View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2591_low_1 (Length: 736)

Name: NF2591_low_1
Description: NF2591
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2591_low_1
NF2591_low_1
[»] chr8 (98 HSPs)
chr8 (10-668)||(34176838-34177495)
chr8 (388-569)||(7294104-7294284)
chr8 (388-565)||(2535795-2535972)
chr8 (391-568)||(34176448-34176621)
chr8 (438-568)||(38862858-38862988)
chr8 (389-562)||(10445579-10445752)
chr8 (389-552)||(15230175-15230338)
chr8 (391-569)||(2534697-2534875)
chr8 (389-562)||(25124807-25124980)
chr8 (461-569)||(20385570-20385678)
chr8 (439-567)||(36186105-36186233)
chr8 (389-569)||(44664510-44664690)
chr8 (438-569)||(8316655-8316786)
chr8 (454-569)||(38955983-38956098)
chr8 (438-569)||(40317966-40318097)
chr8 (388-562)||(35634342-35634516)
chr8 (452-569)||(12198952-12199069)
chr8 (452-569)||(12443380-12443497)
chr8 (389-562)||(44664752-44664925)
chr8 (438-568)||(7295222-7295352)
chr8 (452-570)||(12272919-12273037)
chr8 (452-569)||(4994659-4994776)
chr8 (452-569)||(13186368-13186485)
chr8 (389-562)||(37542233-37542406)
chr8 (389-490)||(39474627-39474727)
chr8 (389-550)||(42945358-42945519)
chr8 (452-568)||(1425056-1425172)
chr8 (388-552)||(15229950-15230114)
chr8 (433-569)||(39071932-39072067)
chr8 (438-569)||(23663547-23663678)
chr8 (438-569)||(36928771-36928902)
chr8 (439-569)||(34685554-34685683)
chr8 (393-562)||(25124572-25124741)
chr8 (461-569)||(20386748-20386856)
chr8 (452-553)||(35756891-35756993)
chr8 (389-562)||(6471699-6471872)
chr8 (452-569)||(34061637-34061754)
chr8 (461-569)||(8316906-8317014)
chr8 (461-569)||(23663832-23663940)
chr8 (461-569)||(23698562-23698670)
chr8 (389-481)||(42945204-42945296)
chr8 (399-562)||(8997943-8998106)
chr8 (392-562)||(41353820-41353990)
chr8 (488-569)||(33357500-33357581)
chr8 (389-490)||(38003536-38003637)
chr8 (461-569)||(4405978-4406086)
chr8 (393-569)||(7983430-7983606)
chr8 (461-569)||(16388844-16388952)
chr8 (461-569)||(30712035-30712142)
chr8 (461-569)||(30719812-30719919)
chr8 (461-569)||(31608831-31608939)
chr8 (461-569)||(39071678-39071786)
chr8 (452-569)||(23698310-23698428)
chr8 (389-562)||(37542469-37542642)
chr8 (461-569)||(4994975-4995082)
chr8 (461-569)||(40318282-40318390)
chr8 (459-570)||(43181468-43181579)
chr8 (500-570)||(12199263-12199333)
chr8 (500-570)||(12443691-12443761)
chr8 (392-490)||(21432774-21432872)
chr8 (467-569)||(30459373-30459475)
chr8 (463-569)||(38955705-38955811)
chr8 (389-490)||(21432937-21433038)
chr8 (452-561)||(22915399-22915508)
chr8 (461-569)||(13186062-13186170)
chr8 (391-447)||(34214448-34214504)
chr8 (467-569)||(34060491-34060593)
chr8 (520-570)||(9065666-9065716)
chr8 (391-453)||(34213882-34213944)
chr8 (389-490)||(6471934-6472035)
chr8 (391-448)||(11761963-11762020)
chr8 (504-569)||(16388585-16388650)
chr8 (500-569)||(31608529-31608597)
chr8 (391-447)||(34665894-34665950)
chr8 (389-545)||(41353600-41353756)
chr8 (461-568)||(12273171-12273278)
chr8 (389-480)||(27500332-27500423)
chr8 (461-569)||(1425340-1425447)
chr8 (465-569)||(22915680-22915784)
chr8 (389-433)||(27500226-27500270)
chr8 (391-447)||(34666461-34666517)
chr8 (514-569)||(9065741-9065796)
chr8 (518-569)||(35756586-35756636)
chr8 (495-569)||(7313357-7313431)
chr8 (461-569)||(36928481-36928586)
chr8 (687-720)||(34177514-34177547)
chr8 (520-569)||(42803595-42803644)
chr8 (501-569)||(5960048-5960116)
chr8 (392-436)||(38003701-38003745)
chr8 (502-565)||(10749867-10749930)
chr8 (502-565)||(11763035-11763098)
chr8 (461-568)||(30710859-30710965)
chr8 (495-569)||(7306401-7306475)
chr8 (527-569)||(36186448-36186490)
chr8 (421-562)||(234016-234157)
chr8 (421-562)||(710427-710568)
chr8 (421-562)||(747639-747780)
chr8 (421-562)||(871534-871675)
[»] chr3 (107 HSPs)
chr3 (18-448)||(32716372-32716801)
chr3 (438-569)||(40758405-40758536)
chr3 (388-565)||(9368546-9368723)
chr3 (389-562)||(40788664-40788837)
chr3 (391-551)||(42855553-42855713)
chr3 (389-562)||(29685950-29686123)
chr3 (399-567)||(41558138-41558306)
chr3 (389-557)||(35643865-35644033)
chr3 (453-569)||(36417998-36418114)
chr3 (389-552)||(52032157-52032320)
chr3 (389-562)||(3469209-3469382)
chr3 (389-562)||(29118782-29118955)
chr3 (453-568)||(36417691-36417806)
chr3 (388-562)||(13948789-13948963)
chr3 (438-568)||(26463635-26463765)
chr3 (389-562)||(47551502-47551675)
chr3 (389-557)||(3469444-3469612)
chr3 (390-562)||(32306669-32306841)
chr3 (390-562)||(37778518-37778690)
chr3 (438-569)||(33689384-33689514)
chr3 (388-545)||(43608727-43608884)
chr3 (394-562)||(11910708-11910876)
chr3 (438-562)||(23457988-23458112)
chr3 (452-568)||(42343040-42343156)
chr3 (392-562)||(3596118-3596288)
chr3 (389-535)||(10307619-10307765)
chr3 (438-568)||(46475076-46475205)
chr3 (389-490)||(29118619-29118720)
chr3 (389-562)||(52032383-52032556)
chr3 (461-569)||(23458297-23458405)
chr3 (438-569)||(43384578-43384709)
chr3 (452-569)||(19740925-19741042)
chr3 (389-562)||(32306433-32306606)
chr3 (388-489)||(40788502-40788603)
chr3 (456-569)||(53757036-53757149)
chr3 (461-569)||(2796181-2796289)
chr3 (461-569)||(9367743-9367851)
chr3 (389-557)||(43998159-43998327)
chr3 (461-568)||(41988587-41988694)
chr3 (391-565)||(47857493-47857667)
chr3 (389-490)||(10294804-10294904)
chr3 (389-562)||(29686185-29686357)
chr3 (500-569)||(35712046-35712115)
chr3 (389-486)||(41422057-41422154)
chr3 (461-569)||(3850445-3850553)
chr3 (390-562)||(4322601-4322772)
chr3 (461-569)||(9294276-9294384)
chr3 (461-569)||(3849033-3849141)
chr3 (461-569)||(33689697-33689805)
chr3 (461-569)||(41558010-41558118)
chr3 (500-568)||(55052295-55052363)
chr3 (442-565)||(32431491-32431614)
chr3 (502-569)||(40758149-40758216)
chr3 (388-565)||(6956254-6956432)
chr3 (440-565)||(1079518-1079643)
chr3 (464-569)||(40033777-40033882)
chr3 (461-569)||(19741210-19741318)
chr3 (461-569)||(42342793-42342901)
chr3 (504-568)||(46474818-46474882)
chr3 (461-569)||(51994204-51994312)
chr3 (391-453)||(2944031-2944093)
chr3 (502-568)||(36150530-36150596)
chr3 (388-565)||(1078543-1078719)
chr3 (389-458)||(3596353-3596422)
chr3 (388-433)||(35759046-35759091)
chr3 (391-447)||(1756674-1756730)
chr3 (391-447)||(2944586-2944642)
chr3 (493-568)||(21783403-21783476)
chr3 (388-480)||(29192910-29193002)
chr3 (391-447)||(37249718-37249774)
chr3 (391-447)||(45278668-45278724)
chr3 (391-447)||(45279204-45279260)
chr3 (391-447)||(48189019-48189075)
chr3 (501-569)||(51993966-51994034)
chr3 (391-442)||(11026552-11026603)
chr3 (502-569)||(25107215-25107282)
chr3 (390-433)||(43105371-43105414)
chr3 (461-568)||(53756747-53756854)
chr3 (520-570)||(9292244-9292294)
chr3 (503-565)||(23276343-23276405)
chr3 (495-569)||(53856409-53856483)
chr3 (391-448)||(32717025-32717082)
chr3 (520-569)||(34142595-34142644)
chr3 (391-447)||(1757224-1757280)
chr3 (505-569)||(2796459-2796523)
chr3 (388-480)||(29192126-29192218)
chr3 (391-447)||(37249323-37249379)
chr3 (391-447)||(48188502-48188558)
chr3 (423-562)||(4323482-4323621)
chr3 (388-562)||(10294576-10294744)
chr3 (391-433)||(43105754-43105796)
chr3 (444-545)||(21185996-21186097)
chr3 (520-569)||(26463963-26464012)
chr3 (520-569)||(55052625-55052673)
chr3 (461-565)||(25108413-25108517)
chr3 (500-564)||(40033526-40033590)
chr3 (521-568)||(40506165-40506213)
chr3 (389-433)||(43998389-43998433)
chr3 (502-565)||(23272830-23272893)
chr3 (502-569)||(33154879-33154946)
chr3 (391-433)||(11026075-11026117)
chr3 (452-562)||(33506257-33506367)
chr3 (396-430)||(41989541-41989575)
chr3 (391-565)||(47856393-47856567)
chr3 (495-569)||(53856017-53856091)
chr3 (431-552)||(10770509-10770630)
chr3 (461-562)||(33156312-33156413)
[»] chr4 (124 HSPs)
chr4 (50-448)||(23455077-23455474)
chr4 (390-569)||(147321-147500)
chr4 (392-562)||(39667023-39667193)
chr4 (439-569)||(52909549-52909679)
chr4 (389-562)||(27068919-27069092)
chr4 (390-569)||(148002-148181)
chr4 (431-569)||(10780715-10780853)
chr4 (431-569)||(10974324-10974462)
chr4 (431-569)||(24350720-24350858)
chr4 (439-569)||(51692815-51692945)
chr4 (389-557)||(10408133-10408301)
chr4 (389-557)||(45463317-45463485)
chr4 (438-569)||(7452098-7452229)
chr4 (430-569)||(39539205-39539344)
chr4 (388-562)||(54858569-54858743)
chr4 (391-569)||(55867362-55867540)
chr4 (389-562)||(45463082-45463255)
chr4 (389-562)||(52573237-52573410)
chr4 (438-570)||(44967070-44967202)
chr4 (391-569)||(11447977-11448155)
chr4 (438-569)||(17355927-17356058)
chr4 (438-568)||(54086698-54086828)
chr4 (389-562)||(50504069-50504242)
chr4 (389-490)||(51859488-51859589)
chr4 (389-562)||(54858804-54858977)
chr4 (461-569)||(10781802-10781910)
chr4 (464-568)||(11108161-11108265)
chr4 (461-569)||(24349676-24349784)
chr4 (452-568)||(35028001-35028117)
chr4 (452-568)||(37248514-37248630)
chr4 (438-569)||(13058277-13058408)
chr4 (454-569)||(34765382-34765497)
chr4 (438-569)||(46661209-46661340)
chr4 (431-569)||(1179088-1179226)
chr4 (431-569)||(14802023-14802161)
chr4 (393-562)||(3032591-3032760)
chr4 (452-569)||(23613587-23613704)
chr4 (389-562)||(27069154-27069327)
chr4 (452-569)||(36008846-36008963)
chr4 (452-569)||(49879209-49879326)
chr4 (452-569)||(50418670-50418787)
chr4 (389-490)||(50503906-50504007)
chr4 (452-568)||(37976156-37976272)
chr4 (388-562)||(10407898-10408072)
chr4 (463-569)||(18831637-18831743)
chr4 (438-568)||(43155532-43155662)
chr4 (388-562)||(51859650-51859823)
chr4 (389-562)||(11523958-11524131)
chr4 (452-569)||(15507675-15507792)
chr4 (389-557)||(22718183-22718351)
chr4 (452-569)||(5369176-5369293)
chr4 (389-490)||(9731456-9731557)
chr4 (452-569)||(24711389-24711506)
chr4 (389-490)||(27891665-27891766)
chr4 (388-565)||(32063581-32063758)
chr4 (389-562)||(39701153-39701326)
chr4 (389-562)||(52573472-52573645)
chr4 (461-569)||(13058039-13058147)
chr4 (389-557)||(22986865-22987033)
chr4 (389-557)||(39700923-39701091)
chr4 (438-569)||(53129508-53129639)
chr4 (394-562)||(5818024-5818192)
chr4 (461-569)||(14801738-14801846)
chr4 (461-569)||(18831351-18831459)
chr4 (461-569)||(35028316-35028424)
chr4 (389-489)||(39666858-39666958)
chr4 (461-569)||(50418955-50419063)
chr4 (390-562)||(50751745-50751916)
chr4 (475-569)||(24411680-24411774)
chr4 (500-569)||(1178059-1178127)
chr4 (501-570)||(16006151-16006220)
chr4 (461-570)||(17356240-17356349)
chr4 (461-570)||(37248237-37248346)
chr4 (451-540)||(54713660-54713749)
chr4 (461-569)||(24711113-24711221)
chr4 (438-565)||(30642441-30642568)
chr4 (389-533)||(39538121-39538262)
chr4 (464-569)||(5368949-5369054)
chr4 (388-449)||(40316908-40316969)
chr4 (388-449)||(40326982-40327043)
chr4 (500-569)||(48528487-48528556)
chr4 (461-570)||(54087013-54087122)
chr4 (461-569)||(7451836-7451944)
chr4 (502-570)||(15508032-15508099)
chr4 (461-569)||(23613311-23613419)
chr4 (461-569)||(34765698-34765806)
chr4 (461-569)||(43155814-43155922)
chr4 (461-569)||(44967356-44967464)
chr4 (461-569)||(51692555-51692663)
chr4 (461-569)||(52909255-52909363)
chr4 (463-570)||(53701813-53701920)
chr4 (391-453)||(23455609-23455671)
chr4 (388-545)||(30641546-30641700)
chr4 (389-562)||(22717948-22718121)
chr4 (389-562)||(22987095-22987268)
chr4 (461-569)||(36009131-36009240)
chr4 (390-447)||(52815787-52815844)
chr4 (500-569)||(53129863-53129932)
chr4 (391-447)||(38982516-38982572)
chr4 (391-447)||(52816343-52816399)
chr4 (391-447)||(56556706-56556762)
chr4 (502-565)||(40387473-40387536)
chr4 (502-565)||(41583590-41583653)
chr4 (461-563)||(49879494-49879596)
chr4 (500-569)||(55866113-55866180)
chr4 (444-545)||(8438307-8438407)
chr4 (506-570)||(24411359-24411423)
chr4 (461-569)||(54435415-54435523)
chr4 (391-447)||(56557245-56557301)
chr4 (389-428)||(11524193-11524232)
chr4 (422-557)||(22923152-22923287)
chr4 (422-557)||(22927805-22927940)
chr4 (422-557)||(22984084-22984219)
chr4 (422-557)||(22997672-22997807)
chr4 (423-562)||(50750896-50751035)
chr4 (461-569)||(35508558-35508666)
chr4 (505-569)||(37976515-37976579)
chr4 (502-552)||(7280228-7280278)
chr4 (524-566)||(16005843-16005885)
chr4 (452-562)||(27149303-27149412)
chr4 (444-569)||(8439525-8439649)
chr4 (394-447)||(38813678-38813731)
chr4 (520-565)||(41582453-41582498)
chr4 (520-569)||(53702175-53702224)
[»] chr5 (102 HSPs)
chr5 (388-569)||(11741762-11741943)
chr5 (431-569)||(14194425-14194563)
chr5 (438-569)||(13963124-13963255)
chr5 (438-569)||(16156857-16156988)
chr5 (438-569)||(39453594-39453725)
chr5 (435-569)||(27587407-27587541)
chr5 (438-568)||(43159109-43159239)
chr5 (439-568)||(11740690-11740819)
chr5 (438-569)||(17202694-17202825)
chr5 (389-562)||(20153162-20153332)
chr5 (390-568)||(21257408-21257586)
chr5 (465-569)||(42265737-42265841)
chr5 (438-569)||(11762012-11762143)
chr5 (438-569)||(28269424-28269555)
chr5 (452-569)||(6301852-6301967)
chr5 (461-570)||(35512432-35512541)
chr5 (438-566)||(8322699-8322827)
chr5 (454-570)||(19892309-19892425)
chr5 (438-569)||(3528875-3529006)
chr5 (438-569)||(6150715-6150846)
chr5 (438-569)||(16083238-16083369)
chr5 (438-569)||(20814138-20814268)
chr5 (438-569)||(29646364-29646495)
chr5 (452-569)||(6301548-6301662)
chr5 (438-568)||(11047732-11047861)
chr5 (471-569)||(18247404-18247502)
chr5 (439-569)||(38442363-38442493)
chr5 (452-569)||(186728-186845)
chr5 (389-562)||(17544292-17544465)
chr5 (397-562)||(33871590-33871755)
chr5 (438-558)||(5994184-5994304)
chr5 (438-569)||(27937057-27937186)
chr5 (438-569)||(5024021-5024152)
chr5 (438-569)||(32242537-32242667)
chr5 (452-569)||(35920230-35920347)
chr5 (461-570)||(39453301-39453410)
chr5 (402-562)||(8875458-8875618)
chr5 (438-569)||(19517902-19518033)
chr5 (438-569)||(28770871-28771002)
chr5 (389-552)||(33871358-33871521)
chr5 (438-569)||(38475035-38475166)
chr5 (389-562)||(20152790-20152962)
chr5 (466-569)||(20840760-20840863)
chr5 (438-545)||(21265169-21265276)
chr5 (389-491)||(17544128-17544230)
chr5 (459-568)||(5024334-5024443)
chr5 (464-569)||(20814456-20814561)
chr5 (461-569)||(5993891-5993999)
chr5 (461-569)||(6150456-6150564)
chr5 (461-569)||(24547443-24547551)
chr5 (461-569)||(37991201-37991309)
chr5 (465-568)||(5835748-5835851)
chr5 (461-568)||(35512151-35512258)
chr5 (461-564)||(38442075-38442178)
chr5 (392-490)||(21287904-21288002)
chr5 (461-570)||(37992606-37992715)
chr5 (461-569)||(11761751-11761859)
chr5 (464-568)||(13362549-13362653)
chr5 (461-569)||(13962866-13962974)
chr5 (461-569)||(19892626-19892734)
chr5 (389-545)||(22298568-22298724)
chr5 (461-568)||(32242245-32242352)
chr5 (388-474)||(22869702-22869788)
chr5 (439-568)||(10684234-10684362)
chr5 (464-569)||(20840535-20840640)
chr5 (388-453)||(22870379-22870444)
chr5 (504-569)||(28771199-28771264)
chr5 (505-569)||(18247088-18247152)
chr5 (389-433)||(20153056-20153100)
chr5 (485-569)||(24547179-24547263)
chr5 (461-569)||(27587150-27587258)
chr5 (391-447)||(36476889-36476945)
chr5 (461-569)||(38475317-38475425)
chr5 (461-569)||(18670204-18670309)
chr5 (461-570)||(16082978-16083087)
chr5 (520-569)||(16157232-16157281)
chr5 (461-569)||(3529160-3529268)
chr5 (461-569)||(17202401-17202509)
chr5 (500-568)||(18670507-18670575)
chr5 (391-447)||(20072245-20072301)
chr5 (391-447)||(20072789-20072845)
chr5 (461-569)||(35920502-35920610)
chr5 (391-447)||(36477296-36477352)
chr5 (391-447)||(39181716-39181772)
chr5 (391-433)||(39181195-39181237)
chr5 (464-569)||(5835625-5835730)
chr5 (461-569)||(21265459-21265568)
chr5 (520-569)||(30096919-30096968)
chr5 (461-569)||(186422-186529)
chr5 (461-569)||(14194741-14194848)
chr5 (391-447)||(16533545-16533601)
chr5 (391-453)||(20857050-20857113)
chr5 (391-453)||(20857466-20857529)
chr5 (461-570)||(5256330-5256438)
chr5 (409-490)||(21287824-21287905)
chr5 (440-565)||(24141458-24141583)
chr5 (523-568)||(27937379-27937424)
chr5 (391-447)||(16533017-16533073)
chr5 (464-552)||(41930806-41930894)
chr5 (461-565)||(42067842-42067946)
chr5 (502-565)||(40150173-40150236)
chr5 (438-508)||(13362290-13362360)
[»] chr2 (68 HSPs)
chr2 (388-568)||(6588686-6588866)
chr2 (391-569)||(3555252-3555430)
chr2 (388-569)||(25230104-25230285)
chr2 (389-562)||(8710712-8710885)
chr2 (438-567)||(44713799-44713928)
chr2 (389-552)||(15604583-15604746)
chr2 (438-570)||(36480013-36480145)
chr2 (438-569)||(36382422-36382553)
chr2 (438-569)||(37895349-37895480)
chr2 (438-569)||(39423810-39423941)
chr2 (388-562)||(15604348-15604522)
chr2 (439-569)||(36755384-36755514)
chr2 (439-560)||(13692516-13692637)
chr2 (438-569)||(10713018-10713149)
chr2 (438-569)||(15848383-15848514)
chr2 (438-569)||(16099319-16099450)
chr2 (438-569)||(34448090-34448221)
chr2 (438-569)||(45556342-45556473)
chr2 (431-569)||(9076355-9076493)
chr2 (389-562)||(8342196-8342369)
chr2 (438-569)||(6658142-6658273)
chr2 (438-569)||(11163056-11163187)
chr2 (438-569)||(39498574-39498705)
chr2 (463-569)||(3556329-3556435)
chr2 (392-562)||(41587244-41587413)
chr2 (389-562)||(11830373-11830546)
chr2 (436-569)||(30729623-30729756)
chr2 (464-569)||(44045323-44045428)
chr2 (407-562)||(28226006-28226161)
chr2 (392-565)||(202605-202778)
chr2 (389-562)||(41588302-41588475)
chr2 (461-569)||(15848090-15848198)
chr2 (461-569)||(21370520-21370628)
chr2 (388-480)||(25624350-25624442)
chr2 (438-569)||(25231143-25231274)
chr2 (469-569)||(2318836-2318936)
chr2 (388-480)||(25623379-25623471)
chr2 (391-529)||(39936495-39936633)
chr2 (520-569)||(34447815-34447864)
chr2 (461-569)||(39423517-39423625)
chr2 (461-569)||(44044116-44044224)
chr2 (388-433)||(8710606-8710651)
chr2 (461-569)||(2318161-2318268)
chr2 (461-569)||(11163341-11163449)
chr2 (461-569)||(16099057-16099165)
chr2 (461-569)||(22051311-22051419)
chr2 (391-481)||(199098-199188)
chr2 (463-569)||(6307038-6307143)
chr2 (391-453)||(29958467-29958529)
chr2 (461-570)||(36479718-36479828)
chr2 (464-569)||(45556114-45556219)
chr2 (391-447)||(20983181-20983237)
chr2 (391-447)||(21103205-21103261)
chr2 (461-569)||(44714079-44714186)
chr2 (463-570)||(10712724-10712831)
chr2 (461-568)||(37895665-37895772)
chr2 (461-564)||(39498317-39498420)
chr2 (391-433)||(29957955-29957997)
chr2 (463-569)||(36382163-36382269)
chr2 (461-569)||(6657880-6657988)
chr2 (391-447)||(20982648-20982704)
chr2 (394-562)||(8342436-8342596)
chr2 (438-565)||(28228676-28228803)
chr2 (459-565)||(28230055-28230161)
chr2 (499-548)||(3229717-3229766)
chr2 (521-569)||(36755095-36755143)
chr2 (499-552)||(3123476-3123529)
chr2 (503-564)||(6846791-6846852)
[»] chr7 (101 HSPs)
chr7 (389-569)||(33808325-33808505)
chr7 (388-565)||(18087583-18087760)
chr7 (389-550)||(25628499-25628660)
chr7 (438-569)||(27396631-27396762)
chr7 (439-569)||(6253736-6253866)
chr7 (455-569)||(10936106-10936220)
chr7 (452-569)||(28469012-28469129)
chr7 (389-562)||(32068105-32068278)
chr7 (389-562)||(32934357-32934530)
chr7 (389-562)||(42618155-42618328)
chr7 (438-569)||(2640180-2640311)
chr7 (438-569)||(24389080-24389211)
chr7 (438-568)||(27992003-27992133)
chr7 (435-569)||(42019599-42019733)
chr7 (451-569)||(42362452-42362570)
chr7 (388-566)||(47945362-47945531)
chr7 (388-566)||(47950792-47950961)
chr7 (389-562)||(25453372-25453545)
chr7 (391-539)||(43124400-43124548)
chr7 (438-569)||(17102284-17102415)
chr7 (389-552)||(25628722-25628885)
chr7 (390-557)||(33828219-33828386)
chr7 (463-569)||(48788805-48788911)
chr7 (389-562)||(10600193-10600366)
chr7 (389-562)||(28890588-28890761)
chr7 (389-562)||(32068340-32068513)
chr7 (388-565)||(32687403-32687580)
chr7 (388-565)||(32688463-32688640)
chr7 (389-562)||(32934592-32934765)
chr7 (389-562)||(42617920-42618093)
chr7 (444-569)||(47946775-47946900)
chr7 (444-569)||(47952205-47952330)
chr7 (389-565)||(18086295-18086471)
chr7 (390-562)||(23058674-23058846)
chr7 (461-569)||(40380002-40380110)
chr7 (391-545)||(18855902-18856056)
chr7 (392-562)||(25453137-25453307)
chr7 (461-566)||(40379774-40379879)
chr7 (393-562)||(43266514-43266683)
chr7 (388-544)||(5455854-5456010)
chr7 (461-569)||(5457225-5457333)
chr7 (461-569)||(45010922-45011030)
chr7 (438-569)||(13386042-13386173)
chr7 (438-569)||(17886785-17886916)
chr7 (438-569)||(42731714-42731845)
chr7 (431-569)||(32053145-32053283)
chr7 (389-562)||(27138185-27138358)
chr7 (389-490)||(46205553-46205654)
chr7 (388-480)||(4226216-4226308)
chr7 (438-550)||(17885649-17885761)
chr7 (485-569)||(32298779-32298863)
chr7 (463-569)||(22871597-22871703)
chr7 (388-481)||(12228475-12228568)
chr7 (389-490)||(22081640-22081741)
chr7 (396-552)||(39274889-39275045)
chr7 (389-562)||(43266275-43266448)
chr7 (393-562)||(46204430-46204599)
chr7 (461-569)||(10935796-10935904)
chr7 (397-557)||(22081811-22081971)
chr7 (461-569)||(28469326-28469434)
chr7 (461-569)||(42731421-42731529)
chr7 (461-568)||(37656855-37656962)
chr7 (504-570)||(24388820-24388886)
chr7 (388-557)||(13384516-13384685)
chr7 (461-569)||(6253473-6253581)
chr7 (461-569)||(17102022-17102130)
chr7 (388-480)||(45914615-45914707)
chr7 (502-569)||(27396954-27397021)
chr7 (461-568)||(42019915-42020022)
chr7 (461-563)||(2640496-2640598)
chr7 (376-474)||(12643197-12643295)
chr7 (463-569)||(19204778-19204884)
chr7 (388-562)||(23058438-23058612)
chr7 (461-569)||(23181312-23181420)
chr7 (461-569)||(32299023-32299131)
chr7 (493-569)||(43123177-43123253)
chr7 (502-569)||(20426689-20426756)
chr7 (438-569)||(3914433-3914559)
chr7 (504-562)||(22828179-22828237)
chr7 (495-569)||(28105503-28105577)
chr7 (464-569)||(6571015-6571120)
chr7 (500-569)||(18670220-18670289)
chr7 (464-569)||(19204491-19204596)
chr7 (500-569)||(37657194-37657263)
chr7 (392-448)||(4227093-4227149)
chr7 (388-480)||(12644050-12644142)
chr7 (391-447)||(22661481-22661537)
chr7 (391-447)||(27480111-27480167)
chr7 (461-569)||(27991741-27991849)
chr7 (391-433)||(27480667-27480709)
chr7 (388-474)||(47558127-47558213)
chr7 (523-569)||(29141556-29141602)
chr7 (393-569)||(29144232-29144408)
chr7 (495-569)||(34799510-34799584)
chr7 (452-517)||(22871362-22871427)
chr7 (521-569)||(20425480-20425528)
chr7 (439-511)||(33809400-33809472)
chr7 (388-428)||(47558984-47559024)
chr7 (465-552)||(16803967-16804054)
chr7 (495-569)||(1960227-1960301)
chr7 (495-569)||(34793906-34793980)
[»] chr1 (104 HSPs)
chr1 (376-569)||(5734012-5734204)
chr1 (389-557)||(7371304-7371472)
chr1 (394-562)||(45750091-45750259)
chr1 (390-569)||(46899063-46899242)
chr1 (439-569)||(36694284-36694414)
chr1 (439-569)||(36710385-36710515)
chr1 (389-562)||(49955356-49955529)
chr1 (389-562)||(49955591-49955764)
chr1 (436-568)||(37578195-37578327)
chr1 (438-569)||(30711622-30711753)
chr1 (390-569)||(46899847-46900026)
chr1 (438-568)||(40210373-40210503)
chr1 (389-562)||(8898526-8898699)
chr1 (389-562)||(17188963-17189136)
chr1 (389-562)||(40714453-40714626)
chr1 (438-569)||(6367857-6367988)
chr1 (392-562)||(20760752-20760922)
chr1 (388-562)||(35038464-35038638)
chr1 (452-569)||(26024701-26024818)
chr1 (389-562)||(35040858-35041031)
chr1 (452-569)||(43759131-43759248)
chr1 (389-562)||(45749851-45750024)
chr1 (438-569)||(19017631-19017762)
chr1 (438-568)||(1841754-1841883)
chr1 (439-569)||(24009577-24009707)
chr1 (452-569)||(1103770-1103887)
chr1 (452-569)||(13914070-13914187)
chr1 (452-569)||(17661854-17661970)
chr1 (438-569)||(183223-183354)
chr1 (438-569)||(48779414-48779545)
chr1 (438-564)||(49723021-49723147)
chr1 (388-569)||(5734956-5735137)
chr1 (389-490)||(31058301-31058402)
chr1 (452-569)||(32917569-32917686)
chr1 (389-562)||(40714688-40714860)
chr1 (452-569)||(47999125-47999242)
chr1 (461-569)||(4960542-4960650)
chr1 (389-562)||(8898761-8898934)
chr1 (389-490)||(28324885-28324986)
chr1 (461-569)||(19515821-19515929)
chr1 (394-562)||(37929427-37929595)
chr1 (439-567)||(41099029-41099157)
chr1 (452-569)||(19322894-19323011)
chr1 (388-545)||(32132330-32132487)
chr1 (461-570)||(42248474-42248583)
chr1 (461-569)||(6367564-6367672)
chr1 (461-565)||(17691225-17691329)
chr1 (394-562)||(30326505-30326673)
chr1 (461-569)||(34849013-34849121)
chr1 (389-536)||(12905903-12906050)
chr1 (461-568)||(17692503-17692610)
chr1 (403-562)||(31050959-31051118)
chr1 (467-569)||(13300228-13300330)
chr1 (438-568)||(23209365-23209494)
chr1 (463-569)||(34850385-34850491)
chr1 (439-569)||(35473633-35473763)
chr1 (452-569)||(7820956-7821073)
chr1 (500-569)||(35152687-35152756)
chr1 (461-570)||(40210688-40210797)
chr1 (454-566)||(4960820-4960932)
chr1 (452-568)||(19323201-19323317)
chr1 (461-569)||(23209645-23209753)
chr1 (500-568)||(40435348-40435416)
chr1 (461-569)||(40772509-40772617)
chr1 (438-569)||(34464451-34464582)
chr1 (461-568)||(46163033-46163140)
chr1 (439-569)||(7821250-7821379)
chr1 (464-569)||(41098735-41098840)
chr1 (461-569)||(26024425-26024533)
chr1 (461-569)||(30711329-30711437)
chr1 (461-569)||(36694566-36694674)
chr1 (461-569)||(36710667-36710775)
chr1 (461-569)||(37578510-37578618)
chr1 (461-568)||(24009859-24009966)
chr1 (502-569)||(31197067-31197134)
chr1 (462-560)||(42248790-42248886)
chr1 (461-569)||(183509-183618)
chr1 (464-569)||(19017950-19018055)
chr1 (500-569)||(40772816-40772885)
chr1 (504-569)||(47999453-47999518)
chr1 (461-569)||(13914385-13914493)
chr1 (461-569)||(25647886-25647994)
chr1 (500-568)||(42533027-42533095)
chr1 (391-447)||(46282713-46282769)
chr1 (438-569)||(7231544-7231675)
chr1 (439-569)||(48692310-48692440)
chr1 (500-569)||(14879315-14879384)
chr1 (389-490)||(28325048-28325149)
chr1 (504-569)||(34464810-34464875)
chr1 (461-569)||(17662168-17662276)
chr1 (391-447)||(46282195-46282251)
chr1 (391-447)||(49093165-49093221)
chr1 (391-447)||(49093733-49093789)
chr1 (493-570)||(40439539-40439616)
chr1 (461-567)||(1103463-1103571)
chr1 (388-453)||(13295253-13295318)
chr1 (461-562)||(14878980-14879081)
chr1 (520-569)||(35152345-35152394)
chr1 (391-447)||(50062327-50062383)
chr1 (391-433)||(50062868-50062910)
chr1 (524-569)||(6518177-6518222)
chr1 (464-545)||(48691174-48691255)
chr1 (438-552)||(24905186-24905300)
chr1 (495-569)||(51015635-51015709)
[»] scaffold0128 (1 HSPs)
scaffold0128 (393-568)||(19860-20035)
[»] chr6 (61 HSPs)
chr6 (389-562)||(7160813-7160986)
chr6 (388-569)||(8089445-8089626)
chr6 (389-562)||(22503018-22503191)
chr6 (390-569)||(20651012-20651191)
chr6 (438-569)||(30726054-30726185)
chr6 (438-569)||(33517829-33517960)
chr6 (439-569)||(12080932-12081062)
chr6 (389-562)||(6517512-6517684)
chr6 (389-550)||(21836053-21836212)
chr6 (389-562)||(21836274-21836447)
chr6 (389-562)||(22502783-22502956)
chr6 (452-569)||(30337727-30337844)
chr6 (461-569)||(681046-681154)
chr6 (438-570)||(11434803-11434935)
chr6 (438-569)||(3059551-3059682)
chr6 (390-569)||(13379729-13379908)
chr6 (438-569)||(21627715-21627846)
chr6 (389-552)||(31407122-31407285)
chr6 (461-569)||(679868-679976)
chr6 (453-569)||(33647261-33647377)
chr6 (438-568)||(30804156-30804286)
chr6 (389-562)||(7905252-7905425)
chr6 (389-562)||(7905487-7905660)
chr6 (389-562)||(15913792-15913965)
chr6 (452-569)||(17734198-17734315)
chr6 (389-562)||(31406887-31407060)
chr6 (438-569)||(11393099-11393230)
chr6 (395-569)||(20651899-20652073)
chr6 (389-553)||(10781402-10781566)
chr6 (389-545)||(15913574-15913730)
chr6 (461-568)||(33517537-33517644)
chr6 (464-569)||(8090248-8090353)
chr6 (464-569)||(12407510-12407615)
chr6 (389-481)||(12065310-12065402)
chr6 (467-565)||(15116556-15116654)
chr6 (464-569)||(12408492-12408597)
chr6 (461-569)||(30337451-30337559)
chr6 (392-559)||(7161051-7161218)
chr6 (423-569)||(15115341-15115487)
chr6 (391-448)||(4117467-4117524)
chr6 (464-569)||(21628034-21628139)
chr6 (461-569)||(26463181-26463289)
chr6 (451-568)||(22617886-22618004)
chr6 (461-569)||(12080638-12080746)
chr6 (391-447)||(14657129-14657185)
chr6 (461-569)||(30725762-30725869)
chr6 (391-447)||(33400090-33400146)
chr6 (461-568)||(3059260-3059367)
chr6 (502-569)||(26464558-26464625)
chr6 (461-568)||(30803864-30803971)
chr6 (391-448)||(4116922-4116979)
chr6 (493-565)||(28498375-28498447)
chr6 (391-433)||(1661350-1661392)
chr6 (461-543)||(11392866-11392948)
chr6 (391-433)||(14656618-14656660)
chr6 (464-569)||(17734484-17734589)
chr6 (391-442)||(33401045-33401097)
chr6 (514-557)||(24210545-24210588)
chr6 (391-426)||(33400874-33400909)
chr6 (505-570)||(8418398-8418462)
chr6 (504-565)||(29810797-29810858)
[»] scaffold0775 (2 HSPs)
scaffold0775 (392-565)||(6227-6400)
scaffold0775 (391-569)||(4964-5142)
[»] scaffold0328 (2 HSPs)
scaffold0328 (389-562)||(11384-11557)
scaffold0328 (389-490)||(11221-11322)
[»] scaffold0388 (2 HSPs)
scaffold0388 (392-562)||(12486-12656)
scaffold0388 (389-490)||(12321-12421)
[»] scaffold0707 (1 HSPs)
scaffold0707 (452-569)||(6388-6505)
[»] scaffold0771 (1 HSPs)
scaffold0771 (388-562)||(929-1103)
[»] scaffold0006 (2 HSPs)
scaffold0006 (388-550)||(221812-221972)
scaffold0006 (389-562)||(222033-222206)
[»] scaffold0031 (2 HSPs)
scaffold0031 (438-569)||(69260-69391)
scaffold0031 (461-569)||(68967-69075)
[»] scaffold0005 (2 HSPs)
scaffold0005 (431-569)||(37566-37704)
scaffold0005 (461-569)||(37881-37989)
[»] scaffold0599 (1 HSPs)
scaffold0599 (394-562)||(2402-2570)
[»] scaffold0020 (2 HSPs)
scaffold0020 (438-568)||(139936-140066)
scaffold0020 (502-568)||(139675-139741)
[»] scaffold0042 (1 HSPs)
scaffold0042 (394-490)||(12029-12125)
[»] scaffold0075 (2 HSPs)
scaffold0075 (438-569)||(14431-14562)
scaffold0075 (502-569)||(14749-14816)
[»] scaffold0007 (2 HSPs)
scaffold0007 (452-569)||(2050-2167)
scaffold0007 (461-569)||(1771-1879)
[»] scaffold0295 (1 HSPs)
scaffold0295 (519-569)||(2505-2555)


Alignment Details
Target: chr8 (Bit Score: 546; Significance: 0; HSPs: 98)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 546; E-Value: 0
Query Start/End: Original strand, 10 - 668
Target Start/End: Original strand, 34176838 - 34177495
Alignment:
Q  10 caaaggcatggtaatatgtgtttggaagagaaaggaaaactatagaaatgagaggaaatagctgcaacatcaatcacattcaacactgccgcaaatcgat 109  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  34176838 caaaggcatggtaatatgtgtttgaaagagaaaggaaaactatagaaatgagaggaaataactgcaacatcaatcacattcatcactgccgcaaatcgat 34176937  T
Q  110 ctacgtcgtagttaccatcatctttggccagagcaccgccgcgagcagctccttcctccagcgaccaccacgtgcactaccgattccgtctggattgagg 209  Q
    ||||||||  |||||| |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  34176938 ctacgtcgccgttaccgtcatctttggccagagcaccgccgcgagcaactccttcctccagcaaccaccacgtgcactactgattccgtctggattgagg 34177037  T
Q  210 tttcatcttccttctcctttattggttcactttcttttttcactatcgctttgctgcatgtgttctgtttggaaacttgaagaaaaagaatgaagcaggg 309  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34177038 tttcatcttccttctcctttattggttcactttcttttttcactatcgctttgctgcatgtgttctgtttggaaacttgaagaaaaagaatgaagcaggg 34177137  T
Q  310 agatggatgatttctcagagaagaaaataatgaattaggtttctcaagggaagcttgaaggagtgaagaagattaatttgagggtatttttgtccattcc 409  Q
    |||| |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34177138 agattgatgatttctcagagaagaaaataatgaattaggtttctc-agagaagcttgaaggagtgaagaagattaatttgagggtatttttgtccattcc 34177236  T
Q  410 catgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattag 509  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||| | |||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  34177237 catgccattttgctaatttgatgatgtggcagtcattaagtgggtcaagggacgaaattttaaatgattaaagaatgcaaggctagtttacaaggattag 34177336  T
Q  510 cgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaagtnnnnnnngtaacacatgcacatggtcatctcaataaaat 609  Q
    ||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||       ||||||||||| ||||||||||||||||||||    
T  34177337 cgaatacaaggaccaatttttaaacgacccctaattacaaagatgaaatacatatttaagtcaaaaaagtaacacatgcccatggtcatctcaataaaat 34177436  T
Q  610 tgaaggtctatctaaaatattaaaaacgatcccatgttcaaagatcaatcaatagttta 668  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34177437 tgaaggtctatctaaaatattaaaaacgatcccatgttcaaagatcaatcaatagttta 34177495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 388 - 569
Target Start/End: Complemental strand, 7294284 - 7294104
Alignment:
Q  388 tgagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgc 487  Q
    ||||| |||||||||||||||  |||||||||||||||||||||||| |  |||| |||||  ||||||||| | |||||||||||| ||||||||||||    
T  7294284 tgaggttatttttgtccattcttatgccattttgctaatttgatgatctgacagtgattaactgggtcaaaggatgaaattttaaatgattaaagaatgc 7294185  T
Q  488 aagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    ||| |||||||||||||||||||||||| | ||| ||||||||||| |||| |||||| ||| |||||||||||||||||||    
T  7294184 aaggctagtttacaaggattagcgaatatagagatcaatttttaaacgacctctaattgcaa-gatgaaatacatatttaag 7294104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 388 - 565
Target Start/End: Original strand, 2535795 - 2535972
Alignment:
Q  388 tgagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgc 487  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||||| | |||||||||||||| ||||||   ||     
T  2535795 tgagtgtatttttgtccattcccatgccattttactaatttgatgatgtggcagtcattaagtgggtcaagggacgaaattttaaatgattaaactttgt 2535894  T
Q  488 aagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatt 565  Q
    |||  || ||| | ||||||| ||| ||||  |||||||||||||||||||||||||| || ||| ||||||||||||    
T  2535895 aagggtaatttgccaggattaacgattacagggaccaatttttaaatgacccctaattgcagggacgaaatacatatt 2535972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 391 - 568
Target Start/End: Complemental strand, 34176621 - 34176448
Alignment:
Q  391 gggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaag 490  Q
    |||||||||||||| |||||| |||||||||||||||||||||  |  |||| |||||  ||||||||| | |||||||||||| |||||||||||||||    
T  34176621 gggtatttttgtcctttcccaagccattttgctaatttgatgacctgacagtgattaactgggtcaaaggatgaaattttaaatgattaaagaatgcaag 34176522  T
Q  491 actagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaa 568  Q
    |||||||| ||||||||| |||||| |   ||||||||||||| || || ||||| ||||||||||||||||||||||    
T  34176521 actagtttgcaaggattaacgaatata---accaatttttaaacga-ccataattgcaaggatgaaatacatatttaa 34176448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 438 - 568
Target Start/End: Original strand, 38862858 - 38862988
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  |||||||| |||||||||||||| ||||| || |||||| ||||||| |||||||||||||||||| ||||||||||||||| |||    
T  38862858 gcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacagagaccaatttttaaacgac 38862957  T
Q  538 ccctaattacaaggatgaaatacatatttaa 568  Q
    |||||||| ||||||||||||||||||||||    
T  38862958 ccctaattgcaaggatgaaatacatatttaa 38862988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 389 - 562
Target Start/End: Original strand, 10445579 - 10445752
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| || ||||| ||||||  |||||||  |||||||||||||| |||||| ||||||    
T  10445579 gagggtatttttgtccatttccatgccattttgctaatttgatgacgtggcagtgattaagttggtcaaaagacgaaattttaaatgattaaacaatgca 10445678  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    ||  ||  || | ||||||||||| ||||  ||| |||||||||||||| ||||||| |||||| |||| ||||    
T  10445679 agggtaaattgccaggattagcgattacagggactaatttttaaatgacacctaattgcaaggacgaaacacat 10445752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 389 - 552
Target Start/End: Original strand, 15230175 - 15230338
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||  |||||||| |||||||||||||| |||||| ||||||    
T  15230175 gagggtatttttgtccattcccatgccattttgctaatttgatgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaatgca 15230274  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaagga 552  Q
    ||  ||  ||   | ||||||||| ||||  ||| |||||||||||||| ||||||| ||||||    
T  15230275 agggtaaattgtcaagattagcgattacagggactaatttttaaatgacacctaattgcaagga 15230338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 391 - 569
Target Start/End: Complemental strand, 2534875 - 2534697
Alignment:
Q  391 gggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaag 490  Q
    ||||||||||||| ||| |||| ||||||||||||||||||||||| ||||| |||||  |||   | | |||||||||||||| |||||| ||||||||    
T  2534875 gggtatttttgtcaatttccataccattttgctaatttgatgatgtggcagtgattaactgggaatagggacgaaattttaaatgattaaacaatgcaag 2534776  T
Q  491 actagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    | |||||| ||||||||||||| ||||   ||||||||||||| ||||| ||||| || ||  ||||||||||||||||    
T  2534775 agtagtttgcaaggattagcgattacatgtaccaatttttaaacgacccataattgcagggtcgaaatacatatttaag 2534697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 389 - 562
