: Original strand, 28196346 - 28196452
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||||| ||||| || ||||  |||||||||||||||||||||||||||||  |||||||||||||||||||| ||| ||  ||||||||||||    
T  28196346 ggcttaattgcacttttcccccctataatttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 28196445  T
Q  335 ctgattt 341  Q
    |||||||    
T  28196446 ctgattt 28196452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 235 - 341
Target Start/End: Complemental strand, 28196827 - 28196721
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||||| ||||| || ||||  |||||||||||||||||||||||||||||  |||||||||||||||||||| ||| ||  ||||||||||||    
T  28196827 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 28196728  T
Q  335 ctgattt 341  Q
    |||||||    
T  28196727 ctgattt 28196721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 233 - 341
Target Start/End: Complemental strand, 16555873 - 16555764
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatcttttt-ccccc 331  Q
    |||||||||||||| ||||| ||  |||||||||| ||||||||||||||||||||||| |||||    ||||||||||||||||||||||||| |||||    
T  16555873 ttggcttaattgcacttttcccccttatcttttgctaattgtgcgattttgcaccccatctttttttttgagcgattttgcaccccatctttttgccccc 16555774  T
Q  332 tttctgattt 341  Q
    ||||||||||    
T  16555773 tttctgattt 16555764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 233 - 341
Target Start/End: Complemental strand, 169495 - 169387
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccct 332  Q
    |||||||||||||||||||| || ||||  |||| ||||||||||||||||||||||||  |||||||||||||||||||| ||| ||  ||||||||||    
T  169495 ttggcttaattgcatttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccct 169396  T
Q  333 ttctgattt 341  Q
    || ||||||    
T  169395 ttttgattt 169387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 236 - 340
Target Start/End: Original strand, 25161879 - 25161983
Alignment:
Q  236 gcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttc 335  Q
    ||||||||||| ||||| || ||||  |||||||||||||||||||||||||||||  |||||||||||||||||||| ||| ||  |||||||||||||    
T  25161879 gcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttc 25161978  T
Q  336 tgatt 340  Q
    |||||    
T  25161979 tgatt 25161983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 233 - 341
Target Start/End: Complemental strand, 32703706 - 32703598
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccct 332  Q
    |||||||||||||| ||||| || ||||  |||||||||||||||||||||||||||||  |||||||||||||||||||| ||| ||  |||||||| |    
T  32703706 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccctt 32703607  T
Q  333 ttctgattt 341  Q
    |||||||||    
T  32703606 ttctgattt 32703598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 235 - 342
Target Start/End: Original strand, 45828994 - 45829101
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||| | |||||||  ||||||||| ||||||||||||||||| |||| ||||| |||||| |||||||||||| |||||||||||||| | ||    
T  45828994 ggcttaattgtacttttcactcctatcttttaccaattgtgcgattttgtacccaatgttattaaacaagcgattttgcatcccatctttttccctcgtt 45829093  T
Q  335 ctgatttg 342  Q
    ||||||||    
T  45829094 ctgatttg 45829101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 235 - 341
Target Start/End: Original strand, 9380307 - 9380413
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||||| ||||| || ||||  |||||||||||||||||||||| ||||||  |||||||||||||||||||| ||| ||  ||||||||||||    
T  9380307 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgccccccatagttttaaacgagcgattttgccccctatagttttcccccttt 9380406  T
Q  335 ctgattt 341  Q
    |||||||    
T  9380407 ctgattt 9380413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 235 - 341
Target Start/End: Complemental strand, 9380795 - 9380689
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||||| ||||| || ||||  |||||||||||||||||||||||| ||||  |||||||||||||||||||| ||| ||  ||||||||||||    
T  9380795 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcactccatagttttaaacgagcgattttgccccctatagttttcccccttt 9380696  T
Q  335 ctgattt 341  Q
    |||||||    
T  9380695 ctgattt 9380689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 235 - 341
Target Start/End: Complemental strand, 26207800 - 26207694
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||||||||||| || ||||  |||||||||||||||||||||||||||||  ||| |||||||||||||||| ||| ||  |||||| |||||    
T  26207800 ggcttaattgcatttttcccccctatagtttgccaattgtgcgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcctccttt 26207701  T
Q  335 ctgattt 341  Q
    |||||||    
T  26207700 ctgattt 26207694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 235 - 341
Target Start/End: Complemental strand, 39744519 - 39744413
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||||| ||||| || ||||  |||| ||||||||||||||||||||||||  |||||||||||||||||||| ||| ||  ||||||||||||    
T  39744519 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 39744420  T
Q  335 ctgattt 341  Q
    |||||||    
T  39744419 ctgattt 39744413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 234 - 341
Target Start/End: Complemental strand, 23540307 - 23540200
Alignment:
Q  234 tggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctt 333  Q
    ||||||||||||| |||||||| ||||  |||| ||||||||||||||||||||| ||  |||||||||||||||||| | ||| ||  |||||||||||    
T  23540307 tggcttaattgcacttttcacccctatagtttgtcaattgtgcgattttgcaccctatagttttaaacgagcgattttaccccctatagttttccccctt 23540208  T
Q  334 tctgattt 341  Q
    ||||||||    
T  23540207 tctgattt 23540200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 230 - 341
Target Start/End: Complemental strand, 43292416 - 43292306
Alignment:
Q  230 aagttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccc 329  Q
    ||||||||||||||||||||||| || || |  ||||||||||||||||||||||| |||||  |||||||||||||||||||| ||| ||  |||| ||    
T  43292416 aagttggcttaattgcatttttcccccctttagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagtttt-cc 43292318  T
Q  330 cctttctgattt 341  Q
    ||||||||||||    
T  43292317 cctttctgattt 43292306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 235 - 341
Target Start/End: Original strand, 9023244 - 9023350
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||||| ||||| || ||||  |||||||||||||||||||||||||||||  ||||||||||| |||||||| ||| ||  ||||||||||||    
T  9023244 ggcttaattgcacttttctcccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagtgattttgccccctatagttttcccccttt 9023343  T
Q  335 ctgattt 341  Q
     ||||||    
T  9023344 atgattt 9023350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 235 - 341
Target Start/End: Complemental strand, 9023734 - 9023628
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||||| ||||| || ||||  |||| ||||||||||||||||||||||||  ||||||| |||||||||||| ||| ||  ||||||||||||    
T  9023734 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaatgagcgattttgccccctatagttttcccccttt 9023635  T
Q  335 ctgattt 341  Q
    |||||||    
T  9023634 ctgattt 9023628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 236 - 334
Target Start/End: Original strand, 11529169 - 11529267
Alignment:
Q  236 gcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    ||||||||||| |||||  | ||| ||||||||||||||| ||||||||||||||||||||||| || ||||||||||||| |||| ||||||| ||||    
T  11529169 gcttaattgcacttttcctccctaacttttgccaattgtgtgattttgcaccccatgtttttaatcgtgcgattttgcaccacatcattttccctcttt 11529267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 235 - 341
Target Start/End: Original strand, 32703225 - 32703331
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||||| ||||| || ||||  |||||||||||||||||| |||||||| |  |||||||||||||||||||| ||| ||  ||||||||||||    
T  32703225 ggcttaattgcacttttcccccctataatttgccaattgtgcgattatgcaccccgtagttttaaacgagcgattttgccccctatagttttcccccttt 32703324  T
Q  335 ctgattt 341  Q
    |||||||    
T  32703325 ctgattt 32703331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 238 - 341
Target Start/End: Original strand, 13198606 - 13198711
Alignment:
Q  238 ttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccat-gtttttaaacgagcgattttgcaccccatcttttt-ccccctttc 335  Q
    ||||||||| ||||| ||| |||||||||||||||||||||||||||||||| |  |||||    ||||||||||||||||||||||||| |||||||||    
T  13198606 ttaattgcacttttctcctttatcttttgccaattgtgcgattttgcaccccctcttttttttttgagcgattttgcaccccatctttttgccccctttc 13198705  T
Q  336 tgattt 341  Q
    ||||||    
T  13198706 tgattt 13198711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 235 - 341
Target Start/End: Original strand, 169013 - 169120
Alignment:
Q  235 ggcttaattgcatttttcacctc-tatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctt 333  Q
    |||||||||||| ||||| || | |||  |||||||||||||||||||||||||||||  |||||||||||||||||||| ||| ||  |||| ||||||    
T  169013 ggcttaattgcacttttctccccctatagtttgccaattgtgcgattttgcaccccataattttaaacgagcgattttgccccctatagtttttcccctt 169112  T
Q  334 tctgattt 341  Q
    ||||||||    
T  169113 tctgattt 169120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 235 - 341
Target Start/End: Complemental strand, 3930533 - 3930427
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatcttttt-ccccctt 333  Q
    |||||||||||| ||||| || ||||||||||| ||||||||||||||||||||| | |||||     |||||||||||||||||||||||| |||||||    
T  3930533 ggcttaattgcacttttcccc-ctatcttttgctaattgtgcgattttgcaccccctcttttttttttagcgattttgcaccccatctttttgccccctt 3930435  T
Q  334 tctgattt 341  Q
    ||||||||    
T  3930434 tctgattt 3930427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 234 - 341
Target Start/End: Complemental strand, 39086678 - 39086571
Alignment:
Q  234 tggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctt 333  Q
    ||||||||||||| ||||| ||  |||  |||||||||||||||||||||||||  ||  |||||||||||||||||||| ||| ||  |||||||||||    
T  39086678 tggcttaattgcacttttctcccatatagtttgccaattgtgcgattttgcacctaatagttttaaacgagcgattttgccccctatagttttccccctt 39086579  T
Q  334 tctgattt 341  Q
    ||||||||    
T  39086578 tctgattt 39086571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 235 - 341
Target Start/End: Complemental strand, 293271 - 293165
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||||| ||||  || ||||  |||| ||||||||||||||||||||||||  |||||||||||||||||||| ||  ||  ||||||||||||    
T  293271 ggcttaattgcactttttccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccgtatagttttcccccttt 293172  T
Q  335 ctgattt 341  Q
    |||||||    
T  293171 ctgattt 293165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 235 - 341
Target Start/End: Original strand, 39744030 - 39744136
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||||| ||||  || ||||  ||| |||||||||||||||| ||||||||  |||||||||||||||||||| ||| ||  ||||||||||||    
T  39744030 ggcttaattgcactttttccccctatagtttaccaattgtgcgattttccaccccataattttaaacgagcgattttgccccctatagttttcccccttt 39744129  T
Q  335 ctgattt 341  Q
    |||||||    
T  39744130 ctgattt 39744136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 236 - 341
Target Start/End: Original strand, 43292038 - 43292143
Alignment:
Q  236 gcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttc 335  Q
    ||||||||||| ||||  || ||||  |||| ||||||||||||||||||||||||  |||||||||||||||||||| ||| ||  |||| ||||||||    
T  43292038 gcttaattgcacttttttcccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagtttttcccctttc 43292137  T
Q  336 tgattt 341  Q
    ||||||    
T  43292138 tgattt 43292143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 235 - 338
Target Start/End: Original strand, 48405962 - 48406064
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||||| ||||| || ||||  |||||||||| ||| ||||||||||||||  |||||||||||||||||||| ||| ||  ||||||||||||    
T  48405962 ggcttaattgcacttttcccc-ctatagtttgccaattatgcaattttgcaccccatagttttaaacgagcgattttgccccctataattttcccccttt 48406060  T
Q  335 ctga 338  Q
    ||||    
T  48406061 ctga 48406064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 235 - 341
Target Start/End: Original strand, 292782 - 292888
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||||| ||||| || ||||  |||||||||||||| |||||||| | |||  |||||||||||||||||||| ||| |   ||||||||||||    
T  292782 ggcttaattgcacttttcccccctatagtttgccaattgtgcaattttgcatctcatagttttaaacgagcgattttgccccctacagttttcccccttt 292881  T
Q  335 ctgattt 341  Q
    |||||||    
T  292882 ctgattt 292888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 263 - 341
Target Start/End: Original strand, 23539867 - 23539945
Alignment:
Q  263 tttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctgattt 341  Q
    |||||||||||||||||||||||||||||  ||| |||||| ||||||||| ||| || ||||||| ||||||||||||    
T  23539867 tttgccaattgtgcgattttgcaccccatagtttaaaacgaacgattttgccccctatatttttcctcctttctgattt 23539945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 263 - 341
Target Start/End: Original strand, 26207388 - 26207466
Alignment:
Q  263 tttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctgattt 341  Q
    |||||||||||||||||||||||||||||  ||| |||||||||||||||| ||| ||  |||||| ||||||||||||    
T  26207388 tttgccaattgtgcgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcctcctttctgattt 26207466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 235 - 325
Target Start/End: Complemental strand, 35393829 - 35393741
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttt 325  Q
    |||||||||||| |||||||| ||||||||||| |||||||||| |||||||||| | |||||  | ||||||||||||||||||||||||    
T  35393829 ggcttaattgcacttttcacc-ctatcttttgctaattgtgcgaatttgcaccccctcttttt-tatgagcgattttgcaccccatctttt 35393741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 263 - 341
Target Start/End: Complemental strand, 44468949 - 44468871
Alignment:
Q  263 tttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctgattt 341  Q
    ||||||||||||||||||||||||| |||  |||||||||||||||||||| ||| ||  |||||| ||||||||||||    
T  44468949 tttgccaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccctatagttttcctcctttctgattt 44468871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 263 - 341
Target Start/End: Complemental strand, 48406411 - 48406333
Alignment:
Q  263 tttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctgattt 341  Q
    |||||||||||||||||||||||||| ||  |||||||||||||||||||| ||| ||  |||| ||||||||||||||    
T  48406411 tttgccaattgtgcgattttgcaccctatagttttaaacgagcgattttgccccctatagtttttcccctttctgattt 48406333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 235 - 324
Target Start/End: Complemental strand, 18077256 - 18077167
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatcttt 324  Q
    |||||||||||| |||||||| |||| |||||| ||||||||||||||||||||| | |||||    ||||||||||||| |||||||||    
T  18077256 ggcttaattgcacttttcacccctattttttgctaattgtgcgattttgcaccccctcttttttgttgagcgattttgcatcccatcttt 18077167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 257 - 341
Target Start/End: Complemental strand, 25162345 - 25162261
Alignment:
Q  257 ctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctgattt 341  Q
    |||| ||||| |||||||| |||||||||| ||||  |||||||||||||||||||| ||| ||  |||||||||||||||||||    
T  25162345 ctatattttgtcaattgtgtgattttgcactccatagttttaaacgagcgattttgccccctatagttttccccctttctgattt 25162261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 239 - 325
Target Start/End: Complemental strand, 49178866 - 49178779
Alignment:
Q  239 taattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccat-gtttttaaacgagcgattttgcaccccatctttt 325  Q
    |||||||| ||||| || ||||||||||||||||||||||||||||||||| |  |||||    ||||||||||||||||||||||||    
T  49178866 taattgcacttttctcccctatcttttgccaattgtgcgattttgcaccccctctttttttttggagcgattttgcaccccatctttt 49178779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 257 - 325
Target Start/End: Original strand, 39415246 - 39415314
Alignment:
Q  257 ctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttt 325  Q
    ||||||||||| ||||||||||||||||||||  | ||||||   ||||||||||||||||||||||||    
T  39415246 ctatcttttgctaattgtgcgattttgcaccctctctttttatttgagcgattttgcaccccatctttt 39415314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 256 - 334
Target Start/End: Complemental strand, 11530231 - 11530154
Alignment:
Q  256 tctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    ||||| |||| ||||||||||||||||| |||| || ||||||| || |||||||||||||| ||| ||||||||||||    
T  11530231 tctattttttaccaattgtgcgattttgaaccc-atatttttaatcgtgcgattttgcacccaatccttttcccccttt 11530154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 235 - 325
Target Start/End: Complemental strand, 13198960 - 13198870
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttt 325  Q
    |||||||||||| ||||| || ||||||||||  ||||||||||||||||||||| | ||||     |||||||||||||||| |||||||    
T  13198960 ggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccctcttttgttttgagcgattttgcaccctatctttt 13198870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 236 - 325
Target Start/End: Complemental strand, 8488534 - 8488447
Alignment:
Q  236 gcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttt 325  Q
    ||||||||||| ||||| ||| |||||||| | ||||||||||||||||||||| | |||||    ||||||||||||||||||||||||    
T  8488534 gcttaattgcacttttcgcct-tatctttttctaattgtgcgattttgcaccccctcttttt-tttgagcgattttgcaccccatctttt 8488447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 296
Target Start/End: Complemental strand, 24775837 - 24775776
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttt 296  Q
    |||||||||||| ||||| |  |||||||||| |||||||||||||||||||||||| ||||    
T  24775837 ggcttaattgcacttttccctcctatcttttgtcaattgtgcgattttgcaccccatctttt 24775776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 297
Target Start/End: Complemental strand, 11241714 - 11241653
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgttttt 297  Q
    |||||||||| | ||||| || ||||||||||||||||||| ||||||||||||||| |||||    
T  11241714 ggcttaattgtacttttcccc-ctatcttttgccaattgtgggattttgcaccccatcttttt 11241653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 263 - 341
Target Start/End: Complemental strand, 12758230 - 12758152
Alignment:
Q  263 tttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctgattt 341  Q
    |||||||||| || | |||||||| ||||  |||||||||||| ||||||| ||| ||  |||||||||||||||||||    
T  12758230 tttgccaattatgtgtttttgcacgccatagttttaaacgagcaattttgccccctatagttttccccctttctgattt 12758152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 331
Target Start/End: Complemental strand, 39415578 - 39415485
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccc 331  Q
    ||||||| |||| ||||  |||||||||||||| |||||||| |||||||| ||| | |||||    |||||||||||||| |||||||||| ||||    
T  39415578 ggcttaactgcactttttccctctatcttttgctaattgtgcaattttgcatccctttttttt---tgagcgattttgcactccatctttttgcccc 39415485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 335
Target Start/End: Original strand, 23432504 - 23432577
Alignment:
Q  262 ttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttc 335  Q
    ||||| ||||||||| ||| |||||||||| |||||||| || | |||||||||||  |||||| |||||||||    
T  23432504 ttttgtcaattgtgcaattctgcaccccatctttttaaatgaacaattttgcaccctctcttttgccccctttc 23432577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 342
Target Start/End: Complemental strand, 23433516 - 23433433
Alignment:
Q  258 tatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctgatttg 342  Q
    ||||||||| ||||||||||||| |||| ||  | |||||||  ||||||||||||||||  | ||||| |||||||||||||||    
T  23433516 tatcttttgtcaattgtgcgattgtgcatcctttctttttaagtgagcgattttgcaccctct-tttttgcccctttctgatttg 23433433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 235 - 289
Target Start/End: Complemental strand, 8182227 - 8182172
Alignment:
Q  235 ggcttaattgcatttttcacctctatctttt-gccaattgtgcgattttgcacccc 289  Q
    |||||||||||| |||||||| |||| |||| || |||||||||||||||||||||    
T  8182227 ggcttaattgcacttttcacccctatttttttgctaattgtgcgattttgcacccc 8182172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 236 - 341
Target Start/End: Original strand, 22681576 - 22681686
Alignment:
Q  236 gcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcacccc--atgtttttaaa----cgagcgattttgcaccccatctttttccc 329  Q
    ||||||||||| ||| | || |||||||||| ||||||||||||||||||||||   ||||||| ||      || ||||||||||||||||||||| ||    
T  22681576 gcttaattgcactttccccc-ctatcttttgtcaattgtgcgattttgcaccccctctgttttttaattttttagtgattttgcaccccatctttttgcc 22681674  T
Q  330 cctttctgattt 341  Q
    ||||||| ||||    
T  22681675 cctttctaattt 22681686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 257 - 288
Target Start/End: Complemental strand, 25225430 - 25225399
Alignment:
Q  257 ctatcttttgccaattgtgcgattttgcaccc 288  Q
    ||||||||||||||||||||||||||||||||    
T  25225430 ctatcttttgccaattgtgcgattttgcaccc 25225399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 289
Target Start/End: Original strand, 8181992 - 8182046
Alignment:
Q  236 gcttaattgcatttttcacctctatc-ttttgccaattgtgcgattttgcacccc 289  Q
    ||||||||||| ||||  || ||||| ||||||||||||||||||||||||||||    
T  8181992 gcttaattgcacttttgccccctatcgttttgccaattgtgcgattttgcacccc 8182046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 341
Target Start/End: Original strand, 12757794 - 12757872
Alignment:
Q  263 tttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctgattt 341  Q
    |||| |||||||||||||||||| | |||  |||||||||||||||||||  ||| ||  |||| || |||||||||||    
T  12757794 tttgtcaattgtgcgattttgcatctcatagttttaaacgagcgattttgtcccctatagtttttcctctttctgattt 12757872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 289
Target Start/End: Original strand, 16555515 - 16555569
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcacccc 289  Q
    |||||||||||| ||||| ||  |||||||||  |||||||||||||||||||||    
T  16555515 ggcttaattgcacttttcccccttatcttttgttaattgtgcgattttgcacccc 16555569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 313
Target Start/End: Complemental strand, 39912508 - 39912463
Alignment:
Q  268 caattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 313  Q
    |||||||||||||||||| |||||  ||||||||||| ||||||||    
T  39912508 caattgtgcgattttgcatcccatagttttaaacgagtgattttgc 39912463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 325
Target Start/End: Original strand, 3930177 - 3930268
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttt 325  Q
    |||||||||||||| ||||  || |||||||||   |||| |||||||||||||||| | |||||    |||||||||||||||| |||||||    
T  3930177 ttggcttaattgcactttttccc-ctatcttttattaattatgcgattttgcaccccctctttttttttgagcgattttgcaccctatctttt 3930268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 341
Target Start/End: Complemental strand, 11241673 - 11241637
Alignment:
Q  306 gattttgcaccccatcttttt-ccccctttctgattt 341  Q
    ||||||||||||||||||||| |||||||||||||||    
T  11241673 gattttgcaccccatctttttgccccctttctgattt 11241637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 109; Significance: 1e-54; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 235 - 373
Target Start/End: Complemental strand, 6849 - 6712
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6849 ggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 6750  T
Q  335 ctgatttggaggnnnnnnnatgtgttttagtgatgatgt 373  Q
    ||||||||||||       ||||||||||||||||||||    
T  6749 ctgatttggagg-ccccccatgtgttttagtgatgatgt 6712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 232 - 373
Target Start/End: Original strand, 6149 - 6288
Alignment:
Q  232 gttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccc 331  Q
    ||||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||    
T  6149 gttggcttaattgcacttttcacctctatcttttgctaattgtgcgattttacaccccatatttttaaatgagcgattttgcaccccatctttttccccc 6248  T
Q  332 tttctgatttggaggnnnnnnnatgtgttttagtgatgatgt 373  Q
    |||||||||||||||       ||||||||||||||||||||    
T  6249 tttctgatttggagg--cccccatgtgttttagtgatgatgt 6288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 107; Significance: 1e-53; HSPs: 56)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 233 - 373
Target Start/End: Complemental strand, 39724104 - 39723965
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccct 332  Q
    |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39724104 ttggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccct 39724005  T
Q  333 ttctgatttggaggnnnnnnnatgtgttttagtgatgatgt 373  Q
    ||||||||||||||       ||||||||||||||||||||    
T  39724004 ttctgatttggagg-ccctccatgtgttttagtgatgatgt 39723965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 235 - 346
Target Start/End: Complemental strand, 9823415 - 9823304
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9823415 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 9823316  T
Q  335 ctgatttggagg 346  Q
