View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2587_low_44 (Length: 208)
Name: NF2587_low_44
Description: NF2587
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2587_low_44 |
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Alignment Details
Target: chr5 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 21 - 177
Target Start/End: Original strand, 23292836 - 23292991
Alignment:
| Q |
21 |
tgaatccaaattaaatcacataaaataggatcagatcgggtcnnnnnnnaaaagtcatatgaactgagccatgggtacttgaattacctcataatcgatc |
120 |
Q |
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||||| |||| ||||||||||||||||||||||||||||||| | ||||||||||||| ||||||||||||||||||||||| ||||||||||| |
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| T |
23292836 |
tgaattcaaactaaatcacataaaataggatcagatcgggtctttttttagaagtcatatgaaccgagccatgggtacttgaattaccgcataatcgatc |
23292935 |
T |
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| Q |
121 |
caaacggtttcacgaacaccccctactcatctcttctcccaattaatgacgagtata |
177 |
Q |
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|||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
23292936 |
caaacggtttcacgaaca-cccctactcatctcttctcccaattaatgacgagtata |
23292991 |
T |
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