Target Start/End: Original strand, 25124807 - 25124980
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| || ||||| ||||||  | |||||| | |||||||||||| |||||| ||||||    
T  25124807 gagggtatttttgtccattcccatgtcattttgctaatttgatgacgtggcagtgattaagttgttcaaaggatgaaattttaaatgattaaacaatgca 25124906  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    ||  ||  || | || |||||||| |||| |||| |||||||||||||| ||||||| |||||| |||| ||||    
T  25124907 agggtaaattgccagaattagcgattacagagactaatttttaaatgacacctaattgcaaggacgaaacacat 25124980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 461 - 569
Target Start/End: Complemental strand, 20385678 - 20385570
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| ||||| || |||||||||||||| ||||||||||||||||||  |||||||||||||| ||||||||||| ||||||| ||||||    
T  20385678 acgaaattttaaatgattaatgattgcaagactagtttgcaaggattagcgaatacagggaccaatttttaaacgacccctaattgcaaggatcaaatac 20385579  T
Q  561 atatttaag 569  Q
    |||||||||    
T  20385578 atatttaag 20385570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 439 - 567
Target Start/End: Complemental strand, 36186233 - 36186105
Alignment:
Q  439 cagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacc 538  Q
    |||| ||||||  |||||||  |||||||||||||||||||| || ||||| |||||||| ||||||||||||||||||  |||||| ||||||| ||||    
T  36186233 cagtgattaagttggtcaaaagacgaaattttaaataattaatgattgcaatactagtttgcaaggattagcgaatacagggaccaaattttaaaagacc 36186134  T
Q  539 cctaattacaaggatgaaatacatattta 567  Q
    ||||||||||| |||||||||||||||||    
T  36186133 cctaattacaaagatgaaatacatattta 36186105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 389 - 569
Target Start/End: Complemental strand, 44664690 - 44664510
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    |||| ||||||||||||||||| |||||||||||||||||||||| || ||||| ||||||  |||||||  |||||||||||||| |||||| ||||||    
T  44664690 gaggatatttttgtccattcccgtgccattttgctaatttgatgacgtggcagtgattaagttggtcaaatgacgaaattttaaatgattaaacaatgca 44664591  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    ||  ||  || | ||||||| ||| ||||  ||| |||||||||||||| ||||||| |||||| |||| ||||| |||||    
T  44664590 aggttaaattgccaggattaacgattacagggactaatttttaaatgacgcctaattgcaaggacgaaacacataattaag 44664510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 438 - 569
Target Start/End: Complemental strand, 8316786 - 8316655
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  |||||||| |||||||||||||| ||||| || |||||| ||||||| ||||||||| ||||||||  |||||||||||||| |||    
T  8316786 gcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattaacgaatacatggaccaatttttaaacgac 8316687  T
Q  538 ccctaattacaaggatgaaatacatatttaag 569  Q
    |||||||| |||||||||||| ||||||||||    
T  8316686 ccctaattgcaaggatgaaatgcatatttaag 8316655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 454 - 569
Target Start/End: Original strand, 38955983 - 38956098
Alignment:
Q  454 tcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggat 553  Q
    |||||| || ||||||||||| ||||| || |||||| ||||||||||||||||||||||||||  |||||||||||||| ||||||||||| |||||||    
T  38955983 tcaaaggactaaattttaaatgattaatgattgcaaggctagtttacaaggattagcgaatacagggaccaatttttaaacgacccctaattgcaaggat 38956082  T
Q  554 gaaatacatatttaag 569  Q
     |||||||||||||||    
T  38956083 caaatacatatttaag 38956098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 438 - 569
Target Start/End: Complemental strand, 40318097 - 40317966
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  |||||||  ||| |||||||||| ||||| || |||||| ||||||| |||||||||||||||||| |||| |||||||||| |||    
T  40318097 gcagtgattaagttggtcaaatgacgcaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacagagacaaatttttaaacgac 40317998  T
Q  538 ccctaattacaaggatgaaatacatatttaag 569  Q
    |||||||| |||||||||||||||||||||||    
T  40317997 ccctaattgcaaggatgaaatacatatttaag 40317966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 388 - 562
Target Start/End: Original strand, 35634342 - 35634516
Alignment:
Q  388 tgagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgc 487  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||  |||| ||||||  ||| |||| |||||||||||||| |||||| |||||    
T  35634342 tgagggtatttttgtccattcccatgccattttgctaatttgatgacgtgacagtgattaagttggttaaaggacgaaattttaaatgattaaacaatgc 35634441  T
Q  488 aagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    |||  ||  ||   ||||||||||| ||||  ||| |||||||||||||| | ||||| |||||| |||| ||||    
T  35634442 aagggtaaattgtcaggattagcgattacagggactaatttttaaatgacgcttaattgcaaggacgaaacacat 35634516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 452 - 569
Target Start/End: Complemental strand, 12199069 - 12198952
Alignment:
Q  452 ggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaagg 551  Q
    |||||||| |||||||||||||| ||||| || |||||||||||||| ||||||||||||| || |  |||||||||||||| ||||||||||| |||||    
T  12199069 ggtcaaaggacgaaattttaaatgattaatgattgcaagactagtttgcaaggattagcgattatagggaccaatttttaaacgacccctaattgcaagg 12198970  T
Q  552 atgaaatacatatttaag 569  Q
    || |||||||||||||||    
T  12198969 atcaaatacatatttaag 12198952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 452 - 569
Target Start/End: Complemental strand, 12443497 - 12443380
Alignment:
Q  452 ggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaagg 551  Q
    |||||||| |||||||||||||| ||||| || |||||||||||||| ||||||||||||| || |  |||||||||||||| ||||||||||| |||||    
T  12443497 ggtcaaaggacgaaattttaaatgattaatgattgcaagactagtttgcaaggattagcgattatagggaccaatttttaaacgacccctaattgcaagg 12443398  T
Q  552 atgaaatacatatttaag 569  Q
    || |||||||||||||||    
T  12443397 atcaaatacatatttaag 12443380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 389 - 562
Target Start/End: Original strand, 44664752 - 44664925
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||  | ||| | ||||||  ||||||| ||||||||||||||| |||||| ||||||    
T  44664752 gaggatatttttgtccattcccatgccattttgctaatctgatgacttggcaatgattaagttggtcaaataacgaaattttaaatgattaaacaatgca 44664851  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    ||  ||  ||   ||||||||||| |||| |||| |||||||||||||| ||||||| |||||| |||| ||||    
T  44664852 agggtaaattgtcaggattagcgattacagagactaatttttaaatgacgcctaattgcaaggacgaaacacat 44664925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 438 - 568
Target Start/End: Original strand, 7295222 - 7295352
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||||||| |  ||||||||| | |||||||||||  ||||||||||||||||||||||| ||||||||||||||||||  |||| ||||||||| ||     
T  7295222 gcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaagactagtttgcaaggattagcgaatacagggaccgatttttaaacgat 7295321  T
Q  538 ccctaattacaaggatgaaatacatatttaa 568  Q
    || ||||| ||||||| ||||||||||||||    
T  7295322 ccataattgcaaggataaaatacatatttaa 7295352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 452 - 570
Target Start/End: Complemental strand, 12273037 - 12272919
Alignment:
Q  452 ggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaagg 551  Q
    |||||||| |||||||||||||| |||||  | |||||| ||||||| ||||||||||||| |||| ||||||||||||||| || |||||||| |||||    
T  12273037 ggtcaaaggacgaaattttaaatgattaataattgcaaggctagtttgcaaggattagcgattacagagaccaatttttaaacgatccctaattgcaagg 12272938  T
Q  552 atgaaatacatatttaagt 570  Q
    || ||||||||||||||||    
T  12272937 atcaaatacatatttaagt 12272919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 452 - 569
Target Start/End: Complemental strand, 4994776 - 4994659
Alignment:
Q  452 ggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaagg 551  Q
    |||||||  |||||||||||||||||||| || |||||| ||||||| |||||||||||||||||| ||| |||||||||||  | |||||||| ||| |    
T  4994776 ggtcaaaagacgaaattttaaataattaatgattgcaaggctagtttccaaggattagcgaatacagagatcaatttttaaacaatccctaattgcaacg 4994677  T
Q  552 atgaaatacatatttaag 569  Q
    ||||||||||||||||||    
T  4994676 atgaaatacatatttaag 4994659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 452 - 569
Target Start/End: Original strand, 13186368 - 13186485
Alignment:
Q  452 ggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaagg 551  Q
    |||||||  |||||||||||||| ||||| || |||||| ||||||| ||||||||||||||||||   ||||||||||||| ||||||||||| |||||    
T  13186368 ggtcaaatgacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacatgaaccaatttttaaacgacccctaattgcaagg 13186467  T
Q  552 atgaaatacatatttaag 569  Q
    |||||||| |||||||||    
T  13186468 atgaaatatatatttaag 13186485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 389 - 562
Target Start/End: Complemental strand, 37542406 - 37542233
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    |||||||||||||| |||||||||||||||||| |||||||||||  | || || ||||||  ||||||||||||||||||||||| |||||| ||||||    
T  37542406 gagggtatttttgttcattcccatgccattttgttaatttgatgacttggcggtgattaagttggtcaaagaacgaaattttaaatgattaaacaatgca 37542307  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    ||  ||  || | ||||||||||| || |  ||| |||||||||||||| ||||||| ||| || |||| ||||    
T  37542306 agggtaaattgccaggattagcgattaaagggactaatttttaaatgacgcctaattgcaaagacgaaacacat 37542233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 389 - 490
Target Start/End: Complemental strand, 39474727 - 39474627
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||  |||||||| |||||||||||||| |||||| ||||||    
T  39474727 gagggtatttttgtccatttccatgccattttgctaatttgatgatgtggcagtgattaagttggtcaaag-acgaaattttaaatgattaaacaatgca 39474629  T
Q  489 ag 490  Q
    ||    
T  39474628 ag 39474627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 389 - 550
Target Start/End: Original strand, 42945358 - 42945519
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    |||||||||||||||||||||||||||||||| ||||||||||||  | ||||| ||||||  |||||||  |||||||||||||| |||||| ||||||    
T  42945358 gagggtatttttgtccattcccatgccattttactaatttgatgacttggcagtgattaagttggtcaaatgacgaaattttaaatgattaaacaatgca 42945457  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaag 550  Q
    ||| ||  ||   ||||||||||| ||||   || |||||||||||||| ||||||| ||||    
T  42945458 agagtaaattgtcaggattagcgattacaggaactaatttttaaatgacgcctaattgcaag 42945519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 452 - 568
Target Start/End: Complemental strand, 1425172 - 1425056
Alignment:
Q  452 ggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaagg 551  Q
    |||||||| || ||||||||||| ||||| || |||||| ||||||| |||||||||| |||||||  |||||||||||||| ||||||||||| |||||    
T  1425172 ggtcaaaggactaaattttaaatgattaatgattgcaaggctagtttgcaaggattagtgaatacagggaccaatttttaaacgacccctaattgcaagg 1425073  T
Q  552 atgaaatacatatttaa 568  Q
    || ||||||||||||||    
T  1425072 atcaaatacatatttaa 1425056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 388 - 552
Target Start/End: Complemental strand, 15230114 - 15229950
Alignment:
Q  388 tgagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgc 487  Q
    |||||||||||||||||||||||||||||||||||||||||||| |  | | ||| ||||||  | |||||| |||||||||||||| |||||| ||| |    
T  15230114 tgagggtatttttgtccattcccatgccattttgctaatttgataacttggtagtgattaagttgatcaaaggacgaaattttaaatgattaaacaatcc 15230015  T
Q  488 aagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaagga 552  Q
    |||  ||  || | ||||||||||| ||||  ||| |||||||||||||| ||||||| ||||||    
T  15230014 aagggtaaattgccaggattagcgattacagggactaatttttaaatgacgcctaattgcaagga 15229950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 433 - 569
Target Start/End: Original strand, 39071932 - 39072067
Alignment:
Q  433 atgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaa 532  Q
    |||| ||||| ||||||  |||||||| |||||||||||||| ||||| || |||||| ||||||| ||||||||| ||||||||  |||||||||||||    
T  39071932 atgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggatta-cgaatacagggaccaatttttaa 39072030  T
Q  533 atgacccctaattacaaggatgaaatacatatttaag 569  Q
    | ||||| | ||| |||||||||||||||||||||||    
T  39072031 acgacccttgattgcaaggatgaaatacatatttaag 39072067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 438 - 569
Target Start/End: Complemental strand, 23663678 - 23663547
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  |||||||| |||||||||||||| ||||| || | ||||  |||||| ||||||||| ||||||||  |||||||||||||| |||    
T  23663678 gcagtgattaagttggtcaaaggacgaaattttaaatgattaatgatttcaaggttagtttccaaggattaacgaatacagggaccaatttttaaacgac 23663579  T
Q  538 ccctaattacaaggatgaaatacatatttaag 569  Q
    |||||||| |||||||||||| ||||||||||    
T  23663578 ccctaattgcaaggatgaaatgcatatttaag 23663547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 438 - 569
Target Start/End: Original strand, 36928771 - 36928902
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  |||||||| |||||||||||||| ||||| || |||||| ||||||| ||||||||||| |||||| ||||||||||||||| ||     
T  36928771 gcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcaaatacatagaccaatttttaaacgat 36928870  T
Q  538 ccctaattacaaggatgaaatacatatttaag 569  Q
      |||||| ||| |||||||||||||||||||    
T  36928871 atctaattgcaacgatgaaatacatatttaag 36928902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 439 - 569
Target Start/End: Original strand, 34685554 - 34685683
Alignment:
Q  439 cagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacc 538  Q
    |||| ||||||  |||||||  |||||||||||||| ||||| || || ||| ||||||| ||||||||||||||||| |||||||||||||||| || |    
T  34685554 cagtgattaagttggtcaaatgacgaaattttaaatgattaatgattgtaaggctagtttgcaaggattagcgaatac-aagaccaatttttaaacgatc 34685652  T
Q  539 cctaattacaaggatgaaatacatatttaag 569  Q
    ||||||| ||||||| |||||||||||||||    
T  34685653 cctaattgcaaggataaaatacatatttaag 34685683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 393 - 562
Target Start/End: Complemental strand, 25124741 - 25124572
Alignment:
Q  393 gtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagac 492  Q
    ||||||||||| ||||||||  |||||||||||||||||||  | |||||  |||||  |||||||| |||||||||||||| |||||| ||||||||      
T  25124741 gtatttttgtcaattcccatatcattttgctaatttgatgacttggcagtggttaagttggtcaaaggacgaaattttaaatgattaaacaatgcaaggg 25124642  T
Q  493 tagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    ||  || | ||||||||||| ||||  ||| |||||||||||||| ||||||| |||| | |||||||||    
T  25124641 taaattgccaggattagcgattacatggactaatttttaaatgacgcctaattgcaagaacgaaatacat 25124572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 461 - 569
Target Start/End: Original strand, 20386748 - 20386856
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||  | ||| || ||||||| ||||||||||||||||||  |||||||||||||| ||||||||||| ||||||| ||||||    
T  20386748 acgaaattttaaatgattaataattgcgaggctagtttgcaaggattagcgaatacagggaccaatttttaaacgacccctaattgcaaggatcaaatac 20386847  T
Q  561 atatttaag 569  Q
    |||||||||    
T  20386848 atatttaag 20386856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 452 - 553
Target Start/End: Original strand, 35756891 - 35756993
Alignment:
Q  452 ggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatga-cccctaattacaag 550  Q
    |||||||| |||||||||||||| ||||| || |||||||||||||| ||||||||| |||||||| ||||||||||||||| || ||||||||| ||||    
T  35756891 ggtcaaaggacgaaattttaaatgattaatgattgcaagactagtttgcaaggattaacgaatacagagaccaatttttaaacgaccccctaattgcaag 35756990  T
Q  551 gat 553  Q
    |||    
T  35756991 gat 35756993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 389 - 562
Target Start/End: Complemental strand, 6471872 - 6471699
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    |||| ||||||| |||||||||||| ||||||||||||||||||| || ||||| ||||||  | | |||  |||||||||||||| |||||| ||||||    
T  6471872 gaggatatttttatccattcccatgtcattttgctaatttgatgacgtggcagtgattaagttgataaaaagacgaaattttaaatgattaaacaatgca 6471773  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    ||  ||  || | ||||||||||| || | ||||  ||||||||||||| ||||||| |||||| |||| ||||    
T  6471772 agggtaaattgccaggattagcgattatagagactcatttttaaatgacgcctaattgcaaggacgaaacacat 6471699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 452 - 569
Target Start/End: Original strand, 34061637 - 34061754
Alignment:
Q  452 ggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaagg 551  Q
    |||||||| |||||||||||||| |||||||||||||||   | ||| ||||||||||||||||||  || ||||||||||| |||  |||||| |||||    
T  34061637 ggtcaaaggacgaaattttaaatgattaaagaatgcaagggcaatttgcaaggattagcgaatacatggatcaatttttaaacgacgtctaattgcaagg 34061736  T
Q  552 atgaaatacatatttaag 569  Q
    ||| ||||||||||||||    
T  34061737 atgcaatacatatttaag 34061754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 461 - 569
Target Start/End: Original strand, 8316906 - 8317014
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| ||||||||  ||  || | ||||||||||| ||||| |||||||||||||| ||||||||||| ||||||| ||||||    
T  8316906 acgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcgattacaaggaccaatttttaaacgacccctaattgcaaggatcaaatac 8317005  T
Q  561 atatttaag 569  Q
    |||||||||    
T  8317006 atatttaag 8317014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 461 - 569
Target Start/End: Original strand, 23663832 - 23663940
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| ||||||||  ||  || | ||||||||||| |||| ||||||||||||||| ||||||||||| ||||||| ||||||    
T  23663832 acgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcgattacagagaccaatttttaaacgacccctaattgcaaggatcaaatac 23663931  T
Q  561 atatttaag 569  Q
    |||||||||    
T  23663932 atatttaag 23663940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 461 - 569
Target Start/End: Original strand, 23698562 - 23698670
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| ||||||||  ||  || | ||||||||||| ||||  |||||||||||||| ||||||||||||||||||| ||||||    
T  23698562 acgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcgattacagggaccaatttttaaacgacccctaattacaaggatcaaatac 23698661  T
Q  561 atatttaag 569  Q
    |||||||||    
T  23698662 atatttaag 23698670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 389 - 481
Target Start/End: Complemental strand, 42945296 - 42945204
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaa 481  Q
    |||||||||||||||||||||||||||||||| ||||||||||||  | ||||| ||||||  |||||||| |||||||||||||| ||||||    
T  42945296 gagggtatttttgtccattcccatgccattttactaatttgatgacttggcagtgattaagttggtcaaaggacgaaattttaaatgattaaa 42945204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 399 - 562
Target Start/End: Original strand, 8997943 - 8998106
Alignment:
Q  399 ttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagttt 498  Q
    ||||||||||||||||||||||||||||||||||| ||  |||| ||||||  |||||||| ||| |||||||||| |||||| ||||||||  ||  ||    
T  8997943 ttgtccattcccatgccattttgctaatttgatgacgtgacagtgattaagttggtcaaaggacggaattttaaatgattaaacaatgcaagggtaaatt 8998042  T
Q  499 acaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
       | ||||||||| ||||   || |||||||||||||| ||||||| |||||| |||| ||||    
T  8998043 gtcatgattagcgattacatgaactaatttttaaatgacgcctaattgcaaggacgaaacacat 8998106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 392 - 562
Target Start/End: Original strand, 41353820 - 41353990
Alignment:
Q  392 ggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaaga 491  Q
    ||||||||||||||||| |||| ||||||||||||||||||| ||  | || ||||||  |||||||| |||||||||||||| |||||| ||||| ||     
T  41353820 ggtatttttgtccattctcatgtcattttgctaatttgatgacgtgacggtgattaagttggtcaaaggacgaaattttaaatgattaaataatgctagg 41353919  T
Q  492 ctagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
     ||  ||   |||||||| || ||||  ||| |||||||||||||| |||||||| ||||| |||| ||||    
T  41353920 gtaaattgtcaggattagtgattacagggactaatttttaaatgacgcctaattataaggacgaaacacat 41353990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 488 - 569
Target Start/End: Complemental strand, 33357581 - 33357500
Alignment:
Q  488 aagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    |||||| |||| ||||||||||||||||||  || ||||||||||| ||||||||||| |||||||||||||||||||||||    
T  33357581 aagactggtttgcaaggattagcgaatacatggatcaatttttaaacgacccctaattgcaaggatgaaatacatatttaag 33357500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 389 - 490
Target Start/End: Complemental strand, 38003637 - 38003536
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    ||||||||||||||||||| | || ||||||||||||||||||||  ||| ||| ||||||  ||||||||||||||||||||||| |||||| ||| ||    
T  38003637 gagggtatttttgtccatttctataccattttgctaatttgatgacttagtagtgattaagttggtcaaagaacgaaattttaaatgattaaacaataca 38003538  T
Q  489 ag 490  Q
    ||    
T  38003537 ag 38003536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 461 - 569
Target Start/End: Original strand, 4405978 - 4406086
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| | ||||||  ||  || ||||||||| | ||||||  ||||||||||||||  |||||||||||||||||||||||||    
T  4405978 acgaaattttaaatgattaaacattgcaagggtaaattgcaaggattaacaaatacatggaccaatttttaaacaacccctaattacaaggatgaaatac 4406077  T
Q  561 atatttaag 569  Q
    |||||||||    
T  4406078 atatttaag 4406086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 393 - 569
Target Start/End: Complemental strand, 7983606 - 7983430
Alignment:
Q  393 gtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagac 492  Q
    |||||||||||||||  |||| |||||| ||||||||||||  | | ||| ||||||    |||||| |||||||||||||| |||||| ||||||||      
T  7983606 gtatttttgtccattttcatgtcatttttctaatttgatgactttgtagtgattaagtttttcaaaggacgaaattttaaatgattaaacaatgcaaggg 7983507  T
Q  493 tagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    ||  || | ||||||||||| ||||  ||| |||||||||||||| ||||||| |||||| |||| ||||| |||||    
T  7983506 taaattgccaggattagcgattacagggactaatttttaaatgacgcctaattgcaaggacgaaacacataattaag 7983430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 461 - 569
Target Start/End: Original strand, 16388844 - 16388952
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| ||||||||  ||  || | ||||||||| | ||||   ||||||||||||||||||||||||| ||||||||||||||    
T  16388844 acgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcaattacatgaaccaatttttaaatgacccctaattgcaaggatgaaatac 16388943  T
Q  561 atatttaag 569  Q
    |||||||||    
T  16388944 atatttaag 16388952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 461 - 569
Target Start/End: Original strand, 30712035 - 30712142
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| ||||| || |||||| ||||||| ||||||||||| ||||| | |||||||||||||| | ||||||||  ||||||| ||||||    
T  30712035 acgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcaaatac-aggaccaatttttaaacggcccctaatcgcaaggatcaaatac 30712133  T
Q  561 atatttaag 569  Q
    |||||||||    
T  30712134 atatttaag 30712142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 461 - 569
Target Start/End: Original strand, 30719812 - 30719919
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| ||||| || |||||| ||||||| ||||||||||| ||||| | |||||||||||||| | ||||||||  ||||||| ||||||    
T  30719812 acgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcaaatac-aggaccaatttttaaacggcccctaatcgcaaggatcaaatac 30719910  T
Q  561 atatttaag 569  Q
    |||||||||    
T  30719911 atatttaag 30719919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 461 - 569
Target Start/End: Original strand, 31608831 - 31608939
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||| | ||||||||  ||  || ||||||||||||||||||  |||||||||||||| ||||| ||||| ||||||||||||||    
T  31608831 acgaaattttaaatgattagacaatgcaagggtaaattgcaaggattagcgaatacatggaccaatttttaaacgacccttaattgcaaggatgaaatac 31608930  T
Q  561 atatttaag 569  Q
     ||||||||    
T  31608931 ttatttaag 31608939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 461 - 569
Target Start/End: Complemental strand, 39071786 - 39071678
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| ||||||||  ||  ||   ||||||||||| ||||  |||||||||||||| ||||||||||| ||||||||||||||    
T  39071786 acgaaattttaaatgattaaacaatgcaagggtaaattgtcaggattagcgattacagggaccaatttttaaacgacccctaattgcaaggatgaaatac 39071687  T
Q  561 atatttaag 569  Q
    |||||||||    
T  39071686 atatttaag 39071678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 452 - 569
Target Start/End: Complemental strand, 23698428 - 23698310
Alignment:
Q  452 ggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatga-cccctaattacaag 550  Q
    |||||||| |||||||||||| | ||||| || |||||| ||||||| |||| |||||||| ||||  ||| |||||||||| || ||||||||| ||||    
T  23698428 ggtcaaaggacgaaattttaactgattaatgattgcaaggctagtttgcaagaattagcgattacagggactaatttttaaacgaccccctaattgcaag 23698329  T
Q  551 gatgaaatacatatttaag 569  Q
    ||| |||||||||||||||    
T  23698328 gatcaaatacatatttaag 23698310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 389 - 562
Target Start/End: Original strand, 37542469 - 37542642
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    ||||||||||||||||||||  ||| |||||||||||||  |||| || | ||| ||||||  |||||||| |||||||||||||| |||||| ||||||    
T  37542469 gagggtatttttgtccattctaatgtcattttgctaattcaatgacgttggagtgattaagttggtcaaaggacgaaattttaaatgattaaacaatgca 37542568  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    ||  ||  |||  || |||| |||  |||   ||||||||||||||||| |||||||  |||||||||| ||||    
T  37542569 agggtaaattatcagaattaacgataacaggaaccaatttttaaatgacgcctaattgtaaggatgaaacacat 37542642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 461 - 569
Target Start/End: Original strand, 4994975 - 4995082
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    ||||||||| |||| |||||| ||||||||  ||  ||   ||||||||||| ||||  |||||||||||||||||||||||||| ||||||||||||||    
T  4994975 acgaaatttgaaatgattaaacaatgcaagggtaaattgtcaggattagcgattacag-gaccaatttttaaatgacccctaattgcaaggatgaaatac 4995073  T
Q  561 atatttaag 569  Q
    |||||||||    
T  4995074 atatttaag 4995082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 461 - 569
Target Start/End: Original strand, 40318282 - 40318390
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| ||||||||  ||  || | ||||||||||| ||||  ||| ||||||||||  |||||||||| ||||||||||||||    
T  40318282 acgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcgattacatggactaatttttaaacaacccctaattgcaaggatgaaatac 40318381  T
Q  561 atatttaag 569  Q
    |||||||||    
T  40318382 atatttaag 40318390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 459 - 570
Target Start/End: Original strand, 43181468 - 43181579
Alignment:
Q  459 gaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaat 558  Q
    |||||||||||||||| |||||| |||| ||| ||| ||||||||||||| ||| | ||  || ||||||||||| || |||||||||||| || |||||    
T  43181468 gaacgaaattttaaatgattaaacaatgtaaggctaatttacaaggattaacgattgcatggatcaatttttaaacgatccctaattacaaagacgaaat 43181567  T
Q  559 acatatttaagt 570  Q
    ||||||| ||||    
T  43181568 acatattaaagt 43181579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 500 - 570
Target Start/End: Original strand, 12199263 - 12199333
Alignment:
Q  500 caaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaagt 570  Q
    ||||||||||||| ||||| |||||||||||||| ||| |||||||| |||||| ||||||||||||||||    
T  12199263 caaggattagcgattacaaggaccaatttttaaacgactcctaattataaggatcaaatacatatttaagt 12199333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 500 - 570
Target Start/End: Original strand, 12443691 - 12443761
Alignment:
Q  500 caaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaagt 570  Q
    ||||||||||||| ||||| |||||||||||||| ||| |||||||| |||||| ||||||||||||||||    
T  12443691 caaggattagcgattacaaggaccaatttttaaacgactcctaattataaggatcaaatacatatttaagt 12443761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 392 - 490
Target Start/End: Complemental strand, 21432872 - 21432774
Alignment:
Q  392 ggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaag 490  Q
    |||||||||||||||| |||||||||||||||||||||||||  | | ||| ||||||   ||||||  |||||||||||||| |||||| ||||||||    
T  21432872 ggtatttttgtccatttccatgccattttgctaatttgatgacttgggagtgattaagttagtcaaaagacgaaattttaaatgattaaacaatgcaag 21432774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 467 - 569
Target Start/End: Complemental strand, 30459475 - 30459373
Alignment:
Q  467 ttttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatattt 566  Q
    |||||| | ||||||||||||||   || ||| |||||||||| ||||||| |||| |||||||||| ||| |||||||  |||||||||||||||||||    
T  30459475 ttttaagtgattaaagaatgcaattgtaatttgcaaggattagtgaatacatagactaatttttaaacgacgcctaattgtaaggatgaaatacatattt 30459376  T
Q  567 aag 569  Q
    |||    
T  30459375 aag 30459373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 463 - 569
Target Start/End: Complemental strand, 38955811 - 38955705
Alignment:
Q  463 gaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    |||||||||||| |||||| |||||| |  ||  |||| ||||||||||| ||||| |||||||||||||| || ||| |||| ||||||| ||||||||    
T  38955811 gaaattttaaatgattaaacaatgcaggggtaaattaccaggattagcgattacaatgaccaatttttaaacgatccccaattgcaaggatcaaatacat 38955712  T
Q  563 atttaag 569  Q
    |||||||    
T  38955711 atttaag 38955705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 389 - 490
Target Start/End: Original strand, 21432937 - 21433038
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    |||||||||||| |||||||||||| ||||||||||||||||| | ||  |||| ||||||  |||||||| |||| ||| ||||| |||||| ||||||    
T  21432937 gagggtatttttatccattcccatgtcattttgctaatttgataacgtgtcagtgattaagttggtcaaaggacgacattgtaaatgattaaacaatgca 21433036  T
Q  489 ag 490  Q
    ||    
T  21433037 ag 21433038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 452 - 561
Target Start/End: Complemental strand, 22915508 - 22915399
Alignment:
Q  452 ggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaagg 551  Q
    |||||||  |||||||| ||||| ||||| || |||||| ||||||| ||||||||||||| ||||  ||||||||||||||||| | |||||| ||||     
T  22915508 ggtcaaaagacgaaattgtaaatgattaatgattgcaaggctagtttgcaaggattagcgattacatggaccaatttttaaatgatctctaattgcaaga 22915409  T
Q  552 atgaaataca 561  Q
    || |||||||    
T  22915408 atcaaataca 22915399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 461 - 569
Target Start/End: Complemental strand, 13186170 - 13186062
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| ||||||||  ||  ||   ||||||||||| ||||   ||||||||||||| || |||||||| ||||||||||||||    
T  13186170 acgaaattttaaatgattaaacaatgcaagggtaaattgtcaggattagcgattacatgaaccaatttttaaacgatccctaattgcaaggatgaaatac 13186071  T
Q  561 atatttaag 569  Q
    |||||||||    
T  13186070 atatttaag 13186062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 391 - 447
Target Start/End: Original strand, 34214448 - 34214504
Alignment:
Q  391 gggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcatta 447  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||||    
T  34214448 gggtatttttgtcaattcccatgccattttgctaatttgatgatgtggcagtgatta 34214504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 467 - 569
Target Start/End: Complemental strand, 34060593 - 34060491
Alignment:
Q  467 ttttaaataattaaagaatgcaa-gactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatt 565  Q
    |||||||| |||||||||||||| ||| | ||| ||||||||||||| ||||  |||||||||||||| |||   ||||| |||||||||||||||||||    
T  34060593 ttttaaatgattaaagaatgcaacgacaa-tttgcaaggattagcgattacatggaccaatttttaaacgacgtttaattgcaaggatgaaatacatatt 34060495  T
Q  566 taag 569  Q
    ||||    
T  34060494 taag 34060491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 520 - 570
Target Start/End: Complemental strand, 9065716 - 9065666
Alignment:
Q  520 gaccaatttttaaatgacccctaattacaaggatgaaatacatatttaagt 570  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  9065716 gaccaatttttaaacgacccctaattacaaagatgaaatacatatttaagt 9065666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 391 - 453
Target Start/End: Complemental strand, 34213944 - 34213882
Alignment:
Q  391 gggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcggg 453  Q
    ||||||||||||| ||||||||||||||||||||||||||||| || ||||| ||||| ||||    
T  34213944 gggtatttttgtcaattcccatgccattttgctaatttgatgacgtggcagtgattaaccggg 34213882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 389 - 490
Target Start/End: Original strand, 6471934 - 6472035
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    ||||||||||||||| |||||||||| |||||| ||||||||| |  | | ||| ||||||  |||||||| || ||||||||||| |||||| ||||||    
T  6471934 gagggtatttttgtcaattcccatgctattttgttaatttgataacttggtagtgattaagttggtcaaaggacaaaattttaaatgattaaacaatgca 6472033  T
Q  489 ag 490  Q
    ||    
T  6472034 ag 6472035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 391 - 448
Target Start/End: Complemental strand, 11762020 - 11761963
Alignment:
Q  391 gggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaa 448  Q
    |||||||||||||||||||||||| |||||||||||||||||| || ||||| |||||    
T  11762020 gggtatttttgtccattcccatgctattttgctaatttgatgacgtggcagtgattaa 11761963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 504 - 569
Target Start/End: Complemental strand, 16388650 - 16388585
Alignment:
Q  504 gattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    |||||||||||| |   ||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  16388650 gattagcgaatataggaaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaag 16388585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 500 - 569
Target Start/End: Complemental strand, 31608597 - 31608529
Alignment:
Q  500 caaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    ||||||||||||||||||  || ||||||||||| || ||||||||||||||||||||||||| ||||||    
T  31608597 caaggattagcgaatacat-gatcaatttttaaacgatccctaattacaaggatgaaatacatgtttaag 31608529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 391 - 447
Target Start/End: Complemental strand, 34665950 - 34665894
Alignment:
Q  391 gggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcatta 447  Q
    ||||||||||||| ||||||||||||||||||||||||||||| || ||||| ||||    
T  34665950 gggtatttttgtcaattcccatgccattttgctaatttgatgacgtggcagtgatta 34665894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 389 - 545
Target Start/End: Complemental strand, 41353756 - 41353600
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    |||||||| ||||||||||| |||| ||||||| ||||||||| |  | | ||| ||||||  | |||||  |||||||||||||| |||||| ||||||    
T  41353756 gagggtatatttgtccattctcatgtcattttgttaatttgataacttggtagtgattaagttgctcaaatgacgaaattttaaatgattaaacaatgca 41353657  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaatt 545  Q
    ||  ||  ||   ||||||||||| |||| | || |||||||||||||| |||||||    
T  41353656 agggtaaattgttaggattagcgattacagaaactaatttttaaatgacgcctaatt 41353600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 461 - 568
Target Start/End: Original strand, 12273171 - 12273278
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| ||||||||  ||  ||    |||||| ||| ||||  |||||||||||||| ||||||||||| ||||||| ||||||    
T  12273171 acgaaattttaaatgattaaacaatgcaagggtaaattgacgggattaacgattacagggaccaatttttaaacgacccctaattgcaaggatcaaatac 12273270  T
Q  561 atatttaa 568  Q
    ||||||||    
T  12273271 atatttaa 12273278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 389 - 480
Target Start/End: Original strand, 27500332 - 27500423
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaa 480  Q
    ||||||||||||| |||||||||||| ||||| |||||||||||| ||  |||| ||||||  |||||||  | |||||||||||| |||||    
T  27500332 gagggtatttttgcccattcccatgcaatttttctaatttgatgacgtgacagtgattaagttggtcaaatgatgaaattttaaatgattaa 27500423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 461 - 569
Target Start/End: Original strand, 1425340 - 1425447
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| |||||| |  ||  || | |||||||| || ||||  |||||||||||||| |||| |||||||||||||| |||||     
T  1425340 acgaaattttaaatgattaaacaatgcaggggtaaattgccaggattagtgattacag-gaccaatttttaaacgacctctaattacaaggatcaaatat 1425438  T
Q  561 atatttaag 569  Q
    |||||||||    
T  1425439 atatttaag 1425447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 465 - 569
Target Start/End: Original strand, 22915680 - 22915784
Alignment:
Q  465 aattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatat 564  Q
    |||||||||| |||||| ||||||||  ||  || | | ||||||||| ||||  |||||||||||||| || ||||| || ||||||| ||||||||||    
T  22915680 aattttaaatgattaaacaatgcaagggtaaattgccaagattagcgattacatggaccaatttttaaacgatccctagttgcaaggatcaaatacatat 22915779  T
Q  565 ttaag 569  Q