    ||||||||||||    
T  9823315 ctgatttggagg 9823304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 233 - 346
Target Start/End: Complemental strand, 13027337 - 13027224
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccct 332  Q
    |||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13027337 ttggtttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccct 13027238  T
Q  333 ttctgatttggagg 346  Q
    ||||||||||||||    
T  13027237 ttctgatttggagg 13027224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 235 - 373
Target Start/End: Original strand, 13026635 - 13026772
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  13026635 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacctcatgtttttaaacgagcgattttgcaccccatctttttcccccttt 13026734  T
Q  335 ctgatttggaggnnnnnnnatgtgttttagtgatgatgt 373  Q
    ||||||||||||       ||||||||||||||||||||    
T  13026735 ctgatttggagg-ccccccatgtgttttagtgatgatgt 13026772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 233 - 373
Target Start/End: Original strand, 22851388 - 22851527
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccct 332  Q
    |||||||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  22851388 ttggcttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatgtttttaaacaagcgattttgcaccccatctttttccccct 22851487  T
Q  333 ttctgatttggaggnnnnnnnatgtgttttagtgatgatgt 373  Q
    ||||||||||||||       ||||||||||||||||||||    
T  22851488 ttctgatttggagg-ccctccatgtgttttagtgatgatgt 22851527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 234 - 373
Target Start/End: Original strand, 39723400 - 39723539
Alignment:
Q  234 tggcttaattgca-tttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccct 332  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  39723400 tggcttaattgtaatttttcacctctatcttttgccaattgtgcgattttgcatcccatgtttttaaacgagcgattttgcaccccatctttttccccct 39723499  T
Q  333 ttctgatttggaggnnnnnnnatgtgttttagtgatgatgt 373  Q
    ||||||||||||||       ||||||||||||||||||||    
T  39723500 ttctgatttggagg-ccccccatgtgttttagtgatgatgt 39723539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 233 - 373
Target Start/End: Original strand, 3307336 - 3307475
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccct 332  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||| ||||    
T  3307336 ttggcttaattgcatttttcacccctatcttttgtcaattgtgcgattttgcatcccatatttttaaacaagcgattttgcaccccatctttttctccct 3307435  T
Q  333 ttctgatttggaggnnnnnnnatgtgttttagtgatgatgt 373  Q
    ||||||||||||||       ||||||||||||||||||||    
T  3307436 ttctgatttggagg-ccccctatgtgttttagtgatgatgt 3307475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 233 - 346
Target Start/End: Original strand, 9822746 - 9822859
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccct 332  Q
    |||||||||||||| |||||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  9822746 ttggcttaattgcacttttcacccctatcttttatcaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccatatctttttccccct 9822845  T
Q  333 ttctgatttggagg 346  Q
    ||||||||||||||    
T  9822846 ttctgatttggagg 9822859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 235 - 342
Target Start/End: Original strand, 13936723 - 13936828
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||||| ||||| || ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  13936723 ggcttaattgcacttttcccc-ctatcttttaccaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatcttttt-ccccttt 13936820  T
Q  335 ctgatttg 342  Q
    ||||||||    
T  13936821 ctgatttg 13936828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 232 - 341
Target Start/End: Complemental strand, 41662460 - 41662350
Alignment:
Q  232 gttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatcttttt-cccc 330  Q
    ||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||| | ||||| |  ||||||||||||||||||||||||| ||||    
T  41662460 gttggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctcttttttattgagcgattttgcaccccatctttttgcccc 41662361  T
Q  331 ctttctgattt 341  Q
    |||||||||||    
T  41662360 ctttctgattt 41662350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 235 - 373
Target Start/End: Complemental strand, 13937443 - 13937307
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||||| ||||| || |||| ||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||    
T  13937443 ggcttaattgcacttttcccccctattttttgtcaattgtgcgaatttgcaccccatgtttttaaacgagtgattttgcacctcatccttttcccccttt 13937344  T
Q  335 ctgatttggaggnnnnnnnatgtgttttagtgatgatgt 373  Q
    ||| |||| |||       ||||||||||||||||||||    
T  13937343 ctggtttgaagg--cccccatgtgttttagtgatgatgt 13937307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 237 - 341
Target Start/End: Original strand, 15442765 - 15442869
Alignment:
Q  237 cttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttct 336  Q
    |||||||||||||||| || |||| ||| |||||||||| |||||||||||||||||||||||||| |||||||||||||| ||| ||||||| |||| |    
T  15442765 cttaattgcatttttcccccctatatttcgccaattgtgtgattttgcaccccatgtttttaaacgtgcgattttgcaccctatccttttcccgctttgt 15442864  T
Q  337 gattt 341  Q
    |||||    
T  15442865 gattt 15442869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 235 - 341
Target Start/End: Complemental strand, 24473822 - 24473716
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||||| |||||| | ||||  |||||||||||||||||||||||||||||  |||||||||||||||||||  ||| ||  ||||||||||||    
T  24473822 ggcttaattgcacttttcatccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgtcccctatagttttcccccttt 24473723  T
Q  335 ctgattt 341  Q
    |||||||    
T  24473722 ctgattt 24473716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 235 - 341
Target Start/End: Original strand, 37396708 - 37396814
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||||| ||||| || ||||  |||||| ||||||||||||||||||||||  |||||||||||||||||||| ||| ||  ||||||||||||    
T  37396708 ggcttaattgcacttttcccccctatagtttgccgattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 37396807  T
Q  335 ctgattt 341  Q
    |||||||    
T  37396808 ctgattt 37396814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 237 - 341
Target Start/End: Original strand, 765736 - 765841
Alignment:
Q  237 cttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatcttttt-ccccctttc 335  Q
    |||||||||| ||||| || ||||||||||||||||||||||||||||||||| | |||||    ||||||||||||||||||||||||| |||||||||    
T  765736 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgccccctttc 765835  T
Q  336 tgattt 341  Q
     |||||    
T  765836 agattt 765841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 233 - 341
Target Start/End: Complemental strand, 15156241 - 15156132
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatcttttt-ccccc 331  Q
    |||||||||||||| ||||| || |||||||||| |||||||||||||||||||||| | |||||     |||||||||||||||||||||||| |||||    
T  15156241 ttggcttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcaccccctcttttttttttagcgattttgcaccccatctttttgccccc 15156142  T
Q  332 tttctgattt 341  Q
    ||||||||||    
T  15156141 tttctgattt 15156132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 233 - 341
Target Start/End: Original strand, 43245869 - 43245978
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatcttttt-ccccc 331  Q
    |||||||||||||| ||||  || ||||||||||  ||||||||||||||||||||| | ||||| |  ||||||||||||||||||||||||| |||||    
T  43245869 ttggcttaattgcactttttccccctatcttttgataattgtgcgattttgcaccccctcttttttattgagcgattttgcaccccatctttttgccccc 43245968  T
Q  332 tttctgattt 341  Q
    ||||||||||    
T  43245969 tttctgattt 43245978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 235 - 341
Target Start/End: Original strand, 6092777 - 6092881
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||||||||| | |||  |||||||| |||||||||||||||||| ||||| |||||||  || |||||||||||||||||||||||||| |||    
T  6092777 ggcttaattgcattttccccct--atcttttgtcaattgtgcgattttgcatcccatatttttaattgaacgattttgcaccccatctttttcccctttt 6092874  T
Q  335 ctgattt 341  Q
    | |||||    
T  6092875 cagattt 6092881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 235 - 341
Target Start/End: Original strand, 12281124 - 12281231
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatcttttt-ccccctt 333  Q
    |||||||||||| ||||| || ||||||||||||||||||||||||||||||| | | |||||    ||||||||||||||||||||||||| |||||||    
T  12281124 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacctcctctttttttttgagcgattttgcaccccatctttttgccccctt 12281223  T
Q  334 tctgattt 341  Q
    || |||||    
T  12281224 tcagattt 12281231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 258 - 341
Target Start/End: Original strand, 15042168 - 15042251
Alignment:
Q  258 tatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctgattt 341  Q
    |||||||||||||||||| |||||||||||| ||  ||||||| |||||||||||||| ||||| |||||||||||||||||||    
T  15042168 tatcttttgccaattgtgtgattttgcaccctattgttttaaatgagcgattttgcacgccatcattttccccctttctgattt 15042251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 235 - 341
Target Start/End: Complemental strand, 6199150 - 6199044
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||||| |||||  | ||||  ||||||||||||||||||||||| |||||  |||||||||||||||||||| ||| ||  ||||||||||||    
T  6199150 ggcttaattgcacttttcttccctatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccccttt 6199051  T
Q  335 ctgattt 341  Q
    |||||||    
T  6199050 ctgattt 6199044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 235 - 341
Target Start/End: Complemental strand, 20861692 - 20861586
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||||||||||  || ||||  | |||||||||||||||||||||||||||  ||||||||||||||||||||  || ||  ||||||||||||    
T  20861692 ggcttaattgcattttttccccctatagtctgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgcctcctataattttcccccttt 20861593  T
Q  335 ctgattt 341  Q
    |||||||    
T  20861592 ctgattt 20861586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 233 - 341
Target Start/End: Complemental strand, 37397201 - 37397093
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccct 332  Q
    |||||||||||||| ||||| || ||||  |||||||||||||||||||||| ||||||  |||||||||||||| ||||| ||| ||   |||||||||    
T  37397201 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgccccccatagttttaaacgagcgactttgccccctatagatttccccct 37397102  T
Q  333 ttctgattt 341  Q
    |||||||||    
T  37397101 ttctgattt 37397093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 235 - 341
Target Start/End: Complemental strand, 34498609 - 34498503
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||||| ||||| || ||||  ||||| |||||||||||||||||||||||  |||||||| || |||| ||| ||| || |||||||||||||    
T  34498609 ggcttaattgcacttttcccccctatagtttgcaaattgtgcgattttgcaccccatagttttaaacaagagattatgccccctatatttttcccccttt 34498510  T
Q  335 ctgattt 341  Q
    |||||||    
T  34498509 ctgattt 34498503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 233 - 341
Target Start/End: Original strand, 24473341 - 24473449
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccct 332  Q
    |||||||||||||| ||||  || ||||  ||||||||||||| |||||||||||||||  ||||||| |||||||||||| ||| ||  ||| ||||||    
T  24473341 ttggcttaattgcactttttccccctatagtttgccaattgtgtgattttgcaccccataattttaaatgagcgattttgccccctatagtttcccccct 24473440  T
Q  333 ttctgattt 341  Q
    |||||||||    
T  24473441 ttctgattt 24473449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 233 - 341
Target Start/End: Original strand, 34498120 - 34498227
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccct 332  Q
    |||| ||||||||| ||||  || ||||  |||| ||||||||||||||||||||||||  |||||||||||||||||||||||| ||   |||||||||    
T  34498120 ttggtttaattgcactttttccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgcaccctat-agtttccccct 34498218  T
Q  333 ttctgattt 341  Q
    |||||||||    
T  34498219 ttctgattt 34498227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 235 - 341
Target Start/End: Original strand, 17431287 - 17431393
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||||| ||||| ||  |||  |||| ||||||||||||||| |||| |||  |||||||||||||||||||| ||| ||  ||||||||||||    
T  17431287 ggcttaattgcacttttcccccatatagtttgtcaattgtgcgatttttcacctcatagttttaaacgagcgattttgccccctatagttttcccccttt 17431386  T
Q  335 ctgattt 341  Q
    |||||||    
T  17431387 ctgattt 17431393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 233 - 326
Target Start/End: Original strand, 37752082 - 37752176
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccat-gtttttaaacgagcgattttgcaccccatcttttt 326  Q
    |||||||||||||| ||||| || |||| |||||| |||||||||||||||||||||||  |||||    |||||||||||||||||||||||||    
T  37752082 ttggcttaattgcacttttcccccctatgttttgctaattgtgcgattttgcaccccatcttttttttttgagcgattttgcaccccatcttttt 37752176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 235 - 341
Target Start/End: Original strand, 41662521 - 41662627
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||||| ||||| ||  |||  ||||||||||||||||||||||||| |||  |||||||||||||||||||| ||| ||  ||||| ||||||    
T  41662521 ggcttaattgcacttttcccccatatagtttgccaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccctatagttttctcccttt 41662620  T
Q  335 ctgattt 341  Q
    || ||||    
T  41662621 ctaattt 41662627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 233 - 341
Target Start/End: Original strand, 9623500 - 9623608
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccct 332  Q
    |||||||||||||| ||||   | ||||  |||||||||||||||||||||||||||||  |||||||||||| ||||||| ||| ||  |||||||  |    
T  9623500 ttggcttaattgcactttttctcactatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcaattttgccccctatagttttcccttt 9623599  T
Q  333 ttctgattt 341  Q
    |||||||||    
T  9623600 ttctgattt 9623608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 237 - 341
Target Start/End: Original strand, 15444213 - 15444317
Alignment:
Q  237 cttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttct 336  Q
    |||||||||||||||| |||||||  |||||||||||| | ||||| ||  ||||  |||||||||||||||||||| ||| ||  |||||||||||| |    
T  15444213 cttaattgcatttttcccctctatagtttgccaattgtacaattttacattccatagttttaaacgagcgattttgctccctatagttttccccctttat 15444312  T
Q  337 gattt 341  Q
    |||||    
T  15444313 gattt 15444317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 233 - 325
Target Start/End: Complemental strand, 16929298 - 16929207
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttt 325  Q
    |||||||||||||| ||||| || ||||||||||| ||||||||||||||||||||| | |||||    || |||||||||||||||||||||    
T  16929298 ttggcttaattgcacttttctcccctatcttttgctaattgtgcgattttgcaccccctcttttt-tttgaacgattttgcaccccatctttt 16929207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 235 - 341
Target Start/End: Original strand, 16928942 - 16929047
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatcttttt-ccccctt 333  Q
    |||||||||||| ||| | || ||||||||||| ||||||||||||||||||||| | |||||    ||||| ||||||||||||||||||| |||||||    
T  16928942 ggcttaattgcactttccccccctatcttttgctaattgtgcgattttgcaccccctcttttt-tttgagcg-ttttgcaccccatctttttgccccctt 16929039  T
Q  334 tctgattt 341  Q
    ||||||||    
T  16929040 tctgattt 16929047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 238 - 341
Target Start/End: Complemental strand, 33727156 - 33727053
Alignment:
Q  238 ttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctg 337  Q
    |||||| || ||||| ||| |||  ||||| ||||||||||||||||||  |||  |||||||||||||||||||| ||| ||  |||||||||||||||    
T  33727156 ttaattacacttttctcctttatagtttgctaattgtgcgattttgcacttcatagttttaaacgagcgattttgccccctatagttttccccctttctg 33727057  T
Q  338 attt 341  Q
    ||||    
T  33727056 attt 33727053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 256 - 341
Target Start/End: Complemental strand, 75017 - 74932
Alignment:
Q  256 tctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatcttttt-ccccctttctgattt 341  Q
    |||||||||||| ||||||||||||||||||||| | |||||     |||||||||||||||||||||||| |||||||||||||||    
T  75017 tctatcttttgctaattgtgcgattttgcaccccctcttttttttt-agcgattttgcaccccatctttttgccccctttctgattt 74932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 267 - 341
Target Start/End: Original strand, 6198690 - 6198764
Alignment:
Q  267 ccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctgattt 341  Q
    |||||||||||||||||||||| ||  |||||||||||||||||||| ||| ||  |||||||| ||||||||||    
T  6198690 ccaattgtgcgattttgcaccctatagttttaaacgagcgattttgccccctatagttttccccatttctgattt 6198764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 235 - 325
Target Start/End: Original strand, 15155883 - 15155973
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttt 325  Q
    |||||||||||| ||||| || ||||||||||  ||||||||||||||||||||| | |||||    |||||||||||||||| |||||||    
T  15155883 ggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccctatctttt 15155973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 233 - 341
Target Start/End: Original strand, 16169172 - 16169279
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccct 332  Q
    |||||||||||||| |||||| | ||||  |||||||||||||| |||||||||| |||  |||||||||||| ||||| | ||| ||  ||||| ||||    
T  16169172 ttggcttaattgcacttttcatc-ctatagtttgccaattgtgcaattttgcacctcatagttttaaacgagcaatttttccccctatagttttctccct 16169270  T
Q  333 ttctgattt 341  Q
    |||||||||    
T  16169271 ttctgattt 16169279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 233 - 325
Target Start/End: Complemental strand, 37752472 - 37752381
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttt 325  Q
    |||||||||||||| ||||| || ||||||||||  ||||||||||||||||||||| | |||||    ||||||||||||||||||| ||||    
T  37752472 ttggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccctcttttt-tttgagcgattttgcaccccatatttt 37752381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 238 - 341
Target Start/End: Complemental strand, 15444698 - 15444595
Alignment:
Q  238 ttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctg 337  Q
    ||||||||| ||||  || ||||  ||| |||||||||||||||||||||||||  ||||||||||||||||||   ||| ||  ||||||| |||||||    
T  15444698 ttaattgcactttttccccctataatttaccaattgtgcgattttgcaccccatagttttaaacgagcgattttatcccctatagttttccctctttctg 15444599  T
Q  338 attt 341  Q
    ||||    
T  15444598 attt 15444595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 236 - 287
Target Start/End: Complemental strand, 22852009 - 22851958
Alignment:
Q  236 gcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcacc 287  Q
    ||||||||| |||||||| | |||||||||||||||||||||||||||||||    
T  22852009 gcttaattgtatttttcatccctatcttttgccaattgtgcgattttgcacc 22851958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 275 - 341
Target Start/End: Original strand, 37752154 - 37752221
Alignment:
Q  275 gcgattttgcaccccatgtttttaaacgagcgattttgcaccccatcttttt-ccccctttctgattt 341  Q
    ||||||||||||||||| |||||    ||||||||||||||||||||||||| |||||||||||||||    
T  37752154 gcgattttgcaccccatctttttttttgagcgattttgcaccccatctttttgccccctttctgattt 37752221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 235 - 325
Target Start/End: Complemental strand, 43246230 - 43246139
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccat-gtttttaaacgagcgattttgcaccccatctttt 325  Q
    |||||||||||| ||||| || ||||||||||| ||||||| ||||||||||||| |  |||||    ||||||||||||||||||||||||    
T  43246230 ggcttaattgcacttttcccccctatcttttgctaattgtgtgattttgcaccccctcttttttttttgagcgattttgcaccccatctttt 43246139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 263 - 313
Target Start/End: Complemental strand, 25439152 - 25439102
Alignment:
Q  263 tttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 313  Q
    |||| ||||||||||||||||||||||||  ||||||||||||||||||||    
T  25439152 tttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgc 25439102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 233 - 325
Target Start/End: Complemental strand, 12281482 - 12281390
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttt 325  Q
    |||||||||||||| ||||| ||  |||||||||  ||||||||||||||||||||| | |||||    |||||||||| ||||| |||||||    
T  12281482 ttggcttaattgcacttttcccccttatcttttgttaattgtgcgattttgcaccccctctttttttttgagcgattttccaccctatctttt 12281390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 233 - 297
Target Start/End: Original strand, 23123336 - 23123400
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgttttt 297  Q
    |||||||||||||| ||||| |  |||||||||| ||||||||||||||| |||||||| |||||    
T  23123336 ttggcttaattgcacttttccctcctatcttttgtcaattgtgcgattttacaccccatcttttt 23123400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 304 - 373
Target Start/End: Complemental strand, 22851970 - 22851903
Alignment:
Q  304 gcgattttgcaccccatctttttccccctttctgatttggaggnnnnnnnatgtgttttagtgatgatgt 373  Q
    ||||||||||||| | |||||||||||||||||||||||||||       ||||||||||||||||||||    
T  22851970 gcgattttgcacctcgtctttttccccctttctgatttggagg--cccccatgtgttttagtgatgatgt 22851903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 263 - 341
Target Start/End: Original strand, 2856554 - 2856632
Alignment:
Q  263 tttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctgattt 341  Q
    |||||||||||||||||||||||||||||  ||| |||||  |||||||   ||| ||  |||||||||||||||||||    
T  2856554 tttgccaattgtgcgattttgcaccccatagtttaaaacgttcgattttatcccctatagttttccccctttctgattt 2856632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 331
Target Start/End: Complemental strand, 3464001 - 3463903
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccc 331  Q
    |||||||||||||| ||||| || |||| |||||| ||||||||||| ||||||||  |  |||     ||||||||||||||||||||||||| ||||    
T  3464001 ttggcttaattgcacttttcccccctatattttgctaattgtgcgatcttgcaccctctcctttgttttgagcgattttgcaccccatctttttacccc 3463903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 237 - 291
Target Start/End: Original strand, 25438794 - 25438848
Alignment:
Q  237 cttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccat 291  Q
    |||||||||| ||||| || ||||  |||||||||||||||||||||||||||||    
T  25438794 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccat 25438848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 237 - 325
Target Start/End: Original strand, 74688 - 74773
Alignment:
Q  237 cttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttt 325  Q
    |||||||||| ||||| |||| ||||||||| ||||||||||||||||||||| | |||||     |||||||||||||| ||||||||    
T  74688 cttaattgcacttttc-cctccatcttttgctaattgtgcgattttgcacccctttttttt--tttagcgattttgcacctcatctttt 74773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 233 - 325
Target Start/End: Original strand, 34313763 - 34313852
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttt 325  Q
    |||||||||||||| ||||| |||  ||||||||  ||||||||||||||||||||| | |||||    |||||||||||||||| |||||||    
T  34313763 ttggcttaattgcacttttcccct--atcttttgttaattgtgcgattttgcaccccctcttttt-tttgagcgattttgcaccctatctttt 34313852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 341
Target Start/End: Complemental strand, 15043815 - 15043731
Alignment:
Q  257 ctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctgattt 341  Q
    |||||||||| |||||| |||||||||  | ||||  |||||||||||||||||| |||||| |  ||||| || ||||||||||    
T  15043815 ctatcttttgacaattgcgcgattttgtgctccatagttttaaacgagcgattttacaccccgttcttttctccttttctgattt 15043731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 286
Target Start/End: Original strand, 11007561 - 11007613
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcac 286  Q
    ||||||||||| |||||||| |  ||||||||||| ||||||||||||||||||    
T  11007561 ttggcttaattacatttttc-ctgctatcttttgctaattgtgcgattttgcac 11007613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 325
Target Start/End: Complemental strand, 9465906 - 9465838
Alignment:
Q  257 ctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttt 325  Q
    ||||||||||  ||||||||||||||||||||| | |||||    |||| |||||||||||||| ||||    
T  9465906 ctatcttttgttaattgtgcgattttgcaccccctctttttttttgagcaattttgcaccccatttttt 9465838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 341
Target Start/End: Complemental strand, 16169663 - 16169555
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccct 332  Q
    |||||||||||||| |||||  | ||||  |||  ||||||||| | |||||| |  ||  |||||||||||||||||||| ||| ||  |||| |||||    
T  16169663 ttggcttaattgcacttttcctccctatagtttttcaattgtgcaaatttgcatcttatagttttaaacgagcgattttgccccctatagtttttcccct 16169564  T
Q  333 ttctgattt 341  Q
    |||||||||    
T  16169563 ttctgattt 16169555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 107; Significance: 1e-53; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 233 - 373
