View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2587_low_9 (Length: 444)
Name: NF2587_low_9
Description: NF2587
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2587_low_9 |
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Alignment Details
Target: chr7 (Bit Score: 409; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 409; E-Value: 0
Query Start/End: Original strand, 19 - 439
Target Start/End: Complemental strand, 44761467 - 44761047
Alignment:
| Q |
19 |
ccccattcacctttgcatgatgcctgttattaaaacctatatttcttaagctgaaattaagttatccttttccctttttaccttgattcaactcttgcat |
118 |
Q |
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| T |
44761467 |
ccccattcacctttgcatgatgcctgttattaaaacctatatttcttaagctgaaattaagttatccttttccctttttaccttgattcaactcttgcat |
44761368 |
T |
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| Q |
119 |
ttccttaggaatttaataagatgggtttttatgctttttaaatataaaattgaagttttatctttttacatatcttaaactgaatgttgcatttacgtat |
218 |
Q |
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| T |
44761367 |
ttccttagtaatttaataagatgggtttttatgctttttaaatataaaatagaagttttatctttttacatatcttaaactgaatgttgcatttacgtat |
44761268 |
T |
|
| Q |
219 |
tgcagagttggatgttttgatcaatttagctattgccaatgattactatgaaggaccaacctgcagaccaagttttgttgggaccttatgtacaaatgaa |
318 |
Q |
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| T |
44761267 |
tgcagagttggatgttttgatcaatttagctattgccagtgattactatgaaggaccaacctgcagaccaagttttgttgggaccttatgtacaaatgaa |
44761168 |
T |
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| Q |
319 |
gctccctacatctatgctaaaagtctgggacaccccgttcttaggagtgataccttaggaaagagtgcctttgtacctaatgacataaccataggtggtc |
418 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44761167 |
gctccctacatctatgctaaaagtctgggacaccccgttcttaggagtgataccttaggaaagagtgcctttgtacctaatgacataaccataggtggtc |
44761068 |
T |
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| Q |
419 |
cagaccaggcctcctttattc |
439 |
Q |
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| T |
44761067 |
cagaccaggcctcctttattc |
44761047 |
T |
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