    |||||    
T  22915780 ttaag 22915784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 389 - 433
Target Start/End: Complemental strand, 27500270 - 27500226
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatga 433  Q
    |||||||||||||||||||| |||| |||||||||||||||||||    
T  27500270 gagggtatttttgtccattctcatgtcattttgctaatttgatga 27500226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 391 - 447
Target Start/End: Original strand, 34666461 - 34666517
Alignment:
Q  391 gggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcatta 447  Q
    ||||||||||||| |||| |||||||||||||||||||||||| || ||||| ||||    
T  34666461 gggtatttttgtcaattctcatgccattttgctaatttgatgacgtggcagtgatta 34666517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #82
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 514 - 569
Target Start/End: Original strand, 9065741 - 9065796
Alignment:
Q  514 tacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    ||||| || |||||||||||| |||||||||| |||||||| ||||||||||||||    
T  9065741 tacaaggatcaatttttaaataacccctaattgcaaggatggaatacatatttaag 9065796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #83
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 518 - 569
Target Start/End: Complemental strand, 35756636 - 35756586
Alignment:
Q  518 aagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    |||||||||||||||||||||||||||| | | |||||||||||||||||||    
T  35756636 aagaccaatttttaaatgacccctaattgc-atgatgaaatacatatttaag 35756586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #84
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 495 - 569
Target Start/End: Original strand, 7313357 - 7313431
Alignment:
Q  495 gtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    |||| |||||||||| || | ||| |||||||||||||| |||||||| || || |||| |||||||||||||||    
T  7313357 gtttgcaaggattagtgattgcaaggaccaatttttaaacgacccctatttgcagggatcaaatacatatttaag 7313431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #85
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 461 - 569
Target Start/End: Complemental strand, 36928586 - 36928481
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| ||||||||  ||  ||   ||||||||||| |||| ||||||||||||||| ||||| |||||  |||   |||||||    
T  36928586 acgaaattttaaatgattaaacaatgcaagggtaaattgtcaggattagcgattacatagaccaatttttaaacgacccttaattgaaag---gaaatac 36928490  T
Q  561 atatttaag 569  Q
    |||||||||    
T  36928489 atatttaag 36928481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #86
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 687 - 720
Target Start/End: Original strand, 34177514 - 34177547
Alignment:
Q  687 atcaaagttataataatgataataacaagttaac 720  Q
    ||||||||||||||||||||||||||||||||||    
T  34177514 atcaaagttataataatgataataacaagttaac 34177547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #87
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 520 - 569
Target Start/End: Original strand, 42803595 - 42803644
Alignment:
Q  520 gaccaatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    |||||||||||||| |||  |||||| |||||||||||||||||||||||    
T  42803595 gaccaatttttaaacgacttctaattgcaaggatgaaatacatatttaag 42803644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #88
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 501 - 569
Target Start/End: Complemental strand, 5960116 - 5960048
Alignment:
Q  501 aaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    |||||||||||| ||||  || ||||||||||  || |||||||| |||||||||||||||| ||||||    
T  5960116 aaggattagcgattacagggagcaatttttaatcgatccctaattgcaaggatgaaatacatgtttaag 5960048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #89
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 392 - 436
Target Start/End: Original strand, 38003701 - 38003745
Alignment:
Q  392 ggtatttttgtccattcccatgccattttgctaatttgatgatgt 436  Q
    |||||||||||| |||| |||||||||||||||||||||| ||||    
T  38003701 ggtatttttgtctattctcatgccattttgctaatttgataatgt 38003745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #90
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 502 - 565
Target Start/End: Original strand, 10749867 - 10749930
Alignment:
Q  502 aggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatt 565  Q
    ||||||| ||| ||||  ||||||||||||||||| |||||||| |||||| |||| |||||||    
T  10749867 aggattaacgattacatggaccaatttttaaatgatccctaattgcaaggacgaaacacatatt 10749930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #91
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 502 - 565
Target Start/End: Original strand, 11763035 - 11763098
Alignment:
Q  502 aggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatt 565  Q
    ||||||||||| ||||| ||||||||||||||||| || ||||| || ||| |||| |||||||    
T  11763035 aggattagcgattacaaggaccaatttttaaatgatccttaattgcagggacgaaacacatatt 11763098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #92
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 461 - 568
Target Start/End: Complemental strand, 30710965 - 30710859
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| ||||| || ||||||  |||||| |||  |||||||||||||   ||||| |||||||  ||| |||||| ||| ||| ||||||    
T  30710965 acgaaattttaaatgattaatgattgcaaggttagtttgcaaaaattagcgaatacatgaaccaa-ttttaaacaacctctaattgcaaagatcaaatac 30710867  T
Q  561 atatttaa 568  Q
    ||||||||    
T  30710866 atatttaa 30710859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #93
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 495 - 569
Target Start/End: Complemental strand, 7306475 - 7306401
Alignment:
Q  495 gtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    |||| |||| ||||| || | ||| |||||||||||||| |||||||| || || |||| |||||||||||||||    
T  7306475 gtttgcaagaattagtgattgcaaggaccaatttttaaacgacccctatttgcagggatcaaatacatatttaag 7306401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #94
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 527 - 569
Target Start/End: Original strand, 36186448 - 36186490
Alignment:
Q  527 ttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    ||||||| ||||| ||||| |||||||||||||||||||||||    
T  36186448 ttttaaacgacccttaattgcaaggatgaaatacatatttaag 36186490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #95
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 421 - 562
Target Start/End: Original strand, 234016 - 234157
Alignment:
Q  421 gctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaag 520  Q
    ||||||||||| || | | ||| ||||||  | |||||| |||||||||||||| |||||| ||||||||  ||  || | ||||||| | | ||||  |    
T  234016 gctaatttgataatttggtagtgattaagttgatcaaaggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattaacaattacaggg 234115  T
Q  521 accaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    || |||||||||||||  ||||||| |||||| |||| ||||    
T  234116 actaatttttaaatgatgcctaattgcaaggacgaaacacat 234157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #96
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 421 - 562
Target Start/End: Original strand, 710427 - 710568
Alignment:
Q  421 gctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaag 520  Q
    ||||||||||| || | | ||| ||||||  | |||||| |||||||||||||| |||||| ||||||||  ||  || | ||||||| | | ||||  |    
T  710427 gctaatttgataatttggtagtgattaagttgatcaaaggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattaacaattacaggg 710526  T
Q  521 accaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    || |||||||||||||  ||||||| |||||| |||| ||||    
T  710527 actaatttttaaatgatgcctaattgcaaggacgaaacacat 710568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #97
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 421 - 562
Target Start/End: Original strand, 747639 - 747780
Alignment:
Q  421 gctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaag 520  Q
    ||||||||||| || | | ||| ||||||  | |||||| |||||||||||||| |||||| ||||||||  ||  || | ||||||| | | ||||  |    
T  747639 gctaatttgataatttggtagtgattaagttgatcaaaggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattaacaattacaggg 747738  T
Q  521 accaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    || |||||||||||||  ||||||| |||||| |||| ||||    
T  747739 actaatttttaaatgatgcctaattgcaaggacgaaacacat 747780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #98
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 421 - 562
Target Start/End: Original strand, 871534 - 871675
Alignment:
Q  421 gctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaag 520  Q
    ||||||||||| || | | ||| ||||||  | |||||| |||||||||||||| |||||| ||||||||  ||  || | ||||||| | | ||||  |    
T  871534 gctaatttgataatttggtagtgattaagttgatcaaaggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattaacaattacaggg 871633  T
Q  521 accaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    || |||||||||||||  ||||||| |||||| |||| ||||    
T  871634 actaatttttaaatgatgcctaattgcaaggacgaaacacat 871675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 351; Significance: 0; HSPs: 107)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 351; E-Value: 0
Query Start/End: Original strand, 18 - 448
Target Start/End: Complemental strand, 32716801 - 32716372
Alignment:
Q  18 tggtaatatgtgtttggaagagaaaggaaaactatagaaatgagaggaaatagctgcaacatcaatcacattcaacactgccgcaaatcgatctacgtcg 117  Q
    |||||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32716801 tggtaatatgtgtttgaaagagaaaggaaaattatagaaatgagtggaaatagctgcaacatcaatcacattcaacactgccgcaaatcgatctacgtcg 32716702  T
Q  118 tagttaccatcatctttggccagagcaccgccgcgagcagctccttcctccagcgaccaccacgtgcactaccgattccgtctggattgaggtttcatct 217  Q
      |||||| |||| ||||  |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  32716701 ccgttaccgtcatatttgatcagagcaccgccgcgagcagctccttcctccagcaaccaccacgtgcactaccaattccgtctggattgaggtttcatct 32716602  T
Q  218 tccttctcctttattggttcactttcttttttcactatcgctttgctgcatgtgttctgtttggaaacttgaagaaaaagaatgaagcagggagatggat 317  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  32716601 tccttctcctttattggttcactttcttttttcactatcgctttgttgcatgtgttctgtttggaaacttgaagaaaaagaatgaagcagggagattgat 32716502  T
Q  318 gatttctcagagaagaaaataatgaattaggtttctcaagggaagcttgaaggagtgaagaagattaatttgagggtatttttgtccattcccatgccat 417  Q
    |||||||||| |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32716501 gatttctcagggaagaaaa-aatgaatcaggtttctcaagggaagcttgaaggagtgaagaagattaatttgagggtatttttgtccattcccatgccat 32716403  T
Q  418 tttgctaatttgatgatgtagcagtcattaa 448  Q
    |||||||||||||||| || ||||| |||||    
T  32716402 tttgctaatttgatgacgtggcagtgattaa 32716372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 438 - 569
Target Start/End: Original strand, 40758405 - 40758536
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  |||||||| |||||||||||||| ||||| || |||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  40758405 gcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaagactagtttgcaaggattagcgaatacatagaccaatttttaaatgac 40758504  T
Q  538 ccctaattacaaggatgaaatacatatttaag 569  Q
    |||||||| |||||||||||||||||||||||    
T  40758505 ccctaattgcaaggatgaaatacatatttaag 40758536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 388 - 565
Target Start/End: Original strand, 9368546 - 9368723
Alignment:
Q  388 tgagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgc 487  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||| || ||| |||||||| |||| || |||||||||||||||| |||||| ||||     
T  9368546 tgagggtatttttgtccattctcatgccattttgttaatttgatgacgtggcaatcattaagtgggttaaggaacgaaattttaaatgattaaacaatgt 9368645  T
Q  488 aagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatt 565  Q
    |||| || ||| |||||||||  || ||||  |||||||||||||| ||||||||||| |||||| ||||||||||||    
T  9368646 aagagtaatttgcaaggattaatgattacagggaccaatttttaaacgacccctaattgcaaggacgaaatacatatt 9368723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 389 - 562
Target Start/End: Original strand, 40788664 - 40788837
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||  |||||||| |||||||||||||  |||||| ||||||    
T  40788664 gagggtatttttgtccattcccatgccattttgctaatttgatgacgtggcagtgattaagttggtcaaaggacgaaattttaaaagattaaacaatgca 40788763  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    ||| ||  || | ||||||||||| ||||  ||| |||||||||||||| ||||||| |||||| |||| ||||    
T  40788764 agagtaaattgccaggattagcgattacagggactaatttttaaatgacgcctaattgcaaggacgaaacacat 40788837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 391 - 551
Target Start/End: Original strand, 42855553 - 42855713
Alignment:
Q  391 gggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaag 490  Q
    |||||||||| ||| |||||| |||||||||||||||||||||| |  |||| ||||| || ||||||| | |||||||||||| |||||||||||||||    
T  42855553 gggtatttttatcctttcccaagccattttgctaatttgatgatctgacagtgattaaccgagtcaaaggatgaaattttaaatgattaaagaatgcaag 42855652  T
Q  491 actagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaagg 551  Q
     ||||||| ||||||||||||||||||  ||| |||||||||||||| ||||||| |||||    
T  42855653 gctagtttgcaaggattagcgaatacatggactaatttttaaatgacgcctaattgcaagg 42855713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 389 - 562
Target Start/End: Complemental strand, 29686123 - 29685950
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    |||||||||||| |||||||||||||||||||||||||||||||| || ||||| || |||  ||||||||||||||||||||||| |||||| ||||||    
T  29686123 gagggtatttttctccattcccatgccattttgctaatttgatgacgtggcagtgatcaagttggtcaaagaacgaaattttaaatgattaaacaatgca 29686024  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    ||  ||  ||   ||||||||||| ||||  ||| |||||||||||||| ||||||| |||||| |||||||||    
T  29686023 aggataaattgtcaggattagcgattacagggactaatttttaaatgacgcctaattgcaaggacgaaatacat 29685950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 399 - 567
Target Start/End: Original strand, 41558138 - 41558306
Alignment:
Q  399 ttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagttt 498  Q
    |||||||||||||| |||||||| |||||||||||||| ||||| |||||  |||   ||| |||||||||||||| ||||| || |||||||||| |||    
T  41558138 ttgtccattcccataccattttgataatttgatgatgtggcagtaattaactgggctcaaggacgaaattttaaatgattaatgattgcaagactaattt 41558237  T
Q  499 acaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatattta 567  Q
     ||||||||||||||||||  ||  |||||||||| ||||||||||| || ||||||||||||||||||    
T  41558238 gcaaggattagcgaatacatggattaatttttaaacgacccctaattgcagggatgaaatacatattta 41558306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 389 - 557
Target Start/End: Complemental strand, 35644033 - 35643865
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||   ||||||| |||||||||||||| |||||| ||||||    
T  35644033 gagggtatttttgtccattcccatgccattttgctaatttgatgacgtggcagtgattaagtttgtcaaaggacgaaattttaaatgattaaacaatgca 35643934  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaa 557  Q
     |  ||  || | ||||||||||| ||||  ||| |||||||||||||| ||||||| |||||| ||||    
T  35643933 cgggtaaattgccaggattagcgattacagggactaatttttaaatgacgcctaattgcaaggacgaaa 35643865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 453 - 569
Target Start/End: Original strand, 36417998 - 36418114
Alignment:
Q  453 gtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaagga 552  Q
    ||||||| |||||||||||||| ||||| || |||||| ||||||| ||||||||||||||||||   ||||||||||||| ||||||||||||||||||    
T  36417998 gtcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacaggaaccaatttttaaacgacccctaattacaagga 36418097  T
Q  553 tgaaatacatatttaag 569  Q
    |||||||||||||||||    
T  36418098 tgaaatacatatttaag 36418114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 389 - 552
Target Start/End: Complemental strand, 52032320 - 52032157
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| || | ||| ||||||  |||||||| |||||||||||||| |||||| ||||||    
T  52032320 gagggtatttttgtccattcccatgccattttgttaatttgatgacgtggtagtgattaagttggtcaaaggacgaaattttaaatgattaaacaatgca 52032221  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaagga 552  Q
    ||  ||  || | ||||||||||| ||||| ||  |||||||||||||| ||||||| ||||||    
T  52032220 agggtaaattgctaggattagcgattacaaggattaatttttaaatgacgcctaattgcaagga 52032157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 389 - 562
Target Start/End: Complemental strand, 3469382 - 3469209
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || || || ||||||  |||||||| |||||||||||||| |||||| ||||||    
T  3469382 gagggtatttttgtccattcccatgccattttgctaatttgatgacgtggccgtgattaagttggtcaaaggacgaaattttaaatgattaaacaatgca 3469283  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    ||  ||  || | |||||||| || ||||  ||| |||||||||||||| ||||||| ||| || |||| ||||    
T  3469282 agggtaaattgccaggattagtgattacatggactaatttttaaatgacgcctaattgcaaagacgaaacacat 3469209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 389 - 562
Target Start/End: Original strand, 29118782 - 29118955
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    ||||||||||||||| |||||||||||||||||||||| |||||| || ||||| ||||||  |||||||| |||||||||||||| |||||| ||||||    
T  29118782 gagggtatttttgtctattcccatgccattttgctaatgtgatgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaatgca 29118881  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    |   ||  || | ||||||||||| ||||  ||| |||||||||||||| ||||||| |||||| |||| ||||    
T  29118882 atggtaaattgccaggattagcgattacagtgactaatttttaaatgacgcctaattgcaaggacgaaacacat 29118955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 453 - 568
Target Start/End: Complemental strand, 36417806 - 36417691
Alignment:
Q  453 gtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaagga 552  Q
    ||||||| |||||||||||||| ||||| || |||||| ||||||| ||||||||||||||||||  |||||||||||||| ||||||||||||||||||    
T  36417806 gtcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacagggaccaatttttaaacgacccctaattacaagga 36417707  T
Q  553 tgaaatacatatttaa 568  Q
    ||||| |||| |||||    
T  36417706 tgaaagacatgtttaa 36417691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 388 - 562
Target Start/End: Complemental strand, 13948963 - 13948789
Alignment:
Q  388 tgagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgc 487  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |  |||| ||||||  |||||||| |||||||||||||| |||||| |||||    
T  13948963 tgagggtatttttgtccattcccatgccattttgctaatttgatgacttgacagtgattaagttggtcaaaggacgaaattttaaatgattaaacaatgc 13948864  T
Q  488 aagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    |||  ||  || | | ||||||||| ||||  ||| |||||||||||||  ||||||| |||||| |||| ||||    
T  13948863 aagggtaaattgccaagattagcgattacatggactaatttttaaatgatgcctaattgcaaggacgaaacacat 13948789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 438 - 568
Target Start/End: Complemental strand, 26463765 - 26463635
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  |||||||| |||||||||||||| ||||| || |||||||||| ||| ||||||||| ||||||||| || ||||||||||| |||    
T  26463765 gcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaagactaatttgcaaggattaccgaatacaaggatcaatttttaaacgac 26463666  T
Q  538 ccctaattacaaggatgaaatacatatttaa 568  Q
    || ||||| ||||||||||||||||||||||    
T  26463665 ccttaattgcaaggatgaaatacatatttaa 26463635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 389 - 562
Target Start/End: Complemental strand, 47551675 - 47551502
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||| ||||| ||||||  |||||||| | |||||||||||| |||||| ||||||    
T  47551675 gagggtaattttgtccatttccatgccattttgctaatttgatgatgtggcagtgattaagttggtcaaaggatgaaattttaaatgattaaacaatgca 47551576  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    ||  ||  || | || |||||||| ||||  ||| ||||||||||||||  |||||| |||||| |||| ||||    
T  47551575 agggtaaattgccagtattagcgattacagggactaatttttaaatgacatctaattgcaaggacgaaacacat 47551502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 389 - 557
Target Start/End: Original strand, 3469444 - 3469612
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    |||||||||||||||||||||||||||||||||||||||||||||  | | ||| ||||||  |||||||| ||| |||||||||| |||||| ||||||    
T  3469444 gagggtatttttgtccattcccatgccattttgctaatttgatgacttggtagtgattaagttggtcaaaggacggaattttaaatgattaaacaatgca 3469543  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaa 557  Q
    ||  ||  || | ||||||||||| ||||   || |||||||||||||| ||||||| |||||| ||||    
T  3469544 agggtaaattgccaggattagcgattacaggaactaatttttaaatgacgcctaattgcaaggacgaaa 3469612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 390 - 562
Target Start/End: Original strand, 32306669 - 32306841
Alignment:
Q  390 agggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaa 489  Q
    |||||||||||||||||||| |||||||||||||||||||||||  | | ||| ||||||  |||||||  |||||||||||||| |||||| |||||||    
T  32306669 agggtatttttgtccattcctatgccattttgctaatttgatgacttggtagtgattaagttggtcaaatgacgaaattttaaatgattaaacaatgcaa 32306768  T
Q  490 gactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    |  ||  || | ||||||||||| ||||  ||| |||||||||||||| ||||||| |||||| |||| ||||    
T  32306769 gggtaaattgccaggattagcgattacattgactaatttttaaatgacgcctaattgcaaggacgaaacacat 32306841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 390 - 562
Target Start/End: Original strand, 37778518 - 37778690
Alignment:
Q  390 agggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaa 489  Q
    |||||||||||||| |||| |||||||||||||||||||||||| || ||||| ||||||  |||||||| | |||||||||||| |||||| |||||||    
T  37778518 agggtatttttgtctattctcatgccattttgctaatttgatgacgtggcagtgattaagttggtcaaaggatgaaattttaaatgattaaacaatgcaa 37778617  T
Q  490 gactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    |  ||  || | ||||||||| | ||||  ||| |||||||||||||| ||||||| |||||| |||| ||||    
T  37778618 gggtaaattgccaggattagcaattacagggactaatttttaaatgacgcctaattgcaaggacgaaacacat 37778690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 438 - 569
Target Start/End: Complemental strand, 33689514 - 33689384
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  |||||||| || ||||||||||| ||||| || |||||| ||||||| |||| |||||||||||||  |||||||||||||| |||    
T  33689514 gcagtgattaagttggtcaaaggacaaaattttaaatgattaatgattgcaaggctagtttgcaagaattagcgaatacat-gaccaatttttaaacgac 33689416  T
Q  538 ccctaattacaaggatgaaatacatatttaag 569  Q
    |||||||| |||||||||||||||||||||||    
T  33689415 ccctaattgcaaggatgaaatacatatttaag 33689384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 388 - 545
Target Start/End: Original strand, 43608727 - 43608884
Alignment:
Q  388 tgagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgc 487  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||| ||||||| |||||   |||  | | |||||||||||||| ||||||   |||    
T  43608727 tgagggtatttttgtccatttccatgccatcttgctaatttgatgatatagcagtaattaaataggtgtagggacgaaattttaaatgattaaactttgc 43608826  T
Q  488 aagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaatt 545  Q
    |||  || ||||| ||||||| ||| |||| |||||||||||||||||| ||||||||    
T  43608827 aaggttaatttacgaggattaacgattacagagaccaatttttaaatgatccctaatt 43608884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 394 - 562
Target Start/End: Complemental strand, 11910876 - 11910708
Alignment:
Q  394 tatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagact 493  Q
    |||||||||||||||||||||||||||||||||||||| | || | ||| ||||||  |||||||| |||||||||||||| |||||| ||||||||  |    
T  11910876 tatttttgtccattcccatgccattttgctaatttgataacgtggtagtgattaagttggtcaaaggacgaaattttaaatgattaaacaatgcaagggt 11910777  T
Q  494 agtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    |  || | ||||||||||| ||||  ||  ||||||||||||||  |||||| |||||| |||| ||||    
T  11910776 aaattgctaggattagcgattacagggattaatttttaaatgacgtctaattgcaaggacgaaacacat 11910708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 438 - 562
Target Start/End: Complemental strand, 23458112 - 23457988
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  |||||||| |||||||||||||| |||||  | |||||| ||||||| ||||||||||||||||||  |||||||||||||| |||    
T  23458112 gcagtgattaagttggtcaaaggacgaaattttaaatgattaattattgcaaggctagtttgcaaggattagcgaatacagggaccaatttttaaacgac 23458013  T
Q  538 ccctaattacaaggatgaaatacat 562  Q
    || ||||| ||||||||||||||||    
T  23458012 ccttaattgcaaggatgaaatacat 23457988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 452 - 568
Target Start/End: Original strand, 42343040 - 42343156
Alignment:
Q  452 ggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaagg 551  Q
    |||||||| |||||||||||||| |||||  | |||||||||| ||| ||| ||||||||||||||  || ||||||||||| ||||| |||||||||||    
T  42343040 ggtcaaaggacgaaattttaaatgattaatcattgcaagactaatttgcaaagattagcgaatacatggatcaatttttaaacgacccttaattacaagg 42343139  T
Q  552 atgaaatacatatttaa 568  Q
    |||||||||||||||||    
T  42343140 atgaaatacatatttaa 42343156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 392 - 562
Target Start/End: Complemental strand, 3596288 - 3596118
Alignment:
Q  392 ggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaaga 491  Q
    ||||||||||||||||| ||||||||||||||||||||||||  | | ||| ||||||  ||||||||||||||||||||||| |||||| |||||||      
T  3596288 ggtatttttgtccattctcatgccattttgctaatttgatgacatggtagtgattaagttggtcaaagaacgaaattttaaatgattaaataatgcaaag 3596189  T
Q  492 ctagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
     ||  ||   ||||||||||| ||||  ||| ||||||||||| || ||||||| |||||| |||| ||||    
T  3596188 gtaaattgtcaggattagcgattacattgactaatttttaaatcacgcctaattgcaaggacgaaacacat 3596118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 389 - 535
Target Start/End: Original strand, 10307619 - 10307765
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    |||||||||||||||||||||||||| ||||||||||||| |||| ||   ||| ||||||  |||||||| |||||||||||||| |||||| ||||||    
T  10307619 gagggtatttttgtccattcccatgcaattttgctaattttatgacgtgcgagtgattaagttggtcaaaggacgaaattttaaatgattaaacaatgca 10307718  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatg 535  Q
    ||  ||  || | ||||||||||| |||| |||| ||||||||||||    
T  10307719 agggtaaattgccaggattagcgattacagagactaatttttaaatg 10307765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 438 - 568
Target Start/End: Original strand, 46475076 - 46475205
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  |||||||| |||||||||||||| ||||| || |||||| ||||||| ||||||||||||||||| |  | ||||||||||| |||    
T  46475076 gcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatac-agtatcaatttttaaacgac 46475174  T
Q  538 ccctaattacaaggatgaaatacatatttaa 568  Q
    ||||||||  |||||||||||||||||||||    
T  46475175 ccctaattgtaaggatgaaatacatatttaa 46475205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 389 - 490
Target Start/End: Complemental strand, 29118720 - 29118619
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |  |||| ||||||  |||||||| |||||||||||||| |||||| ||||||    
T  29118720 gagggtatttttgtccattcccatgccattttgctaatttgatgacttgacagtgattaagttggtcaaaggacgaaattttaaatgattaaacaatgca 29118621  T
Q  489 ag 490  Q
    ||    
T  29118620 ag 29118619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 389 - 562
Target Start/End: Original strand, 52032383 - 52032556
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    ||||||||||||||||||||||||| |||||||||||||||||||  | |  || ||||||  |||||||| | |||||||||||| |||||| ||||||    
T  52032383 gagggtatttttgtccattcccatgtcattttgctaatttgatgacttggtggtgattaagttggtcaaaggaagaaattttaaatgattaaacaatgca 52032482  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    ||  ||  || | ||||||||||| ||||  ||| ||||||||||||||  |||||| |||||| |||| ||||    
T  52032483 agggtatattgccaggattagcgattacagggactaatttttaaatgacgtctaattgcaaggacgaaacacat 52032556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 461 - 569
Target Start/End: Original strand, 23458297 - 23458405
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| ||||||||  ||  || ||||||||||||| |||| ||||||||||||||| ||||| ||||| ||||||||||||||    
T  23458297 acgaaattttaaatgattaaacaatgcaagggtaaattgcaaggattagcgattacagagaccaatttttaaacgacccataattgcaaggatgaaatac 23458396  T
Q  561 atatttaag 569  Q
    |||||||||    
T  23458397 atatttaag 23458405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 438 - 569
Target Start/End: Original strand, 43384578 - 43384709
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  |||||||| |||||||||||||| | ||| || |||||| ||||||| ||||||||| |||||| | |||| |||||||||| ||     
T  43384578 gcagtgattaagttggtcaaaggacgaaattttaaatgactaatgattgcaaggctagtttgcaaggattaacgaatatagagacaaatttttaaacgat 43384677  T
Q  538 ccctaattacaaggatgaaatacatatttaag 569  Q
     ||||||| |||||||||||||||||||||||    
T  43384678 tcctaattgcaaggatgaaatacatatttaag 43384709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 452 - 569
Target Start/End: Complemental strand, 19741042 - 19740925
Alignment:
Q  452 ggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaagg 551  Q
    |||||||| |||||||||||||| ||||| || |||||| ||||||| ||||||||||||| ||||  |||||||||||||| || |||||||| || |     
T  19741042 ggtcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgattacagggaccaatttttaaacgatccctaattgcatga 19740943  T
Q  552 atgaaatacatatttaag 569  Q
    || |||||||||||||||    
T  19740942 atcaaatacatatttaag 19740925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 389 - 562
Target Start/End: Complemental strand, 32306606 - 32306433
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    |||| |||||||||||||||||| | ||||||||||||||||||| || | ||| ||||||  |||||||| |||||||||||||| |||||| ||||||    
T  32306606 gaggatatttttgtccattcccaagtcattttgctaatttgatgacgtggtagtgattaagttggtcaaaggacgaaattttaaatgattaaacaatgca 32306507  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    ||  ||  ||   | ||||||||| ||||   || |||||||||||||| ||||||| |||||| |||| ||||    
T  32306506 agggtaaattgtcaagattagcgattacatgaactaatttttaaatgacgcctaattgcaaggacgaaacacat 32306433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 388 - 489
Target Start/End: Complemental strand, 40788603 - 40788502
Alignment:
Q  388 tgagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgc 487  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | | ||| ||||||  | |||||  |||||||||||||| |||||| |||||    
T  40788603 tgagggtatttttgtccattcccatgccattttgctaatttgatgatttggtagtgattaagttgatcaaatgacgaaattttaaatgattaaataatgc 40788504  T
Q  488 aa 489  Q
    ||    
T  40788503 aa 40788502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 456 - 569
Target Start/End: Original strand, 53757036 - 53757149
Alignment:
Q  456 aaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatga 555  Q
    |||| |||||||||||||| ||||| || ||||||  |||||| ||||||||||||||||||  |||||||||||||| |||  |||||| |||| ||||    
T  53757036 aaaggacgaaattttaaatgattaatgattgcaaggttagtttgcaaggattagcgaatacatggaccaatttttaaacgacttctaattgcaagaatga 53757135  T
Q  556 aatacatatttaag 569  Q
    ||||||||||||||    
T  53757136 aatacatatttaag 53757149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 461 - 569
Target Start/End: Complemental strand, 2796289 - 2796181
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| ||||||||  ||  || | ||||||||||| ||||  |||||||||||||||||||||||||| ||||||| ||||||    
T  2796289 acgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcgattacagggaccaatttttaaatgacccctaattgcaaggatcaaatac 2796190  T
Q  561 atatttaag 569  Q
    |||||||||    
T  2796189 atatttaag 2796181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 461 - 569
Target Start/End: Complemental strand, 9367851 - 9367743
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||  | |||||| ||||||| |||||||||||||||||| |||||| |||||||| |||||||||||  | |||| ||||||    
T  9367851 acgaaattttaaatgattaataattgcaaggctagtttgcaaggattagcgaatacagagaccattttttaaacgacccctaattgtagggattaaatac 9367752  T
Q  561 atatttaag 569  Q
    |||||||||    
T  9367751 atatttaag 9367743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 389 - 557
Target Start/End: Complemental strand, 43998327 - 43998159
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    |||| |||||||| |||||||||||||||||||| ||||||||||  | | ||| ||||||  |||||||  |||||||||||||| |||||| ||||||    
T  43998327 gaggatatttttgaccattcccatgccattttgcgaatttgatgacttggtagtgattaagttggtcaaatgacgaaattttaaatgattaaacaatgca 43998228  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaa 557  Q
    ||  ||  || | || |||| ||| ||||| ||| |||||||||||||| | ||||||||| |||||||    
T  43998227 agggtaaattgccagaattaacgattacaaggactaatttttaaatgacacataattacaatgatgaaa 43998159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 461 - 568
Target Start/End: Complemental strand, 41988694 - 41988587
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||| ||||||| |||||||||||||||| || ||| |||| ||||| |||||||  |||||||||||||||||||| || ||| ||||| |||||||    
T  41988694 acgaaaatttaaatgattaaagaatgcaagagtaatttgcaagaattagtgaatacagggaccaatttttaaatgacccttatttataaggaggaaatac 41988595  T
Q  561 atatttaa 568  Q
    ||||||||    
T  41988594 atatttaa 41988587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 391 - 565
Target Start/End: Original strand, 47857493 - 47857667
Alignment:
Q  391 gggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaag 490  Q
    |||||| ||||||| |||| |||| ||||||||||||| |||| || ||| | ||||||  |||||||  |||||||||||||| ||||||   ||||||    
T  47857493 gggtatatttgtcctttcctatgctattttgctaattttatgacgtggcattgattaagttggtcaaatgacgaaattttaaatgattaaactttgcaag 47857592  T
Q  491 actagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatt 565  Q
      || ||||| || |||| ||| |||||||| ||||||||||| ||| |||||||||| ||| |||| |||||||    
T  47857593 gataatttaccagaattaacgattacaaagatcaatttttaaacgacacctaattacagggacgaaacacatatt 47857667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 389 - 490
Target Start/End: Original strand, 10294804 - 10294904
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    ||||||||||||||||||||||||||||||| | |||||||||||  | ||||| ||||||  ||||||| ||||||||||||||| |||||| ||||||    
T  10294804 gagggtatttttgtccattcccatgccatttgg-taatttgatgacttggcagtgattaagttggtcaaaaaacgaaattttaaatgattaaacaatgca 10294902  T
Q  489 ag 490  Q
    ||    
T  10294903 ag 10294904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 389 - 562
Target Start/End: Original strand, 29686185 - 29686357
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||  | | ||| ||||||  |||||||  || ||||||||||| |||||| ||||||    
T  29686185 gagggtatttttgtccatttccatgccattttgctaattt-atgacttggtagtgattaagttggtcaaatgacaaaattttaaatgattaaacaatgca 29686283  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    ||  ||  || | |||||||| || ||||| ||| |||||| ||||||| ||||||| |||||| |||| ||||    
T  29686284 agggtaaattgccaggattagtgattacaatgactaattttaaaatgacgcctaattgcaaggacgaaacacat 29686357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 500 - 569
Target Start/End: Complemental strand, 35712115 - 35712046
Alignment:
Q  500 caaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    ||||||||||||||||||  ||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  35712115 caaggattagcgaatacatggaccaatttttaaatgatccctaattgcaaggatgaaatacatatttaag 35712046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 389 - 486
Target Start/End: Complemental strand, 41422154 - 41422057
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatg 486  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||  |||| ||||||  |||||||  |||||||||||||| |||||| ||||    
T  41422154 gagggtatttttgtccattcccatgtcattttgctaatttgatgacgtgacagtgattaagttggtcaaatgacgaaattttaaatgattaaacaatg 41422057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 461 - 569
Target Start/End: Original strand, 3850445 - 3850553
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||  ||||| || ||||   ||||||| ||||||||| ||||||||  |||||||||||||| ||||||||||| || |||||||||||    
T  3850445 acgaaattttaaacgattaatgattgcagagctagtttccaaggattatcgaatacagggaccaatttttaaacgacccctaattgcagggatgaaatac 3850544  T
Q  561 atatttaag 569  Q
    |||||||||    
T  3850545 atatttaag 3850553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 390 - 562
Target Start/End: Complemental strand, 4322772 - 4322601
Alignment:
Q  390 agggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaa 489  Q
    |||| |||||||||||||||||||| |||||| |||||||||||||| |||||| ||||| ||||  | | ||||| |||||||| |||||| |||||||    
