View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2587_high_23 (Length: 256)
Name: NF2587_high_23
Description: NF2587
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2587_high_23 |
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Alignment Details
Target: chr1 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 249
Target Start/End: Complemental strand, 34592510 - 34592262
Alignment:
| Q |
1 |
attttcaataagatgtactagaataaattcatatatatgttggactaatgatgctatatgtgtttgtaattttgatgcattaagacgatcttaatatcat |
100 |
Q |
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| T |
34592510 |
attttcaataagatgtgctagaataaattcatatatatgttggattaatgatgctatatgtgtttgtaattttgatgcattaagacgatcttaatatcat |
34592411 |
T |
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| Q |
101 |
ggaaatgtatgacttttccttcttgatgcaatttgaaagccaattaagcttattatttacttttgaaacatttcataaaataaattttaaacacccttcg |
200 |
Q |
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| T |
34592410 |
ggaaatgtatgacttttccttcttgatgcaatttgaaagccaattaagcttattatttactttcaaaacatttcataaaataaattttaaacacccttcg |
34592311 |
T |
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| Q |
201 |
gtttttaaaactgtacctggcttaatcattcagttttttcattttcttc |
249 |
Q |
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||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
34592310 |
gtttttaaaactgtacctggcttaaccattcagttttttcattttcttc |
34592262 |
T |
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