Target Start/End: Original strand, 44599487 - 44599626
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccct 332  Q
    |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44599487 ttggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccct 44599586  T
Q  333 ttctgatttggaggnnnnnnnatgtgttttagtgatgatgt 373  Q
    ||||||||||||||       ||||||||||||||||||||    
T  44599587 ttctgatttggagg-ccccccatgtgttttagtgatgatgt 44599626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 235 - 373
Target Start/End: Original strand, 13863313 - 13863450
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  13863313 ggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccctcttt 13863412  T
Q  335 ctgatttggaggnnnnnnnatgtgttttagtgatgatgt 373  Q
    ||||||||||||       ||||||||||||||||||||    
T  13863413 ctgatttggagg-ccccccatgtgttttagtgatgatgt 13863450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 235 - 346
Target Start/End: Complemental strand, 44600189 - 44600078
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44600189 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 44600090  T
Q  335 ctgatttggagg 346  Q
    ||||||||||||    
T  44600089 ctgatttggagg 44600078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 235 - 373
Target Start/End: Complemental strand, 13864010 - 13863875
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  13864010 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattt-gcaccccatatttttaaacgagcgattttgcaccccatctttttcccccttt 13863912  T
Q  335 ctgatttggaggnnnnnnnatgtgttttagtgatgatgt 373  Q
    ||||||||||||       ||||||||||||||||||||    
T  13863911 ctgatttggagg--ccccgatgtgttttagtgatgatgt 13863875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 235 - 342
Target Start/End: Complemental strand, 8643820 - 8643713
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||||| |||||| | ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  8643820 ggcttaattgcacttttcatccctatcttttaccaattgtgcgattttgcaccccatgttattaaacgagcgattttgcaccccatctttttcccccttt 8643721  T
Q  335 ctgatttg 342  Q
    ||||||||    
T  8643720 ctgatttg 8643713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 233 - 341
Target Start/End: Original strand, 37888831 - 37888939
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccct 332  Q
    |||||||||||||| ||||| || ||||  |||||||||||||||||||||||||||||  |||||||||||||||||||| ||| ||  ||||||||||    
T  37888831 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccct 37888930  T
Q  333 ttctgattt 341  Q
    |||||||||    
T  37888931 ttctgattt 37888939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 235 - 342
Target Start/End: Complemental strand, 46816365 - 46816258
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||||| ||||  || ||||||||| |||||| |||||||||||||||||| |||||||||||||||||||| |||||||| |||| |||||||    
T  46816365 ggcttaattgcactttttcccgctatcttttaccaattatgcgattttgcaccccatatttttaaacgagcgattttgtaccccatcatttttccccttt 46816266  T
Q  335 ctgatttg 342  Q
    ||| ||||    
T  46816265 ctggtttg 46816258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 235 - 341
Target Start/End: Original strand, 10533034 - 10533140
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||||| ||||| || ||||  |||||||||||||||||||||||||||||  |||||||||||||||||||| ||| ||  ||||||||||||    
T  10533034 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 10533133  T
Q  335 ctgattt 341  Q
    |||||||    
T  10533134 ctgattt 10533140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 233 - 341
Target Start/End: Complemental strand, 3687712 - 3687604
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatcttttt-ccccc 331  Q
    |||||||||||||| ||||| || ||||||||||||||||||||||||||||||||| | |||||    ||||||||||||||||||||||||| |||||    
T  3687712 ttggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctcttttt-tttgagcgattttgcaccccatctttttgccccc 3687614  T
Q  332 tttctgattt 341  Q
    ||||||||||    
T  3687613 tttctgattt 3687604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 233 - 341
Target Start/End: Original strand, 13741555 - 13741663
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccct 332  Q
    |||||||||||||||||||| || ||||  ||| |||||||||||||||||||||||||  |||||||||||||||||||| ||| ||  ||||||| ||    
T  13741555 ttggcttaattgcatttttcccccctatagtttaccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccact 13741654  T
Q  333 ttctgattt 341  Q
    |||||||||    
T  13741655 ttctgattt 13741663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 233 - 341
Target Start/End: Complemental strand, 29293402 - 29293294
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccct 332  Q
    |||||||||||||||||||| || ||||  |||||||||||||||||||||||| ||||  ||| |||||||||||||||| ||| ||  ||||||||||    
T  29293402 ttggcttaattgcatttttcccccctatagtttgccaattgtgcgattttgcactccattgtttaaaacgagcgattttgccccctatagttttccccct 29293303  T
Q  333 ttctgattt 341  Q
    |||||||||    
T  29293302 ttctgattt 29293294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 235 - 341
Target Start/End: Complemental strand, 9412379 - 9412272
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatcttttt-ccccctt 333  Q
    |||||||||||| ||||| || ||||||||||||||||||||||||||||||||| | |||||    ||||||||||||||||||||||||| |||||||    
T  9412379 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgccccctt 9412280  T
Q  334 tctgattt 341  Q
    || |||||    
T  9412279 tcagattt 9412272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 235 - 341
Target Start/End: Complemental strand, 20419378 - 20419272
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||||| ||||| || ||||  |||| ||||||||||||||||||||||||  |||||||||||||||||||| ||| ||  ||||||||||||    
T  20419378 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 20419279  T
Q  335 ctgattt 341  Q
    |||||||    
T  20419278 ctgattt 20419272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 235 - 341
Target Start/End: Original strand, 22740156 - 22740262
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||||| ||||| || ||||  |||| ||||||||||||||||||||||||  |||||||||||||||||||| ||| ||  ||||||||||||    
T  22740156 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 22740255  T
Q  335 ctgattt 341  Q
    |||||||    
T  22740256 ctgattt 22740262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 235 - 341
Target Start/End: Complemental strand, 37889313 - 37889207
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||||| ||||| || ||||  |||||||||||||||||||||||||||||  |||||||||||||||||||| ||| ||  ||||| ||||||    
T  37889313 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttctcccttt 37889214  T
Q  335 ctgattt 341  Q
    |||||||    
T  37889213 ctgattt 37889207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 235 - 341
Target Start/End: Complemental strand, 37972450 - 37972344
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||||| ||||| || ||||  |||||||||||||||||||||||||||||  |||||||||||||||||||| ||| ||  ||||||||||||    
T  37972450 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 37972351  T
Q  335 ctgattt 341  Q
    | |||||    
T  37972350 cagattt 37972344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 234 - 341
Target Start/End: Complemental strand, 9035348 - 9035240
Alignment:
Q  234 tggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttc-cccct 332  Q
    ||||||||||||| ||||| || ||||  |||||||||||||||||||||||||||||  |||||||||||||||||||| ||| ||  ||||| |||||    
T  9035348 tggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttctcccct 9035249  T
Q  333 ttctgattt 341  Q
    |||||||||    
T  9035248 ttctgattt 9035240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 238 - 341
Target Start/End: Original strand, 18863970 - 18864073
Alignment:
Q  238 ttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctg 337  Q
    ||||||||| ||||| || ||||  |||| ||||||||||||||||||||||||  |||||||||||||||||||| ||| ||  |||||||||||||||    
T  18863970 ttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctg 18864069  T
Q  338 attt 341  Q
    ||||    
T  18864070 attt 18864073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 238 - 341
Target Start/End: Original strand, 20418891 - 20418994
Alignment:
Q  238 ttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctg 337  Q
    ||||||||| ||||| || ||||  |||||||||||||||||||||||||||||  |||||||||||||||||||| ||| ||  ||||| |||||||||    
T  20418891 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcaccctttctg 20418990  T
Q  338 attt 341  Q
    ||||    
T  20418991 attt 20418994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 235 - 341
Target Start/End: Complemental strand, 3205147 - 3205041
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||||| ||||| || ||||  |||| |||||||||||||||||||||| |  |||||||||||||||||||| ||| ||  ||||||||||||    
T  3205147 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccgtagttttaaacgagcgattttgccccctatagttttcccccttt 3205048  T
Q  335 ctgattt 341  Q
    |||||||    
T  3205047 ctgattt 3205041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 235 - 341
Target Start/End: Original strand, 17156967 - 17157073
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||||| ||||| || ||||  |||| ||||||||||||||||||||||||  ||||||| |||||||||||| ||| ||  ||||||||||||    
T  17156967 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaatgagcgattttgccccctatagttttcccccttt 17157066  T
Q  335 ctgattt 341  Q
    |||||||    
T  17157067 ctgattt 17157073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 235 - 341
Target Start/End: Original strand, 29292922 - 29293028
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||||| ||||| || ||||  ||||||||||||||||||||||| |||||  ||| |||||||||||||||| ||| ||  ||||||||||||    
T  29292922 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcatcccattgtttaaaacgagcgattttgccccctatagttttcccccttt 29293021  T
Q  335 ctgattt 341  Q
    |||||||    
T  29293022 ctgattt 29293028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 235 - 341
Target Start/End: Original strand, 37971960 - 37972066
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||||| ||||| || || |  |||||||||||||||||||||||||||||  |||||||||||||||||||| ||| ||  |||| |||||||    
T  37971960 ggcttaattgcacttttctcccctgtagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagtttttccccttt 37972059  T
Q  335 ctgattt 341  Q
    |||||||    
T  37972060 ctgattt 37972066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 233 - 341
Target Start/End: Complemental strand, 36527854 - 36527746
Alignment:
Q  233 ttggcttaattgcatttttcacctc-tatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccc 331  Q
    |||||||||||||||||||| |||| |||  |||||||||| |||||||||||| |||||  |||||||||||||||||||| ||| ||  |||||||||    
T  36527854 ttggcttaattgcatttttc-cctcatatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccc 36527756  T
Q  332 tttctgattt 341  Q
    ||||||||||    
T  36527755 tttctgattt 36527746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 235 - 341
Target Start/End: Original strand, 9034867 - 9034974
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcacccc-atgtttttaaacgagcgattttgcaccccatctttttccccctt 333  Q
    |||||||||||| ||||| || ||||  |||||||||||||||||| |||||||| ||  |||||||||||||||||||| ||| ||  |||||||||||    
T  9034867 ggcttaattgcacttttcccccctataatttgccaattgtgcgattctgcacccccatagttttaaacgagcgattttgccccctatagttttccccctt 9034966  T
Q  334 tctgattt 341  Q
    ||||||||    
T  9034967 tctgattt 9034974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 235 - 341
Target Start/End: Complemental strand, 13744286 - 13744181
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||||| ||||| || ||||  |||| ||||||||||||||||||||||||  |||||||||||||||||||| ||| ||  ||||||||||||    
T  13744286 ggcttaattgcacttttcccc-ctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 13744188  T
Q  335 ctgattt 341  Q
     ||||||    
T  13744187 ttgattt 13744181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 235 - 341
Target Start/End: Complemental strand, 38826967 - 38826861
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||||||||||| || ||||  |||| |||||||||||||||||||| |||  |||||||||| || |||||| ||| ||  ||||||||||||    
T  38826967 ggcttaattgcatttttcccccctatagtttgtcaattgtgcgattttgcacctcatagttttaaacgaacggttttgccccctatagttttcccccttt 38826868  T
Q  335 ctgattt 341  Q
    |||||||    
T  38826867 ctgattt 38826861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 263 - 341
Target Start/End: Original strand, 3204695 - 3204773
Alignment:
Q  263 tttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctgattt 341  Q
    |||||||||||||||||||||||||||||  |||||||||||| ||||||| ||| ||  ||||||| |||||||||||    
T  3204695 tttgccaattgtgcgattttgcaccccatagttttaaacgagcaattttgccccctatagttttccctctttctgattt 3204773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 263 - 341
Target Start/End: Complemental strand, 18864428 - 18864350
Alignment:
Q  263 tttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctgattt 341  Q
    ||||||||||||||||||||||||| |||  ||||||| |||||||||||| ||| ||  |||||||||||||||||||    
T  18864428 tttgccaattgtgcgattttgcacctcatagttttaaaagagcgattttgccccctatagttttccccctttctgattt 18864350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 238 - 341
Target Start/End: Complemental strand, 42419079 - 42418976
Alignment:
Q  238 ttaattgcatttttcacctctatcttttgccaattgtgcgattttgcacccc-atgtttttaaacgagcgattttgcaccccatctttttccccctttct 336  Q
    ||||||||| ||||| || ||||  ||||||||||||||| ||||||||||| ||  |||||||||||||||||||| ||| ||  ||||||||||||||    
T  42419079 ttaattgcacttttcccc-ctatagtttgccaattgtgcgtttttgcacccccatagttttaaacgagcgattttgccccctatagttttccccctttct 42418981  T
Q  337 gattt 341  Q
    |||||    
T  42418980 gattt 42418976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 234 - 341
Target Start/End: Original strand, 48359319 - 48359424
Alignment:
Q  234 tggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctt 333  Q
    ||||||||||||| ||||| || ||||  |||| ||||||||||||||||||||||||  |||||||||||||||||| | ||| ||   ||||||||||    
T  48359319 tggcttaattgcacttttcccc-ctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttaccccctat-agtttccccctt 48359416  T
Q  334 tctgattt 341  Q
    ||||||||    
T  48359417 tctgattt 48359424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 267 - 341
Target Start/End: Complemental strand, 48359680 - 48359606
Alignment:
Q  267 ccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctgattt 341  Q
    ||||||||||||||||||||| |||  ||| |||||||||||||||| ||| ||  |||||||||||||||||||    
T  48359680 ccaattgtgcgattttgcaccacatagtttaaaacgagcgattttgccccctatagttttccccctttctgattt 48359606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 238 - 330
Target Start/End: Complemental strand, 22740641 - 22740550
Alignment:
Q  238 ttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccc 330  Q
    ||||||||| ||||| || ||||  |||| ||||||||||||||||||||||||  |||||||||||||||||||| ||| ||  ||||||||    
T  22740641 ttaattgcacttttcccc-ctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgctccctatagttttcccc 22740550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 233 - 341
Target Start/End: Complemental strand, 29292097 - 29291990
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatcttttt-ccccc 331  Q
    |||||||||||||| ||||  |||||| ||||||| |||||||||||||| |||||| | |||||     ||||||||||||||| |||||||| ||||     
T  29292097 ttggcttaattgcacttttttcctctaacttttgctaattgtgcgattttccaccccctcttttt--tttagcgattttgcaccctatctttttgcccca 29292000  T
Q  332 tttctgattt 341  Q
    ||||||||||    
T  29291999 tttctgattt 29291990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 235 - 341
Target Start/End: Original strand, 42418591 - 42418697
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    ||||||||| || ||||| || ||||  ||||| ||||||||||||||| | || ||  |||||||||||||||||||| ||| ||  ||||||||||||    
T  42418591 ggcttaatttcacttttcccccctatagtttgctaattgtgcgattttgtatcctatagttttaaacgagcgattttgccccctatagttttcccccttt 42418690  T
Q  335 ctgattt 341  Q
    || ||||    
T  42418691 ctaattt 42418697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 233 - 289
Target Start/End: Complemental strand, 13772957 - 13772901
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcacccc 289  Q
    |||||||||||||| ||||| || ||||| ||||| |||||||||||||||||||||    
T  13772957 ttggcttaattgcacttttcccccctatcatttgctaattgtgcgattttgcacccc 13772901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 237 - 289
Target Start/End: Complemental strand, 34236030 - 34235978
Alignment:
Q  237 cttaattgcatttttcacctctatcttttgccaattgtgcgattttgcacccc 289  Q
    |||||||| ||||||| | |||||||||||| |||||||||||||||||||||    
T  34236030 cttaattgtatttttcccttctatcttttgctaattgtgcgattttgcacccc 34235978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 262 - 342
Target Start/End: Original strand, 46815195 - 46815275
Alignment:
Q  262 ttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctgatttg 342  Q
    ||||| ||||||||| || ||||| | ||| ||||||||| | |||| |||||| ||||| ||||||||||||||||||||    
T  46815195 ttttgtcaattgtgcaatcttgcatctcatatttttaaacaaacgatcttgcactccatcattttccccctttctgatttg 46815275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 288
Target Start/End: Complemental strand, 38191621 - 38191566
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccc 288  Q
    ||||||||||||||||||| ||| ||||||||||  |||| |||||||||||||||    
T  38191621 ttggcttaattgcattttttacccctatcttttgttaattatgcgattttgcaccc 38191566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 325
Target Start/End: Original strand, 9412023 - 9412113
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttt 325  Q
    |||||||||||| ||||| ||  |||||||||  ||||||||||||||||||||| | |||||    |||||||||| ||||| |||||||    
T  9412023 ggcttaattgcacttttcccccttatcttttgttaattgtgcgattttgcaccccctctttttttttgagcgattttccaccctatctttt 9412113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 325
Target Start/End: Complemental strand, 23686771 - 23686683
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttt 325  Q
    |||||||||||| ||||  || ||||||||||| ||||||||||||||| ||||| | |||||    ||||||||||||||||||||||||    
T  23686771 ggcttaattgcactttttccccctatcttttgctaattgtgcgattttg-acccc-tcttttttttggagcgattttgcaccccatctttt 23686683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 296
Target Start/End: Original strand, 13772641 - 13772702
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttt 296  Q
    |||||||||||| |||||  | ||||||||||| ||||||| ||||||||||||||| ||||    
T  13772641 ggcttaattgcacttttcctccctatcttttgctaattgtgtgattttgcaccccatctttt 13772702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 236 - 296
Target Start/End: Complemental strand, 18925373 - 18925315
Alignment:
Q  236 gcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttt 296  Q
    ||||||||||| |||||  |||||| |||||| ||||||||||||||||||||||| ||||    
T  18925373 gcttaattgcacttttc--ctctatattttgctaattgtgcgattttgcaccccatttttt 18925315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 296
Target Start/End: Complemental strand, 33628714 - 33628653
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttt 296  Q
    |||| ||||||| ||||  |||||||||||| | ||||||||||||||||||||||| ||||    
T  33628714 ggctaaattgcactttttccctctatcttttactaattgtgcgattttgcaccccatctttt 33628653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 236 - 326
Target Start/End: Original strand, 5735253 - 5735344
Alignment:
Q  236 gcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcac-cccatgtttttaaacgagcgattttgcaccccatcttttt 326  Q
    ||||||||||| ||||| || |||||||| || |||||||||||||||||| ||  | |||||    ||||||||||||||| |||||||||    
T  5735253 gcttaattgcacttttctcccctatctttggctaattgtgcgattttgcactcctttttttttttttgagcgattttgcaccacatcttttt 5735344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 325
Target Start/End: Original strand, 3687351 - 3687445
Alignment:
Q  233 ttggcttaattgcatttttcacctc-tatcttttgccaattgtgcgattttgcaccccat-gtttttaaacgagcgattttgcaccccatctttt 325  Q
    |||||||||||||| ||||| || | |||||||||  ||||||||||||||||||||| |  |||||    |||||||||||||||| |||||||    
T  3687351 ttggcttaattgcacttttccccccctatcttttgttaattgtgcgattttgcaccccctcttttttttttgagcgattttgcaccctatctttt 3687445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 269 - 325
Target Start/End: Original strand, 5349497 - 5349550
Alignment:
Q  269 aattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttt 325  Q
    ||||||||||||||||||||| | |||||    ||||||||||||||||||||||||    
T  5349497 aattgtgcgattttgcaccccctttttttt---gagcgattttgcaccccatctttt 5349550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 304 - 341
Target Start/End: Complemental strand, 5349747 - 5349709
Alignment:
Q  304 gcgattttgcaccccatcttttt-ccccctttctgattt 341  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  5349747 gcgattttgcaccccatctttttaccccctttctgattt 5349709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 298
Target Start/End: Complemental strand, 5349785 - 5349724
Alignment:
Q  234 tggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgttttta 298  Q
    ||||||||||||| |||   || ||||||||||  ||||||||||||||||||||||| ||||||    
T  5349785 tggcttaattgcacttt---cccctatcttttgttaattgtgcgattttgcaccccatcttttta 5349724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 287
Target Start/End: Original strand, 18925060 - 18925114
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcacc 287  Q
    |||||||||||||| |||||  | ||||||||||| |||||||| ||||||||||    
T  18925060 ttggcttaattgcacttttcttccctatcttttgctaattgtgcaattttgcacc 18925114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 341
Target Start/End: Original strand, 36527411 - 36527489
Alignment:
Q  263 tttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctgattt 341  Q
    |||| ||||||||||||||||||||||||  |||||||||| | ||||| | ||  ||  |||| ||||||||||||||    
T  36527411 tttgtcaattgtgcgattttgcaccccatagttttaaacgatcaatttttccccttatagtttttcccctttctgattt 36527489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 325
Target Start/End: Original strand, 29291808 - 29291896
Alignment:
Q  237 cttaattgca-tttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttt 325  Q
    |||||||||| |||||| || ||||||||||  |||| |||||||||||||||| | |||||    |||||||||| |||||||||||||    
T  29291808 cttaattgcactttttctcc-ctatcttttgataattatgcgattttgcaccccctcttttttttagagcgattttacaccccatctttt 29291896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 318
Target Start/End: Complemental strand, 8953941 - 8953863
Alignment:
Q  236 gcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcacccc 318  Q
    ||||||||||| ||||| || ||||||||||  |||||||| |||||||||||| | ||||| |   ||||||||||||||||    
T  8953941 gcttaattgcacttttcccc-ctatcttttgttaattgtgcaattttgcaccccctctttttta---agcgattttgcacccc 8953863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 291
Target Start/End: Complemental strand, 16199003 - 16198975
Alignment:
Q  263 tttgccaattgtgcgattttgcaccccat 291  Q
    |||||||||||||||||||||||||||||    
T  16199003 tttgccaattgtgcgattttgcaccccat 16198975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 106; Significance: 6e-53; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 233 - 346
Target Start/End: Original strand, 33828988 - 33829101
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccct 332  Q
    |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33828988 ttggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccct 33829087  T
Q  333 ttctgatttggagg 346  Q
    ||||||||||||||    
T  33829088 ttctgatttggagg 33829101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 235 - 373
Target Start/End: Complemental strand, 33829690 - 33829553
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33829690 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 33829591  T
Q  335 ctgatttggaggnnnnnnnatgtgttttagtgatgatgt 373  Q
    ||||||||||||       ||||||||||||||||||||    
T  33829590 ctgatttggagg-ccccccatgtgttttagtgatgatgt 33829553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 234 - 341
Target Start/End: Complemental strand, 33974354 - 33974247
Alignment:
Q  234 tggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctt 333  Q
    ||||||||||||||||||| || ||||  |||||||||||||||||||||||||||||  |||||||||||||||||||| ||| ||  |||||||||||    
T  33974354 tggcttaattgcatttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctt 33974255  T
Q  334 tctgattt 341  Q
    ||||||||    
T  33974254 tctgattt 33974247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 233 - 341
Target Start/End: Complemental strand, 18242212 - 18242103
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatcttttt-ccccc 331  Q
