View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2589_low_11 (Length: 257)
Name: NF2589_low_11
Description: NF2589
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2589_low_11 |
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Alignment Details
Target: chr8 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 255
Target Start/End: Complemental strand, 33351250 - 33350996
Alignment:
| Q |
1 |
tgtcccttttacatatataaataaccttgcattatagttaatccaaaattaagtgaaattgttgatcctaattaattttttgtgttgaatatggatgcag |
100 |
Q |
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|||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
33351250 |
tgtcccttgtgcatatataaataaccttgcattatagttaatccaaaattaagtgaaattactgatcctaattaattttttgtgttgaatatggatgcag |
33351151 |
T |
|
| Q |
101 |
tattcttgtacgaacaactgagtttgaaagcatcaaagcaaatttgccatggttgttggatgccacagtttgcgtggcactagacttttttgtatcctac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33351150 |
tattcttgtacgaacaactgagtttgaaagcatcaaagcaaatttgccatggttgttggatgccacagtttgcgtggcactagacttttttgtatcctac |
33351051 |
T |
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| Q |
201 |
ttatatattcaaaattttgttatattatacattcagattatcattttcttcgaca |
255 |
Q |
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||||||||||||| ||||||||||||||||||||||||||||||| | ||||||| |
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| T |
33351050 |
ttatatattcaaatttttgttatattatacattcagattatcattattttcgaca |
33350996 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 96 - 172
Target Start/End: Original strand, 7221371 - 7221447
Alignment:
| Q |
96 |
tgcagtattcttgtacgaacaactgagtttgaaagcatcaaagcaaatttgccatggttgttggatgccacagtttg |
172 |
Q |
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||||||||||||||| |||| || || | |||||||||||||| ||| ||||||||||| ||||||||| |||||| |
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| T |
7221371 |
tgcagtattcttgtaagaactacagaatgggaaagcatcaaagctaatatgccatggttgctggatgccatagtttg |
7221447 |
T |
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