T  4322772 agggcatttttgtccattcccatgctattttgttaatttgatgatgtggcagtctttaagtgggttcagggacgaatttttaaatgattaaacaatgcaa 4322673  T
Q  490 gactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    |  || |||   ||||||||||| ||| | ||| |||||||||| ||| ||||||| || || ||||| ||||    
T  4322672 ggttaatttgtcaggattagcgattac-aggacgaatttttaaacgacgcctaattgcaggggtgaaacacat 4322601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 461 - 569
Target Start/End: Original strand, 9294276 - 9294384
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| ||||||||  ||  || | ||||||||||| || |  |||||||||||||| ||||||||||| ||||||||||||||    
T  9294276 acgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcgattatagggaccaatttttaaacgacccctaattgcaaggatgaaatac 9294375  T
Q  561 atatttaag 569  Q
    |||||||||    
T  9294376 atatttaag 9294384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 461 - 569
Target Start/End: Complemental strand, 3849141 - 3849033
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| ||||| || |||| | ||||||| ||||||||| ||||||||  |||||||||||||| ||| ||||||| || ||||||| | |    
T  3849141 acgaaattttaaatgattaatgattgcagggctagtttgcaaggattaacgaatacagggaccaatttttaaacgactcctaattgcagggatgaatttc 3849042  T
Q  561 atatttaag 569  Q
    |||||||||    
T  3849041 atatttaag 3849033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 461 - 569
Target Start/End: Original strand, 33689697 - 33689805
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| ||||||||  ||  || | ||||||||||| ||||   ||||||||||||| ||||||||||| ||| ||||||||||    
T  33689697 acgaaattttaaatgattaaataatgcaagggtaaattgccaggattagcgattacatgaaccaatttttaaacgacccctaattgcaaagatgaaatac 33689796  T
Q  561 atatttaag 569  Q
    |||||||||    
T  33689797 atatttaag 33689805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 461 - 569
Target Start/End: Complemental strand, 41558118 - 41558010
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||  | ||||||  || | | |||||||||||||||||||  ||||||||||||| ||||| ||||| |||| |||||||||    
T  41558118 acgaaattttaaatgattaataattgcaaggttaatgtgcaaggattagcgaatacaagtaccaatttttaaacgacccataattgcaagaatgaaatac 41558019  T
Q  561 atatttaag 569  Q
    |||||||||    
T  41558018 atatttaag 41558010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 500 - 568
Target Start/End: Complemental strand, 55052363 - 55052295
Alignment:
Q  500 caaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaa 568  Q
    |||||||||||||||||| ||||||||||||| | |||||||||||| |||||| ||||||||||||||    
T  55052363 caaggattagcgaatacagagaccaatttttagacgacccctaattataaggatcaaatacatatttaa 55052295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 442 - 565
Target Start/End: Original strand, 32431491 - 32431614
Alignment:
Q  442 tcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccct 541  Q
    |||||||||||||||| | ||||||||||||||  |||||   |||||| ||| |||   ||||||| ||| | ||  ||||||||||||||||||||||    
T  32431491 tcattaagcgggtcaagggacgaaattttaaatggttaaactttgcaaggctaatttgtcaggattaacgattgcagggaccaatttttaaatgacccct 32431590  T
Q  542 aattacaaggatgaaatacatatt 565  Q
    ||||||| ||| ||||||||||||    
T  32431591 aattacagggacgaaatacatatt 32431614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 502 - 569
Target Start/End: Complemental strand, 40758216 - 40758149
Alignment:
Q  502 aggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    ||||||||||| ||||  |||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  40758216 aggattagcgattacatggaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaag 40758149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 388 - 565
Target Start/End: Complemental strand, 6956432 - 6956254
Alignment:
Q  388 tgagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcatt-aagcgggtcaaagaacgaaattttaaataattaaagaatg 486  Q
    |||||||||||||||||||||||||| ||||||| |||||| |||| || ||||| ||| ||| ||||  | | |||||||||||||| ||| |||  ||    
T  6956432 tgagggtatttttgtccattcccatgtcattttgttaattttatgacgtggcagtaattaaagtgggtgtagggacgaaattttaaatgatttaagtttg 6956333  T
Q  487 caagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatt 565  Q
    ||||  || ||| | ||||||| ||| || |  ||| ||||||||||||| |||||||| || ||| |||| |||||||    
T  6956332 caagggtaatttgccaggattaacgattatagggactaatttttaaatgatccctaattgcagggacgaaacacatatt 6956254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 440 - 565
Target Start/End: Original strand, 1079518 - 1079643
Alignment:
Q  440 agtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgaccc 539  Q
    ||||||||| |||||||  | |||||||||||||  ||||||   |||||| ||| ||| | ||||||| ||| ||||  ||||||||||||||||||||    
T  1079518 agtcattaaacgggtcatgggacgaaattttaaaagattaaactttgcaaggctaatttgccaggattaacgattacagggaccaatttttaaatgaccc 1079617  T
Q  540 ctaattacaaggatgaaatacatatt 565  Q
    |||||| || |||||||| |||||||    
T  1079618 ctaattgcagggatgaaacacatatt 1079643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 464 - 569
Target Start/End: Original strand, 40033777 - 40033882
Alignment:
Q  464 aaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacata 563  Q
    ||||||||||| |||||| ||||||||  ||  || | ||||||||| | || | | ||||||||||||| ||||||||||| |||||||||||||||||    
T  40033777 aaattttaaatgattaaacaatgcaagggtaaattgccaggattagcaattatagaaaccaatttttaaacgacccctaattgcaaggatgaaatacata 40033876  T
Q  564 tttaag 569  Q
    ||||||    
T  40033877 tttaag 40033882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 461 - 569
Target Start/End: Original strand, 19741210 - 19741318
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| ||| ||||  ||  || | | ||||||||| ||||  |||||||||||||| ||||||||||| ||||||| ||||||    
T  19741210 acgaaattttaaatgattaaacaatacaagggtaaattgccaagattagcgattacagggaccaatttttaaacgacccctaattgcaaggatcaaatac 19741309  T
Q  561 atatttaag 569  Q
    |||||||||    
T  19741310 atatttaag 19741318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 461 - 569
Target Start/End: Complemental strand, 42342901 - 42342793
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| ||||||||  ||  || | |||| |||| | ||||  |||||||||||||| |||||||||||  |||||||||||||    
T  42342901 acgaaattttaaatgattaaacaatgcaagggtaaattgccaggactagcaattacatggaccaatttttaaacgacccctaattgtaaggatgaaatac 42342802  T
Q  561 atatttaag 569  Q
    |||||||||    
T  42342801 atatttaag 42342793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 504 - 568
Target Start/End: Complemental strand, 46474882 - 46474818
Alignment:
Q  504 gattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaa 568  Q
    ||||||||| |||| ||||||||||||||| ||||||||||| ||| ||||||||||||||||||    
T  46474882 gattagcgattacagagaccaatttttaaacgacccctaattgcaaagatgaaatacatatttaa 46474818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 461 - 569
Target Start/End: Original strand, 51994204 - 51994312
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| |||||| |  ||  || | || |||||||| ||||| |||||||||||||| || |||||||| ||||||| ||||||    
T  51994204 acgaaattttaaatgattaaacaatgcaggggtaaattgccagaattagcgattacaaggaccaatttttaaacgatccctaattgcaaggatcaaatac 51994303  T
Q  561 atatttaag 569  Q
    |||||||||    
T  51994304 atatttaag 51994312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 391 - 453
Target Start/End: Complemental strand, 2944093 - 2944031
Alignment:
Q  391 gggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcggg 453  Q
    ||||||||||||| ||||||||||||||||||||||||||||| || ||||| ||||| ||||    
T  2944093 gggtatttttgtcaattcccatgccattttgctaatttgatgacgtggcagtgattaaccggg 2944031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 502 - 568
Target Start/End: Complemental strand, 36150596 - 36150530
Alignment:
Q  502 aggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaa 568  Q
    ||||||| | |||| || |||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  36150596 aggattaacaaatataaggaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaa 36150530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 388 - 565
Target Start/End: Complemental strand, 1078719 - 1078543
Alignment:
Q  388 tgagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgc 487  Q
    |||| |||||||||||||||||| |||||| |||||||||||||||  |  || | |||||  ||||  | | |||||||||||||| ||||||   | |    
T  1078719 tgagagtatttttgtccattcccgtgccatcttgctaatttgatgacatgacaataattaaatgggtgtagggacgaaattttaaatgattaaactttac 1078620  T
Q  488 aagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatt 565  Q
    |||  || ||||| | ||||| ||| ||||  |||||||||||||||||||||||||| || ||| |||| |||||||    
T  1078619 aaggttaatttacca-gattaacgattacagggaccaatttttaaatgacccctaattgcatggacgaaaaacatatt 1078543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 389 - 458
Target Start/End: Original strand, 3596353 - 3596422
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaa 458  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||  |||| ||||||  |||||||    
T  3596353 gagggtatttttgtccattcccatgtcattttgctaatttgatgacgtgacagtgattaagttggtcaaa 3596422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 388 - 433
Target Start/End: Original strand, 35759046 - 35759091
Alignment:
Q  388 tgagggtatttttgtccattcccatgccattttgctaatttgatga 433  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||    
T  35759046 tgagggtatttttgtccattctcatgccattttgctaatttgatga 35759091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 391 - 447
Target Start/End: Complemental strand, 1756730 - 1756674
Alignment:
Q  391 gggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcatta 447  Q
    ||||||||||||| ||||||||||||||||||||||||||||| || ||||| ||||    
T  1756730 gggtatttttgtcaattcccatgccattttgctaatttgatgacgtggcagtgatta 1756674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 391 - 447
Target Start/End: Original strand, 2944586 - 2944642
Alignment:
Q  391 gggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcatta 447  Q
    ||||||||||||| ||||||||||||||||||||||||||||| || ||||| ||||    
T  2944586 gggtatttttgtcaattcccatgccattttgctaatttgatgacgtggcagtgatta 2944642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 493 - 568
Target Start/End: Complemental strand, 21783476 - 21783403
Alignment:
Q  493 tagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaa 568  Q
    |||||| ||||||||||||||||||   ||||||||  ||| ||||| ||||||||||||||||||||||||||||    
T  21783476 tagtttgcaaggattagcgaatacaggaaccaattt--aaacgacccttaattacaaggatgaaatacatatttaa 21783403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 388 - 480
Target Start/End: Original strand, 29192910 - 29193002
Alignment:
Q  388 tgagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaa 480  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||| ||  |||| ||||| ||||   | | || |||||||||||||||||    
T  29192910 tgagggtatttttgtcaattcccatgtcattttgctaatttgatgacgtgacagtgattaatcgggaagagggacaaaattttaaataattaa 29193002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 391 - 447
Target Start/End: Original strand, 37249718 - 37249774
Alignment:
Q  391 gggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcatta 447  Q
    ||||||||||||| ||||||||||||||||||||||||||||| || ||||| ||||    
T  37249718 gggtatttttgtcaattcccatgccattttgctaatttgatgacgtggcagtgatta 37249774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 391 - 447
Target Start/End: Complemental strand, 45278724 - 45278668
Alignment:
Q  391 gggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcatta 447  Q
    ||||||||||||| ||||||||||||||||||||||||||||| || ||||| ||||    
T  45278724 gggtatttttgtcaattcccatgccattttgctaatttgatgacgtggcagtgatta 45278668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 391 - 447
Target Start/End: Original strand, 45279204 - 45279260
Alignment:
Q  391 gggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcatta 447  Q
    ||||||||||||||||||||||| ||||||||||||||||||| || ||||| ||||    
T  45279204 gggtatttttgtccattcccatgtcattttgctaatttgatgacgtggcagtgatta 45279260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 391 - 447
Target Start/End: Original strand, 48189019 - 48189075
Alignment:
Q  391 gggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcatta 447  Q
    ||||||||||||| ||||||||||||||||||||||||||||| || ||||| ||||    
T  48189019 gggtatttttgtcaattcccatgccattttgctaatttgatgacgtggcagtgatta 48189075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 501 - 569
Target Start/End: Complemental strand, 51994034 - 51993966
Alignment:
Q  501 aaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    |||||||||||||||||  |||||||||||||| |||| |||||| ||| ||| |||||||||||||||    
T  51994034 aaggattagcgaatacagggaccaatttttaaacgacctctaattgcaaagatcaaatacatatttaag 51993966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 391 - 442
Target Start/End: Original strand, 11026552 - 11026603
Alignment:
Q  391 gggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagt 442  Q
    ||||||||||||| ||||||||||||||||||||||||||||| || |||||    
T  11026552 gggtatttttgtcaattcccatgccattttgctaatttgatgacgtggcagt 11026603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 502 - 569
Target Start/End: Complemental strand, 25107282 - 25107215
Alignment:
Q  502 aggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    ||||||||||| || | ||||||||||||||||||||||||||| || |||||||| ||||| |||||    
T  25107282 aggattagcgattagagagaccaatttttaaatgacccctaattgcagggatgaaacacatacttaag 25107215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 390 - 433
Target Start/End: Complemental strand, 43105414 - 43105371
Alignment:
Q  390 agggtatttttgtccattcccatgccattttgctaatttgatga 433  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  43105414 agggtatttttgtcaattcccatgccattttgctaatttgatga 43105371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 461 - 568
Target Start/End: Complemental strand, 53756854 - 53756747
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| ||||||||  ||  |||| | ||||| ||| ||||   | ||||||||||| ||||||||||| ||| ||||||||||    
T  53756854 acgaaattttaaatgattaaacaatgcaagggtaaattactaagattaacgattacatgaatcaatttttaaacgacccctaattgcaaagatgaaatac 53756755  T
Q  561 atatttaa 568  Q
    ||||||||    
T  53756754 atatttaa 53756747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 520 - 570
Target Start/End: Complemental strand, 9292294 - 9292244
Alignment:
Q  520 gaccaatttttaaatgacccctaattacaaggatgaaatacatatttaagt 570  Q
    |||||||||||||| || |||||||| ||||||||||||||||||||||||    
T  9292294 gaccaatttttaaacgatccctaattgcaaggatgaaatacatatttaagt 9292244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 503 - 565
Target Start/End: Original strand, 23276343 - 23276405
Alignment:
Q  503 ggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatt 565  Q
    |||||||||| ||||  |||||||||||||||||||||||||| || |||||||| |||||||    
T  23276343 ggattagcgattacagggaccaatttttaaatgacccctaattgcagggatgaaacacatatt 23276405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 495 - 569
Target Start/End: Original strand, 53856409 - 53856483
Alignment:
Q  495 gtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    |||| |||||||||| |||||||| |||||||||||||  |||||||| || || |||| |||||||||||||||    
T  53856409 gtttgcaaggattagtgaatacaaggaccaatttttaagcgacccctatttgcagggatcaaatacatatttaag 53856483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 391 - 448
Target Start/End: Original strand, 32717025 - 32717082
Alignment:
Q  391 gggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaa 448  Q
    ||||||||||||||||||| ||| ||||||||||||||||||| || ||||| |||||    
T  32717025 gggtatttttgtccattcctatgtcattttgctaatttgatgacgtggcagtaattaa 32717082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 520 - 569
Target Start/End: Original strand, 34142595 - 34142644
Alignment:
Q  520 gaccaatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    |||||||||||||| ||||||||||| ||||||| |||||||||||||||    
T  34142595 gaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaag 34142644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 391 - 447
Target Start/End: Original strand, 1757224 - 1757280
Alignment:
Q  391 gggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcatta 447  Q
    ||||||||||||| |||| |||||||||||||||||||||||| || ||||| ||||    
T  1757224 gggtatttttgtcaattctcatgccattttgctaatttgatgacgtggcagtgatta 1757280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 505 - 569
Target Start/End: Original strand, 2796459 - 2796523
Alignment:
Q  505 attagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    |||||||||||||  ||||||||||||||  || ||||||| |||||||||| ||||||||||||    
T  2796459 attagcgaatacatggaccaatttttaaacaactcctaattgcaaggatgaagtacatatttaag 2796523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 388 - 480
Target Start/End: Complemental strand, 29192218 - 29192126
Alignment:
Q  388 tgagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaa 480  Q
    |||||||||||||||| |||| |||| |||||||||||||| |||| || ||||| ||||| ||||   | | |||||||||||||| |||||    
T  29192218 tgagggtatttttgtcaattctcatgtcattttgctaatttaatgacgtggcagtgattaatcgggaagagggacgaaattttaaatgattaa 29192126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 391 - 447
Target Start/End: Complemental strand, 37249379 - 37249323
Alignment:
Q  391 gggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcatta 447  Q
    ||||||||||||| ||| ||||||||||||||||||||||||| || ||||| ||||    
T  37249379 gggtatttttgtcaatttccatgccattttgctaatttgatgacgtggcagtgatta 37249323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 391 - 447
Target Start/End: Complemental strand, 48188558 - 48188502
Alignment:
Q  391 gggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcatta 447  Q
    ||||||||||||| ||||||||| ||||||||||||||||||| || ||||| ||||    
T  48188558 gggtatttttgtcaattcccatggcattttgctaatttgatgacgtggcagtgatta 48188502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 423 - 562
Target Start/End: Original strand, 4323482 - 4323621
Alignment:
Q  423 taatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagac 522  Q
    ||||||||||| || |||||||||||| ||||  |   ||||| |||||||| |||||| ||||||||  || ||| | ||||||||||| ||||  |||    
T  4323482 taatttgatgacgtggcagtcattaagtgggttcagtgacgaatttttaaatgattaaacaatgcaaggttaatttgccaggattagcgattacagggac 4323581  T
Q  523 caatttttaaatgacccctaattacaaggatgaaatacat 562  Q
     |||||||||| ||| ||||||| || || ||||| ||||    
T  4323582 gaatttttaaacgacgcctaattgcaggggtgaaacacat 4323621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 388 - 562
Target Start/End: Complemental strand, 10294744 - 10294576
Alignment:
Q  388 tgagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgc 487  Q
    ||||||||||||||| |||| ||||| |||||||||||||||||||       || ||||||  ||| |||| |||||||||||||| |||||| ||| |    
T  10294744 tgagggtatttttgtacatttccatgtcattttgctaatttgatga------cgtgattaagttggttaaaggacgaaattttaaatgattaaacaatac 10294651  T
Q  488 aagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    |||  ||  ||   | ||||||| | ||||  ||| |||||||||||||| ||||||| |||||| |||| ||||    
T  10294650 aagggtaaattgtcatgattagcaattacagggactaatttttaaatgacgcctaattgcaaggacgaaacacat 10294576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 391 - 433
Target Start/End: Original strand, 43105754 - 43105796
Alignment:
Q  391 gggtatttttgtccattcccatgccattttgctaatttgatga 433  Q
    ||||||||||||| ||||| |||||||||||||||||||||||    
T  43105754 gggtatttttgtcaattccaatgccattttgctaatttgatga 43105796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 444 - 545
Target Start/End: Original strand, 21185996 - 21186097
Alignment:
Q  444 attaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaa 543  Q
    |||||| ||||||| | |||||||||||||| ||||| |  ||||||  || ||| | ||||||| ||| ||||   |||||||||||||||||||||||    
T  21185996 attaagtgggtcaagggacgaaattttaaatgattaaggtttgcaagggtaatttgccaggattaacgattacatgtaccaatttttaaatgacccctaa 21186095  T
Q  544 tt 545  Q
    ||    
T  21186096 tt 21186097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 520 - 569
Target Start/End: Original strand, 26463963 - 26464012
Alignment:
Q  520 gaccaatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    |||||||||||||| || | |||||| |||||||||||||||||||||||    
T  26463963 gaccaatttttaaacgatctctaattgcaaggatgaaatacatatttaag 26464012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 520 - 569
Target Start/End: Original strand, 55052625 - 55052673
Alignment:
Q  520 gaccaatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    ||||||||||||||  |||||||||||||||||| |||||||||||||||    
T  55052625 gaccaatttttaaaa-acccctaattacaaggatcaaatacatatttaag 55052673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 461 - 565
Target Start/End: Original strand, 25108413 - 25108517
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| ||||| |  |||| |   ||||| | ||||||||| | ||||  |||||| ||||||||||||||||||| || |||||||| ||    
T  25108413 acgaaattttaaatgattaacgtttgcagggacagtttgccaggattagcaattacagggaccaaattttaaatgacccctaattgcagggatgaaacac 25108512  T
Q  561 atatt 565  Q
    |||||    
T  25108513 atatt 25108517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 500 - 564
Target Start/End: Complemental strand, 40033590 - 40033526
Alignment:
Q  500 caaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatat 564  Q
    ||||||||||||||||||  || ||||||||||| || || ||||| ||||||||||||| ||||    
T  40033590 caaggattagcgaatacatggatcaatttttaaacgatccttaattgcaaggatgaaatatatat 40033526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 521 - 568
Target Start/End: Original strand, 40506165 - 40506213
Alignment:
Q  521 accaatttttaaatgacccc-taattacaaggatgaaatacatatttaa 568  Q
    ||||| |||||||||||||| ||||| ||||||||||||||||||||||    
T  40506165 accaacttttaaatgaccccataattgcaaggatgaaatacatatttaa 40506213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 389 - 433
Target Start/End: Original strand, 43998389 - 43998433
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatga 433  Q
    |||| ||||||||||||||| |||| |||||||||||||||||||    
T  43998389 gaggatatttttgtccattctcatggcattttgctaatttgatga 43998433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 502 - 565
Target Start/End: Complemental strand, 23272893 - 23272830
Alignment:
Q  502 aggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatt 565  Q
    ||||||||||| |||| | |||||||||||||| | |||||||| || |||||||| |||||||    
T  23272893 aggattagcgattacagataccaatttttaaataatccctaattgcagggatgaaagacatatt 23272830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 502 - 569
Target Start/End: Complemental strand, 33154946 - 33154879
Alignment:
Q  502 aggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    ||||||| ||| ||||  |||||||||||||||||||||||||| || ||| |||| ||||| |||||    
T  33154946 aggattaacgattacagggaccaatttttaaatgacccctaattgcatggacgaaacacatacttaag 33154879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 391 - 433
Target Start/End: Complemental strand, 11026117 - 11026075
Alignment:
Q  391 gggtatttttgtccattcccatgccattttgctaatttgatga 433  Q
    ||||||||||||| ||| |||||| ||||||||||||||||||    
T  11026117 gggtatttttgtcaatttccatgcgattttgctaatttgatga 11026075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 452 - 562
Target Start/End: Original strand, 33506257 - 33506367
Alignment:
Q  452 ggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaagg 551  Q
    |||||||| || ||||||||||| |||||| |||| |||| ||  || | ||||||||||| ||||  ||| ||||||||||| || |||||||  ||||    
T  33506257 ggtcaaaggacaaaattttaaatgattaaacaatgtaagagtaaattgccaggattagcgattacagggactaatttttaaataacgcctaattgaaagg 33506356  T
Q  552 atgaaatacat 562  Q
    | |||| ||||    
T  33506357 acgaaacacat 33506367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 396 - 430
Target Start/End: Original strand, 41989541 - 41989575
Alignment:
Q  396 tttttgtccattcccatgccattttgctaatttga 430  Q
    ||||||||||||| |||||||||||||||||||||    
T  41989541 tttttgtccattctcatgccattttgctaatttga 41989575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 391 - 565
Target Start/End: Complemental strand, 47856567 - 47856393
Alignment:
Q  391 gggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaag 490  Q
    |||||||||||||  || | |||| ||||||||||||| |||| ||   | | ||||||  |||||||  || ||||||||||| ||||||   ||||||    
T  47856567 gggtatttttgtcattttctatgctattttgctaatttaatgacgtgaaattgattaagttggtcaaatgacaaaattttaaatgattaaactttgcaag 47856468  T
Q  491 actagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatt 565  Q
    | || |||   ||||||| ||| ||||| |||||||||||||| ||| | ||||| || ||| |||| |||||||    
T  47856467 agtaatttgtcaggattaacgattacaaggaccaatttttaaacgacgcttaattgcagggacgaaacacatatt 47856393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #105
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 495 - 569
Target Start/End: Complemental strand, 53856091 - 53856017
Alignment:
Q  495 gtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    |||| |||| ||||| |||| ||| |||||||||||||  |||||||| || || |||| |||||||||||||||    
T  53856091 gtttgcaagaattagtgaatgcaaggaccaatttttaagcgacccctatttgcagggatcaaatacatatttaag 53856017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #106
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 431 - 552
Target Start/End: Complemental strand, 10770630 - 10770509
Alignment:
Q  431 tgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaattttt 530  Q
    |||||| ||||| ||||||  |||| ||| || ||||||||||| |||||  | |||||| |||  || | ||||||||| | ||||  ||| |||||||    
T  10770630 tgatgtggcagtgattaagttggtccaaggaccaaattttaaatgattaacaattgcaaggctaaattgccaggattagcaattacagggacgaattttt 10770531  T
Q  531 aaatgacccctaattacaagga 552  Q
    ||||||| ||||||| ||||||    
T  10770530 aaatgacgcctaattgcaagga 10770509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #107
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 461 - 562
Target Start/End: Original strand, 33156312 - 33156413
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| |||| |||  ||  || | | ||||| ||| ||||| ||| |||||||||||||| ||||||| |||||| |||| ||    
T  33156312 acgaaattttaaatgattaaacaatgaaagggtaaattgccaagattaacgattacaatgactaatttttaaatgacgcctaattgcaaggacgaaacac 33156411  T
Q  561 at 562  Q
    ||    
T  33156412 at 33156413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 303; Significance: 1e-170; HSPs: 124)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 50 - 448
Target Start/End: Complemental strand, 23455474 - 23455077
Alignment:
Q  50 tatagaaatgagaggaaatagctgcaacatcaatcacattcaacactgccgcaaatcgatctacgtcgtagttaccatcatctttggccagagcaccgcc 149  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||  |||||| |||| ||||  ||||||||||||    
T  23455474 tatagaaatgagtggaaatagctgcaacatcaatcacattcaacactgccgtaaatcgatctacgtcgccgttaccgtcatatttgatcagagcaccgcc 23455375  T
Q  150 gcgagcagctccttcctccagcgaccaccacgtgcactaccgattccgtctggattgaggtttcatcttccttctcctttattggttcactttctttttt 249  Q
     ||||||||||||||||||| | |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  23455374 acgagcagctccttcctccaacaaccaccacgtgcactaccaattccgtctggattgaggtttcatcttccttctcctttattggttcattttctttttt 23455275  T
Q  250 cactatcgctttgctgcatgtgttctgtttggaaacttgaagaaaaagaatgaagcagggagatggatgatttctcagagaagaaaataatgaattaggt 349  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||| ||||||| ||||    
T  23455274 cactatcgctttattgcatgtgttctgtttggaaacttgaagaaaaagaatgaagcagggagattgatgatttctcattgaagaaaa-aatgaatcaggt 23455176  T
Q  350 ttctcaagggaagcttgaaggagtgaagaagattaatttgagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaa 448  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||    
T  23455175 ttctcaagggaagcttgaaggagtgaagaagattaatttgagggtatttttgtccattcccatgccattttgctaatttgatgacgtggcagtgattaa 23455077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 390 - 569
Target Start/End: Complemental strand, 147500 - 147321
Alignment:
Q  390 agggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaa 489  Q
    |||| ||||||||||||||||||||||||||||||||||||||| || ||||| |||||  |||   | | || ||||||||||| ||||| || |||||    
T  147500 agggcatttttgtccattcccatgccattttgctaatttgatgacgtggcagtaattaattgggctcagggacaaaattttaaattattaatgattgcaa 147401  T
Q  490 gactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    ||||||||| ||||||||||||||||||  |||||||||||||| |||||||||||  | ||||||||||||||||||||    
T  147400 gactagtttgcaaggattagcgaatacagggaccaatttttaaacgacccctaattgtagggatgaaatacatatttaag 147321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 392 - 562
Target Start/End: Original strand, 39667023 - 39667193
Alignment:
Q  392 ggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaaga 491  Q
    ||||||||||||||||| |||||||||||||||||||||||| || || || ||||||  |||||||  |||||||||||||| |||||| ||||||||     
T  39667023 ggtatttttgtccattctcatgccattttgctaatttgatgacgtggcggtgattaagttggtcaaaagacgaaattttaaatgattaaacaatgcaagg 39667122  T
Q  492 ctagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
     || ||||| ||||||| ||| ||||  |||||||||||||||||||| |||||||||||| |||| ||||    
T  39667123 gtaatttaccaggattaacgattacagggaccaatttttaaatgacccgtaattacaaggacgaaacacat 39667193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 439 - 569
Target Start/End: Original strand, 52909549 - 52909679
Alignment:
Q  439 cagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacc 538  Q
    |||| ||||||  |||||||| |||||||||||||||||||| || |||||| ||||||| |||||||||||||||||| |||||||||||||||||| |    
T  52909549 cagtgattaagttggtcaaaggacgaaattttaaataattaatgattgcaaggctagtttgcaaggattagcgaatacatagaccaatttttaaatgatc 52909648  T
Q  539 cctaattacaaggatgaaatacatatttaag 569  Q
    | ||||| |||||||||||||||||||||||    
T  52909649 cataattgcaaggatgaaatacatatttaag 52909679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 389 - 562
Target Start/End: Complemental strand, 27069092 - 27068919
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||  |||||||| |||||||||||||| |||||| ||||||    
T  27069092 gagggtatttttgtccattcccatgccattttgctaatttgatgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaatgca 27068993  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    ||  ||  || | ||||||||||| ||||  ||| |||||||||||||  ||||||| |||||| |||| ||||    
T  27068992 agggtaaattgccaggattagcgattacagggactaatttttaaatgatgcctaattgcaaggacgaaacacat 27068919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 390 - 569
Target Start/End: Original strand, 148002 - 148181
Alignment:
Q  390 agggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaa 489  Q
    |||| |||||||||||||  |||||||||||||||||||||||| ||  |||| |||||  |||   | | |||||||||||||| ||||| || |||||    
T  148002 agggcatttttgtccattttcatgccattttgctaatttgatgacgtgacagtaattaactgggctcatggacgaaattttaaatgattaatgattgcaa 148101  T
Q  490 gactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    ||||||||| ||||||||| |||||| |  |||||||||||||| ||||||||||| || ||||||||||||||||||||    
T  148102 gactagtttgcaaggattaacgaataaagggaccaatttttaaacgacccctaattgcagggatgaaatacatatttaag 148181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 431 - 569
Target Start/End: Complemental strand, 10780853 - 10780715
Alignment:
Q  431 tgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaattttt 530  Q
    |||||| ||||||||||| |||||||||| | |||||||||||| ||||| || |||||| ||||||| ||||||||||||||| ||  |||||||||||    
T  10780853 tgatgtggcagtcattaatcgggtcaaaggatgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatgcatggaccaattttt 10780754  T
Q  531 aaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    ||| ||||||||||| ||||||| |||||||||||||||    
T  10780753 aaacgacccctaattgcaaggatcaaatacatatttaag 10780715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 431 - 569
Target Start/End: Complemental strand, 10974462 - 10974324
Alignment:
Q  431 tgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaattttt 530  Q
    |||||| ||||||||||| |||||||||| | |||||||||||| ||||| || |||||| ||||||| ||||||||||||||| ||  |||||||||||    
T  10974462 tgatgtggcagtcattaatcgggtcaaaggatgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatgcatggaccaattttt 10974363  T
Q  531 aaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    ||| ||||||||||| ||||||| |||||||||||||||    
T  10974362 aaacgacccctaattgcaaggatcaaatacatatttaag 10974324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 431 - 569
Target Start/End: Original strand, 24350720 - 24350858
Alignment:
Q  431 tgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaattttt 530  Q
    |||||| ||||||||||| |||||||||| |||||||||||||| ||||| || |||||  ||||||| ||||||||||||||| ||  |||||||||||    
T  24350720 tgatgtggcagtcattaatcgggtcaaaggacgaaattttaaatgattaatgattgcaaagctagtttgcaaggattagcgaatgcagggaccaattttt 24350819  T
Q  531 aaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    ||| ||||||||||| ||||||| |||||||||||||||    
T  24350820 aaacgacccctaattgcaaggatcaaatacatatttaag 24350858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 439 - 569
Target Start/End: Original strand, 51692815 - 51692945
Alignment:
Q  439 cagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacc 538  Q
    |||| ||||||  |||||||| |||||||||||||| ||||| || |||||| ||||||| ||||||||||||||||||  |||||||||||||| ||||    
T  51692815 cagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacagggaccaatttttaaacgacc 51692914  T
Q  539 cctaattacaaggatgaaatacatatttaag 569  Q
    ||||||| |||||||||||||||||||||||    
T  51692915 cctaattgcaaggatgaaatacatatttaag 51692945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 389 - 557
Target Start/End: Original strand, 10408133 - 10408301
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    |||||||||||||||||||| |||  |||||||||||||||||||||| ||||| ||||||  |||||||| |||||||||||||| |||||| ||||||    
T  10408133 gagggtatttttgtccattctcatatcattttgctaatttgatgatgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaatgca 10408232  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaa 557  Q
    ||  ||  || | ||||||||||| ||||  ||| |||||||||||||| ||||||| |||||| ||||    
T  10408233 agggtaaattgccaggattagcgattacagggactaatttttaaatgacgcctaattgcaaggacgaaa 10408301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 389 - 557
Target Start/End: Original strand, 45463317 - 45463485
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    |||||| |||||||||||||||||||||||||||||||||||||| || | ||| ||||||  ||||||||||| ||||||||||| |||||| ||||||    
T  45463317 gagggtgtttttgtccattcccatgccattttgctaatttgatgacgtggtagtgattaagttggtcaaagaacaaaattttaaatgattaaacaatgca 45463416  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaa 557  Q
    ||  ||| || | ||||||||| | ||||  ||| |||||||||||||| ||||||| |||||| ||||    
T  45463417 agggtagattgccaggattagcaattacagggactaatttttaaatgacgcctaattgcaaggacgaaa 45463485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 438 - 569
Target Start/End: Original strand, 7452098 - 7452229
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  |||||||| || ||||||||||| ||||| || |||||| ||||||| |||||||||||||||||| ||||||||||||||| |||    
T  7452098 gcagtgattaagttggtcaaaggactaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacagagaccaatttttaaacgac 7452197  T
Q  538 ccctaattacaaggatgaaatacatatttaag 569  Q
    |||||||| ||||||| |||||||||||||||    
T  7452198 ccctaattgcaaggatcaaatacatatttaag 7452229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 430 - 569
Target Start/End: Original strand, 39539205 - 39539344
Alignment:
Q  430 atgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttt 529  Q
    ||||||| |||||||||||  ||||||||| |||||||||||||| ||||||||||||||| ||| ||| |||| |||| ||| ||||  ||||||||||    
T  39539205 atgatgtggcagtcattaactgggtcaaaggacgaaattttaaatgattaaagaatgcaaggctaatttgcaagaattaacgattacattgaccaatttt 39539304  T
Q  530 taaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    |||| ||||| ||||| |||||||||||||||||||||||    
T  39539305 taaacgacccttaattgcaaggatgaaatacatatttaag 39539344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 388 - 562
Target Start/End: Complemental strand, 54858743 - 54858569
Alignment:
Q  388 tgagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgc 487  Q
    ||||||||||||||||  |||||||||||||||||||||||||||| || ||||| ||||||  |||||||| |||||||||||||| |||||| |||||    
T  54858743 tgagggtatttttgtctgttcccatgccattttgctaatttgatgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaatgc 54858644  T
Q  488 aagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    |||  ||  ||   ||||||||||| ||||  ||| |||||||||||||| ||||||| |||||| |||| ||||    