    |||||||||||||||||||   | ||||||||||||||||||||||||||||||||| | |||||    ||||||||||||||||||||||||| |||||    
T  18242212 ttggcttaattgcattttttttccctatcttttgccaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgccccc 18242113  T
Q  332 tttctgattt 341  Q
    ||||||||||    
T  18242112 tttctgattt 18242103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 235 - 341
Target Start/End: Complemental strand, 3404043 - 3403936
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatcttttt-ccccctt 333  Q
    |||||||||||| ||||| || ||||||||||| ||||||||||||||||||||| | |||||    ||||||||||||||||||||||||| |||||||    
T  3404043 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgccccctt 3403944  T
Q  334 tctgattt 341  Q
    ||||||||    
T  3403943 tctgattt 3403936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 234 - 341
Target Start/End: Complemental strand, 10087913 - 10087806
Alignment:
Q  234 tggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctt 333  Q
    ||||||||||||| ||||| || || |  |||||||||||||||||||||||||||||  |||||||||||||||||||| ||| ||  |||||||||||    
T  10087913 tggcttaattgcacttttcccccctttagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctt 10087814  T
Q  334 tctgattt 341  Q
    ||||||||    
T  10087813 tctgattt 10087806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 235 - 341
Target Start/End: Complemental strand, 7654602 - 7654496
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||||| ||||| || ||||  |||| ||||||||||||||||||||||||  ||||||||||| || ||||| ||| ||  ||||||||||||    
T  7654602 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagtgactttgccccctatagttttcccccttt 7654503  T
Q  335 ctgattt 341  Q
    |||||||    
T  7654502 ctgattt 7654496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 233 - 341
Target Start/End: Complemental strand, 32734052 - 32733944
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccct 332  Q
    |||| ||||||||| |||||  | ||||  ||||||||||||||||||||||| |||||  |||||||||||||||||||| ||| ||  ||||| ||||    
T  32734052 ttggtttaattgcacttttcctccctatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctataattttctccct 32733953  T
Q  333 ttctgattt 341  Q
    |||||||||    
T  32733952 ttctgattt 32733944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 235 - 337
Target Start/End: Original strand, 21031979 - 21032081
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatcttttt-ccccctt 333  Q
    |||||||||||| ||||| || ||| ||||||| ||||||||||||||||||||| | |||||    ||||||||||||||||||||||||| |||||||    
T  21031979 ggcttaattgcacttttcccc-ctaacttttgctaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgccccctt 21032077  T
Q  334 tctg 337  Q
    ||||    
T  21032078 tctg 21032081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 257 - 341
Target Start/End: Complemental strand, 30388394 - 30388311
Alignment:
Q  257 ctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatcttttt-ccccctttctgattt 341  Q
    ||||||||||| ||||||||||||||||||||| | |||||    ||||||||||||||||||||||||| |||||||||||||||    
T  30388394 ctatcttttgctaattgtgcgattttgcacccccttttttt--ttgagcgattttgcaccccatctttttaccccctttctgattt 30388311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 224 - 325
Target Start/End: Original strand, 10039665 - 10039764
Alignment:
Q  224 aataataagttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctt 323  Q
    ||||||| || |||||||||||| ||||| || ||||||||||| ||||||||||||||||||||| | |||||  | |||||||||| |||||||||||    
T  10039665 aataatatgtaggcttaattgcacttttcccc-ctatcttttgctaattgtgcgattttgcacccc-tctttttttatgagcgattttacaccccatctt 10039762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 233 - 325
Target Start/End: Complemental strand, 11656838 - 11656746
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttt 325  Q
    |||||||||||||| ||||| |  ||||||||||| ||||||||||||||||||||| | ||| |    ||||||||||||||||||||||||    
T  11656838 ttggcttaattgcacttttctctcctatcttttgctaattgtgcgattttgcaccccctctttatttttgagcgattttgcaccccatctttt 11656746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 233 - 341
Target Start/End: Complemental strand, 22684413 - 22684306
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccct 332  Q
    |||||||||||||| ||||| ||| |||  ||||||||||||| |||||||||||||||  |||||||| | ||||||||| ||| ||  |||| |||||    
T  22684413 ttggcttaattgcacttttcccct-tatagtttgccaattgtgtgattttgcaccccatagttttaaacaaacgattttgccccctatagtttttcccct 22684315  T
Q  333 ttctgattt 341  Q
    |||||||||    
T  22684314 ttctgattt 22684306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 233 - 341
Target Start/End: Original strand, 22754655 - 22754762
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccct 332  Q
    |||||||||||||| ||||| ||| |||  ||||||||||||| |||||||||||||||  |||||||| | ||||||||| ||| ||  |||| |||||    
T  22754655 ttggcttaattgcacttttcccct-tatagtttgccaattgtgtgattttgcaccccatagttttaaacaaacgattttgccccctatagtttttcccct 22754753  T
Q  333 ttctgattt 341  Q
    |||||||||    
T  22754754 ttctgattt 22754762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 235 - 330
Target Start/End: Complemental strand, 2354864 - 2354769
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccc 330  Q
    |||||||||||||||||| | |||||  |||| ||||||||||||||||||||||||  ||| |||||||| ||||||| ||| ||  ||||||||    
T  2354864 ggcttaattgcatttttcccgtctatagtttgtcaattgtgcgattttgcaccccattgtttaaaacgagccattttgccccctatagttttcccc 2354769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 233 - 296
Target Start/End: Original strand, 3403715 - 3403778
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttt 296  Q
    |||||||||||||| ||||| || ||||||||||| ||||||||||||||||||||||| ||||    
T  3403715 ttggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccatctttt 3403778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 263 - 341
Target Start/End: Complemental strand, 29074398 - 29074320
Alignment:
Q  263 tttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctgattt 341  Q
    |||||||||||||||||||||||||||||  ||| |||||||||||||| | ||| ||  ||||| |||||||||||||    
T  29074398 tttgccaattgtgcgattttgcaccccatagtttaaaacgagcgattttcccccctatagttttcgccctttctgattt 29074320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 263 - 341
Target Start/End: Complemental strand, 29079162 - 29079084
Alignment:
Q  263 tttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctgattt 341  Q
    |||||||||||||||||||||||||||||  ||| |||||||||||||| | ||| ||  ||||| |||||||||||||    
T  29079162 tttgccaattgtgcgattttgcaccccatagtttaaaacgagcgattttcccccctatagttttcgccctttctgattt 29079084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 263 - 341
Target Start/End: Complemental strand, 29106971 - 29106893
Alignment:
Q  263 tttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctgattt 341  Q
    |||||||||||||||||||||||||||||  ||| |||||||||||||| | ||| ||  ||||| |||||||||||||    
T  29106971 tttgccaattgtgcgattttgcaccccatagtttaaaacgagcgattttcccccctatagttttcgccctttctgattt 29106893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 236 - 341
Target Start/End: Complemental strand, 22755142 - 22755038
Alignment:
Q  236 gcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttc 335  Q
    ||||||||||| ||||| ||| |||  |||| ||||| |||||||||||||| |||  |||||||||||||||||||| ||| ||  |||| ||||||||    
T  22755142 gcttaattgcacttttcccctttatagtttgtcaattatgcgattttgcaccacatagttttaaacgagcgattttgccccctatagtttt-cccctttc 22755044  T
Q  336 tgattt 341  Q
    ||||||    
T  22755043 tgattt 22755038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 233 - 341
Target Start/End: Original strand, 2354407 - 2354514
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccct 332  Q
    |||||||||||||||||||| || ||||  |||  ||||||| |||||||||| |||||  ||| |||||||||||||| | ||| ||  ||||||||||    
T  2354407 ttggcttaattgcatttttcccc-ctatagtttttcaattgtacgattttgcatcccattgtttaaaacgagcgatttttccccctatagttttccccct 2354505  T
Q  333 ttctgattt 341  Q
    |||||||||    
T  2354506 ttctgattt 2354514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 235 - 331
Target Start/End: Complemental strand, 31598326 - 31598231
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccc 331  Q
    |||||||||| ||||||| |||||||||||||| ||||||||||||||||||||    |||||    |||| |||||||||||||||||||| ||||    
T  31598326 ggcttaattgtatttttc-cctctatcttttgctaattgtgcgattttgcacccttcttttttttttgagcaattttgcaccccatctttttgcccc 31598231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 263 - 341
Target Start/End: Original strand, 13176647 - 13176725
Alignment:
Q  263 tttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctgattt 341  Q
    |||||||||||| |||||||| | |||||| ||||||| |||||||||||| ||| ||  ||||||| |||||||||||    
T  13176647 tttgccaattgtacgattttgtatcccatgattttaaatgagcgattttgccccctatagttttcccactttctgattt 13176725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 235 - 325
Target Start/End: Original strand, 18241854 - 18241944
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttt 325  Q
    |||||||||||| ||||| || ||||||||||  ||||||||||||||||||||| | ||||     |||||||||||||||| |||||||    
T  18241854 ggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccctcttttgttttgagcgattttgcaccctatctttt 18241944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 238 - 341
Target Start/End: Original strand, 32733560 - 32733663
Alignment:
Q  238 ttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctg 337  Q
    |||| |||||||||  |||||||  |||||||||| | |||||||||| |||||  |||||||||||| |||||||  || ||  |||| ||||||||||    
T  32733560 ttaagtgcattttttccctctatagtttgccaattatacgattttgcatcccatagttttaaacgagcaattttgcctcctatagtttttcccctttctg 32733659  T
Q  338 attt 341  Q
    ||||    
T  32733660 attt 32733663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 341
Target Start/End: Original strand, 2762510 - 2762590
Alignment:
Q  262 ttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatcttttt-ccccctttctgattt 341  Q
    |||||| ||||||||||||||||||||| | |||||    ||| ||||||||||| ||||||||| |||||||| ||||||    
T  2762510 ttttgctaattgtgcgattttgcaccccctctttttttttgagtgattttgcacctcatctttttgccccctttttgattt 2762590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 325
Target Start/End: Original strand, 30388060 - 30388150
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttt 325  Q
    |||||||||||||| ||| | || ||||||||||| ||||||||||||||||| ||  | |||||    ||||||||||||||||||||||||    
T  30388060 ttggcttaattgcactttccccc-ctatcttttgctaattgtgcgattttgcagcctctcttttt-tttgagcgattttgcaccccatctttt 30388150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 235 - 325
Target Start/End: Complemental strand, 21032334 - 21032243
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcacc-ccatgtttttaaacgagcgattttgcaccccatctttt 325  Q
    |||||||||||| ||||| || ||||||||||  |||||||||||||||| || ||   |||||    ||||||||||||||||||||||||    
T  21032334 ggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcgcctcctcttttttctttgagcgattttgcaccccatctttt 21032243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 289
Target Start/End: Complemental strand, 13579704 - 13579651
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcacccc 289  Q
    |||||||||||| ||||| || ||||| ||||| |||||||||||||||||||||    
T  13579704 ggcttaattgcacttttctcc-ctatcgtttgctaattgtgcgattttgcacccc 13579651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 341
Target Start/End: Complemental strand, 13177077 - 13177004
Alignment:
Q  268 caattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctgattt 341  Q
    |||||||| |||||| |||| |||  |||||||||||||||||||| ||  ||  || ||||||||||||||||    
T  13177077 caattgtgagattttacacctcatagttttaaacgagcgattttgccccttatagttgtccccctttctgattt 13177004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Complemental strand, 23250877 - 23250840
Alignment:
Q  303 agcgattttgcaccccatctttttccccctttctgatt 340  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  23250877 agcgattttgtaccccatcttttgccccctttctgatt 23250840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 105; Significance: 2e-52; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 233 - 345
Target Start/End: Complemental strand, 18817667 - 18817555
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccct 332  Q
    |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18817667 ttggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccct 18817568  T
Q  333 ttctgatttggag 345  Q
    |||||||||||||    
T  18817567 ttctgatttggag 18817555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 235 - 346
Target Start/End: Original strand, 18816952 - 18817063
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  18816952 ggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcatcccatctttttcccccttt 18817051  T
Q  335 ctgatttggagg 346  Q
    ||||||||||||    
T  18817052 ctgatttggagg 18817063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 235 - 373
Target Start/End: Original strand, 11350808 - 11350944
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  11350808 ggcttaattgcatttttcacccctatcttttgccaattgtgc-attttgcaccccatatttttaaacgagcgattttgcaccccatctttttcccccttt 11350906  T
Q  335 ctgatttggaggnnnnnnnatgtgttttagtgatgatgt 373  Q
     |||||||||||       ||||||||||||||||||||    
T  11350907 ttgatttggagg-ccccccatgtgttttagtgatgatgt 11350944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 238 - 346
Target Start/End: Complemental strand, 11351478 - 11351371
Alignment:
Q  238 ttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctg 337  Q
    ||||||||| |||||||  ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| |||||||||||| ||    
T  11351478 ttaattgcacttttcactcctatcttttgccaattgtgcgattttgcaccccatatttttaaacgagcgattttacaccccatc-ttttccccctttatg 11351380  T
Q  338 atttggagg 346  Q
    |||||||||    
T  11351379 atttggagg 11351371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 109 - 231
Target Start/End: Original strand, 34645243 - 34645366
Alignment:
Q  109 tgaattaataccatt-aaatgtaattgcatcgaatggaaattacacccccattaaccaaattccattgaaaaactgatcttatcatatcgcactaattca 207  Q
    |||||| |||||||| |||||||||||||||||||||||||||| || |||||||||||||||||||||||| |||||||||||| ||| ||| || |||    
T  34645243 tgaattgataccattcaaatgtaattgcatcgaatggaaattactccaccattaaccaaattccattgaaaatctgatcttatcaaatcccaccaactca 34645342  T
Q  208 aaattagtactagtagaataataa 231  Q
     |||||||||||||| ||||||||    
T  34645343 gaattagtactagtataataataa 34645366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 233 - 341
Target Start/End: Original strand, 18433013 - 18433122
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatcttttt-ccccc 331  Q
    |||||||||||||| ||||| || ||||||||||| ||||||||||||||||||||||| |||||    ||||||||||||||||||||||||| |||||    
T  18433013 ttggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccatctttttttttgagcgattttgcaccccatctttttgccccc 18433112  T
Q  332 tttctgattt 341  Q
    ||||||||||    
T  18433113 tttctgattt 18433122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 235 - 341
Target Start/End: Original strand, 12498567 - 12498673
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||||| ||||| || ||||  |||||||||||||||||||||||||||||  |||||||||||||||||||| ||| ||  ||||||||||||    
T  12498567 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 12498666  T
Q  335 ctgattt 341  Q
    |||||||    
T  12498667 ctgattt 12498673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 235 - 341
Target Start/End: Original strand, 25115757 - 25115864
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatcttttt-ccccctt 333  Q
    |||||||||||| ||||| || ||||||||||||||||||| ||||||||||||| | |||||    ||||||||||||||||||||||||| |||||||    
T  25115757 ggcttaattgcacttttcccccctatcttttgccaattgtgtgattttgcaccccctttttttttttgagcgattttgcaccccatctttttgccccctt 25115856  T
Q  334 tctgattt 341  Q
    ||||||||    
T  25115857 tctgattt 25115864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 235 - 341
Target Start/End: Original strand, 25174849 - 25174956
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatcttttt-ccccctt 333  Q
    |||||||||||| ||||| || ||||||||||||||||||| ||||||||||||| | |||||    ||||||||||||||||||||||||| |||||||    
T  25174849 ggcttaattgcacttttcccccctatcttttgccaattgtgtgattttgcaccccctttttttttttgagcgattttgcaccccatctttttgccccctt 25174948  T
Q  334 tctgattt 341  Q
    ||||||||    
T  25174949 tctgattt 25174956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 235 - 341
Target Start/End: Complemental strand, 12498982 - 12498876
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||||| ||||| || ||||  |||||||||||||||||||||||||||||  |||||||| ||||||||||| ||| ||  ||||||||||||    
T  12498982 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacaagcgattttgccccctatagttttcccccttt 12498883  T
Q  335 ctgattt 341  Q
    |||||||    
T  12498882 ctgattt 12498876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 235 - 341
Target Start/End: Complemental strand, 26571218 - 26571112
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||||| ||||| || ||||  |||||||||||||||||||||||||||||  |||||||||||||||||||| ||| ||  |||||| |||||    
T  26571218 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcctccttt 26571119  T
Q  335 ctgattt 341  Q
    |||||||    
T  26571118 ctgattt 26571112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 236 - 341
Target Start/End: Complemental strand, 22729492 - 22729388
Alignment:
Q  236 gcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttc 335  Q
    ||||||||||| ||||| || ||||  |||||||||||||||||||||||||||||  |||||||||||||||||||| ||| ||  |||||||||||||    
T  22729492 gcttaattgcacttttcccc-ctataatttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttc 22729394  T
Q  336 tgattt 341  Q
    ||||||    
T  22729393 tgattt 22729388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 233 - 341
Target Start/End: Original strand, 3888237 - 3888345
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccct 332  Q
    ||||||||||||||  |||| || ||||  |||||||||||| ||||||||||||||||  |||||||||||||||||||| ||| ||  ||||||||||    
T  3888237 ttggcttaattgcacatttcccccctatagtttgccaattgtacgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccct 3888336  T
Q  333 ttctgattt 341  Q
    |||||||||    
T  3888337 ttctgattt 3888345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 257 - 341
Target Start/End: Original strand, 42919326 - 42919410
Alignment:
Q  257 ctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctgattt 341  Q
    |||| |||| |||||||||||||||| |||| ||||||||||||||||||||||||||||| ||| |||| ||||||||||||||    
T  42919326 ctatatttttccaattgtgcgatttttcaccacatgtttttaaacgagcgattttgcaccctatcatttttcccctttctgattt 42919410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 238 - 341
Target Start/End: Original strand, 21207229 - 21207332
Alignment:
Q  238 ttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctg 337  Q
    ||||||||| ||||| || ||||  |||||||||||||||||||||||||||||  |||||||||||||||||||| ||| ||  ||||| |||||||||    
T  21207229 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcaccctttctg 21207328  T
Q  338 attt 341  Q
    ||||    
T  21207329 attt 21207332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 235 - 341
Target Start/End: Original strand, 26020450 - 26020557
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatcttttt-ccccctt 333  Q
    |||||||||||| |||||  | ||||||||||| ||||||||||||||||||||||| |||||    ||||||||||||||| ||||||||| |||||||    
T  26020450 ggcttaattgcacttttcctccctatcttttgctaattgtgcgattttgcaccccatctttttttttgagcgattttgcaccgcatctttttgccccctt 26020549  T
Q  334 tctgattt 341  Q
    ||||||||    
T  26020550 tctgattt 26020557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 263 - 341
Target Start/End: Original strand, 19514554 - 19514632
Alignment:
Q  263 tttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctgattt 341  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||| ||| ||  |||||||||||||||||||    
T  19514554 tttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctgattt 19514632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 238 - 341
Target Start/End: Original strand, 43463759 - 43463861
Alignment:
Q  238 ttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctg 337  Q
    ||||||||| ||||| ||| |||  |||||||||||||||||||||||||||||  |||||||||||||||||||| ||| ||  ||||| |||||||||    
T  43463759 ttaattgcacttttcccct-tatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttctccctttctg 43463857  T
Q  338 attt 341  Q
    ||||    
T  43463858 attt 43463861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 263 - 341
Target Start/End: Complemental strand, 3888688 - 3888610
Alignment:
Q  263 tttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctgattt 341  Q
    |||||||||||| ||||||||||||||||  |||||||||||||||||||| ||| ||  |||||||||||||||||||    
T  3888688 tttgccaattgtacgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctgattt 3888610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 235 - 341
Target Start/End: Complemental strand, 19515017 - 19514911
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||||| ||||| || ||||  |||| ||||||||||||||||||||||||  |||||||||||  ||||||| ||| ||  ||||||||||||    
T  19515017 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagttattttgccccctatagttttcccccttt 19514918  T
Q  335 ctgattt 341  Q
    |||||||    
T  19514917 ctgattt 19514911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 235 - 341
Target Start/End: Original strand, 25940521 - 25940627
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||||||||||  || ||||  |||| ||||||||||||||||||||| ||  |||||||||||||||||||| ||| ||  ||||| ||||||    
T  25940521 ggcttaattgcatttttttcccctatagtttgtcaattgtgcgattttgcaccctatagttttaaacgagcgattttgccccctatagttttcacccttt 25940620  T
Q  335 ctgattt 341  Q
    |||||||    
T  25940621 ctgattt 25940627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 235 - 341
Target Start/End: Original strand, 26570729 - 26570835
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    ||||||||| || ||||| || ||||  |||| ||||||||||||||||||||||||  |||||||||||||||||||  ||| ||  ||||||||||||    
T  26570729 ggcttaattacacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgtcccctatagttttcccccttt 26570828  T
Q  335 ctgattt 341  Q
    |||||||    
T  26570829 ctgattt 26570835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 235 - 341
Target Start/End: Complemental strand, 43464245 - 43464140
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||||| ||||| || ||||  |||| |||||||||||||||||||| |||  |||||||||||||||||||| ||| ||  ||||||||||||    
T  43464245 ggcttaattgcacttttcccc-ctatagtttgtcaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccctatagttttcccccttt 43464147  T
Q  335 ctgattt 341  Q
    |||||||    
T  43464146 ctgattt 43464140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 238 - 341
Target Start/End: Original strand, 2817152 - 2817254
Alignment:
Q  238 ttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctg 337  Q
    ||||||||| |||||  | ||||  ||||||||||||||||||||||| |||||  |||||||||||||||||||| ||| || ||||| ||||||||||    
T  2817152 ttaattgcacttttcctccctatagtttgccaattgtgcgattttgcatcccataattttaaacgagcgattttgccccctatattttt-cccctttctg 2817250  T
Q  338 attt 341  Q
    ||||    
T  2817251 attt 2817254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 238 - 341
Target Start/End: Complemental strand, 11317025 - 11316922
Alignment:
Q  238 ttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctg 337  Q
    ||||||||| ||||  ||||| |  |||||||||||||||||||||||||||||  ||||||| |||||||||||| ||| ||  ||||||| |||||||    
T  11317025 ttaattgcacttttttcctctgtactttgccaattgtgcgattttgcaccccattgttttaaatgagcgattttgccccctatagttttccctctttctg 11316926  T
Q  338 attt 341  Q
    ||||    
T  11316925 attt 11316922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 238 - 312
Target Start/End: Original strand, 31569910 - 31569983
Alignment:
Q  238 ttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttg 312  Q
    ||||||||| ||||| || |||||||||| |||||||||||||||||||| |||||||||||||||| |||||||    
T  31569910 ttaattgcacttttcccc-ctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 31569983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 235 - 341
Target Start/End: Complemental strand, 34147564 - 34147458
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||||| ||||  || ||||  |||| |||||||||||||||||||| | |  |||||||||||||||||||| ||| ||  ||||||||||||    
T  34147564 ggcttaattgcactttttccccctatagtttgtcaattgtgcgattttgcacctcgtagttttaaacgagcgattttgccccctatagttttcccccttt 34147465  T
Q  335 ctgattt 341  Q
    |||||||    
T  34147464 ctgattt 34147458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 268 - 341
