View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2587_low_37 (Length: 236)
Name: NF2587_low_37
Description: NF2587
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2587_low_37 |
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Alignment Details
Target: chr6 (Bit Score: 180; Significance: 2e-97; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 10 - 220
Target Start/End: Original strand, 10573107 - 10573318
Alignment:
| Q |
10 |
tcatgtgcccacatagacactcctttagacctagatttcttccggtgaaataaataatactcggaatccttgcaaggtaactaaactagtagttgatatg |
109 |
Q |
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| T |
10573107 |
tcatgtgcccagataaacactcctttagacctagatttcttccggtgaaataaataatactcggaatccttgcaaggtaactaaactagtagttgatatg |
10573206 |
T |
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| Q |
110 |
tcatgtctctccaagatttttatacctc-taacacatgtattttcttctttaagatcgaacactcccaaagacttcctttaattgctttggatttttctt |
208 |
Q |
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|||||||||||||||||||||||||||| |||||| || |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| |
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| T |
10573207 |
tcatgtctctccaagatttttatacctcttaacacttgcattttcttctttaagatcgaacactcccaaagactttctttaattgccttggatttttctt |
10573306 |
T |
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| Q |
209 |
tcaagacaaaac |
220 |
Q |
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|||||||||||| |
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| T |
10573307 |
tcaagacaaaac |
10573318 |
T |
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