T  54858643 aagggtaaattgtcaggattagcgattacagggactaatttttaaatgacgcctaattgcaaggacgaaacacat 54858569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 391 - 569
Target Start/End: Original strand, 55867362 - 55867540
Alignment:
Q  391 gggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaag 490  Q
    ||||||||||||| ||||| ||| ||||||||||||||||||| || ||||| |||||  |||   | | |||||||||||||| |||||| ||||||||    
T  55867362 gggtatttttgtcaattccaatgtcattttgctaatttgatgacgtggcagtgattaactgggaatagggacgaaattttaaatgattaaacaatgcaag 55867461  T
Q  491 actagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
      |||||| ||||||||| ||| ||||  |||||||||||||| ||||||||||| || |||| |||||||||||||||    
T  55867462 ggtagtttgcaaggattaacgattacatggaccaatttttaaacgacccctaattgcagggatcaaatacatatttaag 55867540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 389 - 562
Target Start/End: Complemental strand, 45463255 - 45463082
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    |||||||||||||||||||||||||| ||||||||||||||||||  | | ||| ||||||  |||||||  |||||||||||||| |||||| ||||||    
T  45463255 gagggtatttttgtccattcccatgctattttgctaatttgatgacttggtagtgattaagttggtcaaatgacgaaattttaaatgattaaacaatgca 45463156  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    ||  ||  || | ||||||||||| |||| |||| |||||||||||||| ||||||| |||||| |||| ||||    
T  45463155 agggtaaattgccaggattagcgattacagagactaatttttaaatgacgcctaattgcaaggacgaaacacat 45463082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 389 - 562
Target Start/End: Complemental strand, 52573410 - 52573237
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    |||||||||||||||||||| |||||||||||||||||||||||| || ||||| ||||||  |||||||| |||||||||||||| |||||| |||| |    
T  52573410 gagggtatttttgtccattctcatgccattttgctaatttgatgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaatgta 52573311  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    ||| ||  || | ||||||||||| ||||   || |||||||||||||| ||||||| ||| || |||| ||||    
T  52573310 agagtaaattgccaggattagcgattacaggtactaatttttaaatgacgcctaattgcaaagacgaaacacat 52573237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 438 - 570
Target Start/End: Complemental strand, 44967202 - 44967070
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  |||||||| || ||||||||||| ||||| || |||||| |||||||  ||||||||||||||||| ||||||||||||||| |||    
T  44967202 gcagtgattaagttggtcaaaggactaaattttaaatgattaatgattgcaaggctagtttgtaaggattagcgaatacagagaccaatttttaaacgac 44967103  T
Q  538 ccctaattacaaggatgaaatacatatttaagt 570  Q
    |||||||| ||||||| ||||||||||||||||    
T  44967102 ccctaattgcaaggatcaaatacatatttaagt 44967070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 391 - 569
Target Start/End: Original strand, 11447977 - 11448155
Alignment:
Q  391 gggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaaga-acgaaattttaaataattaaagaatgcaa 489  Q
    ||||||||||||| |||  |||||||||||| |||||||||||||| ||||| ||||| | ||  | ||  |||||||||||||| |||||| |||||||    
T  11447977 gggtatttttgtcaattttcatgccattttgttaatttgatgatgtggcagtgattaa-ctggaaatagtgacgaaattttaaatgattaaacaatgcaa 11448075  T
Q  490 gactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    |  || ||| ||||||||||||| |||| ||| ||||||||||| |||||||||||||| ||| ||||||||||||||||    
T  11448076 gggtaatttgcaaggattagcgattacagagatcaatttttaaacgacccctaattacagggacgaaatacatatttaag 11448155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 438 - 569
Target Start/End: Complemental strand, 17356058 - 17355927
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  |||||||  |||||||||||||| ||||| ||||||||||||||||| ||| ||||||||||||||   ||||||||||||| |||    
T  17356058 gcagtgattaagttggtcaaatgacgaaattttaaatgattaatgaatgcaagactagtttgcaaagattagcgaatacagcaaccaatttttaaacgac 17355959  T
Q  538 ccctaattacaaggatgaaatacatatttaag 569  Q
     ||||||| |||||||||||||||||||||||    
T  17355958 tcctaattgcaaggatgaaatacatatttaag 17355927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 438 - 568
Target Start/End: Complemental strand, 54086828 - 54086698
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  |||||||| || ||||||||||| ||||| || | ||||||||| ||  ||||||||||||||||| ||||||||||||||| |||    
T  54086828 gcagtgattaagttggtcaaaggacaaaattttaaatgattaatgattacaagactagctttgaaggattagcgaatacagagaccaatttttaaacgac 54086729  T
Q  538 ccctaattacaaggatgaaatacatatttaa 568  Q
    |||||||| ||||||||||||||||||||||    
T  54086728 ccctaattgcaaggatgaaatacatatttaa 54086698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 389 - 562
Target Start/End: Original strand, 50504069 - 50504242
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    ||||||||||||||||||||||||| |||||||||||||||||||  | | ||| ||||||   ||||||| |||||||||||||| |||||| ||||||    
T  50504069 gagggtatttttgtccattcccatgtcattttgctaatttgatgacttgggagtgattaagtttgtcaaaggacgaaattttaaatgattaaacaatgca 50504168  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    ||  ||  || |  |||||| ||| |||| |||| |||||||||||||| |||||||||||||| |||| ||||    
T  50504169 agggtaaattgcctggattaacgattacagagactaatttttaaatgacgcctaattacaaggacgaaacacat 50504242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 389 - 490
Target Start/End: Complemental strand, 51859589 - 51859488
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||  |||||||| |||||||||||||| |||||| ||||||    
T  51859589 gagggtatttttgtccattctcatgccattttgctaatttgatgatgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaaataatgca 51859490  T
Q  489 ag 490  Q
    ||    
T  51859489 ag 51859488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 389 - 562
Target Start/End: Original strand, 54858804 - 54858977
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    |||||||||||||||||||| ||||||||||||||||||||||||  | | ||| ||||||  |||||||| |||||||||||||| |||||| ||||||    
T  54858804 gagggtatttttgtccattcacatgccattttgctaatttgatgacttggtagtgattaagttggtcaaaggacgaaattttaaatgattaaacaatgca 54858903  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    ||  ||  || | ||||||| ||| ||||  ||| |||||||||||||| ||||||| |||||| |||| ||||    
T  54858904 agggtaaattgccaggattaacgattacatggactaatttttaaatgacgcctaattgcaaggacgaaacacat 54858977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 461 - 569
Target Start/End: Original strand, 10781802 - 10781910
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| ||||| || |||||| ||||||| ||||||||||||||||||  |||||||||||||| ||||||||||| ||||||| ||||||    
T  10781802 acgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacatggaccaatttttaaacgacccctaattgcaaggatcaaatac 10781901  T
Q  561 atatttaag 569  Q
    |||||||||    
T  10781902 atatttaag 10781910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 464 - 568
Target Start/End: Original strand, 11108161 - 11108265
Alignment:
Q  464 aaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacata 563  Q
    ||||||||||| ||||| || |||||||||||||| ||||||||||||||||||| || ||||||||||| || |||||||| |||||||||||||||||    
T  11108161 aaattttaaatgattaatgattgcaagactagtttgcaaggattagcgaatacaaggatcaatttttaaacgatccctaattgcaaggatgaaatacata 11108260  T
Q  564 tttaa 568  Q
    |||||    
T  11108261 tttaa 11108265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 461 - 569
Target Start/End: Complemental strand, 24349784 - 24349676
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| ||||| || |||||| ||||||| ||||||||||||||||||  |||||||||||||| ||||||||||| ||||||| ||||||    
T  24349784 acgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacagggaccaatttttaaacgacccctaattgcaaggatcaaatac 24349685  T
Q  561 atatttaag 569  Q
    |||||||||    
T  24349684 atatttaag 24349676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 452 - 568
Target Start/End: Complemental strand, 35028117 - 35028001
Alignment:
Q  452 ggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaagg 551  Q
    |||||||  |||||||||||||| ||||| || |||||| ||||||| ||||||||||||||||||   ||||||||||||| ||||||||||| |||||    
T  35028117 ggtcaaaagacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacaggaaccaatttttaaacgacccctaattgcaagg 35028018  T
Q  552 atgaaatacatatttaa 568  Q
    |||||||||||||||||    
T  35028017 atgaaatacatatttaa 35028001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 452 - 568
Target Start/End: Original strand, 37248514 - 37248630
Alignment:
Q  452 ggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaagg 551  Q
    |||||||| ||||||||| |||| ||||| || |||||||||||||| ||||||||||||| ||||  |||||||||||||| ||||||||||| |||||    
T  37248514 ggtcaaaggacgaaatttaaaatgattaatgattgcaagactagtttgcaaggattagcgattacagggaccaatttttaaacgacccctaattgcaagg 37248613  T
Q  552 atgaaatacatatttaa 568  Q
    || ||||||||||||||    
T  37248614 atcaaatacatatttaa 37248630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 438 - 569
Target Start/End: Original strand, 13058277 - 13058408
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  |||||||| || ||||||||||| ||||| || |||||| ||||||| ||||||||||||||||||  |||||||||||||| |||    
T  13058277 gcagtgattaagttggtcaaaggactaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacagggaccaatttttaaacgac 13058376  T
Q  538 ccctaattacaaggatgaaatacatatttaag 569  Q
    |||| ||| ||||||| |||||||||||||||    
T  13058377 cccttattgcaaggatcaaatacatatttaag 13058408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 454 - 569
Target Start/End: Complemental strand, 34765497 - 34765382
Alignment:
Q  454 tcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggat 553  Q
    |||||| |||||||||||||| ||||| || |||||| ||||||| ||||||||||||||||||| |||| ||||||||| ||||| ||||| |||||||    
T  34765497 tcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacaaggaccgatttttaaacgacccttaattgcaaggat 34765398  T
Q  554 gaaatacatatttaag 569  Q
     |||||||||||||||    
T  34765397 aaaatacatatttaag 34765382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 438 - 569
Target Start/End: Original strand, 46661209 - 46661340
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  |||||||| |||||||||||||| ||||| || |||||| ||||||| | ||||||||  ||||||  |||||||||||||| |||    
T  46661209 gcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcgaggattagtaaatacagggaccaatttttaaacgac 46661308  T
Q  538 ccctaattacaaggatgaaatacatatttaag 569  Q
    |||||||| |||||||||||||||||||||||    
T  46661309 ccctaattgcaaggatgaaatacatatttaag 46661340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 431 - 569
Target Start/End: Original strand, 1179088 - 1179226
Alignment:
Q  431 tgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaattttt 530  Q
    |||||| ||||| ||||||  ||| |||| | |||||||||||| ||||| || |||||| ||||||| ||||||||||||||||||  |||||||||||    
T  1179088 tgatgtggcagtgattaagttggttaaaggatgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacatggaccaattttt 1179187  T
Q  531 aaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    ||| ||||||||||| ||| ||| |||||||||||||||    
T  1179188 aaacgacccctaattgcaaagataaaatacatatttaag 1179226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 431 - 569
Target Start/End: Original strand, 14802023 - 14802161
Alignment:
Q  431 tgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaattttt 530  Q
    |||||| ||||| ||||||  |||||||| |||||||||||||| ||||| || ||||||| |||||| | || |||||||||||||| |||||||||||    
T  14802023 tgatgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaagaatagtttgctagaattagcgaatacaaggaccaattttt 14802122  T
Q  531 aaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    ||| || | |||||| ||||||||||||| |||||||||    
T  14802123 aaacgatctctaattgcaaggatgaaatatatatttaag 14802161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 393 - 562
Target Start/End: Complemental strand, 3032760 - 3032591
Alignment:
Q  393 gtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagac 492  Q
    ||||||||||||||||| ||||||||||||||||||||| |  | || || ||||||  |||||||  |||||||||||||| |||||| ||||||||      
T  3032760 gtatttttgtccattcctatgccattttgctaatttgataacttggcggtgattaagttggtcaaatgacgaaattttaaatgattaaacaatgcaaggg 3032661  T
Q  493 tagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    ||  || | ||||||||||| ||||| ||| |||||||||||||| ||||||| |||||| |||| ||||    
T  3032660 taaattgccaggattagcgattacaaggactaatttttaaatgacgcctaattgcaaggacgaaacacat 3032591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 452 - 569
Target Start/End: Original strand, 23613587 - 23613704
Alignment:
Q  452 ggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaagg 551  Q
    ||||||||||| ||||||||||| ||||  || |||||||||| ||| ||||||||||||||||||  || ||||||||||| ||||||||||| |||||    
T  23613587 ggtcaaagaactaaattttaaatgattagtgattgcaagactaatttgcaaggattagcgaatacagggatcaatttttaaacgacccctaattgcaagg 23613686  T
Q  552 atgaaatacatatttaag 569  Q
    || |||||||||||||||    
T  23613687 atcaaatacatatttaag 23613704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 389 - 562
Target Start/End: Original strand, 27069154 - 27069327
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    |||||||||||||||||||||||||||||||||||||||||||||  | || || |||||   |||||||  |||||||||||||| |||||| ||||||    
T  27069154 gagggtatttttgtccattcccatgccattttgctaatttgatgacttggcggtgattaaattggtcaaaagacgaaattttaaatgattaaacaatgca 27069253  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    ||  ||  || | ||||||||| | ||||  ||| |||||||||||||| ||||||| |||||| |||| ||||    
T  27069254 agggtaaattgccaggattagcaattacagggactaatttttaaatgacgcctaattgcaaggacgaaacacat 27069327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 452 - 569
Target Start/End: Complemental strand, 36008963 - 36008846
Alignment:
Q  452 ggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaagg 551  Q
    |||||||| || ||||||||||| ||||| || |||||| ||||||| ||| ||||||||||||||  |||||||||||||| || ||||||||||||||    
T  36008963 ggtcaaaggactaaattttaaatgattaatgattgcaaggctagtttgcaatgattagcgaatacagggaccaatttttaaacgatccctaattacaagg 36008864  T
Q  552 atgaaatacatatttaag 569  Q
    || |||||||||||||||    
T  36008863 atcaaatacatatttaag 36008846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 452 - 569
Target Start/End: Complemental strand, 49879326 - 49879209
Alignment:
Q  452 ggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaagg 551  Q
    |||||||| |||||||||||||| ||||| || |||||| ||||||| ||||||||||| | ||||  |||||||||||||| ||||||||||| |||||    
T  49879326 ggtcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcaattacagggaccaatttttaaacgacccctaattgcaagg 49879227  T
Q  552 atgaaatacatatttaag 569  Q
    || |||||||||||||||    
T  49879226 atcaaatacatatttaag 49879209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 452 - 569
Target Start/End: Complemental strand, 50418787 - 50418670
Alignment:
Q  452 ggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaagg 551  Q
    |||||||| |||||||||||||| ||||| || |||||| ||||||| ||||||||| ||| ||||  |||||||||||||| ||||||||||| |||||    
T  50418787 ggtcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattaacgattacagggaccaatttttaaacgacccctaattgcaagg 50418688  T
Q  552 atgaaatacatatttaag 569  Q
    || |||||||||||||||    
T  50418687 atcaaatacatatttaag 50418670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 389 - 490
Target Start/End: Complemental strand, 50504007 - 50503906
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||  |||||||| ||| |||||||||| |||||| ||||||    
T  50504007 gagggtatttttgtccattcccatgccattttgctaatttgatgacgtggcagtgattaagttggtcaaaggacggaattttaaatgattaaacaatgca 50503908  T
Q  489 ag 490  Q
    ||    
T  50503907 ag 50503906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 452 - 568
Target Start/End: Complemental strand, 37976272 - 37976156
Alignment:
Q  452 ggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaagg 551  Q
    |||||||| |||||||||||||| ||||| || |||||||||||||| ||| ||||||||||||||   |||| |||||||| |||| |||||| |||||    
T  37976272 ggtcaaaggacgaaattttaaatgattaatgattgcaagactagtttgcaaagattagcgaatacaggaaccagtttttaaacgacctctaattgcaagg 37976173  T
Q  552 atgaaatacatatttaa 568  Q
    |||||||||||||||||    
T  37976172 atgaaatacatatttaa 37976156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 388 - 562
Target Start/End: Complemental strand, 10408072 - 10407898
Alignment:
Q  388 tgagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgc 487  Q
    |||||||||||||||||||| |||||||||||||||||||||||||  | | ||| ||||||  | |||||| |||||||||||||| |||||| |||||    
T  10408072 tgagggtatttttgtccatttccatgccattttgctaatttgatgacttggtagtgattaagttgatcaaaggacgaaattttaaatgattaaacaatgc 10407973  T
Q  488 aagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    |||  ||  ||   ||||||||||| ||||  ||  |||||||||||||| ||||||| |||||| |||| ||||    
T  10407972 aagggtaaattgtcaggattagcgattacagggagtaatttttaaatgactcctaattgcaaggacgaaacacat 10407898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 463 - 569
Target Start/End: Original strand, 18831637 - 18831743
Alignment:
Q  463 gaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    |||||||||||| ||||| || ||||||  |||||| ||| ||||||||||||||  |||||||||||||| ||||||||||| ||||||||||||||||    
T  18831637 gaaattttaaatgattaatgattgcaaggttagtttgcaatgattagcgaatacagggaccaatttttaaacgacccctaattgcaaggatgaaatacat 18831736  T
Q  563 atttaag 569  Q
    |||||||    
T  18831737 atttaag 18831743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 438 - 568
Target Start/End: Complemental strand, 43155662 - 43155532
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  |||||||  || ||||||||||| ||||| || |||||| ||||||| ||||||||||||||||||  |||||||||||||| |||    
T  43155662 gcagtgattaagttggtcaaatgactaaattttaaatgattaacgattgcaaggctagtttgcaaggattagcgaatacagggaccaatttttaaacgac 43155563  T
Q  538 ccctaattacaaggatgaaatacatatttaa 568  Q
    || ||||| ||||||| ||||||||||||||    
T  43155562 ccttaattgcaaggatcaaatacatatttaa 43155532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 388 - 562
Target Start/End: Original strand, 51859650 - 51859823
Alignment:
Q  388 tgagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgc 487  Q
    |||||||||||| |||||||||||||||||||||||||||||||||  | | ||| ||||||  | |||||| |||||||||||||| |||||| ||| |    
T  51859650 tgagggtatttt-gtccattcccatgccattttgctaatttgatgacttgggagtgattaagttgatcaaaggacgaaattttaaatgattaaacaatac 51859748  T
Q  488 aagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    |||  ||  || | ||||||||||| ||||||||| ||||||||||| ||  |||||| |||||| |||| ||||    
T  51859749 aaggataaattgccaggattagcgattacaaagactaatttttaaattacgtctaattgcaaggacgaaacacat 51859823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 389 - 562
Target Start/End: Complemental strand, 11524131 - 11523958
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    ||||||||||||||| |||||||||||||||||||||||||||||  | |   | ||||||  |||||||  |||||||||||||| |||||| ||||||    
T  11524131 gagggtatttttgtctattcccatgccattttgctaatttgatgacttggtgatgattaagttggtcaaatgacgaaattttaaatgattaaacaatgca 11524032  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    ||  ||  || | ||||||| ||| |||| |||| |||||||||||||| ||||||| |||||| |||| ||||    
T  11524031 agggtatattgccaggattaacgattacagagactaatttttaaatgacgcctaattgcaaggacgaaacacat 11523958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 452 - 569
Target Start/End: Complemental strand, 15507792 - 15507675
Alignment:
Q  452 ggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaagg 551  Q
    |||||||| ||||||||| |||| | ||| || |||| ||||||||| |||||||||||||||| |  |||||||||||||| ||||| ||||| |||||    
T  15507792 ggtcaaaggacgaaatttgaaatgaataatgattgcacgactagtttgcaaggattagcgaatatagggaccaatttttaaacgacccttaattgcaagg 15507693  T
Q  552 atgaaatacatatttaag 569  Q
    ||||||||||||||||||    
T  15507692 atgaaatacatatttaag 15507675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 389 - 557
Target Start/End: Original strand, 22718183 - 22718351
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||  | || |||||   |||||||  |||||||||||||| |||||| ||||||    
T  22718183 gagggtatttttgtccattcccatgtcattttgctaatttgatgacgtgtcggtgattaaattggtcaaatgacgaaattttaaatgattaaacaatgca 22718282  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaa 557  Q
    ||| ||  || | ||||||| | | |||| |||  |||||||||||||| |||||||| ||||| ||||    
T  22718283 agagtaaattgccaggattaacaattacagagagtaatttttaaatgacgcctaattaaaaggacgaaa 22718351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 452 - 569
Target Start/End: Original strand, 5369176 - 5369293
Alignment:
Q  452 ggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaagg 551  Q
    |||||||| || ||||||||||| ||||| || |||||| ||||||| ||||||||| ||||| ||  |||||||||||||| |||||||| ||| ||||    
T  5369176 ggtcaaaggactaaattttaaatgattaatgattgcaaggctagtttgcaaggattaacgaatgcagggaccaatttttaaacgacccctacttataagg 5369275  T
Q  552 atgaaatacatatttaag 569  Q
    || |||||||||||||||    
T  5369276 atcaaatacatatttaag 5369293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 389 - 490
Target Start/End: Original strand, 9731456 - 9731557
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    |||| ||||||||| |||||||||||||||||||||||||||||| || ||||| ||||||   |||||||||||||||||||||| |||||| ||| ||    
T  9731456 gaggatatttttgttcattcccatgccattttgctaatttgatgacgtggcagtgattaagttagtcaaagaacgaaattttaaatgattaaacaataca 9731555  T
Q  489 ag 490  Q
    ||    
T  9731556 ag 9731557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 452 - 569
Target Start/End: Original strand, 24711389 - 24711506
Alignment:
Q  452 ggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaagg 551  Q
    |||||||  |||||||||||||| ||||| || |||||| ||||||| ||||||||| |||  |||  |||||||||||||| ||||||||||| |||||    
T  24711389 ggtcaaatgacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattaacgatgacatggaccaatttttaaacgacccctaattgcaagg 24711488  T
Q  552 atgaaatacatatttaag 569  Q
    || |||||||||||||||    
T  24711489 atcaaatacatatttaag 24711506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 389 - 490
Target Start/End: Complemental strand, 27891766 - 27891665
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    |||| |||||||||||||||||||| ||||||||||||||||||| ||  |||| ||||||  |||||||| |||||||||||||| |||||| ||||||    
T  27891766 gaggatatttttgtccattcccatgtcattttgctaatttgatgacgtgacagtgattaagttggtcaaaggacgaaattttaaatgattaaacaatgca 27891667  T
Q  489 ag 490  Q
    ||    
T  27891666 ag 27891665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 388 - 565
Target Start/End: Original strand, 32063581 - 32063758
Alignment:
Q  388 tgagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgc 487  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| || ||| | |||||| | ||  | | ||| |||||||||| ||||||   |||    
T  32063581 tgagggtatttttgtccattctcatgccattttgctaatttgatgacgtggcaataattaagtgcgtgcagggacggaattttaaatgattaaactttgc 32063680  T
Q  488 aagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatt 565  Q
    |||  || ||| | || |||| ||| |||| | ||||||||||||||||||||||||| || |||  |||||||||||    
T  32063681 aagggtaatttgccagtattaacgattacagaaaccaatttttaaatgacccctaattgcagggacaaaatacatatt 32063758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 389 - 562
Target Start/End: Original strand, 39701153 - 39701326
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    |||||||||||||||||||||||| | ||||||||||||||||||  | ||||| ||||||  |||||||  |||||||||||||| |||||| ||||||    
T  39701153 gagggtatttttgtccattcccatactattttgctaatttgatgacttggcagtgattaagttggtcaaatgacgaaattttaaatgattaaacaatgca 39701252  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    |   ||  ||   | ||||| ||| |||| |||| |||||||||||||| ||||||| |||||| |||| ||||    
T  39701253 aaggtaaattgtcaagattaacgattacatagactaatttttaaatgacgcctaattgcaaggacgaaacacat 39701326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 389 - 562
Target Start/End: Original strand, 52573472 - 52573645
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    |||||||||||||||||||| |||||||| ||||||||||||||| || ||||| |||||   | |||||| ||| |||||||||| |||||| ||||||    
T  52573472 gagggtatttttgtccattctcatgccatattgctaatttgatgacgtggcagtgattaaattgatcaaaggacggaattttaaatgattaaacaatgca 52573571  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    |   ||  || | |||||||| || ||||  ||| |||||||||||||| ||||||| |||||| |||| ||||    
T  52573572 atggtaaattgctaggattagtgattacatggactaatttttaaatgacgcctaattgcaaggacgaaacacat 52573645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 461 - 569
Target Start/End: Complemental strand, 13058147 - 13058039
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| |||||| |  ||  |||| ||||||||||| |||| ||||||||||||||| ||||||||||| ||||||| ||||||    
T  13058147 acgaaattttaaatgattaaacaatgcaggggtaaattaccaggattagcgattacagagaccaatttttaaacgacccctaattgcaaggatcaaatac 13058048  T
Q  561 atatttaag 569  Q
    |||||||||    
T  13058047 atatttaag 13058039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 389 - 557
Target Start/End: Complemental strand, 22987033 - 22986865
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||| ||  | || |||||   |||||||  |||||||||||||| |||||| ||||||    
T  22987033 gagggtatttttgtctattcccatgtcattttgctaatttgatgacgtgtcggtgattaaattggtcaaatgacgaaattttaaatgattaaacaatgca 22986934  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaa 557  Q
    ||| ||  || | ||||||| | | |||| |||  |||||||||||||| |||||||| ||||| ||||    
T  22986933 agagtaaattgccaggattaacaattacagagagtaatttttaaatgacgcctaattaaaaggacgaaa 22986865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 389 - 557
Target Start/End: Complemental strand, 39701091 - 39700923
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||   ||| ||||||  |||||||| | ||||||||||||||||||| |||| |    
T  39701091 gagggtgtttttgtccattcccatgccattttgctaatttgatgacgtgagagtgattaagttggtcaaaggatgaaattttaaataattaaataatgta 39700992  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaa 557  Q
    ||  ||  ||   ||||||||||| ||||  ||  ||||||||||| || ||||||| |||| ||||||    
T  39700991 agggtatattgtcaggattagcgattacatggattaatttttaaataacgcctaattgcaagaatgaaa 39700923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 438 - 569
Target Start/End: Complemental strand, 53129639 - 53129508
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaa-tttttaaatga 536  Q
    ||||| ||||||  ||||||||||||||||||||||| ||||| || ||||||||||||||  |||||||||| ||||| | |||||| |||||||| ||    
T  53129639 gcagtgattaagttggtcaaagaacgaaattttaaatgattaatgattgcaagactagtttgtaaggattagcaaatac-atgaccaattttttaaacga 53129541  T
Q  537 cccctaattacaaggatgaaatacatatttaag 569  Q
     |||||||| ||| ||| |||||||||||||||    
T  53129540 tccctaattgcaatgataaaatacatatttaag 53129508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 394 - 562
Target Start/End: Original strand, 5818024 - 5818192
Alignment:
Q  394 tatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagact 493  Q
    |||||||||| |||||||||||||||||||||||||| ||  |  |||| ||||||  |||||||| | |||||||||||| |||||| ||||||||  |    
T  5818024 tatttttgtctattcccatgccattttgctaatttgaagacttgacagtgattaagttggtcaaaggatgaaattttaaatgattaaacaatgcaagggt 5818123  T
Q  494 agtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    |  ||   ||||||| ||| ||||  ||| |||||||||||||| ||||||||||| || |||| ||||    
T  5818124 aaattgacaggattaacgattacagggactaatttttaaatgacgcctaattacaaagacgaaacacat 5818192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 461 - 569
Target Start/End: Complemental strand, 14801846 - 14801738
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| ||| ||||  ||  ||   ||||||||||| |||||||||||||||||||| ||| ||||||| ||||||||||||||    
T  14801846 acgaaattttaaatgattaaacaatacaagggtaaattgtcaggattagcgattacaaagaccaatttttaaacgactcctaattgcaaggatgaaatac 14801747  T
Q  561 atatttaag 569  Q
    |||||||||    
T  14801746 atatttaag 14801738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 461 - 569
Target Start/End: Complemental strand, 18831459 - 18831351
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| ||||||||  ||  |||| ||||||||||| ||||  |||||||||||||| |||||||||||  |||||| ||||||    
T  18831459 acgaaattttaaatgattaaacaatgcaagggtaaattaccaggattagcgattacagggaccaatttttaaacgacccctaattgtaaggatcaaatac 18831360  T
Q  561 atatttaag 569  Q
    |||||||||    
T  18831359 atatttaag 18831351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 461 - 569
Target Start/End: Original strand, 35028316 - 35028424
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| ||||||||  ||  || |||||||||||||| | |  ||||||||||||||  |||||||||| ||||||||||||||    
T  35028316 acgaaattttaaatgattaaacaatgcaagggtaaattgcaaggattagcgaacatatggaccaatttttaaaatacccctaattgcaaggatgaaatac 35028415  T
Q  561 atatttaag 569  Q
    |||||||||    
T  35028416 atatttaag 35028424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 389 - 489
Target Start/End: Complemental strand, 39666958 - 39666858
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    |||||||||||||||||||||||||||||||||||||||||||||  | | ||| ||||||  | || ||| |||||||||||||| |||||| ||||||    
T  39666958 gagggtatttttgtccattcccatgccattttgctaatttgatgacttggtagtgattaagttgctcgaaggacgaaattttaaatgattaaacaatgca 39666859  T
Q  489 a 489  Q
    |    
T  39666858 a 39666858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 461 - 569
Target Start/End: Original strand, 50418955 - 50419063
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| ||||||||  ||| || | ||||||||||| || |  |||||||||||||| ||||||||||| ||||||| ||||||    
T  50418955 acgaaattttaaatgattaaacaatgcaagggtagattgccaggattagcgattagagggaccaatttttaaacgacccctaattgcaaggatcaaatac 50419054  T
Q  561 atatttaag 569  Q
    |||||||||    
T  50419055 atatttaag 50419063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 390 - 562
Target Start/End: Original strand, 50751745 - 50751916
Alignment:
Q  390 agggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaa 489  Q
    |||| |||||||||||||||||||| |||||| |||||||||||||| |||||| ||||| ||||  | | ||||| |||||||| |||||| |||||||    
T  50751745 agggcatttttgtccattcccatgctattttgttaatttgatgatgtggcagtctttaagtgggttcagggacgaatttttaaatgattaaacaatgcaa 50751844  T
Q  490 gactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    |  || |||   ||||||||||| ||| | ||| |||||||||| ||| ||||||| || || ||||| ||||    
T  50751845 ggttaatttgtcaggattagcgattac-aggacgaatttttaaacgacgcctaattgcaggggtgaaacacat 50751916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 475 - 569
Target Start/End: Original strand, 24411680 - 24411774
Alignment:
Q  475 aattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    |||||| || ||||||  |||||| ||||||||||||||||||  || ||||||||||| ||||| ||||| |||||||||||||||||||||||    
T  24411680 aattaatgattgcaaggttagtttgcaaggattagcgaatacagggatcaatttttaaacgacccttaattgcaaggatgaaatacatatttaag 24411774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 500 - 569
Target Start/End: Complemental strand, 1178127 - 1178059
Alignment:
Q  500 caaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    ||||||||||||||||||  |||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  1178127 caaggattagcgaatacat-gaccaatttttaaacgacctctaattacaaggatgaaatacatatttaag 1178059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 501 - 570
Target Start/End: Original strand, 16006151 - 16006220
Alignment:
Q  501 aaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaagt 570  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||| |||| || ||||||||||||||||    
T  16006151 aaggattagcgaatacagagaccaatttttaaacgacccctaattgcaagaatcaaatacatatttaagt 16006220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 461 - 570
Target Start/End: Original strand, 17356240 - 17356349
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| || ||| ||||||||| ||  || | | ||||||||||||||  |||||||||||||| ||||| |||||  |||||||||||||    
T  17356240 acgaaattttaaatgatcaaacaatgcaagagtaaattgccaagattagcgaatacagggaccaatttttaaacgacccgtaattggaaggatgaaatac 17356339  T
Q  561 atatttaagt 570  Q
    ||||||||||    
T  17356340 atatttaagt 17356349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 461 - 570
Target Start/End: Complemental strand, 37248346 - 37248237
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| ||||||||  ||  || | ||||||||||| ||||  |||||||||||||| ||||||||||| ||||| | ||||||    
T  37248346 acgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcgattacagggaccaatttttaaacgacccctaattgcaaggttcaaatac 37248247  T
Q  561 atatttaagt 570  Q
    ||||||||||    
T  37248246 atatttaagt 37248237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 451 - 540
Target Start/End: Complemental strand, 54713749 - 54713660
Alignment:
Q  451 gggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccc 540  Q
    ||||||||| |||||||||||||| ||||| || |||||| ||||||| |||||||||||||||||| |||  |||||||||| ||||||    
T  54713749 gggtcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacagagattaatttttaaacgacccc 54713660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 461 - 569
Target Start/End: Complemental strand, 24711221 - 24711113
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| |||||||   ||  || | ||||||||||| ||||  |||||||||||||| ||||||||||| ||||||| ||||||    
T  24711221 acgaaattttaaatgattaaacaatgcaacggtaaattgccaggattagcgattacagggaccaatttttaaacgacccctaattgcaaggatcaaatac 24711122  T
Q  561 atatttaag 569  Q
    |||||||||    
T  24711121 atatttaag 24711113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 438 - 565
Target Start/End: Original strand, 30642441 - 30642568
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    |||||||||||| ||||||| | |||||||||||||| ||||||   |||||||||| ||| | ||||||| ||| ||||| ||  ||||||||||||||    
T  30642441 gcagtcattaagtgggtcaagggacgaaattttaaatgattaaactttgcaagactaatttgctaggattaacgattacaatgatgaatttttaaatgac 30642540  T
Q  538 ccctaattacaaggatgaaatacatatt 565  Q
    || ||||| || ||| |||| |||||||    
T  30642541 ccataattgcagggacgaaacacatatt 30642568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 389 - 533
Target Start/End: Complemental strand, 39538262 - 39538121
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    |||||||||||||| || |  |||| ||||||||||||||||||| ||  |||  |||||   | | || | |||||||||||||| |||||||||||||    
T  39538262 gagggtatttttgttcaattacatgtcattttgctaatttgatgacgtgacagcgattaattagattaagggacgaaattttaaatgattaaagaatgca 39538163  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaa 533  Q
    |||||| ||| |||| ||||||||||||   ||||||||||||||    
T  39538162 agactaattttcaagaattagcgaatac---gaccaatttttaaa 39538121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 464 - 569
Target Start/End: Complemental strand, 5369054 - 5368949
Alignment:
Q  464 aaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacata 563  Q
    ||||||||||| |||||| |||||| |  ||  || | ||||||||||| ||||| |||||||||||||| || |||||||| ||||||| |||||||||    
T  5369054 aaattttaaatgattaaacaatgcaggggtaaattgccaggattagcgattacaaggaccaatttttaaacgatccctaattgcaaggatcaaatacata 5368955  T
Q  564 tttaag 569  Q
    ||||||    
T  5368954 tttaag 5368949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 388 - 449
Target Start/End: Original strand, 40316908 - 40316969
Alignment:
Q  388 tgagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaag 449  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| | ||| ||||||    
T  40316908 tgagggtatttttgtccattcccatgtcattttgctaatttgatgatgtggtagtaattaag 40316969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 388 - 449
Target Start/End: Original strand, 40326982 - 40327043
Alignment:
Q  388 tgagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaag 449  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| | ||| ||||||    
T  40326982 tgagggtatttttgtccattcccatgtcattttgctaatttgatgatgtggtagtaattaag 40327043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 500 - 569
Target Start/End: Complemental strand, 48528556 - 48528487
Alignment:
Q  500 caaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    ||||||||  |||||||| ||||||||||||||| ||||||||||| ||||||| |||||||||||||||    
T  48528556 caaggattgacgaatacagagaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaag 48528487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 461 - 570
Target Start/End: Original strand, 54087013 - 54087122
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| ||||||||  ||  ||   | ||||| ||| ||||  |||||||||||||| ||||||||||||||| ||||||||||    