Target Start/End: Original strand, 34147172 - 34147245
Alignment:
Q  268 caattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctgattt 341  Q
    |||||||||||||||||||||| |  |||||||||||||||||||| ||| ||  |||||||||||||||||||    
T  34147172 caattgtgcgattttgcaccccgtagttttaaacgagcgattttgccccctatagttttccccctttctgattt 34147245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 257 - 341
Target Start/End: Original strand, 34576888 - 34576972
Alignment:
Q  257 ctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatcttttt-ccccctttctgattt 341  Q
    ||||||||||| |||||||||||||| |||||||| |||||    ||||||||||||||||||||||||| |||||||||||||||    
T  34576888 ctatcttttgctaattgtgcgattttacaccccatctttttttt-gagcgattttgcaccccatctttttgccccctttctgattt 34576972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 230 - 341
Target Start/End: Original strand, 22729003 - 22729112
Alignment:
Q  230 aagttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccc 329  Q
    ||||||||||||||||| ||||| || ||||  ||||  ||||||||||||||||||  |||  |||||||||||||||||||| ||| ||  |||||||    
T  22729003 aagttggcttaattgcacttttcccc-ctatagtttgtaaattgtgcgattttgcacttcatagttttaaacgagcgattttgc-ccctatagttttccc 22729100  T
Q  330 cctttctgattt 341  Q
    ||||||||||||    
T  22729101 cctttctgattt 22729112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 235 - 325
Target Start/End: Complemental strand, 18433370 - 18433281
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttt 325  Q
    |||||||||||| ||||| || ||||||||||  ||||||||||||||||||||| | |||||    ||||||||||||||||||||||||    
T  18433370 ggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccctcttttt-tttgagcgattttgcaccccatctttt 18433281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 235 - 297
Target Start/End: Complemental strand, 22429249 - 22429188
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgttttt 297  Q
    |||||||||||||||||| || ||||||||||| ||||||||||||||||||||||| |||||    
T  22429249 ggcttaattgcatttttcccc-ctatcttttgctaattgtgcgattttgcaccccatcttttt 22429188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 235 - 325
Target Start/End: Complemental strand, 25175205 - 25175115
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttt 325  Q
    |||||||||||| ||||| || ||||||||||  ||||||||||||||||||||| | |||||    |||||||||||||||| |||||||    
T  25175205 ggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccctatctttt 25175115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 235 - 313
Target Start/End: Original strand, 37610202 - 37610279
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 313  Q
    |||||||||||| ||||| || ||||  ||||||||||||| |||||||||||||||  ||||||||||||||||||||    
T  37610202 ggcttaattgcacttttcccc-ctatagtttgccaattgtgtgattttgcaccccatagttttaaacgagcgattttgc 37610279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 235 - 313
Target Start/End: Original strand, 37780320 - 37780397
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 313  Q
    |||||||||||| ||||| || ||||  ||||||||||||| |||||||||||||||  ||||||||||||||||||||    
T  37780320 ggcttaattgcacttttcccc-ctatagtttgccaattgtgtgattttgcaccccatagttttaaacgagcgattttgc 37780397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 233 - 313
Target Start/End: Complemental strand, 37780798 - 37780718
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 313  Q
    |||||||||||| | ||||| || ||||  ||||| ||||||||||||||||||| |||  ||||||||||||||||||||    
T  37780798 ttggcttaattgtacttttcccccctatagtttgctaattgtgcgattttgcacctcattgttttaaacgagcgattttgc 37780718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 235 - 325
Target Start/End: Original strand, 22428934 - 22429021
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttt 325  Q
    |||||||||||| ||| | || ||||||||||| ||||||||||||||||||||||| |||||    |||| |||||||||||||||||||    
T  22428934 ggcttaattgcactttccccc-ctatcttttgctaattgtgcgattttgcaccccatcttttt--ttgagcaattttgcaccccatctttt 22429021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 233 - 288
Target Start/End: Original strand, 23011077 - 23011131
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccc 288  Q
    |||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||    
T  23011077 ttggcttaattgcatttttcccct-tatcttttgctaattgtgcgattttgcaccc 23011131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 234 - 325
Target Start/End: Complemental strand, 34577218 - 34577129
Alignment:
Q  234 tggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttt 325  Q
    ||||||||||||| ||||  || ||||||||||| ||||||| ||||||||||||||| |||||    ||||||||||||||||||||||||    
T  34577218 tggcttaattgcactttttccc-ctatcttttgctaattgtgtgattttgcaccccatcttttt-tttgagcgattttgcaccccatctttt 34577129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 263 - 341
Target Start/End: Complemental strand, 10098967 - 10098889
Alignment:
Q  263 tttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctgattt 341  Q
    |||| ||||||||||||||||||||||||  ||||||||||||||||||   ||| ||  ||||||| |||||||||||    
T  10098967 tttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttatcccctatagttttccctctttctgattt 10098889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 263 - 341
Target Start/End: Complemental strand, 37610644 - 37610567
Alignment:
Q  263 tttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctgattt 341  Q
    ||||| ||||||||||||||||||| |||  |||||||||||||||||||| ||| ||   ||||||||||||||||||    
T  37610644 tttgctaattgtgcgattttgcacctcattgttttaaacgagcgattttgccccctat-agtttccccctttctgattt 37610567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 263 - 341
Target Start/End: Complemental strand, 41072240 - 41072162
Alignment:
Q  263 tttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctgattt 341  Q
    |||| ||||||| ||||||||||||| ||  |||||||||||||||||||| ||| ||  |||||||||||||| ||||    
T  41072240 tttgtcaattgtacgattttgcaccctatagttttaaacgagcgattttgccccctatagttttccccctttctaattt 41072162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 289
Target Start/End: Complemental strand, 25116115 - 25116061
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcacccc 289  Q
    |||||||||||| ||||| || ||||||||||  |||||||||||||||||||||    
T  25116115 ggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcacccc 25116061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 341
Target Start/End: Complemental strand, 25941067 - 25940961
Alignment:
Q  236 gcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccat-ctttttcccccttt 334  Q
    ||||||||||| ||||| |  ||||  ||||  |||| |||||||||||| |||||  |||||||||||||||||||| ||| ||  |||| ||||||||    
T  25941067 gcttaattgcacttttccctcctatagtttgttaattatgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccccttt 25940968  T
Q  335 ctgattt 341  Q
    |||||||    
T  25940967 ctgattt 25940961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 326
Target Start/End: Complemental strand, 16466796 - 16466708
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatcttttt 326  Q
    |||||||||||| ||||| || |||| |||||| ||||||||||||||||| |   | |||||    |||||||||||||||||||||||||    
T  16466796 ggcttaattgcacttttcccccctatattttgctaattgtgcgattttgcatcaacttttttt---tgagcgattttgcaccccatcttttt 16466708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 233 - 330
Target Start/End: Original strand, 30401880 - 30401977
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccc 330  Q
    |||| ||||||||| |||||  ||||||  |||||||||||| | |||||||| |||||  |||||||| ||||||||||| ||| ||  ||||||||    
T  30401880 ttggtttaattgcacttttcctctctatagtttgccaattgtacaattttgcatcccatagttttaaactagcgattttgccccctataattttcccc 30401977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 313
Target Start/End: Original strand, 10098517 - 10098597
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 313  Q
    |||||||||||||| ||||  |  ||||  |||| |||||||||||||||||| || ||  ||||||||||||||||||||    
T  10098517 ttggcttaattgcactttttcctcctatagtttgtcaattgtgcgattttgcatcctatagttttaaacgagcgattttgc 10098597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 235 - 342
Target Start/End: Complemental strand, 41383220 - 41383117
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatcttttt-ccccctt 333  Q
    |||||||||| | ||||| || |||| |||||| ||||||||||||||||||||| | |||||     |||||||||||| |||||||||||  ||||||    
T  41383220 ggcttaattgaacttttcccc-ctattttttgctaattgtgcgattttgcacccctttttttt----tagcgattttgcatcccatctttttgtcccctt 41383126  T
Q  334 tctgatttg 342  Q
    ||| |||||    
T  41383125 tctcatttg 41383117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 287
Target Start/End: Original strand, 16726100 - 16726130
Alignment:
Q  257 ctatcttttgccaattgtgcgattttgcacc 287  Q
    |||||||||||||||||||||||||||||||    
T  16726100 ctatcttttgccaattgtgcgattttgcacc 16726130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 304 - 341
Target Start/End: Complemental strand, 22429210 - 22429172
Alignment:
Q  304 gcgattttgcaccccatcttttt-ccccctttctgattt 341  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  22429210 gcgattttgcaccccatctttttgccccctttctgattt 22429172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 289
Target Start/End: Complemental strand, 33324892 - 33324838
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcacccc 289  Q
    |||||||||||| ||||  || |||||||||| |||||||| |||||||||||||    
T  33324892 ggcttaattgcacttttttcccctatcttttgtcaattgtgtgattttgcacccc 33324838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 237 - 313
Target Start/End: Complemental strand, 2817626 - 2817551
Alignment:
Q  237 cttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 313  Q
    |||||||||| ||||| || ||||  ||||| |||||||||||||| || || ||  ||||||||||||||||||||    
T  2817626 cttaattgcacttttcccc-ctatagtttgcgaattgtgcgattttacatccaatagttttaaacgagcgattttgc 2817551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 297
Target Start/End: Original strand, 9665577 - 9665617
Alignment:
Q  257 ctatcttttgccaattgtgcgattttgcaccccatgttttt 297  Q
    ||||||||||| |||||||| |||||||||||||| |||||    
T  9665577 ctatcttttgctaattgtgcaattttgcaccccatcttttt 9665617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 104; Significance: 9e-52; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 235 - 346
Target Start/End: Original strand, 2638820 - 2638931
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  2638820 ggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttcccccttt 2638919  T
Q  335 ctgatttggagg 346  Q
    ||||||||||||    
T  2638920 ctgatttggagg 2638931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 235 - 346
Target Start/End: Complemental strand, 2639536 - 2639425
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2639536 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 2639437  T
Q  335 ctgatttggagg 346  Q
    ||||||||||||    
T  2639436 ctgatttggagg 2639425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 235 - 346
Target Start/End: Original strand, 26841587 - 26841698
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26841587 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 26841686  T
Q  335 ctgatttggagg 346  Q
    ||||||||||||    
T  26841687 ctgatttggagg 26841698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 233 - 373
Target Start/End: Complemental strand, 26842294 - 26842155
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccct 332  Q
    ||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26842294 ttggcttaagtgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccct 26842195  T
Q  333 ttctgatttggaggnnnnnnnatgtgttttagtgatgatgt 373  Q
    ||||||||||||||       ||||||||||||||||||||    
T  26842194 ttctgatttggagg-ccccccatgtgttttagtgatgatgt 26842155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 238 - 346
Target Start/End: Original strand, 7591204 - 7591312
Alignment:
Q  238 ttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctg 337  Q
    ||||||| | |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7591204 ttaattgtacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctg 7591303  T
Q  338 atttggagg 346  Q
    |||||||||    
T  7591304 atttggagg 7591312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 236 - 346
Target Start/End: Original strand, 18296077 - 18296187
Alignment:
Q  236 gcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttc 335  Q
    ||||||||| | |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18296077 gcttaattgtacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccttttc 18296176  T
Q  336 tgatttggagg 346  Q
    |||||||||||    
T  18296177 tgatttggagg 18296187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 233 - 346
Target Start/End: Complemental strand, 7591906 - 7591793
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccct 332  Q
    ||||||||||||||| ||||||  |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  7591906 ttggcttaattgcatctttcactcctatcttttgtcaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcacctcatttttttccccct 7591807  T
Q  333 ttctgatttggagg 346  Q
    ||||||||||||||    
T  7591806 ttctgatttggagg 7591793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 233 - 341
Target Start/End: Complemental strand, 26692876 - 26692768
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccct 332  Q
    |||| ||||||||| ||||| |||||||  |||||||||||||||||||||||||||||  |||||||||||||||||||| ||| ||  ||||||||||    
T  26692876 ttggtttaattgcacttttcccctctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccct 26692777  T
Q  333 ttctgattt 341  Q
    |||||||||    
T  26692776 ttctgattt 26692768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 235 - 341
Target Start/End: Original strand, 30190923 - 30191030
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatcttttt-ccccctt 333  Q
    |||||||||||| ||||| || ||||||||||||||||||||||||||||||||| | |||||    ||||||||||||||||||||||||| |||||||    
T  30190923 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgccccctt 30191022  T
Q  334 tctgattt 341  Q
    ||||||||    
T  30191023 tctgattt 30191030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 238 - 341
Target Start/End: Original strand, 8851151 - 8851254
Alignment:
Q  238 ttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctg 337  Q
    ||||||||| ||||| || ||||  |||||||||||||||||||||||||||||  |||||||||||||||||||| ||| ||  |||||||||||||||    
T  8851151 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctg 8851250  T
Q  338 attt 341  Q
    ||||    
T  8851251 attt 8851254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 234 - 341
Target Start/End: Complemental strand, 38490895 - 38490789
Alignment:
Q  234 tggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctt 333  Q
    ||||||||||||| ||| | || ||||  ||| ||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||||||||||    
T  38490895 tggcttaattgcactttcctcc-ctatagtttaccaattgtgcgattttgcatctcatggttttaaacgagcgattttgcaccccatctttttccccctt 38490797  T
Q  334 tctgattt 341  Q
    | ||||||    
T  38490796 tatgattt 38490789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 235 - 335
Target Start/End: Original strand, 24832331 - 24832432
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatcttttt-ccccctt 333  Q
    |||||||||||| ||||| || ||||||||||| ||||||||||||||||||||||| |||||    ||||||||||||||||||||||||| |||||||    
T  24832331 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccatctttttttttgagcgattttgcaccccatctttttgccccctt 24832430  T
Q  334 tc 335  Q
    ||    
T  24832431 tc 24832432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 233 - 341
Target Start/End: Complemental strand, 7664729 - 7664621
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccct 332  Q
    |||||||||||||| |||||  | ||||  |||| ||||||||||||||||||||||||  |||||||||||||||||||| ||| ||  ||||||||||    
T  7664729 ttggcttaattgcacttttcctccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccct 7664630  T
Q  333 ttctgattt 341  Q
    |||||||||    
T  7664629 ttctgattt 7664621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 235 - 341
Target Start/End: Complemental strand, 20347518 - 20347411
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatcttttt-ccccctt 333  Q
    |||||||||||| ||||| || ||||||||||||||||||||||||||||||||| | |||||    ||| |||||||||||||||||||||  ||||||    
T  20347518 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctctttttttttgagggattttgcaccccatctttttgtcccctt 20347419  T
Q  334 tctgattt 341  Q
    ||||||||    
T  20347418 tctgattt 20347411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 235 - 341
Target Start/End: Original strand, 7664248 - 7664354
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||||| ||||| || ||||  |||  ||||||||||||||||||||||||  |||||||||||||||||||| ||| ||  ||||||||||||    
T  7664248 ggcttaattgcacttttcccccctatagtttatcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctataattttcccccttt 7664347  T
Q  335 ctgattt 341  Q
    |||||||    
T  7664348 ctgattt 7664354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 235 - 341
Target Start/End: Complemental strand, 41790966 - 41790860
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||||| ||||| || |||| ||||||||||||||||||||||| ||||||  ||| |||||||||||||||| ||| ||  ||||||| ||||    
T  41790966 ggcttaattgcacttttcccccctatattttgccaattgtgcgattttgccccccattgtttaaaacgagcgattttgccccctatagttttccctcttt 41790867  T
Q  335 ctgattt 341  Q
    |||||||    
T  41790866 ctgattt 41790860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 238 - 341
Target Start/End: Complemental strand, 40469780 - 40469676
Alignment:
Q  238 ttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatcttttt-ccccctttct 336  Q
    ||||||||| ||||  || ||||||||||| ||||||||||||||||||||| | |||||    ||||||||||||||||||||||||| ||||||||||    
T  40469780 ttaattgcactttttccccctatcttttgctaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgccccctttct 40469681  T
Q  337 gattt 341  Q
    |||||    
T  40469680 gattt 40469676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 235 - 341
Target Start/End: Complemental strand, 6171510 - 6171404
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatcttttt-ccccctt 333  Q
    |||||||||||| ||||| || ||||||||||||||||||| ||||||||||||| | |||||    |||| |||||||||||||||||||| |||||||    
T  6171510 ggcttaattgcacttttcccccctatcttttgccaattgtgggattttgcacccc-tctttttttttgagcaattttgcaccccatctttttgccccctt 6171412  T
Q  334 tctgattt 341  Q
    ||||||||    
T  6171411 tctgattt 6171404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 238 - 341
Target Start/End: Original strand, 26692399 - 26692502
Alignment:
Q  238 ttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctg 337  Q
    ||||||||| ||||  |||||||  |||| ||||||||||||||||||||||||  |||||||||||||||||||| ||| ||  |||| ||||||||||    
T  26692399 ttaattgcactttttccctctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgctccctataatttttcccctttctg 26692498  T
Q  338 attt 341  Q
    ||||    
T  26692499 attt 26692502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 235 - 341
Target Start/End: Complemental strand, 8851636 - 8851531
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||||| ||||| || ||||  |||| ||||||||||||||||||||||||  |||||||||||||||||||| ||| ||  |||| |||||||    
T  8851636 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagtttt-ccccttt 8851538  T
Q  335 ctgattt 341  Q
    |||||||    
T  8851537 ctgattt 8851531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 263 - 341
Target Start/End: Complemental strand, 16911295 - 16911217
Alignment:
Q  263 tttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctgattt 341  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||  ||| ||  |||||||||||||||||||    
T  16911295 tttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgtcccctatagttttccccctttctgattt 16911217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 263 - 341
Target Start/End: Complemental strand, 17851428 - 17851350
Alignment:
Q  263 tttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctgattt 341  Q
    |||||||||||||||||||| ||||||||  |||||||||||||||||||| ||| ||  |||||||||||||||||||    
T  17851428 tttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctatagttttccccctttctgattt 17851350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 235 - 297
Target Start/End: Complemental strand, 18296747 - 18296685
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgttttt 297  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  18296747 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatcttttt 18296685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 235 - 313
Target Start/End: Original strand, 37720204 - 37720282
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 313  Q
    |||||||||||| ||||| || ||||  |||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  37720204 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgc 37720282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 233 - 325
Target Start/End: Complemental strand, 11883982 - 11883890
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttt 325  Q
    |||||||||||||| ||||| || ||||||||||| ||||||||||||||||||||| | |||||    |||||||||||||| |||||||||    
T  11883982 ttggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccctctttttttttgagcgattttgcactccatctttt 11883890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 233 - 341
Target Start/End: Original strand, 17850976 - 17851083
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccct 332  Q
    |||||||||||||| ||||| || ||||  |||||||||||||||||||||||||||||  |||| ||||||||||||||| ||| ||   |||||||||    
T  17850976 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagtttt-aacgagcgattttgccccctatagatttccccct 17851074  T
Q  333 ttctgattt 341  Q
    || ||||||    
T  17851075 ttatgattt 17851083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 235 - 342
Target Start/End: Original strand, 5378661 - 5378768
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||||| ||||| || ||||  ||||||||||||||||||||||||||| |  ||| ||||| |||||||||| ||| || |||| ||| ||||    
T  5378661 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccgtagtttaaaacgtgcgattttgccccctatattttaccctcttt 5378760  T
Q  335 ctgatttg 342  Q
    ||||||||    
T  5378761 ctgatttg 5378768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 235 - 342
Target Start/End: Complemental strand, 5380013 - 5379906
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||||| ||||| || ||||  ||| ||||||||||||||||||||||| |  ||| ||||| |||||||||| ||| || |||| ||||||||    
T  5380013 ggcttaattgcacttttcccccctatagtttaccaattgtgcgattttgcaccccgtagtttaaaacgtgcgattttgccccctatattttacccccttt 5379914  T
Q  335 ctgatttg 342  Q
    ||||||||    
T  5379913 ctgatttg 5379906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 235 - 341
Target Start/End: Original strand, 11883623 - 11883730
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatcttttt-ccccctt 333  Q
    |||||||||||| ||||| || ||||||||||| ||||||||||||||||||||| | |||||    |||| |||||||||| ||||||||| |||||||    
T  11883623 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccctctttttttttgagcaattttgcacctcatctttttgccccctt 11883722  T
Q  334 tctgattt 341  Q
    | ||||||    
T  11883723 tatgattt 11883730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 234 - 341
Target Start/End: Original strand, 16910826 - 16910933
Alignment:
Q  234 tggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctt 333  Q
    ||||||||||||| ||||| ||  | |  |||||||||||||||||||||||||||||  |||||||||||||||||||| | | ||  |||||| ||||    
T  16910826 tggcttaattgcacttttcccccatgtagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccctctatagttttcctcctt 16910925  T
Q  334 tctgattt 341  Q
    ||||||||    
T  16910926 tctgattt 16910933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 238 - 341
Target Start/End: Original strand, 41790494 - 41790596
Alignment:
Q  238 ttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctg 337  Q
    ||||||||||||||| || ||||  |||| ||||||||||||||||||||||||  ||| |||||||||||||||| ||| ||  |||||| ||||||||    
T  41790494 ttaattgcatttttcccc-ctatagtttgtcaattgtgcgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcctcctttctg 41790592  T
Q  338 attt 341  Q
    ||||    
T  41790593 attt 41790596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 263 - 341
Target Start/End: Original strand, 7979593 - 7979671
Alignment:
Q  263 tttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctgattt 341  Q
    |||| ||||||||||||||||||||||||  |||||||||||||||||||| ||| ||  ||||||| |||||||||||    
T  7979593 tttgacaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccctctttctgattt 7979671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 263 - 341
