View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2591_high_9 (Length: 308)
Name: NF2591_high_9
Description: NF2591
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2591_high_9 |
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Alignment Details
Target: chr4 (Bit Score: 270; Significance: 1e-151; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 18 - 291
Target Start/End: Original strand, 33127539 - 33127812
Alignment:
| Q |
18 |
attaataatatatagttttcattgatgttattgtgttgagtattgtgaattgaatatctttgtcactactaatgaatgttttatttaaaaattaaatgta |
117 |
Q |
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| T |
33127539 |
attaataatatatagttttcattgatgttattgtgttgagtattgtgaattgaatatctttgtcactactaatgaatgttttatttaaaaattaaatgta |
33127638 |
T |
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| Q |
118 |
tggaacaggtaatagcagaggtgataggaacatacttcttaatatttgcagggtgttgcgtagttgttctgaataaagtggaagaaactaaaggaacagt |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33127639 |
tggaacaggtaatagcagaggtgataggaacatacttcttaatatttgcagggtgttgcgtagttgttctgaataaagtggaagaaactaaaggaacagt |
33127738 |
T |
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| Q |
218 |
aacatttcctggaatttgtgtaacatggggtttgtcagttatgatcttggtttattctctaggtcacatctctg |
291 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
33127739 |
aacatttcctggaatttgtgtaacatggggtttgtcagttatgatcttggtttattctcttggtcacatctctg |
33127812 |
T |
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