T  54087013 acgaaattttaaatgattaaacaatgcaagggtaaattgtcatgattaacgattacagggaccaatttttaaacgacccctaattacaatgatgaaatac 54087112  T
Q  561 atatttaagt 570  Q
    ||||||||||    
T  54087113 atatttaagt 54087122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 461 - 569
Target Start/End: Complemental strand, 7451944 - 7451836
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| |||||| |  ||  || | ||||||| ||| ||||  |||||||||||||| ||||||||||| ||||||| ||||||    
T  7451944 acgaaattttaaatgattaaacaatgcaggggtaaattgccaggattaacgattacagggaccaatttttaaacgacccctaattgcaaggatcaaatac 7451845  T
Q  561 atatttaag 569  Q
    |||||||||    
T  7451844 atatttaag 7451836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 502 - 570
Target Start/End: Original strand, 15508032 - 15508099
Alignment:
Q  502 aggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaagt 570  Q
    ||||||||||| ||||| ||| |||||||||| ||||||||||| ||||||||||||||||||||||||    
T  15508032 aggattagcgattacaaggac-aatttttaaacgacccctaattgcaaggatgaaatacatatttaagt 15508099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 461 - 569
Target Start/End: Complemental strand, 23613419 - 23613311
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| |||||| |  ||  || | | ||||||||| ||||  |||||||||||||| ||||||||||| ||||||| ||||||    
T  23613419 acgaaattttaaatgattaaacaatgcaggggtaaattgccaagattagcgattacatggaccaatttttaaacgacccctaattgcaaggatcaaatac 23613320  T
Q  561 atatttaag 569  Q
    |||||||||    
T  23613319 atatttaag 23613311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 461 - 569
Target Start/End: Original strand, 34765698 - 34765806
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| |||||||   ||  || | ||||||||||| ||||   ||||||||||||| ||||||||||| ||||||| ||||||    
T  34765698 acgaaattttaaatgattaaacaatgcaaaggtaaattgccaggattagcgattacatgaaccaatttttaaacgacccctaattgcaaggataaaatac 34765797  T
Q  561 atatttaag 569  Q
    |||||||||    
T  34765798 atatttaag 34765806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 461 - 569
Target Start/End: Original strand, 43155814 - 43155922
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| |||||| |  ||  || | ||||||| ||| ||||  |||||||||||||| |||||||||||| |||||| ||||||    
T  43155814 acgaaattttaaatgattaaataatgcagggataaattgccaggattaacgattacagggaccaatttttaaacgacccctaattataaggatcaaatac 43155913  T
Q  561 atatttaag 569  Q
    |||||||||    
T  43155914 atatttaag 43155922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 461 - 569
Target Start/End: Original strand, 44967356 - 44967464
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| |||||| |  ||  || | ||||||||||| ||||  |||||||||||||| |||| |||||| ||||||| ||||||    
T  44967356 acgaaattttaaatgattaaacaatgcaggggtaaattgccaggattagcgattacagggaccaatttttaaacgacctctaattgcaaggatcaaatac 44967455  T
Q  561 atatttaag 569  Q
    |||||||||    
T  44967456 atatttaag 44967464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 461 - 569
Target Start/End: Complemental strand, 51692663 - 51692555
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||| | |||||| ||||||||  ||  ||   ||||||||||| |||| ||| ||||||||||| |||| |||||| ||||||||||||||    
T  51692663 acgaaattttaagtgattaaacaatgcaagggtaaattgtcaggattagcgattacatagatcaatttttaaacgacctctaattgcaaggatgaaatac 51692564  T
Q  561 atatttaag 569  Q
    |||||||||    
T  51692563 atatttaag 51692555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 461 - 569
Target Start/End: Complemental strand, 52909363 - 52909255
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| ||||||||  ||  ||   ||||||||||| ||||  ||||||||||| || ||||||||||| ||| ||||||||||    
T  52909363 acgaaattttaaatgattaaacaatgcaagggtaaattgtcaggattagcgattacagtgaccaatttttgaacgacccctaattgcaaagatgaaatac 52909264  T
Q  561 atatttaag 569  Q
    |||||||||    
T  52909263 atatttaag 52909255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 463 - 570
Target Start/End: Complemental strand, 53701920 - 53701813
Alignment:
Q  463 gaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    |||||||||||| |||||| ||||||||  ||  ||   |||||||| || |||| ||| ||||||||||| ||||||||||| ||||||||||||| ||    
T  53701920 gaaattttaaatgattaaacaatgcaaggataaattgtcaggattagagattacagagatcaatttttaaacgacccctaattgcaaggatgaaatagat 53701821  T
Q  563 atttaagt 570  Q
    ||||||||    
T  53701820 atttaagt 53701813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 391 - 453
Target Start/End: Original strand, 23455609 - 23455671
Alignment:
Q  391 gggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcggg 453  Q
    ||||||||||||||||||||||| ||||||||||||||||||| || ||||| ||||| ||||    
T  23455609 gggtatttttgtccattcccatgtcattttgctaatttgatgacgtggcagtgattaatcggg 23455671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 388 - 545
Target Start/End: Complemental strand, 30641700 - 30641546
Alignment:
Q  388 tgagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgc 487  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||| ||  |||| ||||||  |||  | | |||||||||||||| ||||||   ||     
T  30641700 tgagggtaattttgtccattcccatgacattttgctaatttgatgacgtgacagtaattaag-tggtgtagggacgaaattttaaatgattaaactttgt 30641602  T
Q  488 aagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaatt 545  Q
    ||   || ||| ||||||||| ||| |||  |||| ||||||||||||||||||||||    
T  30641601 aatggtaatttgcaaggattaacgattac--agacaaatttttaaatgacccctaatt 30641546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 389 - 562
Target Start/End: Complemental strand, 22718121 - 22717948
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    ||||||||||||||| ||||  || ||||||||||||||||||||  | |  || ||||||  |||||||| |||||||||||||| |||||| || |||    
T  22718121 gagggtatttttgtctattcttataccattttgctaatttgatgacttggtggtgattaagttggtcaaaggacgaaattttaaatgattaaacaaagca 22718022  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    ||  ||  ||   ||||||||||| ||||  ||| ||||||||||||||  ||||||  ||||| |||| ||||    
T  22718021 agggtatattgtcaggattagcgattacatggactaatttttaaatgacgtctaattgtaaggacgaaacacat 22717948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 389 - 562
Target Start/End: Original strand, 22987095 - 22987268
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    ||||||||||||||| ||||  || ||||||||||||||||||||  | |  || ||||||  |||||||| |||||||||||||| |||||| || |||    
T  22987095 gagggtatttttgtctattcttataccattttgctaatttgatgacttggtggtgattaagttggtcaaaggacgaaattttaaatgattaaacaaagca 22987194  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    ||  ||  ||   ||||||||||| ||||  ||| ||||||||||||||  ||||||  ||||| |||| ||||    
T  22987195 agggtatattgtcaggattagcgattacatggactaatttttaaatgacgtctaattgtaaggacgaaacacat 22987268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 461 - 569
Target Start/End: Original strand, 36009131 - 36009240
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccc-taattacaaggatgaaata 559  Q
    |||||||||||||| |||||| |||||| |  ||  || | ||||||| ||| ||||  |||||||||||||| |||||| ||||||||||||| |||||    
T  36009131 acgaaattttaaatgattaaacaatgcaggggtaaatttccaggattaacgattacagggaccaatttttaaacgaccccctaattacaaggatcaaata 36009230  T
Q  560 catatttaag 569  Q
    ||||||||||    
T  36009231 catatttaag 36009240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 390 - 447
Target Start/End: Complemental strand, 52815844 - 52815787
Alignment:
Q  390 agggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcatta 447  Q
    |||||||||||||| ||||||||||||||||||||||||||||| || ||||| ||||    
T  52815844 agggtatttttgtcaattcccatgccattttgctaatttgatgacgtggcagtgatta 52815787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 500 - 569
Target Start/End: Original strand, 53129863 - 53129932
Alignment:
Q  500 caaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    ||||||||||||| ||| | || ||||||||||| ||||||| ||| |||||||||||||||||||||||    
T  53129863 caaggattagcgattacgaggatcaatttttaaacgacccctgattgcaaggatgaaatacatatttaag 53129932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 391 - 447
Target Start/End: Original strand, 38982516 - 38982572
Alignment:
Q  391 gggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcatta 447  Q
    ||||||||||||| ||||||||||||||||||||||||||||| || ||||| ||||    
T  38982516 gggtatttttgtcaattcccatgccattttgctaatttgatgacgtggcagtgatta 38982572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 391 - 447
Target Start/End: Original strand, 52816343 - 52816399
Alignment:
Q  391 gggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcatta 447  Q
    ||||||||||||| ||||||||||||||||||||||||||||| || ||||| ||||    
T  52816343 gggtatttttgtcaattcccatgccattttgctaatttgatgacgtggcagtgatta 52816399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 391 - 447
Target Start/End: Complemental strand, 56556762 - 56556706
Alignment:
Q  391 gggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcatta 447  Q
    ||||||||||||| ||||||||||||||||||||||||||||| || ||||| ||||    
T  56556762 gggtatttttgtcaattcccatgccattttgctaatttgatgacgtggcagtgatta 56556706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #102
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 502 - 565
Target Start/End: Complemental strand, 40387536 - 40387473
Alignment:
Q  502 aggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatt 565  Q
    ||||||||||||||||  |||||||||||||||| ||||||||| || |||||||| |||||||    
T  40387536 aggattagcgaatacagggaccaatttttaaatggcccctaattgcagggatgaaacacatatt 40387473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #103
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 502 - 565
Target Start/End: Original strand, 41583590 - 41583653
Alignment:
Q  502 aggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatt 565  Q
    |||||||||||||||| | | ||||||||||||||||||||||| || |||||||| |||||||    
T  41583590 aggattagcgaatacagaaatcaatttttaaatgacccctaattgcagggatgaaacacatatt 41583653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #104
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 461 - 563
Target Start/End: Original strand, 49879494 - 49879596
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| ||||||||  ||  ||   ||||||||||| |||| ||| || |||||||| ||||||||||| ||||||| ||||||    
T  49879494 acgaaattttaaatgattaaacaatgcaagggtaaattgtcaggattagcgattacagagatcagtttttaaacgacccctaattgcaaggatcaaatac 49879593  T
Q  561 ata 563  Q
    |||    
T  49879594 ata 49879596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #105
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 500 - 569
Target Start/End: Complemental strand, 55866180 - 55866113
Alignment:
Q  500 caaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    |||||||||| |||||||||  |||||||||||| ||||||||||| || ||| ||||||||||||||||    
T  55866180 caaggattagtgaatacaaa--ccaatttttaaacgacccctaattgcagggacgaaatacatatttaag 55866113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #106
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 444 - 545
Target Start/End: Complemental strand, 8438407 - 8438307
Alignment:
Q  444 attaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaa 543  Q
    |||||| ||||||| | |||||||||||||| ||||| |  ||||||| || ||| | ||||||| ||| ||||  ||||||||||||||||||||||||    
T  8438407 attaagtgggtcaagggacgaaattttaaatgattaaggtttgcaagagtaatttgccaggattaacgattacat-gaccaatttttaaatgacccctaa 8438309  T
Q  544 tt 545  Q
    ||    
T  8438308 tt 8438307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #107
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 506 - 570
Target Start/End: Complemental strand, 24411423 - 24411359
Alignment:
Q  506 ttagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaagt 570  Q
    ||||||| ||||  ||||||||||||||  |||||||||| | ||||||||||||||||||||||    
T  24411423 ttagcgattacagggaccaatttttaaactacccctaattgctaggatgaaatacatatttaagt 24411359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #108
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 461 - 569
Target Start/End: Original strand, 54435415 - 54435523
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||||||||   |||||||  ||| ||| ||||||||  ||| ||||  || ||||||||||| ||| ||||||| |||| | |||||||    
T  54435415 acgaaattttaaataattatcaaatgcaatgctaatttgcaaggattgacgattacatggatcaatttttaaacgacacctaattgcaagcacgaaatac 54435514  T
Q  561 atatttaag 569  Q
    |||||||||    
T  54435515 atatttaag 54435523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #109
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 391 - 447
Target Start/End: Original strand, 56557245 - 56557301
Alignment:
Q  391 gggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcatta 447  Q
    ||||||||||||| ||||| ||||||||||||||||||||||| || ||||| ||||    
T  56557245 gggtatttttgtcaattcctatgccattttgctaatttgatgacgtggcagtgatta 56557301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #110
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 389 - 428
Target Start/End: Original strand, 11524193 - 11524232
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaattt 428  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  11524193 gaggatatttttgtccattcccatgccattttgctaattt 11524232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #111
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 422 - 557
Target Start/End: Complemental strand, 22923287 - 22923152
Alignment:
Q  422 ctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaaga 521  Q
    |||||||||||| ||  |||| |||||   |||||||  |||||||||||||| |||||| ||||||||| ||  ||   ||||||| ||| |||| |||    
T  22923287 ctaatttgatgacgtgtcagtgattaaattggtcaaatgacgaaattttaaatgattaaacaatgcaagagtaaattgtcaggattaacgattacagaga 22923188  T
Q  522 ccaatttttaaatgacccctaattacaaggatgaaa 557  Q
    | ||||||||||||||  ||||||| ||||| ||||    
T  22923187 ctaatttttaaatgacgtctaattaaaaggacgaaa 22923152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #112
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 422 - 557
Target Start/End: Complemental strand, 22927940 - 22927805
Alignment:
Q  422 ctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaaga 521  Q
    |||||||||||| ||  |||| |||||   |||||||  |||||||||||||| |||||| ||||||||| ||  ||   ||||||| ||| |||| |||    
T  22927940 ctaatttgatgacgtgtcagtgattaaattggtcaaatgacgaaattttaaatgattaaacaatgcaagagtaaattgtcaggattaacgattacagaga 22927841  T
Q  522 ccaatttttaaatgacccctaattacaaggatgaaa 557  Q
    | ||||||||||||||  ||||||| ||||| ||||    
T  22927840 ctaatttttaaatgacgtctaattaaaaggacgaaa 22927805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #113
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 422 - 557
Target Start/End: Complemental strand, 22984219 - 22984084
Alignment:
Q  422 ctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaaga 521  Q
    |||||||||||| ||  |||| |||||   |||||||  |||||||||||||| |||||| ||||||||| ||  ||   ||||||| ||| |||| |||    
T  22984219 ctaatttgatgacgtgtcagtgattaaattggtcaaatgacgaaattttaaatgattaaacaatgcaagagtaaattgtcaggattaacgattacagaga 22984120  T
Q  522 ccaatttttaaatgacccctaattacaaggatgaaa 557  Q
    | ||||||||||||||  ||||||| ||||| ||||    
T  22984119 ctaatttttaaatgacgtctaattaaaaggacgaaa 22984084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #114
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 422 - 557
Target Start/End: Complemental strand, 22997807 - 22997672
Alignment:
Q  422 ctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaaga 521  Q
    |||||||||||| ||  |||| |||||   |||||||  |||||||||||||| |||||| ||||||||| ||  ||   ||||||| ||| |||| |||    
T  22997807 ctaatttgatgacgtgtcagtgattaaattggtcaaatgacgaaattttaaatgattaaacaatgcaagagtaaattgtcaggattaacgattacagaga 22997708  T
Q  522 ccaatttttaaatgacccctaattacaaggatgaaa 557  Q
    | ||||||||||||||  ||||||| ||||| ||||    
T  22997707 ctaatttttaaatgacgtctaattaaaaggacgaaa 22997672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #115
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 423 - 562
Target Start/End: Complemental strand, 50751035 - 50750896
Alignment:
Q  423 taatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagac 522  Q
    ||||||||||| || |||||||||||| ||||  |   ||||| |||||||| |||||| ||||||||  || ||| | ||||||||||| ||||  |||    
T  50751035 taatttgatgacgtggcagtcattaagtgggttcagtgacgaatttttaaatgattaaacaatgcaaggttaatttgccaggattagcgattacagggac 50750936  T
Q  523 caatttttaaatgacccctaattacaaggatgaaatacat 562  Q
     |||||||||| ||| ||||||| || || ||||| ||||    
T  50750935 gaatttttaaacgacgcctaattgcaggggtgaaacacat 50750896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #116
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 461 - 569
Target Start/End: Original strand, 35508558 - 35508666
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| ||||||||  ||  ||   || |||| ||| ||||| ||  |||||||||| ||||||||||| ||| ||| ||||||    
T  35508558 acgaaattttaaatgattaaacaatgcaagggtaaattgttagaattaacgattacaaggattaatttttaaacgacccctaattgcaatgataaaatac 35508657  T
Q  561 atatttaag 569  Q
    |||||||||    
T  35508658 atatttaag 35508666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #117
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 505 - 569
Target Start/End: Original strand, 37976515 - 37976579
Alignment:
Q  505 attagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    |||||||| ||||  || ||||||||||| ||||||||||| | | |||||||||||||||||||    
T  37976515 attagcgattacagggatcaatttttaaacgacccctaattgccatgatgaaatacatatttaag 37976579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #118
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 502 - 552
Target Start/End: Complemental strand, 7280278 - 7280228
Alignment:
Q  502 aggattagcgaatacaaagaccaatttttaaatgacccctaattacaagga 552  Q
    |||||||  ||||||| |||||| ||||||||||||||||| |||||||||    
T  7280278 aggattaaagaatacagagaccattttttaaatgacccctatttacaagga 7280228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #119
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 524 - 566
Target Start/End: Complemental strand, 16005885 - 16005843
Alignment:
Q  524 aatttttaaatgacccctaattacaaggatgaaatacatattt 566  Q
    |||||||||| |||||||||||| |||||| ||||||||||||    
T  16005885 aatttttaaacgacccctaattataaggatcaaatacatattt 16005843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #120
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 452 - 562
Target Start/End: Original strand, 27149303 - 27149412
Alignment:
Q  452 ggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaagg 551  Q
    |||||||| |||||||||||||| |||||| ||||||||  ||  || | ||||||||| | ||||  ||| || ||||||||||| ||||||| |||||    
T  27149303 ggtcaaaggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcaattacagggactaa-ttttaaatgacgcctaattgcaagg 27149401  T
Q  552 atgaaatacat 562  Q
    | |||| ||||    
T  27149402 acgaaacacat 27149412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #121
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 444 - 569
Target Start/End: Original strand, 8439525 - 8439649
Alignment:
Q  444 attaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaa 543  Q
    |||||| ||||||| | |||||||||||||| ||||| |  ||||||  || ||| | ||||||| ||| ||||| || |||||||||||  |||| |||    
T  8439525 attaagtgggtcaagggacgaaattttaaatgattaatgtttgcaaggataatttgctaggattaacgattacaatgatcaatttttaaacaacccttaa 8439624  T
Q  544 ttacaaggatgaaatacatatttaag 569  Q
    |||| |||| |||| ||||| |||||    
T  8439625 ttac-aggacgaaacacatacttaag 8439649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #122
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 394 - 447
Target Start/End: Complemental strand, 38813731 - 38813678
Alignment:
Q  394 tatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcatta 447  Q
    |||||||||| ||||||||| |||||||||||||||| || || ||||| ||||    
T  38813731 tatttttgtcaattcccatgtcattttgctaatttgaagacgtggcagtgatta 38813678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #123
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 520 - 565
Target Start/End: Complemental strand, 41582498 - 41582453
Alignment:
Q  520 gaccaatttttaaatgacccctaattacaaggatgaaatacatatt 565  Q
    |||||||||||||||||||||| ||| || |||||||| |||||||    
T  41582498 gaccaatttttaaatgacccctgattgcagggatgaaacacatatt 41582453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #124
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 520 - 569
Target Start/End: Original strand, 53702175 - 53702224
Alignment:
Q  520 gaccaatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    ||||||||||||||  ||| |||||| ||| |||||||||||||||||||    
T  53702175 gaccaatttttaaacaacctctaattgcaaagatgaaatacatatttaag 53702224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 122; Significance: 3e-62; HSPs: 102)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 388 - 569
Target Start/End: Original strand, 11741762 - 11741943
Alignment:
Q  388 tgagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgc 487  Q
    |||||||||||||||||||||| |||||||||||||||||||||||  |  |||| |||||  ||||||||| |||||||||||||| ||||||||||||    
T  11741762 tgagggtatttttgtccattccaatgccattttgctaatttgatgacctgacagtgattaactgggtcaaaggacgaaattttaaatgattaaagaatgc 11741861  T
Q  488 aagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    ||| ||||||| ||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  11741862 aaggctagtttgcaaagattagcgaatacagagaccgatttttaaatgacccctaattacaaggatgaaatacatatttaag 11741943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 431 - 569
Target Start/End: Complemental strand, 14194563 - 14194425
Alignment:
Q  431 tgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaattttt 530  Q
    |||||| ||||| ||||||  |||||||| |||||||||||||| ||||| || |||||||||||||| ||||||||||||||||||  |||||||||||    
T  14194563 tgatgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaagactagtttgcaaggattagcgaatacagggaccaattttt 14194464  T
Q  531 aaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    ||| ||||||||||| |||||||||||||||||||||||    
T  14194463 aaacgacccctaattgcaaggatgaaatacatatttaag 14194425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 438 - 569
Target Start/End: Original strand, 13963124 - 13963255
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  ||||||||||||||||||||||| ||||| || |||||||||||||| ||||||||| |||||||| ||||||||||||||| |||    
T  13963124 gcagtgattaagttggtcaaagaacgaaattttaaatgattaatgattgcaagactagtttgcaaggattaacgaatacatagaccaatttttaaacgac 13963223  T
Q  538 ccctaattacaaggatgaaatacatatttaag 569  Q
    || ||||||||||||||||||| |||||||||    
T  13963224 ccataattacaaggatgaaatatatatttaag 13963255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 438 - 569
Target Start/End: Complemental strand, 16156988 - 16156857
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  |||||||| |||||||||||||| ||||| || |||||||||||||| ||||||||| |||||||| ||||||||||||||| |||    
T  16156988 gcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaagactagtttgcaaggattaacgaatacatagaccaatttttaaacgac 16156889  T
Q  538 ccctaattacaaggatgaaatacatatttaag 569  Q
    |||||||| |||| ||||||||||||||||||    
T  16156888 ccctaattgcaagtatgaaatacatatttaag 16156857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 438 - 569
Target Start/End: Original strand, 39453594 - 39453725
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  |||||||| |||||||||||||| ||||| || |||||| ||||||| ||| ||||||||||||||  ||||||||||||||||||    
T  39453594 gcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaagattagcgaatacagggaccaatttttaaatgac 39453693  T
Q  538 ccctaattacaaggatgaaatacatatttaag 569  Q
    |||||||| |||||||||||||||||||||||    
T  39453694 ccctaattgcaaggatgaaatacatatttaag 39453725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 435 - 569
Target Start/End: Original strand, 27587407 - 27587541
Alignment:
Q  435 gtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaat 534  Q
    |||||||| ||||||  |||||||| || ||||||||||| ||||| || |||||| ||||||| ||||||||||||||||||| ||||||||||||||     
T  27587407 gtagcagtgattaagttggtcaaaggactaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacaaggaccaatttttaaac 27587506  T
Q  535 gacccctaattacaaggatgaaatacatatttaag 569  Q
    ||||||||||| ||||||| |||||||||||||||    
T  27587507 gacccctaattgcaaggatcaaatacatatttaag 27587541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 438 - 568
Target Start/End: Original strand, 43159109 - 43159239
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  |||||||| |||||||||||||| ||||| || |||||| |||||||  |||||||||||||||||| |||||||||||||| |||    
T  43159109 gcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgtaaggattagcgaatacaacgaccaatttttaaacgac 43159208  T
Q  538 ccctaattacaaggatgaaatacatatttaa 568  Q
    |||||||| ||||||||||||||||||||||    
T  43159209 ccctaattgcaaggatgaaatacatatttaa 43159239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 439 - 568
Target Start/End: Complemental strand, 11740819 - 11740690
Alignment:
Q  439 cagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacc 538  Q
    ||||||||||  ||||||||| || ||||||||||| ||||||||||||||| ||||||| |||||||||||||||| |  || ||||||||||| ||||    
T  11740819 cagtcattaactgggtcaaaggacaaaattttaaatgattaaagaatgcaaggctagtttgcaaggattagcgaatatatggatcaatttttaaacgacc 11740720  T
Q  539 cctaattacaaggatgaaatacatatttaa 568  Q
    ||||||| ||||||||||||||||||||||    
T  11740719 cctaattgcaaggatgaaatacatatttaa 11740690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 438 - 569
Target Start/End: Original strand, 17202694 - 17202825
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  |||||||  |||||||||||||| ||||| || |||||||||||||| ||||||||||||||||||  |||| ||||||||| |||    
T  17202694 gcagtgattaagttggtcaaatgacgaaattttaaatgattaatgattgcaagactagtttgcaaggattagcgaatacagggaccgatttttaaacgac 17202793  T
Q  538 ccctaattacaaggatgaaatacatatttaag 569  Q
    |||||||| |||||||||||||||||||||||    
T  17202794 ccctaattgcaaggatgaaatacatatttaag 17202825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 389 - 562
Target Start/End: Original strand, 20153162 - 20153332
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||  |||||||| | |||||||||||| |||||| ||||||    
T  20153162 gagggtatttttgtccattcccatgtcattttgctaatttgatgacgtagcagtgattaagttggtcaaaggatgaaattttaaatgattaaacaatgca 20153261  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    ||  ||  || |   ||||||||| ||||| ||| |||||||||||||| ||||||| |||||| |||| ||||    
T  20153262 agggtaaattgc---gattagcgattacaaggactaatttttaaatgacacctaattgcaaggacgaaacacat 20153332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 390 - 568
Target Start/End: Original strand, 21257408 - 21257586
Alignment:
Q  390 agggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggt-caaagaacgaaattttaaataattaaagaatgca 488  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||| | ||| |||||  |||| |  ||| |||| |||||||| ||||| ||  |||    
T  21257408 agggcatttttgtccattctcatgccattttgctaatttgatgatgtggtagtaattaactgggttccgaga-cgaatttttaaatgattaatgatcgca 21257506  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaa 568  Q
    || ||||||| ||||||||||||||||||  | |||||||||||| ||||||||||| || |||||||||||||||||||    
T  21257507 aggctagtttgcaaggattagcgaatacagtgtccaatttttaaacgacccctaattgcagggatgaaatacatatttaa 21257586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 465 - 569
Target Start/End: Complemental strand, 42265841 - 42265737
Alignment:
Q  465 aattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatat 564  Q
    |||||||||| ||||||||||||||| ||||||| ||||||||||||||||||  |||||||||||||| ||||||||||| || |||||||||||||||    
T  42265841 aattttaaatcattaaagaatgcaaggctagtttgcaaggattagcgaatacagggaccaatttttaaacgacccctaattgcagggatgaaatacatat 42265742  T
Q  565 ttaag 569  Q
    |||||    
T  42265741 ttaag 42265737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 438 - 569
Target Start/End: Original strand, 11762012 - 11762143
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  |||||||| || ||||||||||| ||||| || |||||| ||||||| ||||||||||||||||||  |||||||||||||| |||    
T  11762012 gcagtgattaagttggtcaaaggactaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacagggaccaatttttaaacgac 11762111  T
Q  538 ccctaattacaaggatgaaatacatatttaag 569  Q
    |||||||| ||||||| |||||||||||||||    
T  11762112 ccctaattgcaaggatcaaatacatatttaag 11762143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 438 - 569
Target Start/End: Complemental strand, 28269555 - 28269424
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  |||||||| |||||||||||||| ||||| || |||||| ||||||| |||||||||||||||||   |||||||||||||| |||    
T  28269555 gcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatactgggaccaatttttaaacgac 28269456  T
Q  538 ccctaattacaaggatgaaatacatatttaag 569  Q
    |||||||| ||| |||||||||||||||||||    
T  28269455 ccctaattgcaatgatgaaatacatatttaag 28269424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 452 - 569
Target Start/End: Original strand, 6301852 - 6301967
Alignment:
Q  452 ggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaagg 551  Q
    |||||||| |||||||||||||| ||||| || |||||||||||||| ||||||||| ||||||||| |||||||||||||| ||||||||||| |||      
T  6301852 ggtcaaaggacgaaattttaaatgattaatgattgcaagactagtttgcaaggattaacgaatacaaggaccaatttttaaacgacccctaattgcaa-- 6301949  T
Q  552 atgaaatacatatttaag 569  Q
    ||||||||||||||||||    
T  6301950 atgaaatacatatttaag 6301967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 461 - 570
Target Start/End: Original strand, 35512432 - 35512541
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| ||||| || |||||| ||||||| |||||||| |||||||||  |||||||||||||| ||||||||||| ||||||||||||||    
T  35512432 acgaaattttaaatgattaatgattgcaaggctagtttgcaaggattggcgaatacagggaccaatttttaaacgacccctaattgcaaggatgaaatac 35512531  T
Q  561 atatttaagt 570  Q
    ||||||||||    
T  35512532 atatttaagt 35512541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 438 - 566
Target Start/End: Original strand, 8322699 - 8322827
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  |||||||| |||||||||||||| ||||| || |||||| ||||||| ||||||||| |||||||   |||||||||||||| |||    
T  8322699 gcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattaacgaatacggggaccaatttttaaacgac 8322798  T
Q  538 ccctaattacaaggatgaaatacatattt 566  Q
    |||||||| ||||||||||||||||||||    
T  8322799 ccctaattgcaaggatgaaatacatattt 8322827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 454 - 570
Target Start/End: Complemental strand, 19892425 - 19892309
Alignment:
Q  454 tcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggat 553  Q
    |||||| |||||||||||||| ||||| || | |||| ||||||| ||||||||| ||||||||  |||||||||||||| ||||||||||| |||||||    
T  19892425 tcaaaggacgaaattttaaatgattaatgattacaaggctagtttgcaaggattaacgaatacatggaccaatttttaaacgacccctaattgcaaggat 19892326  T
Q  554 gaaatacatatttaagt 570  Q
    |||||||||||||||||    
T  19892325 gaaatacatatttaagt 19892309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 438 - 569
Target Start/End: Complemental strand, 3529006 - 3528875
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  |||||||| || ||||||||||| ||||| || |||||| ||||||| ||||||||||| ||||||  |||||||||||||| |||    
T  3529006 gcagtgattaagttggtcaaaggactaaattttaaatgattaacgattgcaaggctagtttgcaaggattagcaaatacagggaccaatttttaaacgac 3528907  T
Q  538 ccctaattacaaggatgaaatacatatttaag 569  Q
    |||||||| ||||||| |||||||||||||||    
T  3528906 ccctaattgcaaggatcaaatacatatttaag 3528875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 438 - 569
Target Start/End: Original strand, 6150715 - 6150846
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  |||||||| |||||||||||||| ||||| || |||||| ||||||| ||| ||||| ||||||||  ||| |||||||||| |||    
T  6150715 gcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaagattaacgaatacatggactaatttttaaacgac 6150814  T
Q  538 ccctaattacaaggatgaaatacatatttaag 569  Q
    |||||||| |||||||||||||||||||||||    
T  6150815 ccctaattgcaaggatgaaatacatatttaag 6150846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 438 - 569
Target Start/End: Original strand, 16083238 - 16083369
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  ||||||| ||||||||||||||| ||||| || |||||||||||||| |||||||||||||||| |   ||||||||||||| ||     
T  16083238 gcagtgattaagttggtcaaataacgaaattttaaatgattaatgattgcaagactagtttgcaaggattagcgaatatatgaaccaatttttaaacgat 16083337  T
Q  538 ccctaattacaaggatgaaatacatatttaag 569  Q
    || ||||| |||||||||||||||||||||||    
T  16083338 ccttaattgcaaggatgaaatacatatttaag 16083369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 438 - 569
Target Start/End: Complemental strand, 20814268 - 20814138
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  ||| |||| |||||||||||||| ||||| || ||||| |||||||| ||||||||||||||||| |||||||||||||||| |||    
T  20814268 gcagtgattaagttggttaaaggacgaaattttaaatgattaatgattgcaatactagtttgcaaggattagcgaatac-aagaccaatttttaaacgac 20814170  T
Q  538 ccctaattacaaggatgaaatacatatttaag 569  Q
    | ||||||  ||||||||||||||||||||||    
T  20814169 ctctaattgtaaggatgaaatacatatttaag 20814138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 438 - 569
Target Start/End: Complemental strand, 29646495 - 29646364
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  |||||||| |  ||||||||||| ||||| || || ||| ||||||| ||||||||||||||||||  |||||||||||||| |||    
T  29646495 gcagtgattaagttggtcaaaggataaaattttaaatgattaatgattggaaggctagtttgcaaggattagcgaatacatggaccaatttttaaaagac 29646396  T
Q  538 ccctaattacaaggatgaaatacatatttaag 569  Q
    |||||||||||||||| |||||||||||||||    
T  29646395 ccctaattacaaggataaaatacatatttaag 29646364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 452 - 569
Target Start/End: Complemental strand, 6301662 - 6301548
Alignment:
Q  452 ggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaagg 551  Q
    |||||||| |||||||||||||||||||| || |||||||||||||| ||||||||||||||||||| |||||||||||||| || || ||||| |||      
T  6301662 ggtcaaaggacgaaattttaaataattaatgattgcaagactagtttgcaaggattagcgaatacaaggaccaatttttaaacga-ccataattgcaa-- 6301566  T
Q  552 atgaaatacatatttaag 569  Q
    ||||||||||||||||||    
T  6301565 atgaaatacatatttaag 6301548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 438 - 568
Target Start/End: Original strand, 11047732 - 11047861
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  |||||||| |||||||||||||| ||||| || |||||| ||||||| |||||||||| |||||| | |||||||||||||| |||    
T  11047732 gcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagtgaatac-atgaccaatttttaaacgac 11047830  T
Q  538 ccctaattacaaggatgaaatacatatttaa 568  Q
    ||||| || ||||||||||||||||||||||    
T  11047831 ccctacttgcaaggatgaaatacatatttaa 11047861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 471 - 569
Target Start/End: Original strand, 18247404 - 18247502
Alignment:
Q  471 aaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    |||| ||||| || |||||||||||||| |||||||||||||||||| ||||||| ||||||| ||||||||||| |||||||||||||||||||||||    
T  18247404 aaatgattaatgattgcaagactagtttgcaaggattagcgaatacagagaccaaattttaaacgacccctaattgcaaggatgaaatacatatttaag 18247502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 439 - 569
Target Start/End: Original strand, 38442363 - 38442493
Alignment:
Q  439 cagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacc 538  Q
    |||| ||||||  |||||||| ||||||||||||||  |||| || |||||| ||||||| ||||||||| |||||||||  ||| ||||||||| ||||    
T  38442363 cagtgattaagttggtcaaaggacgaaattttaaatggttaatgattgcaaggctagtttgcaaggattaacgaatacaagaacccatttttaaacgacc 38442462  T
Q  539 cctaattacaaggatgaaatacatatttaag 569  Q
    ||||||| |||||||||||||||||||||||    
T  38442463 cctaattgcaaggatgaaatacatatttaag 38442493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 452 - 569
Target Start/End: Original strand, 186728 - 186845
Alignment:
Q  452 ggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaagg 551  Q
    |||||||| |||||||||||||| ||||| || |||||| ||||||| ||| ||||||| ||||||  |||||||||||||| |||| |||||| |||||    
T  186728 ggtcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaagattagcaaatacagggaccaatttttaaacgacctctaattgcaagg 186827  T
Q  552 atgaaatacatatttaag 569  Q
    ||||||||||||||||||    
T  186828 atgaaatacatatttaag 186845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 389 - 562
Target Start/End: Original strand, 17544292 - 17544465