Target Start/End: Complemental strand, 19141875 - 19141797
Alignment:
Q  263 tttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctgattt 341  Q
    ||||||||||||||||||||||| |||||  ||| |||||||||||||||| ||| ||  |||||||||||||||||||    
T  19141875 tttgccaattgtgcgattttgcatcccatagtttaaaacgagcgattttgccccctatagttttccccctttctgattt 19141797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 233 - 341
Target Start/End: Complemental strand, 26737837 - 26737728
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccat-ctttttccccc 331  Q
    |||||||||||||| |||||||| ||||||||||| || ||||||||||||||||||   |||||    ||| |||||| |||||||| ||||| |||||    
T  26737837 ttggcttaattgcacttttcacccctatcttttgctaactgtgcgattttgcacccctcttttttttttgagagattttacaccccatccttttgccccc 26737738  T
Q  332 tttctgattt 341  Q
    ||||||||||    
T  26737737 tttctgattt 26737728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 257 - 341
Target Start/End: Complemental strand, 32673175 - 32673090
Alignment:
Q  257 ctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttt-tccccctttctgattt 341  Q
    ||||||||||||||||||||||||||||||||| | |||||    ||||||||||||||||||||||||  ||| |||||||||||    
T  32673175 ctatcttttgccaattgtgcgattttgcaccccctatttttttttgagcgattttgcaccccatcttttcgccctctttctgattt 32673090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 233 - 325
Target Start/End: Original strand, 40469425 - 40469517
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttt 325  Q
    |||||||||||| ||||||| |  ||||||||||| ||||||||||||||||||||| | |||||    |||||||||||||||| |||||||    
T  40469425 ttggcttaattgtatttttccctcctatcttttgctaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccctatctttt 40469517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 242 - 341
Target Start/End: Original strand, 6324924 - 6325023
Alignment:
Q  242 ttgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctgattt 341  Q
    ||||| ||||| || ||||  ||||||||||||||||||||||| |||||  |||||||||||||||||||  ||| ||  ||||||| |||||||||||    
T  6324924 ttgcacttttcccccctatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgtcccctatagttttccctctttctgattt 6325023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 304 - 373
Target Start/End: Complemental strand, 18296707 - 18296639
Alignment:
Q  304 gcgattttgcaccccatctttttccccctttctgatttggaggnnnnnnnatgtgttttagtgatgatgt 373  Q
    |||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||    
T  18296707 gcgattttgcaccccatctttttccccctttctgatttggagg-ccccccatgtgttttagtgatgatgt 18296639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 263 - 341
Target Start/End: Original strand, 5793475 - 5793553
Alignment:
Q  263 tttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctgattt 341  Q
    ||||||||||||||||||||||| || ||  |||||||||||||||||||| ||| ||  ||||||| |||||||||||    
T  5793475 tttgccaattgtgcgattttgcatcctatagttttaaacgagcgattttgccccctatagttttccctctttctgattt 5793553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 235 - 341
Target Start/End: Complemental strand, 7980056 - 7979951
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||||| ||||  |||||||  ||||| |||||||||||||||||||||||  ||||||||||||||||| ||  || ||  |||| |||||||    
T  7980056 ggcttaattgcacttttt-cctctatagtttgctaattgtgcgattttgcaccccatagttttaaacgagcgatttcgccgcctatagtttttccccttt 7979958  T
Q  335 ctgattt 341  Q
    |||||||    
T  7979957 ctgattt 7979951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 237 - 338
Target Start/End: Complemental strand, 6325399 - 6325298
Alignment:
Q  237 cttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttct 336  Q
    |||||||||| ||||| ||  |||  ||||||||||||||||||||||||| |||  | |||||||||||||||||| ||| ||  |||||||| |||||    
T  6325399 cttaattgcacttttcccccatatagtttgccaattgtgcgattttgcacctcatagtattaaacgagcgattttgccccctatagttttccccatttct 6325300  T
Q  337 ga 338  Q
    ||    
T  6325299 ga 6325298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 233 - 325
Target Start/End: Complemental strand, 30191281 - 30191189
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttt 325  Q
    |||||||||||||| ||||| || |||||||||   ||||||||||||||||||||| | |||||    |||||||||||||||| |||||||    
T  30191281 ttggcttaattgcacttttcccccctatcttttattaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccctatctttt 30191189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 263 - 313
Target Start/End: Complemental strand, 18750152 - 18750102
Alignment:
Q  263 tttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 313  Q
    |||| ||||||||||||||||||||||||  ||||||||||||||||||||    
T  18750152 tttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgc 18750102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 235 - 325
Target Start/End: Original strand, 20347163 - 20347252
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttt 325  Q
    ||||||||| || ||||| |||||||||||||  ||||||||||||||||||||| | |||||    |||||||||||||||| |||||||    
T  20347163 ggcttaattacacttttcccctctatcttttgttaattgtgcgattttgcacccc-tctttttttttgagcgattttgcaccctatctttt 20347252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 296
Target Start/End: Complemental strand, 18055372 - 18055309
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttt 296  Q
    |||| ||||||||| ||||  |||||| |||||| |||||||||||||||||||||||| ||||    
T  18055372 ttggtttaattgcactttttccctctaccttttgtcaattgtgcgattttgcaccccatctttt 18055309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 237 - 339
Target Start/End: Original strand, 19141446 - 19141547
Alignment:
Q  237 cttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttct 336  Q
    |||||||||| ||||  || ||||  |||||||||||||| ||||||||||||||  |||||||||||||| ||| | ||| ||  |||||||||||| |    
T  19141446 cttaattgcactttttccccctatagtttgccaattgtgc-attttgcaccccatagttttaaacgagcgaatttaccccctatagttttccccctttat 19141544  T
Q  337 gat 339  Q
    |||    
T  19141545 gat 19141547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 287
Target Start/End: Original strand, 29230282 - 29230334
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcacc 287  Q
    |||||||||||| |||||  |||||||||||| |||||||| |||||||||||    
T  29230282 ggcttaattgcacttttcctctctatcttttgtcaattgtgtgattttgcacc 29230334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 235 - 289
Target Start/End: Original strand, 26737482 - 26737534
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcacccc 289  Q
    |||||||||||| ||||| |||  ||||||||| |||||||||||||||||||||    
T  26737482 ggcttaattgcacttttctcct--atcttttgctaattgtgcgattttgcacccc 26737534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 287
Target Start/End: Original strand, 6171154 - 6171207
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcacc 287  Q
    |||||||||||||| ||||| || ||||||||||  |||||||||||||||||||    
T  6171154 ttggcttaattgcacttttcccc-ctatcttttgttaattgtgcgattttgcacc 6171207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 287
Target Start/End: Original strand, 29343584 - 29343633
Alignment:
Q  238 ttaattgcatttttcacctctatcttttgccaattgtgcgattttgcacc 287  Q
    ||||||||| |||||  |||||||||||| |||||||| |||||||||||    
T  29343584 ttaattgcacttttcctctctatcttttgtcaattgtgtgattttgcacc 29343633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 287
Target Start/End: Original strand, 40221308 - 40221364
Alignment:
Q  230 aagttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcacc 287  Q
    |||||||||||||||||  |||| || ||||||||||| |||||| ||||||||||||    
T  40221308 aagttggcttaattgcacctttcccc-ctatcttttgctaattgttcgattttgcacc 40221364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 287
Target Start/End: Complemental strand, 6495775 - 6495723
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcacc 287  Q
    |||||||||||| |||||  | ||||||||||  |||||||||||||||||||    
T  6495775 ggcttaattgcacttttcctccctatcttttgtgaattgtgcgattttgcacc 6495723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 287
Target Start/End: Complemental strand, 17346088 - 17346037
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcacc 287  Q
    |||||||||||| ||||  ||| |||||||||| |||||||||||||||||||    
T  17346088 ggcttaattgcacttttt-cctttatcttttgctaattgtgcgattttgcacc 17346037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 325
Target Start/End: Original strand, 32672840 - 32672932
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttt 325  Q
    |||||||||||||| ||||   |  |||||||||  ||||||||||||||||||||  | |||||    |||||||||||||||| |||||||    
T  32672840 ttggcttaattgcacttttgttccttatcttttgttaattgtgcgattttgcaccctctctttttttttgagcgattttgcaccctatctttt 32672932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 104; Significance: 9e-52; HSPs: 65)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 235 - 346
Target Start/End: Original strand, 49284409 - 49284520
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49284409 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 49284508  T
Q  335 ctgatttggagg 346  Q
    ||||||||||||    
T  49284509 ctgatttggagg 49284520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 233 - 346
Target Start/End: Original strand, 6002235 - 6002348
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccct 332  Q
    |||||||||||||| |||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6002235 ttggcttaattgcacttttcacccctatcttttgtcaattgtgtgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccct 6002334  T
Q  333 ttctgatttggagg 346  Q
    ||||||||||||||    
T  6002335 ttctgatttggagg 6002348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 237 - 373
Target Start/End: Complemental strand, 6002946 - 6002810
Alignment:
Q  237 cttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttct 336  Q
    |||||||||| |||||| | |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  6002946 cttaattgcacttttcatccctatcttttcgcaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcacctcatctttttccccctttct 6002847  T
Q  337 gatttggaggnnnnnnnatgtgttttagtgatgatgt 373  Q
    ||||||||||       ||||||||||||||||||||    
T  6002846 gatttggaggcccccccatgtgttttagtgatgatgt 6002810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 258 - 373
Target Start/End: Complemental strand, 49285086 - 49284972
Alignment:
Q  258 tatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctgatttggaggnnnnnnnatgt 357  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||       ||||    
T  49285086 tatcttttgccaattgtgcgattttgcaccccatgtttttaaacaagcgattttgcaccccatctttttccccctttctgatttggagg-ccccccatgt 49284988  T
Q  358 gttttagtgatgatgt 373  Q
    ||||||||||||||||    
T  49284987 gttttagtgatgatgt 49284972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 235 - 341
Target Start/End: Complemental strand, 39692054 - 39691948
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||||| ||||| || |||| ||||| ||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||    
T  39692054 ggcttaattgcacttttcccccctatattttgtcaattgtgcgattttgcaccccatgtttttaaacgtgtgattttgcaccctatctttttcccccttt 39691955  T
Q  335 ctgattt 341  Q
    |||||||    
T  39691954 ctgattt 39691948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 233 - 341
Target Start/End: Original strand, 9347124 - 9347232
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccct 332  Q
    |||||||||||||| ||||| || ||||  |||||||||||||||||||||||||||||  |||||||||||||||||||| ||| ||  ||||||||||    
T  9347124 ttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccct 9347223  T
Q  333 ttctgattt 341  Q
    |||||||||    
T  9347224 ttctgattt 9347232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 235 - 341
Target Start/End: Original strand, 47955306 - 47955413
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatcttttt-ccccctt 333  Q
    |||||||||||| ||||| || ||||||||||||||||||||||||||||||||| | |||||    ||||||||||||||||||||||||| |||||||    
T  47955306 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgccccctt 47955405  T
Q  334 tctgattt 341  Q
    ||||||||    
T  47955406 tctgattt 47955413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 233 - 341
Target Start/End: Original strand, 27172114 - 27172221
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccct 332  Q
    |||||||||||||| ||||| || ||||  |||||||||||||||||||||||||||||  |||||||||||||||||||| ||| ||  ||||||||||    
T  27172114 ttggcttaattgcacttttcccc-ctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccct 27172212  T
Q  333 ttctgattt 341  Q
    |||||||||    
T  27172213 ttctgattt 27172221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 233 - 341
Target Start/End: Complemental strand, 48105172 - 48105064
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccct 332  Q
    |||||||||||||| ||||| ||  |||  |||||||||||||||||||||||||||||  |||||||||||||||||||| ||| ||  ||||||||||    
T  48105172 ttggcttaattgcacttttcccccttatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccct 48105073  T
Q  333 ttctgattt 341  Q
    |||||||||    
T  48105072 ttctgattt 48105064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 235 - 341
Target Start/End: Complemental strand, 32163097 - 32162991
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||||| ||||| || ||||  |||||||||||||||||||||||||||||  |||||||||||||||||||| ||  ||  ||||||||||||    
T  32163097 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccttatagttttcccccttt 32162998  T
Q  335 ctgattt 341  Q
    |||||||    
T  32162997 ctgattt 32162991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 235 - 341
Target Start/End: Original strand, 44911025 - 44911131
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||||| ||| | || |||| ||||||||||||||||||||||||||||||  ||| |||||||||||||||| ||| ||  ||||||||||||    
T  44911025 ggcttaattgcactttccccccctatattttgccaattgtgcgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 44911124  T
Q  335 ctgattt 341  Q
    |||||||    
T  44911125 ctgattt 44911131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 232 - 341
Target Start/End: Complemental strand, 50430138 - 50430029
Alignment:
Q  232 gttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccc 331  Q
    ||||| ||||||||| ||||| || ||||  |||||||||||||||||||||||||||||  |||||||||||||||||||| ||| ||  ||||| |||    
T  50430138 gttggtttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttctccc 50430039  T
Q  332 tttctgattt 341  Q
    ||||||||||    
T  50430038 tttctgattt 50430029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 233 - 341
Target Start/End: Original strand, 13918444 - 13918552
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccct 332  Q
    |||||||||||||| ||||  |  ||||  |||||||||||||||||||||||||||||  |||||||||||||||||||| ||| ||  ||||||||||    
T  13918444 ttggcttaattgcactttttcctcctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccct 13918543  T
Q  333 ttctgattt 341  Q
    |||||||||    
T  13918544 ttctgattt 13918552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 233 - 341
Target Start/End: Original strand, 26814692 - 26814800
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccct 332  Q
    |||||||||||||| |||||  | ||||  |||| ||||||||||||||||||||||||  |||||||||||||||||||| ||| ||  ||||||||||    
T  26814692 ttggcttaattgcacttttcctccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccct 26814791  T
Q  333 ttctgattt 341  Q
    |||||||||    
T  26814792 ttctgattt 26814800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 237 - 341
Target Start/End: Complemental strand, 50526524 - 50526420
Alignment:
Q  237 cttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttct 336  Q
    |||||||||| ||||  || ||||  |||||||||||||||||||||||||||||  |||||||||||||||||||| ||| ||  ||||||||||||||    
T  50526524 cttaattgcactttttccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttct 50526425  T
Q  337 gattt 341  Q
    |||||    
T  50526424 gattt 50526420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 238 - 341
Target Start/End: Original strand, 46823846 - 46823949
Alignment:
Q  238 ttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctg 337  Q
    ||||||||| ||||| || ||||  |||||||||||||||||||||||| ||||  |||||||||||||||||||| ||| ||  |||||||||||||||    
T  46823846 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcactccatagttttaaacgagcgattttgccccctatagttttccccctttctg 46823945  T
Q  338 attt 341  Q
    ||||    
T  46823946 attt 46823949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 238 - 341
Target Start/End: Original strand, 48104681 - 48104784
Alignment:
Q  238 ttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctg 337  Q
    ||||||||| ||||| || ||||  |||| ||||||||||||||||||||||||  |||||||||||||||||||| ||| ||  |||||||||||||||    
T  48104681 ttaattgcacttttcccccctatagtttggcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctg 48104780  T
Q  338 attt 341  Q
    ||||    
T  48104781 attt 48104784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 235 - 341
Target Start/End: Original strand, 20480168 - 20480273
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||||| ||||| || ||||  |||| ||||||||||||||||||||||||  |||||||||||||||||||| ||| ||  ||||||||||||    
T  20480168 ggcttaattgcacttttcccc-ctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 20480266  T
Q  335 ctgattt 341  Q
    |||||||    
T  20480267 ctgattt 20480273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 235 - 341
Target Start/End: Complemental strand, 26815173 - 26815067
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||||| ||||| || ||||  |||  ||||||||||||||||||||||||  |||||||||||||||||||| ||| ||  ||||||||||||    
T  26815173 ggcttaattgcacttttcccccctatagtttatcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctataattttcccccttt 26815074  T
Q  335 ctgattt 341  Q
    |||||||    
T  26815073 ctgattt 26815067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 235 - 341
Target Start/End: Original strand, 28633720 - 28633826
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||||| ||||| ||  |||  |||||||||||| ||||||||||||||||  |||||||||||||||||||| ||| ||  ||||||||||||    
T  28633720 ggcttaattgcacttttcccccttatagtttgccaattgtacgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 28633819  T
Q  335 ctgattt 341  Q
    |||||||    
T  28633820 ctgattt 28633826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 233 - 341
Target Start/End: Complemental strand, 6703950 - 6703842
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccct 332  Q
    |||||||||||||| ||||| || ||||  |||||||||||||| ||||||||||||||  ||||||||||||||||||||  |  ||  ||||||||||    
T  6703950 ttggcttaattgcacttttctcccctatagtttgccaattgtgcaattttgcaccccatagttttaaacgagcgattttgcctcatatagttttccccct 6703851  T
Q  333 ttctgattt 341  Q
    |||||||||    
T  6703850 ttctgattt 6703842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 233 - 297
Target Start/End: Original strand, 48190769 - 48190833
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgttttt 297  Q
    |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  48190769 ttggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatcttttt 48190833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 233 - 341
Target Start/End: Complemental strand, 50615676 - 50615569
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccct 332  Q
    |||||||||||||| ||||| || ||||  |||| ||||||||||||||||||||||||  ||||||| |||||||||||| ||| ||  ||||||||||    
T  50615676 ttggcttaattgcacttttcccc-ctatagtttgtcaattgtgcgattttgcaccccatagttttaaatgagcgattttgccccctatagttttccccct 50615578  T
Q  333 ttctgattt 341  Q
    |||||||||    
T  50615577 ttctgattt 50615569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 233 - 341
Target Start/End: Complemental strand, 50623504 - 50623397
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccct 332  Q
    |||||||||||||| ||||| || ||||  |||| ||||||||||||||||||||||||  ||||||| |||||||||||| ||| ||  ||||||||||    
T  50623504 ttggcttaattgcacttttcccc-ctatagtttgtcaattgtgcgattttgcaccccatagttttaaatgagcgattttgccccctatagttttccccct 50623406  T
Q  333 ttctgattt 341  Q
    |||||||||    
T  50623405 ttctgattt 50623397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 238 - 341
Target Start/End: Complemental strand, 28634208 - 28634105
Alignment:
Q  238 ttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctg 337  Q
    ||||||||| ||||| || ||||  |||| ||||||||||||||||||||||||  |||||||||| ||||||||| ||| ||  |||||||||||||||    
T  28634208 ttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgatcgattttgccccctatagttttccccctttctg 28634109  T
Q  338 attt 341  Q
    ||||    
T  28634108 attt 28634105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 235 - 341
Target Start/End: Complemental strand, 999578 - 999473
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||||| ||||| || ||||   |||||||||||||||||||||| |||||  |||||||||||||||||||| ||| ||  ||||||||||||    
T  999578 ggcttaattgcacttttcccc-ctatagattgccaattgtgcgattttgcaacccatagttttaaacgagcgattttgccccctatagttttcccccttt 999480  T
Q  335 ctgattt 341  Q
    |||||||    
T  999479 ctgattt 999473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 263 - 341
Target Start/End: Complemental strand, 9347577 - 9347499
Alignment:
Q  263 tttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctgattt 341  Q
    |||||||||||||| ||||||||||||||  |||||||||||||||||||| ||| ||  |||||||||||||||||||    
T  9347577 tttgccaattgtgcaattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctgattt 9347499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 235 - 341
Target Start/End: Complemental strand, 27172595 - 27172490
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||||| ||||| || || |  ||||||||||||||||||||||| |||||  |||||||||||||||||||| ||| ||  ||||||||||||    
T  27172595 ggcttaattgcacttttcccccctgtactttgccaattgtgcgattttgcatcccattgttttaaacgagcgattttgc-ccctatagttttcccccttt 27172497  T
Q  335 ctgattt 341  Q
    |||||||    
T  27172496 ctgattt 27172490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 233 - 341
Target Start/End: Original strand, 21687023 - 21687131
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccct 332  Q
    |||||||||||||| ||||| || ||||  |||| ||||||||  ||||||||||||||  |||||||||||||||||||| ||| ||  |||||| |||    
T  21687023 ttggcttaattgcacttttcccccctatagtttgtcaattgtgtaattttgcaccccatagttttaaacgagcgattttgccccctatagttttcctcct 21687122  T
Q  333 ttctgattt 341  Q
    |||||||||    
T  21687123 ttctgattt 21687131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 238 - 341
Target Start/End: Complemental strand, 22149750 - 22149649
Alignment:
Q  238 ttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctg 337  Q
    ||||||||| ||||| || ||||||||||| ||||||||||||||||||| | | |||||     |||||||||||||||||||||||| ||||||||||    
T  22149750 ttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacctcctttttttttt--agcgattttgcaccccatctttttgcccctttctg 22149653  T
Q  338 attt 341  Q
    ||||    
T  22149652 attt 22149649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 233 - 341
Target Start/End: Complemental strand, 49318221 - 49318114
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccct 332  Q
    |||||||||||||| ||| | || ||||  ||||||||||||||||||||||| |||||  ||| |||||||||||||||| ||| ||  ||||||||||    
T  49318221 ttggcttaattgcactttccccc-ctatagtttgccaattgtgcgattttgcatcccatagtttaaaacgagcgattttgccccctatagttttccccct 49318123  T
Q  333 ttctgattt 341  Q
    |||||||||    
T  49318122 ttctgattt 49318114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 238 - 341
Target Start/End: Original strand, 42611188 - 42611291
Alignment:
Q  238 ttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctg 337  Q
    ||||||||| ||||| ||  |||  ||||||||||||||||||||||||| |||  ||||||||||||||||||||  || ||  |||||||||||||||    
T  42611188 ttaattgcacttttcccccttatagtttgccaattgtgcgattttgcacctcatagttttaaacgagcgattttgcctcctatagttttccccctttctg 42611287  T
Q  338 attt 341  Q
    ||||    
T  42611288 attt 42611291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 238 - 341
Target Start/End: Complemental strand, 44911488 - 44911385
Alignment:
Q  238 ttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctg 337  Q
    ||||||||||||||  || ||||  |||||||||||||||||||||||||| ||  ||| |||||||||||||||| ||| ||  |||||| ||||||||    
T  44911488 ttaattgcattttttccccctatagtttgccaattgtgcgattttgcaccctattgtttaaaacgagcgattttgccccctatagttttcctcctttctg 44911389  T
Q  338 attt 341  Q
    ||||    
T  44911388 attt 44911385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 234 - 341
Target Start/End: Original strand, 49317751 - 49317857
Alignment:
Q  234 tggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctt 333  Q
    ||||||||||||| ||||| || ||||  |||||||||||||| |||||||| |||||  |||||||||||||||||| | ||| ||  |||||||||||    
T  49317751 tggcttaattgcacttttcccc-ctatagtttgccaattgtgcaattttgcatcccatagttttaaacgagcgattttaccccctatagttttccccctt 49317849  T
Q  334 tctgattt 341  Q
    ||||||||    
T  49317850 tctgattt 49317857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 235 - 297
Target Start/End: Complemental strand, 8109047 - 8108985
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgttttt 297  Q
    |||||||||||| ||||| || ||||||||||||||||||||||||||||||||||| |||||    
T  8109047 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccatcttttt 8108985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 263 - 341
Target Start/End: Complemental strand, 46824304 - 46824226
Alignment:
Q  263 tttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctgattt 341  Q
    |||||||||||||| ||||||||||||||  |||||||||||||||||||| ||| ||  |||||||||||| ||||||    
T  46824304 tttgccaattgtgcaattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttttgattt 46824226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 233 - 341
Target Start/End: Complemental strand, 20371408 - 20371300
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgca-ccccatgtttttaaacgagcgattttgcaccccatctttttccccc 331  Q
    |||||||||||||| ||||| || ||||  ||||||||||||||||||||||| ||||||  |||||||||||| ||||||| ||| ||  ||| |||||    
T  20371408 ttggcttaattgcacttttcccc-ctatagtttgccaattgtgcgattttgcacccccatagttttaaacgagcaattttgccccctatagtttaccccc 20371310  T
Q  332 tttctgattt 341  Q
    ||||||||||    
T  20371309 tttctgattt 20371300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 235 - 296
Target Start/End: Complemental strand, 48191409 - 48191348
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttt 296  Q
    |||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||| ||||    
T  48191409 ggcttaattgcacttttcacccctatcttttgccaatggtgcgattttgcaccccatctttt 48191348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 234 - 341
Target Start/End: Original strand, 41082908 - 41083015
Alignment:
Q  234 tggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatcttttt-ccccct 332  Q
    ||||||||||| | ||||  || ||||||||||||||||||||||||||||| ||| | |||||     |||||||||||||||||||||||| ||||||    
T  41082908 tggcttaattgtactttttccccctatcttttgccaattgtgcgattttgcatcccctcttttt-ttttagcgattttgcaccccatctttttgccccct 41083006  T
Q  333 ttctgattt 341  Q
    |||||||||    
T  41083007 ttctgattt 41083015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 233 - 341
Target Start/End: Complemental strand, 42611670 - 42611562
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccct 332  Q
    |||| ||||||||| ||||| || ||||  |||| |||||||||||||||||||| |||  |||||||| ||||||||||| ||| ||  |||| |||||    
T  42611670 ttggtttaattgcacttttctcccctatagtttgtcaattgtgcgattttgcacctcatagttttaaacaagcgattttgccccctatagtttttcccct 42611571  T
Q  333 ttctgattt 341  Q
    |||||||||    
T  42611570 ttctgattt 42611562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 235 - 342
Target Start/End: Complemental strand, 19008804 - 19008697
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||||| ||||| || ||||  |||  ||||||||||||||||||||||||  ||| ||||| || ||||||| ||| ||  ||||||||||||    
T  19008804 ggcttaattgcacttttcccccctatagtttcgcaattgtgcgattttgcaccccatagtttaaaacgtgcaattttgccccctataattttcccccttt 19008705  T
Q  335 ctgatttg 342  Q
    ||||||||    
T  19008704 ctgatttg 19008697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 235 - 325
Target Start/End: Complemental strand, 31848246 - 31848158
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttt 325  Q
    |||||||||||| ||||| || ||||||||||  |||||| |||||||||||||| | |||||   |||||||||||||||||||||||||    
T  31848246 ggcttaattgcacttttctcccctatcttttgttaattgtacgattttgcaccccctcttttt--tcgagcgattttgcaccccatctttt 31848158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 235 - 341
Target Start/End: Original strand, 33085671 - 33085775
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||| | |||||  | |||| ||||| |||||||  |||||||||||||||||||  |||||| |||||||||||| |||| |||||| |||||    
T  33085671 ggcttaattgtacttttccaccctatattttgtcaattgtttgattttgcaccccatgttt--aaacgaacgattttgcacctcatccttttcctccttt 33085768  T
Q  335 ctgattt 341  Q
    |||||||    
T  33085769 ctgattt 33085775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 235 - 341
Target Start/End: Complemental strand, 4692487 - 4692381
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||||| ||||  || ||||  |||||||||||||| ||||||||||||||  |||||||||||||||||| |  || ||  |||| |||||||    
T  4692487 ggcttaattgcactttttccccctatagtttgccaattgtgcaattttgcaccccatagttttaaacgagcgattttacctcctatagtttttccccttt 4692388  T
Q  335 ctgattt 341  Q
    |||||||    
T  4692387 ctgattt 4692381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 267 - 341
Target Start/End: Original strand, 6703492 - 6703566
Alignment:
Q  267 ccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctgattt 341  Q
    ||||||||||||||||||||| |||  |||||||||||||||||||| ||| ||  |||||||| ||||||||||    
T  6703492 ccaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccctatagttttccccttttctgattt 6703566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 235 - 341
Target Start/End: Original strand, 50429656 - 50429762
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||| | ||||| ||| |||  ||||| ||||||||||||||||||| |||  |||||||||||||||||||| ||| ||  |||||  |||||    
T  50429656 ggcttaattgtacttttcccctttataatttgctaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccctatagttttcatccttt 50429755  T
Q  335 ctgattt 341  Q
    |||||||    
T  50429756 ctgattt 50429762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 236 - 341
Target Start/End: Complemental strand, 13918920 - 13918815
Alignment:
Q  236 gcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttc 335  Q
    ||||||||||| |||||  | ||||  ||||||||||||||||||||||||| |||  |||||||||| ||||||||| ||| ||  ||||||||| ||     
T  13918920 gcttaattgcacttttcctccctatagtttgccaattgtgcgattttgcacctcatagttttaaacgaacgattttgccccctatagttttccccccttt 13918821  T
Q  336 tgattt 341  Q
    ||||||    
T  13918820 tgattt 13918815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 237 - 341
Target Start/End: Complemental strand, 17518653 - 17518551
Alignment:
Q  237 cttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatcttttt-ccccctttc 335  Q
    |||||||||| ||||| || ||||||||||||||||||||||||||||||||| | |||||    |||| |||||||| ||||||||||| |||||||||    
T  17518653 cttaattgcacttttcccc-ctatcttttgccaattgtgcgattttgcaccccctcttttt-tttgagcaattttgca-cccatctttttgccccctttc 17518557  T
Q  336 tgattt 341  Q
    ||||||    
T  17518556 tgattt 17518551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 233 - 310
Target Start/End: Complemental strand, 20480667 - 20480591
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattt 310  Q
    |||||||||||||| ||||| || ||||  |||||||||||||||||||||||||| ||  |||||||||||||||||    
T  20480667 ttggcttaattgcacttttcccc-ctatagtttgccaattgtgcgattttgcaccctatagttttaaacgagcgattt 20480591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 230 - 325
Target Start/End: Complemental strand, 47955667 - 47955572
Alignment:
Q  230 aagttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttt 325  Q
    |||| |||||||||||| ||||| || |||||||||   ||||||||||||||||||||| | |||||    |||||||||||||||| |||||||    
T  47955667 aagtaggcttaattgcacttttcccccctatcttttattaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccctatctttt 47955572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 304 - 346
Target Start/End: Original strand, 48190811 - 48190853
Alignment:
Q  304 gcgattttgcaccccatctttttccccctttctgatttggagg 346  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  48190811 gcgattttgcaccccatctttttccccctttctaatttggagg 48190853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 233 - 311
Target Start/End: Complemental strand, 49318498 - 49318421
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgatttt 311  Q
    |||||||||||||||||||| || ||||  |||  |||||||||||||||||| |||||  ||||||||||||||||||    
T  49318498 ttggcttaattgcatttttcccc-ctatagtttatcaattgtgcgattttgcatcccatagttttaaacgagcgatttt 49318421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 262 - 341
Target Start/End: Original strand, 24671283 - 24671360
Alignment:
Q  262 ttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctgattt 341  Q
    ||||||||||||||||||||||||| ||||  ||||||  ||||||||||||||||  | |||| |||||||| ||||||    
T  24671283 ttttgccaattgtgcgattttgcactccatccttttaattgagcgattttgcaccc--ttttttaccccctttttgattt 24671360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 238 - 313
Target Start/End: Original strand, 999115 - 999189
Alignment:
Q  238 ttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 313  Q
    ||||||||| ||||| || ||||  |||| |||||||||||||||||| |||||  ||||||||||||||||||||    
T  999115 ttaattgcacttttcccc-ctatagtttgtcaattgtgcgattttgcatcccatagttttaaacgagcgattttgc 999189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 304 - 373
Target Start/End: Complemental strand, 48191369 - 48191302
Alignment:
Q  304 gcgattttgcaccccatctttttccccctttctgatttggaggnnnnnnnatgtgttttagtgatgatgt 373  Q
    |||||||||||||||||||||| ||||||||||||||||||||       ||||||||||||||||||||    
T  48191369 gcgattttgcaccccatctttt-ccccctttctgatttggagg-ccccccatgtgttttagtgatgatgt 48191302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 289
Target Start/End: Complemental strand, 13589712 - 13589659
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcacccc 289  Q
    |||||||||||| ||||| || ||||||||||| |||||||||||||||||||||    
T  13589712 ggcttaattgcacttttcccc-ctatcttttgctaattgtgcgattttgcacccc 13589659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 325
Target Start/End: Original strand, 17518303 - 17518392
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttt 325  Q
    ||||||||||||  |||| ||| |||||||||  ||||||||||||||||||||| | |||||    |||||||||||||||| |||||||    
T  17518303 ggcttaattgcacctttcccct-tatcttttgttaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccctatctttt 17518392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 263 - 313
Target Start/End: Original strand, 20371066 - 20371116
Alignment:
Q  263 tttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 313  Q
    |||| ||||||||| ||||||||||||||  ||||||||||||||||||||    
T  20371066 tttgtcaattgtgcaattttgcaccccatagttttaaacgagcgattttgc 20371116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 263 - 341
Target Start/End: Complemental strand, 21687493 - 21687415
Alignment:
Q  263 tttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctgattt 341  Q
    ||||||||||||||||||||| ||| |||  |||||||||||||||||| | | |  |  |||||||||||||||||||    
T  21687493 tttgccaattgtgcgattttgtacctcatagttttaaacgagcgatttttccctctgtagttttccccctttctgattt 21687415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 267 - 341
Target Start/End: Complemental strand, 44224141 - 44224067
Alignment:
Q  267 ccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctgattt 341  Q
    ||||||||| ||||||||| |||||  |||||||||||||||||||  ||| ||  |||| ||||||||||||||    
T  44224141 ccaattgtgtgattttgcatcccatagttttaaacgagcgattttgtcccctatagttttacccctttctgattt 44224067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 263 - 341
Target Start/End: Complemental strand, 50949591 - 50949513
Alignment:
Q  263 tttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctgattt 341  Q
    |||| |||||||||||||||||| | |||  ||| |||||||||||||||| ||| ||  |||| ||||||||||||||    
T  50949591 tttgtcaattgtgcgattttgcatctcattgtttaaaacgagcgattttgccccctatagtttttcccctttctgattt 50949513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 305
Target Start/End: Original strand, 32162757 - 32162799
Alignment:
Q  263 tttgccaattgtgcgattttgcaccccatgtttttaaacgagc 305  Q
    |||||||||||||| ||||||||||||||  ||||||||||||    
T  32162757 tttgccaattgtgcaattttgcaccccatagttttaaacgagc 32162799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 313
Target Start/End: Original strand, 47498327 - 47498377
Alignment:
Q  263 tttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 313  Q
    |||||||||||||| |||||||| |||||  |||||||| |||||||||||    
T  47498327 tttgccaattgtgcaattttgcatcccatagttttaaacaagcgattttgc 47498377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 311
Target Start/End: Original strand, 50949191 - 50949237
Alignment:
Q  265 tgccaattgtgcgattttgcaccccatgtttttaaacgagcgatttt 311  Q
    ||||||||||||||||||||||| |||  ||| ||||||||||||||    
T  50949191 tgccaattgtgcgattttgcacctcattgtttaaaacgagcgatttt 50949237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 285
Target Start/End: Original strand, 31848019 - 31848067
Alignment:
Q  238 ttaattgcatttttcacctctatctttt-gccaattgtgcgattttgca 285  Q
    ||||||||| ||||  |||||||||||| ||||||||||||||||||||    
T  31848019 ttaattgcacttttgccctctatctttttgccaattgtgcgattttgca 31848067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 73; Significance: 3e-33; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 233 - 341
Target Start/End: Original strand, 8314011 - 8314119
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccct 332  Q
    |||||||||||||| ||||| || |||| ||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||| ||| ||||||||||    
T  8314011 ttggcttaattgcacttttctcccctatattttgtcaattgtgcgattttgcacccaatgtttttaaacgtgcgattttgcaccctatcattttccccct 8314110  T
Q  333 ttctgattt 341  Q
    |||||||||    
T  8314111 ttctgattt 8314119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 233 - 341
Target Start/End: Complemental strand, 27238956 - 27238848
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccct 332  Q
    |||| ||||||||| ||||| |||||||  |||||||||||||||||||||||||||||  |||||||||||||||||||| ||| ||  ||||||||||    
T  27238956 ttggtttaattgcacttttcccctctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgctccctatagttttccccct 27238857  T
Q  333 ttctgattt 341  Q
    |||||||||    
T  27238856 ttctgattt 27238848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 235 - 341
Target Start/End: Original strand, 48159897 - 48160003
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||||| ||||| || ||||  |||||||||||||||||||||||||||||  |||||||||||||||||||| ||| ||  ||||||||||||    
T  48159897 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 48159996  T
Q  335 ctgattt 341  Q
    |||||||    
T  48159997 ctgattt 48160003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 233 - 341
Target Start/End: Complemental strand, 20969075 - 20968967
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatcttttt-ccccc 331  Q
    |||||||||||||| ||||| || ||||||||||||||||||||||||||||||||| | |||||    ||||||||||||||||||||||||| |||||    
T  20969075 ttggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc-tttttttttttgagcgattttgcaccccatctttttgccccc 20968977  T
Q  332 tttctgattt 341  Q
    ||||||||||    
T  20968976 tttctgattt 20968967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 238 - 342
Target Start/End: Complemental strand, 1928484 - 1928381
Alignment:
Q  238 ttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctg 337  Q
    ||||||||||||| | || ||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||| ||| |||||||| ||||||    
T  1928484 ttaattgcattttcctcc-ctatcttttgccaattgtgcgattttgcaccccatatttttaaacgagtggttttgcaccctatccttttccccttttctg 1928386  T
Q  338 atttg 342  Q
     ||||    
T  1928385 gtttg 1928381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 234 - 341
Target Start/End: Original strand, 10293607 - 10293715
Alignment:
Q  234 tggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatcttttt-ccccct 332  Q
    ||||||||||||||||||  || |||||||||| |||||||||||||||||||||| | |||||    ||||||||||||||||||||||||| ||||||    
T  10293607 tggcttaattgcatttttttcccctatcttttgtcaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgccccct 10293706  T
Q  333 ttctgattt 341  Q
    |||||||||    
T  10293707 ttctgattt 10293715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 234 - 341
Target Start/End: Complemental strand, 21896565 - 21896459
Alignment:
Q  234 tggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctt 333  Q
    ||||||||||||||||||  || |||| ||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||| |||| ||| ||    
T  21896565 tggcttaattgcattttttccc-ctatattttgtcaattgtgcgattttgcaccccatggttttatacgagcgattttgcaccccatcatttttcccatt 21896467  T
Q  334 tctgattt 341  Q
    | ||||||    
T  21896466 tttgattt 21896459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 235 - 341
Target Start/End: Complemental strand, 40849015 - 40848909
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||||| ||||| |||||||  |||||||||||||||||||||||||||||  |||||||| ||||||||||| ||| ||  ||||| ||||||    
T  40849015 ggcttaattgcacttttcccctctatagtttgccaattgtgcgattttgcaccccatagttttaaacaagcgattttgccccctatagttttcacccttt 40848916  T
Q  335 ctgattt 341  Q
    |||||||    
T  40848915 ctgattt 40848909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 233 - 341
Target Start/End: Complemental strand, 42673351 - 42673244
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccct 332  Q
    |||||||||||||| ||||| || ||||  |||| ||||||||||||||||||||||||  |||||||||||||||||||| ||| ||  ||||||||||    
T  42673351 ttggcttaattgcacttttcccc-ctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccct 42673253  T
Q  333 ttctgattt 341  Q
    |||||||||    
T  42673252 ttctgattt 42673244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 233 - 341
Target Start/End: Complemental strand, 48160389 - 48160281
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccct 332  Q
    |||||||||||||| ||| | || ||||  |||||||||||||||||||||||||||||  |||||||||||||||||||| ||| ||  |||| |||||    
T  48160389 ttggcttaattgcactttccccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagtttttcccct 48160290  T
Q  333 ttctgattt 341  Q
    |||||||||    
T  48160289 ttctgattt 48160281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 234 - 341
Target Start/End: Complemental strand, 47666390 - 47666283
Alignment:
Q  234 tggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctt 333  Q
    ||||||||||||| ||||| || ||||  |||||||||||||| ||||||||||||||  ||| |||||||||||||||| ||| ||  |||||||||||    
T  47666390 tggcttaattgcacttttcccccctatagtttgccaattgtgcaattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 47666291  T
Q  334 tctgattt 341  Q
    ||||||||    
T  47666290 tctgattt 47666283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 235 - 341
Target Start/End: Original strand, 40848521 - 40848626
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||||| ||||| || ||||  |||||||||||||||||||| ||||||||  |||||||||||||||||||| ||| ||  ||||||||||||    
T  40848521 ggcttaattgcacttttcccc-ctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 40848619  T
Q  335 ctgattt 341  Q
    |||||||    
T  40848620 ctgattt 40848626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 235 - 341
Target Start/End: Original strand, 53687888 - 53687994
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||||| ||||| || ||||  |||| ||||||||||||||||||||||||  |||||||||||||||||| | ||| ||  ||||||||||||    
T  53687888 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttaccccctatagttttcccccttt 53687987  T
Q  335 ctgattt 341  Q
    |||||||    
T  53687988 ctgattt 53687994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 236 - 341
Target Start/End: Original strand, 22429159 - 22429264
Alignment:
Q  236 gcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttc 335  Q
    ||||||||||| ||||| || |||| ||||||||||||||||| ||||||||| ||  |||||||||||||||||||  ||| ||  |||||||||||||    
T  22429159 gcttaattgcacttttctcccctatattttgccaattgtgcgactttgcacccaatagttttaaacgagcgattttgtcccctatagttttccccctttc 22429258  T
Q  336 tgattt 341  Q
    ||||||    
T  22429259 tgattt 22429264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 234 - 341
Target Start/End: Original strand, 42672977 - 42673083
Alignment:
Q  234 tggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctt 333  Q
    ||||||||||||| ||||| || ||||  |||||||||||||||||||||||||||||  |||||||||| ||||||||| ||| ||  |||||||||||    
T  42672977 tggcttaattgcacttttcccc-ctatagtttgccaattgtgcgattttgcaccccatagttttaaacgatcgattttgccccctatagttttccccctt 42673075  T
Q  334 tctgattt 341  Q
    | ||||||    
T  42673076 tatgattt 42673083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 263 - 341
Target Start/End: Complemental strand, 10348825 - 10348747
Alignment:
Q  263 tttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctgattt 341  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||| ||| ||  |||||||||||||| ||||    
T  10348825 tttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctaattt 10348747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 263 - 341
Target Start/End: Original strand, 27238493 - 27238571
Alignment:
Q  263 tttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctgattt 341  Q
    |||||||||||||||||||||||||| ||  |||||||||||||||||||| ||| ||  |||||||||||||||||||    
T  27238493 tttgccaattgtgcgattttgcaccctatagttttaaacgagcgattttgccccctatagttttccccctttctgattt 27238571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 233 - 341
Target Start/End: Complemental strand, 24485515 - 24485408
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccct 332  Q
    |||||||||||||| ||||| || ||||  |||||||||||||||||||||||||||||  ||||||| |||||||||||| ||| ||  | ||||||||    
T  24485515 ttggcttaattgcacttttctcc-ctatagtttgccaattgtgcgattttgcaccccatagttttaaatgagcgattttgccccctatagtattccccct 24485417  T
Q  333 ttctgattt 341  Q
    |||| ||||    
T  24485416 ttctaattt 24485408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 233 - 341
Target Start/End: Complemental strand, 53688358 - 53688251
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccct 332  Q
    |||||||||||||| ||| | || ||||  |||||||||||||||||||||||| ||||  ||| |||||||||||||||| ||| ||  ||||||||||    
T  53688358 ttggcttaattgcacttt-ctcccctatagtttgccaattgtgcgattttgcactccatagtttaaaacgagcgattttgccccctatagttttccccct 53688260  T
Q  333 ttctgattt 341  Q
    |||||||||    
T  53688259 ttctgattt 53688251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 235 - 337
Target Start/End: Complemental strand, 47871175 - 47871073
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcacccc-atgtttttaaacgagcgattttgcaccccatctttttccccctt 333  Q
    |||||||||||| ||||| || ||||||||||| ||||||||||||||||||||| |  |||||    ||||||||||||||||||||||||||||| ||    
T  47871175 ggcttaattgcacttttcccc-ctatcttttgctaattgtgcgattttgcacccccacttttttttttgagcgattttgcaccccatctttttccccttt 47871077  T
Q  334 tctg 337  Q
    ||||    
T  47871076 tctg 47871073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 263 - 341
Target Start/End: Complemental strand, 22429622 - 22429544
Alignment:
Q  263 tttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctgattt 341  Q
    |||| ||||||||||||||||||||||||  |||||||||||||||||||| ||| ||  |||| ||||||||||||||    
T  22429622 tttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagtttttcccctttctgattt 22429544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 263 - 341
Target Start/End: Original strand, 24485049 - 24485127
Alignment:
Q  263 tttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctgattt 341  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||| || ||| ||  |||| ||||||||||||||    
T  24485049 tttgccaattgtgcgattttgcaccccatagttttaaacgagcgatttcgccccctatagtttttcccctttctgattt 24485127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 233 - 341
Target Start/End: Original strand, 3353126 - 3353231
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccct 332  Q
    |||||||||||||| ||||| || ||||  |||| ||||||||||||||||||||||||  |||||||||||||||||  | ||| ||  ||||||||||    
T  3353126 ttggcttaattgcacttttcccc-ctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattt--ccccctatagttttccccct 3353222  T
Q  333 ttctgattt 341  Q
    |||||||||    
T  3353223 ttctgattt 3353231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 238 - 341
Target Start/End: Original strand, 9026739 - 9026839
Alignment:
Q  238 ttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctg 337  Q
    |||||||||||||||  | ||||||||||  |||||||| |||||||||||| |  ||||    ||||||||||||||||||||||||||||||||||||    
T  9026739 ttaattgcatttttcctc-ctatcttttgttaattgtgcaattttgcacccctttatttttt--gagcgattttgcaccccatctttttccccctttctg 9026835  T
Q  338 attt 341  Q
    ||||    
T  9026836 attt 9026839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 238 - 341
Target Start/End: Complemental strand, 26007670 - 26007567
Alignment:
Q  238 ttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctg 337  Q
    ||||||||| ||||  || ||||  |||||||||||| |||||||||||  |||  |||||||||||||||||||| ||| ||  |||||||||||||||    