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |  |||| ||||||  |||||||| || ||||||||||| |||||| ||||||    
T  17544292 gagggtatttttgtccattcccatgccattttgctaatttgatgacttgacagtgattaagttggtcaaaggacaaaattttaaatgattaaacaatgca 17544391  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    ||  ||  || | ||||||| ||| ||||   || |||||||||||||| ||||||| |||||| |||| ||||    
T  17544392 agggtaaattgccaggattaacgattacaggaactaatttttaaatgacgcctaattgcaaggacgaaacacat 17544465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 397 - 562
Target Start/End: Original strand, 33871590 - 33871755
Alignment:
Q  397 ttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagt 496  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||| ||||||  |||||||  |||||||||||||| |||||| ||||||||  ||      
T  33871590 ttttgtccattcccatgtcattttgctaatttgatgacgtagcagtgattaagttggtcaaatgacgaaattttaaatgattaaacaatgcaagggtaaa 33871689  T
Q  497 ttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    || | |||||||  || |||| |||| |||||||||||| | ||||||| |||||| |||| ||||    
T  33871690 ttgccaggattactgattacagagactaatttttaaatggcgcctaattgcaaggacgaaacacat 33871755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 438 - 558
Target Start/End: Original strand, 5994184 - 5994304
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  |||||||| |||||||||||||| ||||| || |||||||||||||| ||||||||||||||||||   ||||||||||||| |||    
T  5994184 gcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaagactagtttgcaaggattagcgaatacatgaaccaatttttaaacgac 5994283  T
Q  538 ccctaattacaaggatgaaat 558  Q
    || ||||| ||||||||||||    
T  5994284 ccttaattgcaaggatgaaat 5994304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 438 - 569
Target Start/End: Complemental strand, 27937186 - 27937057
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  |||||||  |||||||||||||| ||||| || |||||| ||||||| |||||||||||||||| | |||||||  ||||||| ||    
T  27937186 gcagtgattaagttggtcaaatgacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatatagagaccaa--tttaaatcac 27937089  T
Q  538 ccctaattacaaggatgaaatacatatttaag 569  Q
    |||||||| |||||||||||||||||||||||    
T  27937088 ccctaattgcaaggatgaaatacatatttaag 27937057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 438 - 569
Target Start/End: Complemental strand, 5024152 - 5024021
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  |||||||| || ||||||||||| ||||  || |||||| ||||||| ||||||||||||||||||   | ||||||||||| |||    
T  5024152 gcagtgattaagttggtcaaaggacaaaattttaaatgattagtgattgcaaggctagtttgcaaggattagcgaatacatgtatcaatttttaaacgac 5024053  T
Q  538 ccctaattacaaggatgaaatacatatttaag 569  Q
    |||||||| |||||||||||||||||||||||    
T  5024052 ccctaattgcaaggatgaaatacatatttaag 5024021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 438 - 569
Target Start/End: Original strand, 32242537 - 32242667
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  |||||||| || ||||||||||| ||||| || |||||| ||||||| ||||||||||||||||| | ||| ||||||||||  ||    
T  32242537 gcagtgattaagttggtcaaaggacaaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatac-aggactaatttttaaacaac 32242635  T
Q  538 ccctaattacaaggatgaaatacatatttaag 569  Q
    |||||||| |||||||||||||||||||||||    
T  32242636 ccctaattgcaaggatgaaatacatatttaag 32242667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 452 - 569
Target Start/End: Complemental strand, 35920347 - 35920230
Alignment:
Q  452 ggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaagg 551  Q
    |||||||| |||||||||||||| ||||| || |||||| ||| ||| ||||||||||||||||||  |||||||||||||| || ||||||||| || |    
T  35920347 ggtcaaaggacgaaattttaaatgattaatgattgcaaggctaatttgcaaggattagcgaatacattgaccaatttttaaacgatccctaattaaaatg 35920248  T
Q  552 atgaaatacatatttaag 569  Q
    || |||||||||||||||    
T  35920247 atcaaatacatatttaag 35920230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 461 - 570
Target Start/End: Complemental strand, 39453410 - 39453301
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| ||||||||  ||  || | ||||||||||| |||| ||||||||||||||| ||||||||||| ||||||||||||||    
T  39453410 acgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcgattacagagaccaatttttaaacgacccctaattgcaaggatgaaatac 39453311  T
Q  561 atatttaagt 570  Q
    ||||||||||    
T  39453310 atatttaagt 39453301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 402 - 562
Target Start/End: Complemental strand, 8875618 - 8875458
Alignment:
Q  402 tccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttaca 501  Q
    |||||||| |||||||||| |||||||||||| || ||||| ||||||  ||||||||||||||||||||||| |||||| ||||||||  ||  || |     
T  8875618 tccattcctatgccattttactaatttgatgacgtggcagtgattaagttggtcaaagaacgaaattttaaatgattaaacaatgcaagtgtaaattgcc 8875519  T
Q  502 aggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    ||||||| ||| ||||  ||| |||||||||||||| | ||||| |||||| |||| ||||    
T  8875518 aggattaacgattacagggactaatttttaaatgacgcttaattgcaaggacgaaacacat 8875458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 438 - 569
Target Start/End: Original strand, 19517902 - 19518033
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  |||||||  || ||||||||||| ||||| || |||||| ||||||| ||| ||||||||||||||  ||| ||||||||||  ||    
T  19517902 gcagtgattaagttggtcaaaagacaaaattttaaatgattaatgattgcaaggctagtttgcaaagattagcgaatacatggactaatttttaaactac 19518001  T
Q  538 ccctaattacaaggatgaaatacatatttaag 569  Q
    |||||||| |||||||||||||||||||||||    
T  19518002 ccctaattgcaaggatgaaatacatatttaag 19518033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 438 - 569
Target Start/End: Complemental strand, 28771002 - 28770871
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  |||||||  || ||||||||||| || || || || ||| ||||||| ||||||||||||||||||  |||||||||||||| |||    
T  28771002 gcagtgattaagttggtcaaatgactaaattttaaatgatcaatgattgtaaggctagtttgcaaggattagcgaatacagggaccaatttttaaacgac 28770903  T
Q  538 ccctaattacaaggatgaaatacatatttaag 569  Q
    |||||||| ||||||| |||||||||||||||    
T  28770902 ccctaattgcaaggatcaaatacatatttaag 28770871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 389 - 552
Target Start/End: Complemental strand, 33871521 - 33871358
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||  | || || ||||||  |||||||| |||||||||||||| |||||| ||||||    
T  33871521 gagggtatttttgtccatttccatgccattttgctagtttgatgacttggcggtgattaagttggtcaaaggacgaaattttaaatgattaaacaatgca 33871422  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaagga 552  Q
    ||  ||  || | || |||||||| ||||  ||| |||||||||||||| | ||||| ||||||    
T  33871421 agggtaaattgccagaattagcgattacagggactaatttttaaatgacacttaattgcaagga 33871358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 438 - 569
Target Start/End: Complemental strand, 38475166 - 38475035
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  |||||||  |||||||||||||| ||||| || ||||||  |||||| ||||||||||||||||||  ||||||||||||||||||    
T  38475166 gcagtgattaagttggtcaaatgacgaaattttaaatgattaatgattgcaaggttagtttgcaaggattagcgaatacatggaccaatttttaaatgac 38475067  T
Q  538 ccctaattacaaggatgaaatacatatttaag 569  Q
    |  ||||| | | |||||||||||||||||||    
T  38475066 ctttaattgctatgatgaaatacatatttaag 38475035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 389 - 562
Target Start/End: Complemental strand, 20152962 - 20152790
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    |||||||||||||| ||||||||| |||||| |||||||||||||  | | ||| ||||||  |||||||| |||||||||||||| |||||| ||||||    
T  20152962 gagggtatttttgttcattcccataccattt-gctaatttgatgacttggtagtgattaagttggtcaaaggacgaaattttaaatgattaaacaatgca 20152864  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    ||  ||  || | ||||||||||| |||| |||| |||||||||||||| | ||||| || ||| |||| ||||    
T  20152863 agggtaaatttccaggattagcgattacagagactaatttttaaatgacgcttaattgcatggacgaaacacat 20152790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 466 - 569
Target Start/End: Original strand, 20840760 - 20840863
Alignment:
Q  466 attttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatt 565  Q
    ||||||||| ||||| || |||||||||||||| | ||||||||||| ||||   ||||||||||||| |||||||||||  ||||||||||||||||||    
T  20840760 attttaaatgattaatgattgcaagactagtttgctaggattagcgattacagttaccaatttttaaacgacccctaattgtaaggatgaaatacatatt 20840859  T
Q  566 taag 569  Q
    ||||    
T  20840860 taag 20840863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 438 - 545
Target Start/End: Complemental strand, 21265276 - 21265169
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  |||||||| |||||||||||||||||||| || |||||| ||||||| ||||||||||| ||||||  |||||||||||||| |||    
T  21265276 gcagtgattaagttggtcaaaggacgaaattttaaataattaatgattgcaaggctagtttgcaaggattagcaaatacatggaccaatttttaaacgac 21265177  T
Q  538 ccctaatt 545  Q
    | ||||||    
T  21265176 ctctaatt 21265169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 389 - 491
Target Start/End: Complemental strand, 17544230 - 17544128
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |  |||| ||||||  |||||||  || ||||||||||| |||||| ||||||    
T  17544230 gagggtatttttgtccattcccatgccattttgctaatttgatgacttgacagtgattaagttggtcaaatgacaaaattttaaatgattaaacaatgca 17544131  T
Q  489 aga 491  Q
    |||    
T  17544130 aga 17544128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 459 - 568
Target Start/End: Original strand, 5024334 - 5024443
Alignment:
Q  459 gaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaat 558  Q
    |||||||||||||||| |||||| |||||||   ||  ||   ||||||||||| ||||| |||||||||||||| ||||||||||| ||||||||||||    
T  5024334 gaacgaaattttaaatgattaaacaatgcaatggtaaattgtcaggattagcgattacaatgaccaatttttaaacgacccctaattgcaaggatgaaat 5024433  T
Q  559 acatatttaa 568  Q
    ||||||||||    
T  5024434 acatatttaa 5024443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 464 - 569
Target Start/End: Original strand, 20814456 - 20814561
Alignment:
Q  464 aaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacata 563  Q
    ||||||||||| |||||| ||||||||  ||  || | ||||||||||| ||||  |||||||||||||| ||||||||||| |||||||||||||||||    
T  20814456 aaattttaaatgattaaacaatgcaagtgtaaattgctaggattagcgattacagtgaccaatttttaaacgacccctaattgcaaggatgaaatacata 20814555  T
Q  564 tttaag 569  Q
    ||||||    
T  20814556 tttaag 20814561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 461 - 569
Target Start/End: Complemental strand, 5993999 - 5993891
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| ||||||||  ||  || | || |||||||| ||||  |||||||||||||| ||||||||||| ||||||||||||||    
T  5993999 acgaaattttaaatgattaaacaatgcaagggtaaattgccagaattagcgattacagggaccaatttttaaacgacccctaattgcaaggatgaaatac 5993900  T
Q  561 atatttaag 569  Q
    |||||||||    
T  5993899 atatttaag 5993891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 461 - 569
Target Start/End: Complemental strand, 6150564 - 6150456
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| ||||||||||||  ||   |||||||| || ||||   ||||||||||||| ||||||||||| ||||||||||||||    
T  6150564 acgaaattttaaatgattaaacaatgcaagactaaattgtcaggattagtgattacatgaaccaatttttaaacgacccctaattgcaaggatgaaatac 6150465  T
Q  561 atatttaag 569  Q
    |||||||||    
T  6150464 atatttaag 6150456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 461 - 569
Target Start/End: Original strand, 24547443 - 24547551
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| ||||||||  ||  || | ||||||||||| || || |||||||||||||| ||||||||||| ||||||| ||||||    
T  24547443 acgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcgattataaggaccaatttttaaacgacccctaattgcaaggatcaaatac 24547542  T
Q  561 atatttaag 569  Q
    |||||||||    
T  24547543 atatttaag 24547551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 461 - 569
Target Start/End: Complemental strand, 37991309 - 37991201
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    ||||||||| |||| ||||| || |||||| ||||||| ||||||||| ||||||||  |||||||||||||| ||||||||||| || ||||||| | |    
T  37991309 acgaaatttgaaatgattaatgattgcaaggctagtttgcaaggattaacgaatacagggaccaatttttaaacgacccctaattgcagggatgaatttc 37991210  T
Q  561 atatttaag 569  Q
    |||||||||    
T  37991209 atatttaag 37991201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 465 - 568
Target Start/End: Original strand, 5835748 - 5835851
Alignment:
Q  465 aattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatat 564  Q
    |||||||||| ||||||   |||||| ||| ||| |||||||||||||||||| | |||||||||||||  || ||||||| ||||||||||||||||||    
T  5835748 aattttaaatgattaaatgttgcaaggctaatttgcaaggattagcgaatacagaaaccaatttttaaacaactcctaattgcaaggatgaaatacatat 5835847  T
Q  565 ttaa 568  Q
    ||||    
T  5835848 ttaa 5835851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 461 - 568
Target Start/End: Complemental strand, 35512258 - 35512151
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| ||||||||  ||  || | ||||||||||| ||||  |||||||||||||| ||||| ||||| ||||||||||||||    
T  35512258 acgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcgattacagggaccaatttttaaacgacccttaattgcaaggatgaaatac 35512159  T
Q  561 atatttaa 568  Q
    ||||||||    
T  35512158 atatttaa 35512151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 461 - 564
Target Start/End: Complemental strand, 38442178 - 38442075
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| ||||||||| ||  ||   ||||||||||| ||||| ||||||||||||||| |||||||||| ||| ||||||||||    
T  38442178 acgaaattttaaatgattaaacaatgcaagagtaaattgtcaggattagcgattacaatgaccaatttttaaataacccctaattgcaacgatgaaatac 38442079  T
Q  561 atat 564  Q
    ||||    
T  38442078 atat 38442075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 392 - 490
Target Start/End: Original strand, 21287904 - 21288002
Alignment:
Q  392 ggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaag 490  Q
    ||||||||||||||||||||||||||||||||||||||||||  | |  || ||||||  |||||||| | |||||||||||| |||||| ||||||||    
T  21287904 ggtatttttgtccattcccatgccattttgctaatttgatgacttggtggtgattaagttggtcaaaggaagaaattttaaatgattaaacaatgcaag 21288002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 461 - 570
Target Start/End: Original strand, 37992606 - 37992715
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||  ||||| || |||||| ||||||| ||| ||||||| |||| | ||| | ||||||||| ||||||||||| || |||||||||||    
T  37992606 acgaaattttaaacgattaatgattgcaaggctagtttgcaaagattagcaaatagagagatcgatttttaaacgacccctaattgcatggatgaaatac 37992705  T
Q  561 atatttaagt 570  Q
    ||||||||||    
T  37992706 atatttaagt 37992715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 461 - 569
Target Start/End: Complemental strand, 11761859 - 11761751
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| |||||| |  ||  || | ||||||||||| ||||  |||||||||||||| ||||||||||| ||||||| ||||||    
T  11761859 acgaaattttaaatgattaaacaatgcaggggtaaattgccaggattagcgattacagggaccaatttttaaacgacccctaattgcaaggatcaaatac 11761760  T
Q  561 atatttaag 569  Q
    |||||||||    
T  11761759 atatttaag 11761751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 464 - 568
Target Start/End: Original strand, 13362549 - 13362653
Alignment:
Q  464 aaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacata 563  Q
    ||||||||||| |||||| ||||||||  ||  || | | ||||||||| ||||| |||||||||||||| ||||||||||| ||| |||||||||||||    
T  13362549 aaattttaaatgattaaacaatgcaagggtaaattgccatgattagcgattacaaggaccaatttttaaacgacccctaattgcaatgatgaaatacata 13362648  T
Q  564 tttaa 568  Q
    |||||    
T  13362649 tttaa 13362653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 461 - 569
Target Start/End: Complemental strand, 13962974 - 13962866
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| ||||||||  ||  |||| ||||||||| | ||||  |||||||||||||| ||||||||||| ||||||| |||||     
T  13962974 acgaaattttaaatgattaaacaatgcaagggtaaattaccaggattagcaattacagggaccaatttttaaacgacccctaattgcaaggataaaatat 13962875  T
Q  561 atatttaag 569  Q
    |||||||||    
T  13962874 atatttaag 13962866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 461 - 569
Target Start/End: Original strand, 19892626 - 19892734
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| ||||||||  ||  ||   ||||||| ||| |||| ||||||||||||||| |||| |||||| ||||||||||||||    
T  19892626 acgaaattttaaatgattaaacaatgcaagggtaaattgttaggattaacgattacagagaccaatttttaaacgacctctaattgcaaggatgaaatac 19892725  T
Q  561 atatttaag 569  Q
    |||||||||    
T  19892726 atatttaag 19892734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 389 - 545
Target Start/End: Complemental strand, 22298724 - 22298568
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||  | | ||| ||||||  |||||||| | |||||||||||| |||||| |||| |    
T  22298724 gagggtatttttgtcaattcccatgtcattttgctaatttgatgacttggtagtgattaagttggtcaaaggatgaaattttaaatgattaaacaatgta 22298625  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaatt 545  Q
    ||  ||  || |   ||||||||| ||||  ||| |||||||||||||| |||||||    
T  22298624 agggtaaattgccccgattagcgattacatggactaatttttaaatgacgcctaatt 22298568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 461 - 568
Target Start/End: Complemental strand, 32242352 - 32242245
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| ||||||||| ||  || | | ||||||| | ||||  || ||||||||||| ||||||||||| ||||||||||||||    
T  32242352 acgaaattttaaatgattaaacaatgcaagagtaaattgccatgattagctattacagggatcaatttttaaacgacccctaattgcaaggatgaaatac 32242253  T
Q  561 atatttaa 568  Q
    ||||||||    
T  32242252 atatttaa 32242245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 388 - 474
Target Start/End: Complemental strand, 22869788 - 22869702
Alignment:
Q  388 tgagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaat 474  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| || ||||| ||||| ||||   | | ||||||||||||||    
T  22869788 tgagggtatttttgtccattctcatgccattttgctaatttgatgacgtggcagtgattaaccgggaagagggacgaaattttaaat 22869702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 439 - 568
Target Start/End: Original strand, 10684234 - 10684362
Alignment:
Q  439 cagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacc 538  Q
    |||| ||||||  |||||||  |||||| ||||||| ||||| || |||||||||||||| |||||||||| ||||||  | | ||||||||||| ||||    
T  10684234 cagtgattaagttggtcaaatgacgaaactttaaatgattaatgattgcaagactagtttgcaaggattagtgaatacgga-atcaatttttaaacgacc 10684332  T
Q  539 cctaattacaaggatgaaatacatatttaa 568  Q
      ||||| ||| ||||||||||||||||||    
T  10684333 tttaattgcaaagatgaaatacatatttaa 10684362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 464 - 569
Target Start/End: Complemental strand, 20840640 - 20840535
Alignment:
Q  464 aaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacata 563  Q
    ||||||||||| |||||| ||||||||  ||  || | ||||||| ||| ||||   ||||||||||||| ||||||||||| |||||||||||||||||    
T  20840640 aaattttaaatcattaaacaatgcaagggtaaattgctaggattaacgattacaggtaccaatttttaaacgacccctaattgcaaggatgaaatacata 20840541  T
Q  564 tttaag 569  Q
    ||||||    
T  20840540 tttaag 20840535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 388 - 453
Target Start/End: Original strand, 22870379 - 22870444
Alignment:
Q  388 tgagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcggg 453  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| || ||||| ||||| ||||    
T  22870379 tgagggtatttttgtccattcccatgtcattttgctaatttgatgacgtggcagtgattaatcggg 22870444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 504 - 569
Target Start/End: Original strand, 28771199 - 28771264
Alignment:
Q  504 gattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    ||||||||| ||||  |||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  28771199 gattagcgattacatggaccaatttttaaacgacccctaattacaaggatcaaatacatatttaag 28771264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 505 - 569
Target Start/End: Complemental strand, 18247152 - 18247088
Alignment:
Q  505 attagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    |||||||| ||||  |||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  18247152 attagcgattacatggaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaag 18247088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 389 - 433
Target Start/End: Complemental strand, 20153100 - 20153056
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatga 433  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  20153100 gagggtatttttgtccattcccatgccattttgctaatttgatga 20153056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 485 - 569
Target Start/End: Complemental strand, 24547263 - 24547179
Alignment:
Q  485 tgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    |||||| ||||||| ||||||||||||| ||||  ||||||||||| || ||||||||||| ||||||| || ||||||||||||    
T  24547263 tgcaaggctagtttgcaaggattagcgattacagggaccaattttttaacgacccctaattgcaaggatcaagtacatatttaag 24547179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 461 - 569
Target Start/End: Complemental strand, 27587258 - 27587150
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| ||||||  ||||| |  ||  || | ||||||||||| ||||  |||||||||||||| ||||||||||| ||||||| ||||||    
T  27587258 acgaaattttaaatgattaaacgatgcaggggtaaattgccaggattagcgattacagggaccaatttttaaacgacccctaattgcaaggatcaaatac 27587159  T
Q  561 atatttaag 569  Q
    |||||||||    
T  27587158 atatttaag 27587150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 391 - 447
Target Start/End: Complemental strand, 36476945 - 36476889
Alignment:
Q  391 gggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcatta 447  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||||    
T  36476945 gggtatttttgtcaattcccatgccattttgctaatttgatgatgtggcagtgatta 36476889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 461 - 569
Target Start/End: Original strand, 38475317 - 38475425
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| ||||||||  ||  ||   ||||||| ||| ||||  |||||||||||||| ||||||||||| |||||||||||| |    
T  38475317 acgaaattttaaatgattaaacaatgcaagggtaaattgtcaggattaacgattacatggaccaatttttaaacgacccctaattgcaaggatgaaatgc 38475416  T
Q  561 atatttaag 569  Q
    |||||||||    
T  38475417 atatttaag 38475425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 461 - 569
Target Start/End: Complemental strand, 18670309 - 18670204
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| ||||||||  ||  || |   ||||||||| ||||  |||||||||||||| |||||||| || ||||||||||||||    
T  18670309 acgaaattttaaatgattaaacaatgcaagggtaaattgc---gattagcgattacagggaccaatttttaaacgacccctacttgcaaggatgaaatac 18670213  T
Q  561 atatttaag 569  Q
    |||||||||    
T  18670212 atatttaag 18670204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 461 - 570
Target Start/End: Complemental strand, 16083087 - 16082978
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| ||||||||  ||  || | ||||||| ||| ||||  ||| ||||||||||  ||||||||||  |||||||||||||    
T  16083087 acgaaattttaaatgattaaacaatgcaagggtaaattgccaggattatcgattacagggactaatttttaaacaacccctaattggaaggatgaaatac 16082988  T
Q  561 atatttaagt 570  Q
    ||||||||||    
T  16082987 atatttaagt 16082978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 520 - 569
Target Start/End: Original strand, 16157232 - 16157281
Alignment:
Q  520 gaccaatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  16157232 gaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaag 16157281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 461 - 569
Target Start/End: Original strand, 3529160 - 3529268
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| |||| | |  ||  || | ||||||| ||| ||||  |||||||||||||| ||||||||||| ||||||| ||||||    
T  3529160 acgaaattttaaatgattaaacaatgtaggggtaaattgccaggattaacgattacagggaccaatttttaaacgacccctaattgcaaggatcaaatac 3529259  T
Q  561 atatttaag 569  Q
    |||||||||    
T  3529260 atatttaag 3529268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 461 - 569
Target Start/End: Complemental strand, 17202509 - 17202401
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    ||||||||||||||  ||||| ||||||||  ||  ||   ||||||||||| ||||  |||||||||||||| |||||||||||  ||||||||||||     
T  17202509 acgaaattttaaatgcttaaacaatgcaagggtaaattgtcaggattagcgattacagtgaccaatttttaaacgacccctaattggaaggatgaaatat 17202410  T
Q  561 atatttaag 569  Q
    |||||||||    
T  17202409 atatttaag 17202401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 500 - 568
Target Start/End: Original strand, 18670507 - 18670575
Alignment:
Q  500 caaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaa 568  Q
    |||||||| ||||||||| ||||||||||||||| ||  | |||||||||||| |||||||||||||||    
T  18670507 caaggattggcgaatacagagaccaatttttaaacgattcataattacaaggaagaaatacatatttaa 18670575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 391 - 447
Target Start/End: Complemental strand, 20072301 - 20072245
Alignment:
Q  391 gggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcatta 447  Q
    ||||||||||||| ||||||||||||||||||||||||||||| || ||||| ||||    
T  20072301 gggtatttttgtcaattcccatgccattttgctaatttgatgacgtggcagtgatta 20072245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 391 - 447
Target Start/End: Original strand, 20072789 - 20072845
Alignment:
Q  391 gggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcatta 447  Q
    ||||||||||||| ||||||||||||||||||||||||||||| || ||||| ||||    
T  20072789 gggtatttttgtcaattcccatgccattttgctaatttgatgacgtggcagtgatta 20072845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 461 - 569
Target Start/End: Original strand, 35920502 - 35920610
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| |||| |||  ||  ||   ||||||||||| ||||  |||||||||||||| ||||||||||| | | ||||||||||    
T  35920502 acgaaattttaaatgattaaacaatggaaggataaattgtcaggattagcgattacagggaccaatttttaaacgacccctaattgctatgatgaaatac 35920601  T
Q  561 atatttaag 569  Q
    |||||||||    
T  35920602 atatttaag 35920610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #83
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 391 - 447
Target Start/End: Original strand, 36477296 - 36477352
Alignment:
Q  391 gggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcatta 447  Q
    ||||||||||||| ||||||||||||||||||||||||||||| || ||||| ||||    
T  36477296 gggtatttttgtcaattcccatgccattttgctaatttgatgacgtggcagtgatta 36477352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #84
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 391 - 447
Target Start/End: Original strand, 39181716 - 39181772
Alignment:
Q  391 gggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcatta 447  Q
    ||||||||||||| ||||||||||||||||||||||||||||| || ||||| ||||    
T  39181716 gggtatttttgtcaattcccatgccattttgctaatttgatgacgtggcagtgatta 39181772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #85
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 391 - 433
Target Start/End: Complemental strand, 39181237 - 39181195
Alignment:
Q  391 gggtatttttgtccattcccatgccattttgctaatttgatga 433  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  39181237 gggtatttttgtcaattcccatgccattttgctaatttgatga 39181195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #86
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 464 - 569
Target Start/End: Complemental strand, 5835730 - 5835625
Alignment:
Q  464 aaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacata 563  Q
    ||||||||||| ||||||   ||||||  || ||| ||| ||||| |||||||||  ||||||||||||| || ||||||||| ||  ||||||||||||    
T  5835730 aaattttaaatgattaaactttgcaagggtaatttgcaaagattaacgaatacaagaaccaatttttaaacgatccctaattaaaaaaatgaaatacata 5835631  T
Q  564 tttaag 569  Q
    ||||||    
T  5835630 tttaag 5835625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #87
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 461 - 569
Target Start/End: Original strand, 21265459 - 21265568
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagt-ttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaata 559  Q
    ||||||||||||||||||||| ||||||||  ||   || | | ||||||||| ||||   ||||||||||||| ||||| |||||  ||||||||||||    
T  21265459 acgaaattttaaataattaaacaatgcaagggtaaaattgccacgattagcgattacaggaaccaatttttaaacgacccttaattgtaaggatgaaata 21265558  T
Q  560 catatttaag 569  Q
    ||||||||||    
T  21265559 catatttaag 21265568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #88
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 520 - 569
Target Start/End: Original strand, 30096919 - 30096968
Alignment:
Q  520 gaccaatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    ||||| ||||||||||||||||||||||| ||||||||||| ||||||||    
T  30096919 gaccattttttaaatgacccctaattacagggatgaaatacgtatttaag 30096968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #89
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 461 - 569
Target Start/End: Complemental strand, 186529 - 186422
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| ||||||||  ||  || | || |||| ||| ||||| ||| |||||||||| ||||||||||| ||| |||||||||     
T  186529 acgaaattttaaatgattaaacaatgcaaggttaaatttccagaattaacgattacaatgactaatttttaaacgacccctaatttcaa-gatgaaataa 186431  T
Q  561 atatttaag 569  Q
    |||||||||    
T  186430 atatttaag 186422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #90
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 461 - 569
Target Start/End: Original strand, 14194741 - 14194848
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| ||||||||  ||  || | ||||||||  | ||||  | |||||||||||| ||||||||||||||||||||||| ||    
T  14194741 acgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagtaattacatgg-ccaatttttaaacgacccctaattacaaggatgaaagac 14194839  T
Q  561 atatttaag 569  Q
    || ||||||    
T  14194840 atttttaag 14194848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #91
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 391 - 447
Target Start/End: Original strand, 16533545 - 16533601
Alignment:
Q  391 gggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcatta 447  Q
    ||||||||||||| |||||||||||||||||||||||| |||| || ||||| ||||    
T  16533545 gggtatttttgtcaattcccatgccattttgctaatttaatgacgtggcagtgatta 16533601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #92
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 391 - 453
Target Start/End: Complemental strand, 20857113 - 20857050
Alignment:
Q  391 gggtatttttgtccattcccatgcca-ttttgctaatttgatgatgtagcagtcattaagcggg 453  Q
    ||||||||||||| |||||||||||| ||||||||||||||||| || ||||| ||||| ||||    
T  20857113 gggtatttttgtcaattcccatgccatttttgctaatttgatgacgtggcagtgattaaccggg 20857050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #93
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 391 - 453
Target Start/End: Original strand, 20857466 - 20857529
Alignment:
Q  391 gggtatttttgtccattcccatgcca-ttttgctaatttgatgatgtagcagtcattaagcggg 453  Q
    ||||||||||||| |||||||||||| ||||||||||||||||| || ||||| ||||| ||||    
T  20857466 gggtatttttgtcaattcccatgccatttttgctaatttgatgaggtggcagtgattaaccggg 20857529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #94
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 461 - 570
Target Start/End: Original strand, 5256330 - 5256438
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||  |||| ||| ||| ||| ||||||||||  | ||||  |||||||||||||| || |||||||| |||||| || ||||    
T  5256330 acgaaattttaaatgattaacaaatgtaaggctaatttgcaaggattagtcattacattgaccaatttttaaacga-ccctaattgcaaggacgagatac 5256428  T
Q  561 atatttaagt 570  Q
    ||||| ||||    
T  5256429 atattaaagt 5256438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #95
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 409 - 490
Target Start/End: Complemental strand, 21287905 - 21287824
Alignment:
Q  409 ccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaag 490  Q
    |||||||||||||||||||| |||| || | ||| ||||||  |||||||  |||||||||||||| |||||| ||| ||||    
T  21287905 ccatgccattttgctaatttaatgacgtggtagtgattaagttggtcaaatgacgaaattttaaatgattaaacaatacaag 21287824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #96
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 440 - 565
Target Start/End: Complemental strand, 24141583 - 24141458
Alignment:
Q  440 agtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgaccc 539  Q
    |||||||||  ||||||| | | |||||||||||| ||||||   |||||| ||| ||| | ||||||| ||| ||||  ||||||||||||||||||      
T  24141583 agtcattaaatgggtcaagggatgaaattttaaatgattaaactttgcaaggctaatttgccaggattaacgattacagggaccaatttttaaatgacgt 24141484  T
Q  540 ctaattacaaggatgaaatacatatt 565  Q
    |||||| || ||| |||| |||||||    
T  24141483 ctaattgcagggacgaaacacatatt 24141458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #97
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 523 - 568
Target Start/End: Original strand, 27937379 - 27937424
Alignment:
Q  523 caatttttaaatgacccctaattacaaggatgaaatacatatttaa 568  Q
    ||||||||||| ||||| ||||| ||||||||||||||||||||||    
T  27937379 caatttttaaacgacccataattgcaaggatgaaatacatatttaa 27937424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #98
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 391 - 447
Target Start/End: Complemental strand, 16533073 - 16533017
Alignment:
Q  391 gggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcatta 447  Q
    ||||||||||||  |||||||||||||||||||||||| |||| || ||||| ||||    
T  16533073 gggtatttttgtgaattcccatgccattttgctaatttaatgacgtggcagtgatta 16533017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #99
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 464 - 552
Target Start/End: Original strand, 41930806 - 41930894
Alignment:
Q  464 aaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaagga 552  Q
    ||||||||||| |||||  | |||||| |||  || ||||||||||| | ||||  ||| |||||||||||||| ||||||||||||||    
T  41930806 aaattttaaatgattaacaattgcaaggctaaattgcaaggattagcaattacagggacgaatttttaaatgacgcctaattacaagga 41930894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #100
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 461 - 565
Target Start/End: Original strand, 42067842 - 42067946
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||||  |||| |   ||||| | ||||||| | | ||||  |||||| ||||||||||||||||||| || |||||||| ||    
T  42067842 acgaaattttaaatgattaaagtttgcaggggcagtttgccaggattatcaattacagggaccaaattttaaatgacccctaattgcagggatgaaacac 42067941  T
Q  561 atatt 565  Q
    |||||    
T  42067942 atatt 42067946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #101
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 502 - 565
Target Start/End: Original strand, 40150173 - 40150236
Alignment:
Q  502 aggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatt 565  Q
    ||||||| ||| ||||  |||||||||| ||||||||||||||| |||||| |||| |||||||    
T  40150173 aggattaacgattacagggaccaattttaaaatgacccctaattgcaaggacgaaacacatatt 40150236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #102
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 438 - 508
Target Start/End: Complemental strand, 13362360 - 13362290
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggatta 508  Q
    ||||| ||||||  ||||| || |||||||||||||| ||||| || |||||| ||||||| |||||||||    
T  13362360 gcagtgattaagttggtcagaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggatta 13362290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 121; Significance: 1e-61; HSPs: 68)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 388 - 568
Target Start/End: Complemental strand, 6588866 - 6588686
Alignment:
Q  388 tgagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgc 487  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  | ||||| || ||  ||||||||| |||||||||||||| ||||||||||||    
T  6588866 tgagggtatttttgtccattcccatgccattttgctaatttgatgacctggcagtgatcaactgggtcaaaggacgaaattttaaatgattaaagaatgc 6588767  T
Q  488 aagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaa 568  Q
    ||| ||||||| ||||||||||||||||||  |||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  6588766 aaggctagtttgcaaggattagcgaatacatggaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaa 6588686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 391 - 569
Target Start/End: Complemental strand, 3555430 - 3555252
Alignment:
Q  391 gggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaag 490  Q
    |||||||| ||| | ||| |||||||||||| |||||||||||| | ||||| |||||  |||| |||| |||||||||||||| |||||||||||||||    