T  26007670 ttaattgcactttttccccctatagtttgccaattgtacgattttgcacttcataattttaaacgagcgattttgccccctatagttttccccctttctg 26007571  T
Q  338 attt 341  Q
    ||||    
T  26007570 attt 26007567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 263 - 341
Target Start/End: Complemental strand, 3353577 - 3353500
Alignment:
Q  263 tttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctgattt 341  Q
    ||||||||||||||||||||||||| |||  |||||||||||||||||||| ||| ||   ||||||||||||||||||    
T  3353577 tttgccaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccctat-agtttccccctttctgattt 3353500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 235 - 325
Target Start/End: Complemental strand, 18875245 - 18875155
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttt 325  Q
    |||||||||||| ||||  || ||||||||||| |||||| |||||||||||||| | |||||    ||||||||||||||||||||||||    
T  18875245 ggcttaattgcacttttgccccctatcttttgctaattgtacgattttgcaccccctctttttttttgagcgattttgcaccccatctttt 18875155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 235 - 341
Target Start/End: Original strand, 26007182 - 26007287
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||||||||| | || ||||  |||| ||||||||||||||||||||||||  |||||||||||||||||||| | | ||  ||||||  ||||    
T  26007182 ggcttaattgcattttccccc-ctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccctctatagttttccatcttt 26007280  T
Q  335 ctgattt 341  Q
    |||||||    
T  26007281 ctgattt 26007287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 263 - 341
Target Start/End: Original strand, 36180582 - 36180660
Alignment:
Q  263 tttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctgattt 341  Q
    |||| |||||||||||||||||| |||||  |||||||||||||||||||  ||| ||  |||||||||||||||||||    
T  36180582 tttgtcaattgtgcgattttgcatcccatagttttaaacgagcgattttgacccctatagttttccccctttctgattt 36180660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 267 - 341
Target Start/End: Complemental strand, 42456217 - 42456144
Alignment:
Q  267 ccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctgattt 341  Q
    |||||||||||||||||||||||||  |||||||||||||||||||| ||| ||   ||||||||||||||||||    
T  42456217 ccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat-agtttccccctttctgattt 42456144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 235 - 316
Target Start/End: Original strand, 10771504 - 10771584
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcacc 316  Q
    |||||||||||||||||  || |||||||||| |||||||||||||||  || |||||||||||| ||||||||||| ||||    
T  10771504 ggcttaattgcatttttttcc-ctatcttttgtcaattgtgcgattttttactccatgtttttaaccgagcgattttacacc 10771584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 233 - 325
Target Start/End: Complemental strand, 10293965 - 10293873
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttt 325  Q
    |||||||||||||| ||||| || ||||||||||  ||||||||||||||||||||| | ||||     |||||||||||||||| |||||||    
T  10293965 ttggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccctcttttgttttgagcgattttgcaccctatctttt 10293873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 233 - 341
Target Start/End: Complemental strand, 44008456 - 44008349
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccct 332  Q
    |||||||||||||| |||||| | ||||  |||||||||||||| |||||||||| |||  |||||||||||| ||||| | ||| ||  ||||| ||||    
T  44008456 ttggcttaattgcacttttcatc-ctatagtttgccaattgtgcaattttgcacctcatagttttaaacgagcaatttttccccctatagttttctccct 44008358  T
Q  333 ttctgattt 341  Q
    |||||||||    
T  44008357 ttctgattt 44008349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 234 - 325
Target Start/End: Original strand, 17372297 - 17372387
Alignment:
Q  234 tggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttt 325  Q
    |||||||||||||  |||  || |||| |||||| ||||||||||||||||||||| |||||||    ||||||||||||||||||||||||    
T  17372297 tggcttaattgcaccttttccccctattttttgctaattgtgcgattttgcaccccctgttttt-tttgagcgattttgcaccccatctttt 17372387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 234 - 325
Target Start/End: Complemental strand, 42627600 - 42627511
Alignment:
Q  234 tggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttt 325  Q
    ||||||||||||| ||||| |||||||||||||| ||||||| ||||||||| ||| | |||||  | ||||||||||||||||||| ||||    
T  42627600 tggcttaattgcacttttc-cctctatcttttgctaattgtgtgattttgcatccc-tctttttttatgagcgattttgcaccccatttttt 42627511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 235 - 325
Target Start/End: Original strand, 20968718 - 20968808
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttt 325  Q
    ||||||||||||  |||| || ||||||||||  ||||||||||||||||||||| | |||||    |||||||||||||||| |||||||    
T  20968718 ggcttaattgcacctttcccccctatcttttgttaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccctatctttt 20968808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 233 - 342
Target Start/End: Original strand, 28702276 - 28702382
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccct 332  Q
    ||||||||||| || ||||  ||||||||||||| ||||| ||||||||||||| |||| |||||||  ||| |||||||||| | ||| |||  |||||    
T  28702276 ttggcttaatttcacttttt-cctctatcttttgtcaattatgcgattttgcactccatatttttaattgagtgattttgcacacaatccttt--cccct 28702372  T
Q  333 ttctgatttg 342  Q
    ||||||||||    
T  28702373 ttctgatttg 28702382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 235 - 297
Target Start/End: Complemental strand, 45060925 - 45060863
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgttttt 297  Q
    |||||||||||| |||||||| ||||||||||| |||||||||||||| ||||| || |||||    
T  45060925 ggcttaattgcacttttcacccctatcttttgctaattgtgcgattttacaccctatcttttt 45060863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 263 - 313
Target Start/End: Original strand, 53766191 - 53766241
Alignment:
Q  263 tttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 313  Q
    |||| ||||||||||||||||||||||||  ||||||||||||||||||||    
T  53766191 tttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgc 53766241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 233 - 297
Target Start/End: Original strand, 1927770 - 1927834
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgttttt 297  Q
    ||||||||||||||  |||| || |||||||||||||||| ||||||||||||||| || |||||    
T  1927770 ttggcttaattgcacctttcccccctatcttttgccaattatgcgattttgcaccctatcttttt 1927834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 286
Target Start/End: Complemental strand, 17441117 - 17441066
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcac 286  Q
    ||||||||||||||||||  ||||||||||||  ||||||||||||||||||    
T  17441117 ggcttaattgcatttttcctctctatcttttgttaattgtgcgattttgcac 17441066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 297
Target Start/End: Original strand, 21895657 - 21895720
Alignment:
Q  235 ggcttaattgca-tttttcacctctatcttttgccaattgtgcgattttgcaccccatgttttt 297  Q
    |||||||||||| |||||| || |||| |||||||||||||| ||||||||||||||| |||||    
T  21895657 ggcttaattgcactttttccccactatgttttgccaattgtgtgattttgcaccccatcttttt 21895720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 291
Target Start/End: Complemental strand, 3644839 - 3644781
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccat 291  Q
    |||||||||||||||||||| ||  ||| |||||  |||||||||||||||||||||||    
T  3644839 ttggcttaattgcatttttcccccttattttttgttaattgtgcgattttgcaccccat 3644781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 296
Target Start/End: Complemental strand, 14016014 - 14015957
Alignment:
Q  238 ttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttt 296  Q
    ||||||||| |||||| | ||||||||||| ||||||||||||||||||||||| ||||    
T  14016014 ttaattgcacttttcatc-ctatcttttgctaattgtgcgattttgcaccccatctttt 14015957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 236 - 341
Target Start/End: Original strand, 10348480 - 10348585
Alignment:
Q  236 gcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttc 335  Q
    ||||||||||| ||||| ||  |||  |||| ||||||| | |||||||| |||||  |||||||||||||||||||  ||| ||  |||| ||||||||    
T  10348480 gcttaattgcacttttctcccgtatagtttgtcaattgttcaattttgcatcccataattttaaacgagcgattttgtcccctatagtttttcccctttc 10348579  T
Q  336 tgattt 341  Q
    ||||||    
T  10348580 tgattt 10348585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 336
Target Start/End: Original strand, 4947263 - 4947362
Alignment:
Q  239 taattgcatttttcacctctatcttttgccaattgtgcgattttgcacc--ccatgtttttaaacgagcgattttgcaccccatctttttccccctttct 336  Q
    |||||||| |||||||| |||| |||||  |||||||||||||||||||  |  | |||||   ||||| |||||||||||||||||||| | |||||||    
T  4947263 taattgcacttttcacccctattttttgttaattgtgcgattttgcaccctctctattttttttcgagcaattttgcaccccatctttttgctcctttct 4947362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 325
Target Start/End: Original strand, 13657472 - 13657536
Alignment:
Q  262 ttttgccaattgtgcgattttgcacccca-tgtttttaaacgagcgattttgcaccccatctttt 325  Q
    ||||||||||||||||||||||||||||  | |||||    ||||||||||||||||||||||||    
T  13657472 ttttgccaattgtgcgattttgcacccccctctttttttttgagcgattttgcaccccatctttt 13657536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 311
Target Start/End: Complemental strand, 36181044 - 36180968
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgatttt 311  Q
    |||||||||||| |||||  | ||||  ||||  ||||||||||||||| |||||||  ||||||||||||||||||    
T  36181044 ggcttaattgcacttttcctccctatagtttgttaattgtgcgattttgtaccccatagttttaaacgagcgatttt 36180968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 303 - 341
Target Start/End: Original strand, 18874957 - 18874996
Alignment:
Q  303 agcgattttgcaccccatcttttt-ccccctttctgattt 341  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  18874957 agcgattttgcaccccatctttttgccccctttctgattt 18874996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 306 - 341
Target Start/End: Original strand, 21895700 - 21895735
Alignment:
Q  306 gattttgcaccccatctttttccccctttctgattt 341  Q
    ||||||||||||||||||||| ||||||||||||||    
T  21895700 gattttgcaccccatcttttttcccctttctgattt 21895735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 288
Target Start/End: Original strand, 18874882 - 18874935
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccc 288  Q
    |||| ||||||| ||||  || ||||||||||| ||||||||||||||||||||    
T  18874882 ggctcaattgcactttttccccctatcttttgctaattgtgcgattttgcaccc 18874935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 283
Target Start/End: Original strand, 45060595 - 45060644
Alignment:
Q  234 tggcttaattgcatttttcacctctatcttttgccaattgtgcgattttg 283  Q
    ||||||||||||| ||||| || ||||||||||| |||| ||||||||||    
T  45060595 tggcttaattgcacttttccccactatcttttgctaattatgcgattttg 45060644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 325
Target Start/End: Original strand, 47870823 - 47870910
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcga-ttttgcaccccatgtttttaaacgagcgattttgcaccccatctttt 325  Q
    |||||||||||| ||||  || ||||||||||| |||| ||||| ||||||||||| | |||||    ||||||||||||||||||||||||    
T  47870823 ggcttaattgcactttttccc-ctatcttttgctaattatgcgaattttgcaccccttttttttt---gagcgattttgcaccccatctttt 47870910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 289
Target Start/End: Complemental strand, 13657673 - 13657621
Alignment:
Q  238 ttaattgcatttttcacctctatctttt-gccaattgtgcgattttgcacccc 289  Q
    ||||||||| ||||  || ||||||||| ||||||||||||||||||||||||    
T  13657673 ttaattgcacttttgtcccctatctttttgccaattgtgcgattttgcacccc 13657621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 341
Target Start/End: Original strand, 44007965 - 44008073
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccct 332  Q
    |||||||||||||| |||||  | ||||  |||  ||||||||| | |||||| |  ||  |||||||||||||||||||| ||| ||  |||| |||||    
T  44007965 ttggcttaattgcacttttcctccctatagtttttcaattgtgcaaatttgcatcttatagttttaaacgagcgattttgccccctatagtttttcccct 44008064  T
Q  333 ttctgattt 341  Q
    |||||||||    
T  44008065 ttctgattt 44008073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 233 - 341
Target Start/End: Complemental strand, 1476 - 1367
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatcttttt-ccccc 331  Q
    |||||||||||||| ||||  || ||||||||||||||||||||||||||||||||| | |||||    ||||||||||||||||||||||||| |||||    
T  1476 ttggcttaattgcactttttccccctatcttttgccaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgccccc 1377  T
Q  332 tttctgattt 341  Q
    ||||||||||    
T  1376 tttctgattt 1367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 233 - 325
Target Start/End: Original strand, 1116 - 1208
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttt 325  Q
    |||||||||||||| ||||  || ||||||||||  ||||||||||||||||||||| | |||||    |||||||||||||||| |||||||    
T  1116 ttggcttaattgcactttttccccctatcttttgttaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccctatctttt 1208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 235 - 341
Target Start/End: Complemental strand, 45860 - 45754
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatcttttt-ccccctt 333  Q
    |||||||||||| ||||| || ||||||||||||||||||||||||||||||||| | |||||    ||||||||||||||||||||||||| |||||||    
T  45860 ggcttaattgcacttttcccc-ctatcttttgccaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgccccctt 45762  T
Q  334 tctgattt 341  Q
    ||||||||    
T  45761 tctgattt 45754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 325
Target Start/End: Original strand, 45537 - 45626
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttt 325  Q
    |||||||||||| ||||| || ||||||||||  |||||||||||||||||| || | |||||    |||||||||||||||| |||||||    
T  45537 ggcttaattgcacttttcccc-ctatcttttgttaattgtgcgattttgcactccctctttttttttgagcgattttgcaccctatctttt 45626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 230 - 341
Target Start/End: Complemental strand, 185333 - 185222
Alignment:
Q  230 aagttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccc 329  Q
    ||||||||||||||||| |||||  | ||||  |||||||||||||||||||||||||||||  |||||||||||||||||||| ||| ||  |||||||    
T  185333 aagttggcttaattgcacttttcctccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccc 185234  T
Q  330 cctttctgattt 341  Q
     |||||||||||    
T  185233 tctttctgattt 185222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 236 - 341
Target Start/End: Original strand, 184840 - 184945
Alignment:
Q  236 gcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttc 335  Q
    ||||||||||| ||||| |||||||  |||| ||| ||||| ||||||||||||||  ||||||||||||||||||||  || ||  |||||||||||||    
T  184840 gcttaattgcacttttctcctctatagtttgtcaactgtgcaattttgcaccccatagttttaaacgagcgattttgccacctatagttttccccctttc 184939  T
Q  336 tgattt 341  Q
    ||||||    
T  184940 tgattt 184945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 234 - 341
Target Start/End: Complemental strand, 6751 - 6644
Alignment:
Q  234 tggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatcttttt-ccccct 332  Q
    ||||||||||||| ||||| || ||||||||||| ||||||||||||||||||||| | |||||    ||||||||||||||||||||||||| ||||||    
T  6751 tggcttaattgcacttttcccc-ctatcttttgctaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgccccct 6653  T
Q  333 ttctgattt 341  Q
    |||||||||    
T  6652 ttctgattt 6644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 235 - 325
Target Start/End: Original strand, 6394 - 6485
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccat-gtttttaaacgagcgattttgcaccccatctttt 325  Q
    |||||||||||| ||||| || ||||||||||| ||||||||||||||||||||| |  |||||     |||||||||||||||||||||||    
T  6394 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccctctttttttttttagcgattttgcaccccatctttt 6485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 235 - 341
Target Start/End: Complemental strand, 25423 - 25316
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatcttttt-ccccctt 333  Q
    |||||||||||| ||||| || ||||||||||| ||||||||||||||||||||| | |||||    ||||||||||||||||||||||||| |||| ||    
T  25423 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgccccatt 25324  T
Q  334 tctgattt 341  Q
    ||||||||    
T  25323 tctgattt 25316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 52; Significance: 1e-20; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 233 - 324
Target Start/End: Original strand, 438928 - 439019
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatcttt 324  Q
    |||||||||||||| ||||| || ||||||||||| ||||||||||||||||||||| | |||||    |||||||||||||||||||||||    
T  438928 ttggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatcttt 439019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 235 - 325
Target Start/End: Complemental strand, 439253 - 439165
Alignment:
Q  235 ggcttaattgca-tttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttt 325  Q
    |||||||||||| |||||| ||| |||||||||| ||||||||||||||||| ||| | |||||    ||||||||||||||||||||||||    
T  439253 ggcttaattgcactttttcccct-tatcttttgctaattgtgcgattttgcatcccctcttttt--ttgagcgattttgcaccccatctttt 439165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 331
Target Start/End: Complemental strand, 183716 - 183621
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtt-tttaaacgagcgattttgcaccccatctttttccccc 331  Q
    |||||||||||| ||||| || |||| |||||| |||||||||| |||||||||| | || ||||   ||||||||||||| ||||||||||| ||||    
T  183716 ggcttaattgcacttttcccccctatattttgctaattgtgcga-tttgcaccccctcttctttatttgagcgattttgca-cccatctttttgcccc 183621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 51; Significance: 4e-20; HSPs: 2)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 235 - 341
Target Start/End: Original strand, 330 - 436
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||||| ||||| || ||||  |||| |||||||||||||||||| |||||  |||||||||||||||||||| ||| ||  |||||||| |||    
T  330 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 429  T
Q  335 ctgattt 341  Q
    |||||||    
T  430 ctgattt 436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 233 - 313
Target Start/End: Complemental strand, 818 - 739
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 313  Q
    |||||||||||||| ||||  || ||||  |||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  818 ttggcttaattgcactttttccc-ctatagtttgccaattgtgcgattttgcaccccataattttaaacgagcgattttgc 739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 51; Significance: 4e-20; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 235 - 341
Target Start/End: Complemental strand, 38749 - 38643
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||||| ||||  || ||||  |||||||||||||||||||||||||||||  | |||||||| ||||||||| ||| ||  ||||||||||||    
T  38749 ggcttaattgcactttttccccctatagtttgccaattgtgcgattttgcaccccatagtcttaaacgaacgattttgccccctatagttttcccccttt 38650  T
Q  335 ctgattt 341  Q
    |||||||    
T  38649 ctgattt 38643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 268 - 341
Target Start/End: Original strand, 38284 - 38357
Alignment:
Q  268 caattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctgattt 341  Q
    |||||||||||||||||| |||||  ||||||| |||||||||||| ||| ||  ||||||| |||||||||||    
T  38284 caattgtgcgattttgcatcccatagttttaaatgagcgattttgccccctatagttttccctctttctgattt 38357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 235 - 341
Target Start/End: Original strand, 9905 - 10012
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcacccc-atgtttttaaacgagcgattttgcaccccatctttttccccctt 333  Q
    |||||||||||| ||||  || ||||  |||||||||||||||||||| |||||| ||  |||||||||||||||||||| ||| ||  |||||||||||    
T  9905 ggcttaattgcactttttccccctatagtttgccaattgtgcgatttttcacccccatagttttaaacgagcgattttgccccctatagttttccccctt 10004  T
Q  334 tctgattt 341  Q
    ||||||||    
T  10005 tctgattt 10012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 46; Significance: 4e-17; HSPs: 2)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 233 - 341
Target Start/End: Complemental strand, 50562 - 50454
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgca-ccccatgtttttaaacgagcgattttgcaccccatctttttccccc 331  Q
    |||||||||||||| ||||| || ||||  ||||||||||||||||||||||| ||||||  |||||||||||| ||||||| ||| ||  ||| |||||    
T  50562 ttggcttaattgcacttttcccc-ctatagtttgccaattgtgcgattttgcacccccatagttttaaacgagcaattttgccccctatagtttaccccc 50464  T
Q  332 tttctgattt 341  Q
    ||||||||||    
T  50463 tttctgattt 50454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 263 - 313
Target Start/End: Original strand, 50101 - 50151
Alignment:
Q  263 tttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 313  Q
    |||| ||||||||| ||||||||||||||  ||||||||||||||||||||    
T  50101 tttgtcaattgtgcaattttgcaccccatagttttaaacgagcgattttgc 50151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 263 - 313
Target Start/End: Original strand, 19648 - 19698
Alignment:
Q  263 tttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 313  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  19648 tttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgc 19698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 233 - 341
Target Start/End: Original strand, 16851 - 16960
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaac--gagcgattttgcaccccatctttttcc-c 329  Q
    ||||||||||||| |||||| |||  ||||||||| |||||||||||| |||||||| | |||||      ||||||||||||||||||||||||||| |    
T  16851 ttggcttaattgcctttttcccct--atcttttgctaattgtgcgattatgcaccccctctttttttttttgagcgattttgcaccccatctttttcctc 16948  T
Q  330 cctttctgattt 341  Q
    ||||||||||||    
T  16949 cctttctgattt 16960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 233 - 325
Target Start/End: Complemental strand, 17211 - 17119
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcacc-ccatgtttttaaacgagcgattttgcaccccatctttt 325  Q
    |||||||||||||| ||||| || ||||||||||| |||||||| |||||||||| ||   |||||    ||||||||||||||||||||||||    
T  17211 ttggcttaattgcacttttcccc-ctatcttttgctaattgtgcaattttgcaccgcctcttttttttttgagcgattttgcaccccatctttt 17119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 235 - 325
Target Start/End: Original strand, 205687 - 205774
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttt 325  Q
    |||||||||||||||||| || ||||||||||| ||||||||||||||||||||| | |||||    || |||||||||||| ||||||||    
T  205687 ggcttaattgcatttttctcc-ctatcttttgctaattgtgcgattttgcaccccctcttttt--ttgaacgattttgcacctcatctttt 205774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 235 - 341
Target Start/End: Original strand, 411923 - 412028
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatcttttt-ccccctt 333  Q
    |||||||||||| ||| | || |||||||||| |||||||||||||||||||||| | |||||     ||||||||||||||| |||||||| |||||||    
T  411923 ggcttaattgcactttacccc-ctatcttttgtcaattgtgcgattttgcaccccctcttttt-tttaagcgattttgcaccctatctttttgccccctt 412020  T
Q  334 tctgattt 341  Q
    ||||||||    
T  412021 tctgattt 412028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1221 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold1221
Description:

Target: scaffold1221; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 233 - 291
Target Start/End: Original strand, 1509 - 1566
Alignment:
Q  233 ttggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccat 291  Q
    |||||||||||||| ||||  |||||||||||||||||||||| |||||||||||||||    
T  1509 ttggcttaattgcacttttt-cctctatcttttgccaattgtgtgattttgcaccccat 1566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 236 - 287
Target Start/End: Original strand, 72967 - 73018
Alignment:
Q  236 gcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcacc 287  Q
    ||||||||||||||||| ||| |||||||||| |||||||| ||||||||||    
T  72967 gcttaattgcatttttcccctttatcttttgctaattgtgcaattttgcacc 73018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0535 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0535
Description:

Target: scaffold0535; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 337
Target Start/End: Original strand, 10012 - 10114
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 334  Q
    |||||||||||| ||||  || |||||||||||||||||| |||||||||| || ||  ||||||  || |||||||| || |  |||||| ||||||||    
T  10012 ggcttaattgcacttttgccccctatcttttgccaattgtacgattttgcatccaatccttttaattgaacgattttgtacactctcttttgcccccttt 10111  T
Q  335 ctg 337  Q
    |||    
T  10112 ctg 10114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 291
Target Start/End: Original strand, 7455 - 7510
Alignment:
Q  235 ggcttaattgcatttttcacctctatcttttgccaattgtgcgattttgcaccccat 291  Q
    |||||||||||| ||||  || ||||||||||| |||| ||||||||||||||||||    
T  7455 ggcttaattgcactttttccc-ctatcttttgctaattatgcgattttgcaccccat 7510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University