T  3555430 gggtatttatgttctttctcatgccattttgttaatttgatgatctggcagtgattaactgggttaaaggacgaaattttaaatgattaaagaatgcaag 3555331  T
Q  491 actagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
     ||| |||  ||||| || |||||||| ||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  3555330 gctaatttgtaaggaataacgaatacagagaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaag 3555252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 388 - 569
Target Start/End: Complemental strand, 25230285 - 25230104
Alignment:
Q  388 tgagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgc 487  Q
    ||||||||||||||||||||| ||||||||||||| ||| ||||||||| ||||| |||||  |||   | | |||||||||||||| ||||   | |||    
T  25230285 tgagggtatttttgtccattcgcatgccattttgccaatctgatgatgtggcagtaattaactgggctcagggacgaaattttaaatgattagtaattgc 25230186  T
Q  488 aagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    ||| ||||||| ||||||||||||||||||  |||||||||||||| ||||||||||| || |||| |||||||||||||||    
T  25230185 aaggctagtttgcaaggattagcgaatacagggaccaatttttaaacgacccctaattgcagggattaaatacatatttaag 25230104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 389 - 562
Target Start/End: Original strand, 8710712 - 8710885
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || ||||| || |||  |||||||| |||||||||||||| |||||| ||||||    
T  8710712 gagggtatttttgtccattcccatgccattttgctaatttgatgacgtggcagtgataaagttggtcaaaggacgaaattttaaatgattaaacaatgca 8710811  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    ||  ||  ||   ||||||||||| ||||  ||| |||||||||||||| ||||||| |||||| |||| ||||    
T  8710812 agggtaaattgtcaggattagcgattacatggactaatttttaaatgacgcctaattgcaaggacgaaacacat 8710885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 438 - 567
Target Start/End: Complemental strand, 44713928 - 44713799
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  |||||||| |||||||||||||| ||||| || |||||| ||||||| ||||||||||||||||||  |||||||||||||| |||    
T  44713928 gcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacattgaccaatttttaaacgac 44713829  T
Q  538 ccctaattacaaggatgaaatacatattta 567  Q
    || |||||||||||||||||||||||||||    
T  44713828 ccttaattacaaggatgaaatacatattta 44713799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 389 - 552
Target Start/End: Original strand, 15604583 - 15604746
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |  ||||| ||||||  |||||||| |||||||||||||| |||||| ||||||    
T  15604583 gagggtatttttgtccattcccatgccattttgctaatttgatgacggggcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaatgca 15604682  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaagga 552  Q
    ||  ||  || | ||||||||||| ||||  ||| | |||||||||||| ||||||| ||||||    
T  15604683 agggtaaattgccaggattagcgattacagggactagtttttaaatgacacctaattgcaagga 15604746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 438 - 570
Target Start/End: Original strand, 36480013 - 36480145
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  |||||||| |||||||||||||| ||||| || |||||| ||||||| |||||||||||||||| |  |||||||||||||| |||    
T  36480013 gcagtgattaagttggtcaaaggacgaaattttaaattattaatgattgcaaggctagtttgcaaggattagcgaatatagggaccaatttttaaacgac 36480112  T
Q  538 ccctaattacaaggatgaaatacatatttaagt 570  Q
    || ||||| ||||||||||||||||||||||||    
T  36480113 ccttaattgcaaggatgaaatacatatttaagt 36480145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 438 - 569
Target Start/End: Original strand, 36382422 - 36382553
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  || ||||| |||||||||||||| ||||| || |||||||||||||| || |||||||||||||||  |||||||||||||| |||    
T  36382422 gcagtgattaagttggccaaaggacgaaattttaaatgattaacgattgcaagactagtttgcatggattagcgaatacagggaccaatttttaaacgac 36382521  T
Q  538 ccctaattacaaggatgaaatacatatttaag 569  Q
    || ||||| |||||||||||||||||||||||    
T  36382522 ccttaattgcaaggatgaaatacatatttaag 36382553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 438 - 569
Target Start/End: Complemental strand, 37895480 - 37895349
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  |||||||| | |||||||||||| ||||| || |||||| ||||||| ||||||||||||||||||  |||||||||||||| |||    
T  37895480 gcagtgattaagttggtcaaaggatgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacagggaccaatttttaaacgac 37895381  T
Q  538 ccctaattacaaggatgaaatacatatttaag 569  Q
    || ||||| |||||||||||||||||||||||    
T  37895380 ccttaattgcaaggatgaaatacatatttaag 37895349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 438 - 569
Target Start/End: Original strand, 39423810 - 39423941
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  |||||||| || ||||||||||| ||||| || |||||||||||||| |||||||||||||||| |  || ||||||||||| |||    
T  39423810 gcagtgattaagttggtcaaaggacaaaattttaaatgattaatgattgcaagactagtttgcaaggattagcgaatatagggatcaatttttaaacgac 39423909  T
Q  538 ccctaattacaaggatgaaatacatatttaag 569  Q
    |||||||| |||||||||||||||||||||||    
T  39423910 ccctaattgcaaggatgaaatacatatttaag 39423941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 388 - 562
Target Start/End: Complemental strand, 15604522 - 15604348
Alignment:
Q  388 tgagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgc 487  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||  | | ||| ||||||  | |||||| |||||||||||||| |||||| |||||    
T  15604522 tgagggtatttttgtccattcccatgccattttgctaatttcatgacttggtagtgattaagttgatcaaaggacgaaattttaaatgattaaacaatgc 15604423  T
Q  488 aagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    |||  ||  || | ||||||||||| ||||  ||| |||||||||||||| ||||||| |||||| |||| ||||    
T  15604422 aagggtaaattgccaggattagcgattacagggactaatttttaaatgacacctaattgcaaggacgaaacacat 15604348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 439 - 569
Target Start/End: Original strand, 36755384 - 36755514
Alignment:
Q  439 cagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacc 538  Q
    |||| ||||||  |||||||| |||||||||||||| ||||| || |||||| ||||||| ||||||||||||| || |  |||||||||||||| ||||    
T  36755384 cagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgattatagggaccaatttttaaacgacc 36755483  T
Q  539 cctaattacaaggatgaaatacatatttaag 569  Q
    ||||||| |||||||||||||||||||||||    
T  36755484 cctaattgcaaggatgaaatacatatttaag 36755514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 439 - 560
Target Start/End: Original strand, 13692516 - 13692637
Alignment:
Q  439 cagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacc 538  Q
    |||| ||||||  |||||||| |||||||||||||| ||||| || |||||| ||||||| ||||||||||||||||||  |||||||||||||| ||||    
T  13692516 cagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacagggaccaatttttaaacgacc 13692615  T
Q  539 cctaattacaaggatgaaatac 560  Q
    ||||||| ||||||||||||||    
T  13692616 cctaattgcaaggatgaaatac 13692637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 438 - 569
Target Start/End: Original strand, 10713018 - 10713149
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  |||||||| |||| ||||||||| ||||| || |||||| ||| ||| |||||||||||||||||| | ||||||||||||| |||    
T  10713018 gcagtgattaagttggtcaaaggacgacattttaaatgattaacgattgcaaggctaatttgcaaggattagcgaatacagaaaccaatttttaaacgac 10713117  T
Q  538 ccctaattacaaggatgaaatacatatttaag 569  Q
    || ||||| |||||||||||||||||||||||    
T  10713118 ccttaattgcaaggatgaaatacatatttaag 10713149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 438 - 569
Target Start/End: Original strand, 15848383 - 15848514
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  |||||||| |||||||||||||| ||||| || ||||||  |||||  |||||||||||||||||| | ||||||||||||| |||    
T  15848383 gcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaaggttagttcgcaaggattagcgaatacataaaccaatttttaaacgac 15848482  T
Q  538 ccctaattacaaggatgaaatacatatttaag 569  Q
    |||||||| |||||||||||||| ||||||||    
T  15848483 ccctaattgcaaggatgaaatacttatttaag 15848514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 438 - 569
Target Start/End: Original strand, 16099319 - 16099450
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  |||||||| || ||||||||||| ||||| || |||||| ||||||| |||||||||| |||||||  |||||||||||||| |||    
T  16099319 gcagtgattaagttggtcaaaggactaaattttaaatgattaatgattgcaaggctagtttgcaaggattagtgaatacagggaccaatttttaaacgac 16099418  T
Q  538 ccctaattacaaggatgaaatacatatttaag 569  Q
    |||||||| ||||||| |||||||||||||||    
T  16099419 ccctaattgcaaggatcaaatacatatttaag 16099450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 438 - 569
Target Start/End: Original strand, 34448090 - 34448221
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  |||||||| |||||||||||||| ||||| || |||||||||||||| ||||||||| |||||| |  ||||||||||||||  ||    
T  34448090 gcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaagactagtttgcaaggattaacgaatatagggaccaatttttaaacaac 34448189  T
Q  538 ccctaattacaaggatgaaatacatatttaag 569  Q
    |||||||| |||||||||||||||| ||||||    
T  34448190 ccctaattgcaaggatgaaatacatgtttaag 34448221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 438 - 569
Target Start/End: Original strand, 45556342 - 45556473
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  |||||||| |  ||||||||||| ||||| || |||||| ||||||| ||| ||||||||||||||  |||||||||||||| |||    
T  45556342 gcagtgattaagttggtcaaaggattaaattttaaatgattaatgattgcaaggctagtttgcaaagattagcgaatacagcgaccaatttttaaacgac 45556441  T
Q  538 ccctaattacaaggatgaaatacatatttaag 569  Q
    |||||||||||||||| |||||||||||||||    
T  45556442 ccctaattacaaggatcaaatacatatttaag 45556473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 431 - 569
Target Start/End: Original strand, 9076355 - 9076493
Alignment:
Q  431 tgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaattttt 530  Q
    |||||| ||||| ||||||  ||| |||  |||||||||||||| ||||| || |||||||||||||| ||||||||| |||||||  ||||||||||||    
T  9076355 tgatgtggcagtgattaagttggttaaatgacgaaattttaaatgattaatgattgcaagactagtttgcaaggattaacgaatacggagaccaattttt 9076454  T
Q  531 aaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    ||| ||||||||||| |||| || |||||||||||||||    
T  9076455 aaacgacccctaattgcaagaataaaatacatatttaag 9076493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 389 - 562
Target Start/End: Complemental strand, 8342369 - 8342196
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    ||||||||||||||| |||||||||||||||||||||||||||||  | | ||| ||||||  |||||||| |||||||||||||| |||||| ||||||    
T  8342369 gagggtatttttgtcaattcccatgccattttgctaatttgatgacttggtagtgattaagttggtcaaaggacgaaattttaaatgattaaacaatgca 8342270  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    ||  ||  || | ||||||| | | |||| |||| |||||||||||||| | ||||| |||||| |||| ||||    
T  8342269 aggataaattgccaggattaccaattacatagactaatttttaaatgacgcttaattgcaaggacgaaacacat 8342196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 438 - 569
Target Start/End: Original strand, 6658142 - 6658273
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  |||||||| || ||||||||||| ||||| || || ||| ||||||| ||||||||||||||||||  |||||||||||||| |||    
T  6658142 gcagtgattaagttggtcaaaggactaaattttaaatgattaatgattgtaaggctagtttgcaaggattagcgaatacagggaccaatttttaaacgac 6658241  T
Q  538 ccctaattacaaggatgaaatacatatttaag 569  Q
    | |||||| ||||||| |||||||||||||||    
T  6658242 ctctaattgcaaggatcaaatacatatttaag 6658273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 438 - 569
Target Start/End: Complemental strand, 11163187 - 11163056
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  |||||||| || ||||||||||| ||||| || |||||||||||||| ||||||||||||||||||  |||||||||||||| |||    
T  11163187 gcagtgattaagttggtcaaaggactaaattttaaatgattaatgattgcaagactagtttgcaaggattagcgaatacagggaccaatttttaaacgac 11163088  T
Q  538 ccctaattacaaggatgaaatacatatttaag 569  Q
    |  ||||| ||| ||| |||||||||||||||    
T  11163087 ctttaattgcaaagatcaaatacatatttaag 11163056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 438 - 569
Target Start/End: Original strand, 39498574 - 39498705
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  |||||||| |  ||||||||||| ||||| || |||||| ||||||| ||||||||||||||||||  |||||||||||||| ||     
T  39498574 gcagtgattaagttggtcaaaggattaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacatggaccaatttttaaacgat 39498673  T
Q  538 ccctaattacaaggatgaaatacatatttaag 569  Q
    |||||||| ||||||| |||||||||||||||    
T  39498674 ccctaattgcaaggatcaaatacatatttaag 39498705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 463 - 569
Target Start/End: Original strand, 3556329 - 3556435
Alignment:
Q  463 gaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    |||||||||||| ||||||||||||||| ||||||| ||||||||| ||| |||| ||||||||||||||| ||||| ||||| ||||||||||||  ||    
T  3556329 gaaattttaaatgattaaagaatgcaaggctagtttgcaaggattaacgattacagagaccaatttttaaacgacccataattgcaaggatgaaatgtat 3556428  T
Q  563 atttaag 569  Q
    |||||||    
T  3556429 atttaag 3556435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 392 - 562
Target Start/End: Complemental strand, 41587413 - 41587244
Alignment:
Q  392 ggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaaga 491  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||  |||| ||||||  ||| |||| | |||||||||||| |||||| ||||||||     
T  41587413 ggtatttttgtccattcccatgcaattttgctaatttgatgacgtgacagtgattaagttggttaaaggatgaaattttaaatgattaaacaatgcaagg 41587314  T
Q  492 ctagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
     || ||| | ||||||| ||| ||| | |||||||||||||||||| | ||||| |||||| |||| ||||    
T  41587313 gtaattttccaggattaacgattac-aggaccaatttttaaatgactcttaattgcaaggacgaaacacat 41587244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 389 - 562
Target Start/End: Complemental strand, 11830546 - 11830373
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||| ||   ||||||  |||||||||||||| |||||| ||||||    
T  11830546 gagggtatttttgtccattcccatgccattttgctaatttgatgacgtggcagtgattgagtttgtcaaatgacgaaattttaaatgattaaacaatgca 11830447  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    ||  ||  ||   ||||||||| | ||||  ||| ||||||||||||||  |||||| |||||| |||| ||||    
T  11830446 agggtaaattgttaggattagcaattacagggactaatttttaaatgacgtctaattgcaaggacgaaacacat 11830373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 436 - 569
Target Start/End: Complemental strand, 30729756 - 30729623
Alignment:
Q  436 tagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatg 535  Q
    ||||||| |||||  ||||||||| |||||||||||||  |||||||||||||||   | ||| |||||||||||||||| |  |||||||||||||| |    
T  30729756 tagcagtgattaactgggtcaaaggacgaaattttaaacgattaaagaatgcaagggcaatttgcaaggattagcgaatatagggaccaatttttaaacg 30729657  T
Q  536 acccctaattacaaggatgaaatacatatttaag 569  Q
    ||  |||||| |||||||||||||||||||||||    
T  30729656 acgtctaattgcaaggatgaaatacatatttaag 30729623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 464 - 569
Target Start/End: Original strand, 44045323 - 44045428
Alignment:
Q  464 aaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacata 563  Q
    ||||||||||| ||||| || |||||| ||||||| ||||||||||||||||||  |||||||||||||| ||||||||||| || |||| |||||||||    
T  44045323 aaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacagggaccaatttttaaacgacccctaattgcagggatcaaatacata 44045422  T
Q  564 tttaag 569  Q
    ||||||    
T  44045423 tttaag 44045428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 407 - 562
Target Start/End: Original strand, 28226006 - 28226161
Alignment:
Q  407 tcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggat 506  Q
    |||||||||||||||||||||||||||  | | ||| ||||||  |||||||| |||||||||||||| |||||| ||||||||  ||  || | |||||    
T  28226006 tcccatgccattttgctaatttgatgacttggtagtgattaagttggtcaaagtacgaaattttaaatgattaaacaatgcaagggtaaattgccaggat 28226105  T
Q  507 tagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    |||||| ||||  ||| |||||||||||||| ||||||| |||||| |||| ||||    
T  28226106 tagcgattacagggactaatttttaaatgacgcctaattgcaaggacgaaacacat 28226161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 392 - 565
Target Start/End: Original strand, 202605 - 202778
Alignment:
Q  392 ggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaaga 491  Q
    |||||||||||| |||| |||||||||||||||||||||| | || | ||| |||||| ||||  | | |||||||||||||| ||||||   ||||||     
T  202605 ggtatttttgtctattctcatgccattttgctaatttgataacgtgggagtaattaagtgggtgtagggacgaaattttaaatgattaaactctgcaagg 202704  T
Q  492 ctagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatt 565  Q
    ||| ||| | ||||||| ||| ||||  ||| ||||||||||||||||||||||||| |||  ||| |||||||    
T  202705 ctaatttgccaggattaacgattacatggacgaatttttaaatgacccctaattacagggacaaaacacatatt 202778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 389 - 562
Target Start/End: Original strand, 41588302 - 41588475
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||  | ||||| ||||||  |||||||| | |||||||||||| |||||| |||| |    
T  41588302 gagggtatttttgtcaatttccatgccattttgctaatttgatgacttggcagtgattaagttggtcaaaggatgaaattttaaatgattaaacaatgta 41588401  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    ||  ||  || | || |||||||| ||||  ||| |||||||||||||| |||||||  ||||| |||| ||||    
T  41588402 agtgtaaattgccagaattagcgattacagggactaatttttaaatgacgcctaattgtaaggacgaaacacat 41588475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 461 - 569
Target Start/End: Complemental strand, 15848198 - 15848090
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| ||||||||  ||  |||| ||||||||||| ||||  |||||||||||||| ||||||||||| ||||||||||||||    
T  15848198 acgaaattttaaatgattaaacaatgcaagggtaaattaccaggattagcgattacagggaccaatttttaaacgacccctaattgcaaggatgaaatac 15848099  T
Q  561 atatttaag 569  Q
    |||| ||||    
T  15848098 atatataag 15848090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 461 - 569
Target Start/End: Original strand, 21370520 - 21370628
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| ||||| || |||||  ||||||| ||||||||| ||||||||  || ||||||||||| ||||  ||||||||||||||||||||    
T  21370520 acgaaattttaaattattaatgattgcaatgctagtttgcaaggattaacgaatacatggatcaatttttaaacgacctataattacaaggatgaaatac 21370619  T
Q  561 atatttaag 569  Q
    |||||||||    
T  21370620 atatttaag 21370628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 388 - 480
Target Start/End: Original strand, 25624350 - 25624442
Alignment:
Q  388 tgagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaa 480  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||| |||||  | | |||||||||||||| |||||    
T  25624350 tgagggtatttttgtccattcccatgccattttgttaatttgatgatgtggcagtgattaaccgggtagagggacgaaattttaaatgattaa 25624442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 438 - 569
Target Start/End: Original strand, 25231143 - 25231274
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    |||||||||||  ||| ||| | |||||||||||||| |||||||  ||||||  || ||| | ||||||||||||||||  |||||||||||||| |||    
T  25231143 gcagtcattaactgggacaagggacgaaattttaaatgattaaagtttgcaagggtaatttgctaggattagcgaatacatggaccaatttttaaacgac 25231242  T
Q  538 ccctaattacaaggatgaaatacatatttaag 569  Q
    |||||||| || |||| |||||||||||||||    
T  25231243 ccctaattgcagggattaaatacatatttaag 25231274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 469 - 569
Target Start/End: Original strand, 2318836 - 2318936
Alignment:
Q  469 ttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaa 568  Q
    |||||| ||||| || |||||||||||||| ||| || |||||||||||   ||||||||||||| |||||||||||  |||||||||||||||||||||    
T  2318836 ttaaatgattaatgattgcaagactagtttgcaacgaatagcgaatacatgaaccaatttttaaacgacccctaattggaaggatgaaatacatatttaa 2318935  T
Q  569 g 569  Q
    |    
T  2318936 g 2318936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 388 - 480
Target Start/End: Complemental strand, 25623471 - 25623379
Alignment:
Q  388 tgagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaa 480  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| || ||||| ||||| |||||  | | |||||||||||||| |||||    
T  25623471 tgagggtatttttgtccattcccatgccattttgttaatttgatgacgtggcagtgattaaccgggtagagggacgaaattttaaatgattaa 25623379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 391 - 529
Target Start/End: Original strand, 39936495 - 39936633
Alignment:
Q  391 gggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaag 490  Q
    |||||||||||||| || ||||||||||||||||||||||||| || ||| | |||||   |||||||| |||||||||||||| ||||||   ||||||    
T  39936495 gggtatttttgtccttttccatgccattttgctaatttgatgacgtggcattgattaaattggtcaaaggacgaaattttaaatgattaaactttgcaag 39936594  T
Q  491 actagtttacaaggattagcgaatacaaagaccaatttt 529  Q
      || ||| | ||||||| ||| ||||| ||||||||||    
T  39936595 ggtaatttgccaggattaacgattacaaggaccaatttt 39936633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 520 - 569
Target Start/End: Complemental strand, 34447864 - 34447815
Alignment:
Q  520 gaccaatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34447864 gaccaatttttaaatgacccctaattacaaggatgaaatacatatttaag 34447815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 461 - 569
Target Start/End: Complemental strand, 39423625 - 39423517
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| ||| ||||  ||  || | || |||||||| |||| ||||||||||||||| ||||| ||||||||||||||||||||    
T  39423625 acgaaattttaaatgattaaacaatacaaggataaattgccagaattagcgattacagagaccaatttttaaacgacccgtaattacaaggatgaaatac 39423526  T
Q  561 atatttaag 569  Q
     ||||||||    
T  39423525 gtatttaag 39423517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 461 - 569
Target Start/End: Complemental strand, 44044224 - 44044116
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| ||||| || | ||||  |||||| |||||||||| |||||||  ||||||||||||||  |||||||||| || |||| ||||||    
T  44044224 acgaaattttaaatgattaatgattacaaggttagttttcaaggattagtgaatacagggaccaatttttaaaccacccctaattgcagggatcaaatac 44044125  T
Q  561 atatttaag 569  Q
    |||||||||    
T  44044124 atatttaag 44044116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 388 - 433
Target Start/End: Complemental strand, 8710651 - 8710606
Alignment:
Q  388 tgagggtatttttgtccattcccatgccattttgctaatttgatga 433  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  8710651 tgagggtatttttgtccattcccatgccattttgctaatttgatga 8710606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 461 - 569
Target Start/End: Complemental strand, 2318268 - 2318161
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| ||||||||  ||  || | || |||||||| |||| |||||||||||||||  |||| ||||| ||||||||||||||    
T  2318268 acgaaattttaaatgattaaacaatgcaagggtaaattgccagaattagcgattacatagaccaatttttaaactaccc-taattgcaaggatgaaatac 2318170  T
Q  561 atatttaag 569  Q
    |||||||||    
T  2318169 atatttaag 2318161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 461 - 569
Target Start/End: Original strand, 11163341 - 11163449
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| ||||||    ||  || | ||||||||||| ||||  |||||||||||||| ||||||||||| ||||||| ||||||    
T  11163341 acgaaattttaaatgattaaacaatgcagaggtaaattgccaggattagcgattacagggaccaatttttaaacgacccctaattgcaaggatcaaatac 11163440  T
Q  561 atatttaag 569  Q
    |||||||||    
T  11163441 atatttaag 11163449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 461 - 569
Target Start/End: Complemental strand, 16099165 - 16099057
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| |||||| |  ||  || | |||||||| || ||||  |||||||||||||||||||||||||| |||| || ||||||    
T  16099165 acgaaattttaaatgattaaacaatgcaggggtaaattgccaggattagtgattacagggaccaatttttaaatgacccctaattgcaagaatcaaatac 16099066  T
Q  561 atatttaag 569  Q
    |||||||||    
T  16099065 atatttaag 16099057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 461 - 569
Target Start/End: Original strand, 22051311 - 22051419
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| ||||||||  ||  || | ||||||||||| |||| |||| ||||||||||  ||| |||||| |||| |||||||||    
T  22051311 acgaaattttaaatgattaaacaatgcaagggtaaattgctaggattagcgattacagagactaatttttaaacaacctctaattgcaagaatgaaatac 22051410  T
Q  561 atatttaag 569  Q
    |||||||||    
T  22051411 atatttaag 22051419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 391 - 481
Target Start/End: Complemental strand, 199188 - 199098
Alignment:
Q  391 gggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaa 481  Q
    |||||||||||||||||| |||||  ||||| ||||||||||||||  ||||||||||| |||| || | || ||||||||||| ||||||    
T  199188 gggtatttttgtccattcgcatgctcttttgttaatttgatgatgtgacagtcattaagtgggttaagggacaaaattttaaatgattaaa 199098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 463 - 569
Target Start/End: Original strand, 6307038 - 6307143
Alignment:
Q  463 gaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    |||||||||||| |||||| |||||| ||||| |||  |||||||| ||| || |  |||||||||||||| |||| |||||| ||| ||||||||||||    
T  6307038 gaaattttaaatgattaaataatgcaggactaatttgtaaggattaacgattatagggaccaatttttaaacgaccactaattgcaa-gatgaaatacat 6307136  T
Q  563 atttaag 569  Q
    |||||||    
T  6307137 atttaag 6307143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 391 - 453
Target Start/End: Original strand, 29958467 - 29958529
Alignment:
Q  391 gggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcggg 453  Q
    ||||||||||||| ||||||||||||||||||||||||||||| || ||||| ||||| ||||    
T  29958467 gggtatttttgtcaattcccatgccattttgctaatttgatgacgtggcagtgattaaccggg 29958529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 461 - 570
Target Start/End: Complemental strand, 36479828 - 36479718
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattac-aaggatgaaata 559  Q
    |||||||||||||| |||||| ||||||||  ||   | | | ||||||||| ||||  |||||||||||||| ||||||||||| | ||||||||||||    
T  36479828 acgaaattttaaatgattaaacaatgcaagggtaaaatgctaagattagcgattacatggaccaatttttaaacgacccctaattgcaaaggatgaaata 36479729  T
Q  560 catatttaagt 570  Q
    |||||||||||    
T  36479728 catatttaagt 36479718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 464 - 569
Target Start/End: Complemental strand, 45556219 - 45556114
Alignment:
Q  464 aaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacata 563  Q
    ||||||||||| |||||| |||||| |  ||  || | ||||||||||| ||||  |||||||||||||| || |||||||| ||||||| |||||||||    
T  45556219 aaattttaaatgattaaacaatgcagggataaattgccaggattagcgattacagggaccaatttttaaacgatccctaattgcaaggatcaaatacata 45556120  T
Q  564 tttaag 569  Q
    ||||||    
T  45556119 tttaag 45556114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 391 - 447
Target Start/End: Original strand, 20983181 - 20983237
Alignment:
Q  391 gggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcatta 447  Q
    ||||||||||||| ||||||||||||||||||||||||||||| || ||||| ||||    
T  20983181 gggtatttttgtcaattcccatgccattttgctaatttgatgacgtggcagtgatta 20983237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 391 - 447
Target Start/End: Complemental strand, 21103261 - 21103205
Alignment:
Q  391 gggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcatta 447  Q
    ||||||||||||| ||||||||||||||||||||||||||||| || ||||| ||||    
T  21103261 gggtatttttgtcaattcccatgccattttgctaatttgatgacgtggcagtgatta 21103205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 461 - 569
Target Start/End: Original strand, 44714079 - 44714186
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| ||||||||  ||  || | ||||||||| | ||||  ||| |||||||||| ||||||||||| ||||||||||| ||    
T  44714079 acgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcaattacagggactaatttttaaacgacccctaattgcaaggatgaaa-ac 44714177  T
Q  561 atatttaag 569  Q
    |||||||||    
T  44714178 atatttaag 44714186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 463 - 570
Target Start/End: Complemental strand, 10712831 - 10712724
Alignment:
Q  463 gaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    |||||||||||| |||||| ||||||||  ||  || | |||||||  || || || |||||||||||||| || |||||||| ||||||||||||||||    
T  10712831 gaaattttaaatgattaaacaatgcaagggtaaattgccaggattaatgattataaggaccaatttttaaacgaaccctaattgcaaggatgaaatacat 10712732  T
Q  563 atttaagt 570  Q
    | ||||||    
T  10712731 acttaagt 10712724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 461 - 568
Target Start/End: Original strand, 37895665 - 37895772
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| ||||||||  ||  || | ||||||||||| |||    |||| |||||||| ||||| ||||| ||||||||||||||    
T  37895665 acgaaattttaaatgattaaacaatgcaagtgtaaattgccaggattagcgattacgggaaccattttttaaacgacccataattgcaaggatgaaatac 37895764  T
Q  561 atatttaa 568  Q
    ||||||||    
T  37895765 atatttaa 37895772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 461 - 564
Target Start/End: Complemental strand, 39498420 - 39498317
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| |||| | |  ||  || | ||||||| ||| ||||  |||||||||||||| ||||||||||||||||||| ||||||    
T  39498420 acgaaattttaaatgattaaacaatgtaggggtaaattgccaggattaacgattacagggaccaatttttaaacgacccctaattacaaggatcaaatac 39498321  T
Q  561 atat 564  Q
    ||||    
T  39498320 atat 39498317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 391 - 433
Target Start/End: Complemental strand, 29957997 - 29957955
Alignment:
Q  391 gggtatttttgtccattcccatgccattttgctaatttgatga 433  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  29957997 gggtatttttgtcaattcccatgccattttgctaatttgatga 29957955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 463 - 569
Target Start/End: Complemental strand, 36382269 - 36382163
Alignment:
Q  463 gaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    |||||||||||| |||||| ||||||||  ||  ||   ||||||||||| || |  |||||||||||||| || |||||||| ||||||||||||||||    
T  36382269 gaaattttaaatgattaaacaatgcaagggtaaattgtcaggattagcgattatagggaccaatttttaaacgaaccctaattgcaaggatgaaatacat 36382170  T
Q  563 atttaag 569  Q
    | |||||    
T  36382169 acttaag 36382163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 461 - 569
Target Start/End: Complemental strand, 6657988 - 6657880
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| |||||| |  ||  || | | |||||| || ||||  |||||||||||||| |||||| |||| ||||||| ||||||    
T  6657988 acgaaattttaaatgattaaacaatgcaggggtaaattgccatgattagtgattacagggaccaatttttaaacgaccccaaattgcaaggatcaaatac 6657889  T
Q  561 atatttaag 569  Q
    |||||||||    
T  6657888 atatttaag 6657880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 391 - 447
Target Start/End: Complemental strand, 20982704 - 20982648
Alignment:
Q  391 gggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcatta 447  Q
    ||||||||||||| |||||||| |||||||||||||||||||| || ||||| ||||    
T  20982704 gggtatttttgtcaattcccataccattttgctaatttgatgacgtggcagtgatta 20982648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 394 - 562
Target Start/End: Original strand, 8342436 - 8342596
Alignment:
Q  394 tatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagact 493  Q
    |||||||||||||||||||||||        ||||||||| |  ||||| ||||||  | |||||| ||||||||||||||||||||| ||||||||  |    
T  8342436 tatttttgtccattcccatgcca--------atttgatgacgcggcagtgattaagttgttcaaaggacgaaattttaaataattaaacaatgcaagggt 8342527  T
Q  494 agtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    |  ||   |||||||  || |||| |||| |||||||||||||| |||||||  ||||| |||| ||||    
T  8342528 aaattgtcaggattattgattacagagactaatttttaaatgacgcctaattgtaaggacgaaacacat 8342596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 438 - 565
Target Start/End: Complemental strand, 28228803 - 28228676
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    |||||||||||| |||| || |||| |||||| |||| ||||||   || |||| || ||| | | ||||| ||| ||||  ||||||||||||||||||    
T  28228803 gcagtcattaagtgggttaaggaactaaatttcaaatgattaaactttgaaagagtaatttgccacgattaacgattacagggaccaatttttaaatgac 28228704  T
Q  538 ccctaattacaaggatgaaatacatatt 565  Q
    |||||||| || ||| |||| |||||||    
T  28228703 ccctaattgcagggacgaaacacatatt 28228676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 459 - 565
Target Start/End: Original strand, 28230055 - 28230161
Alignment:
Q  459 gaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaat 558  Q
    |||||||||||||||| ||||||   || |||  || ||| | ||||||| ||| ||||  |||||||||||||||||||| |||||||| ||| ||||     
T  28230055 gaacgaaattttaaatgattaaactttgaaagggtaatttgctaggattaacgattacagggaccaatttttaaatgacccataattacagggacgaaac 28230154  T
Q  559 acatatt 565  Q
    |||||||    
T  28230155 acatatt 28230161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 499 - 548
Target Start/End: Original strand, 3229717 - 3229766
Alignment:
Q  499 acaaggattagcgaatacaaagaccaatttttaaatgacccctaattaca 548  Q
    |||||||||||||||||||| |||||| ||||||||||||| || |||||    
T  3229717 acaaggattagcgaatacaaggaccaaattttaaatgacccttatttaca 3229766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 521 - 569
Target Start/End: Complemental strand, 36755143 - 36755095
Alignment:
Q  521 accaatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    ||||||||||||| |||| ||||||| || |||||||||||||||||||    
T  36755143 accaatttttaaacgacctctaattataaagatgaaatacatatttaag 36755095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 499 - 552
Target Start/End: Original strand, 3123476 - 3123529
Alignment:
Q  499 acaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaagga 552  Q
    |||||||||||||||||||| |||||| ||| ||||||||| || || ||||||    
T  3123476 acaaggattagcgaatacaaggaccaaatttgaaatgacccttatttgcaagga 3123529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 503 - 564
Target Start/End: Complemental strand, 6846852 - 6846791
Alignment:
Q  503 ggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatat 564  Q
    |||||| ||||| ||| ||||||||||||||||||||||| || || |||| ||| ||||||    
T  6846852 ggattaacgaattcaaggaccaatttttaaatgacccctatttgcagggattaaacacatat 6846791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 105; Significance: 5e-52; HSPs: 101)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 389 - 569
Target Start/End: Complemental strand, 33808505 - 33808325
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |  ||||  |||||  ||||||| | |||||||||||||| |||||||||||||    
T  33808505 gagggtatttttgtccattcccatcccattttgctaatttgatgacggggcagcgattaactgggtcaatggacgaaattttaaatgattaaagaatgca 33808406  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    |||||| ||| |||||||||||||||||| ||||||||||||||| ||| | ||||| |||| ||||||||||||||||||    
T  33808405 agactaatttgcaaggattagcgaatacagagaccaatttttaaacgacgcgtaatttcaagaatgaaatacatatttaag 33808325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 388 - 565
Target Start/End: Original strand, 18087583 - 18087760
Alignment:
Q  388 tgagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgc 487  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| |||| || | || ||||||||||| |||||  | |||    
T  18087583 tgagggtatttttgtccattcccatgccattttgctaatttgatgacgtggcagtcattaagtgggttaagggacaaaattttaaatgattaataattgc 18087682  T
Q  488 aagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatt 565  Q
    ||| ||| ||| ||||||||||||| ||||  |||||||||||||||||||||||||| ||||||  ||| |||||||    
T  18087683 aaggctattttgcaaggattagcgattacagtgaccaatttttaaatgacccctaattgcaaggactaaacacatatt 18087760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 389 - 550
Target Start/End: Complemental strand, 25628660 - 25628499
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||  |||||||| |||||||||||||| |||||| ||||||    
T  25628660 gagggtatttttgtccattcccatgccattttgctaatttgatgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaatgca 25628561  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaag 550  Q
    ||  ||  || | ||||||| ||| ||||| ||| |||||||||||||| ||||||| ||||    
T  25628560 agggtaaattgccaggattatcgattacaatgactaatttttaaatgacgcctaattgcaag 25628499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 438 - 569
Target Start/End: Complemental strand, 27396762 - 27396631
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  |||||||  | |||||||||||| ||||| || |||||||||||||| ||||||||||||||||||  |||||||||||||| | |    
T  27396762 gcagtgattaagttggtcaaatgatgaaattttaaatgattaatgattgcaagactagtttgcaaggattagcgaatacatggaccaatttttaaacggc 27396663  T
Q  538 ccctaattacaaggatgaaatacatatttaag 569  Q
    ||||||||||||||||||||||||||||||||    
T  27396662 ccctaattacaaggatgaaatacatatttaag 27396631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 439 - 569
Target Start/End: Original strand, 6253736 - 6253866
Alignment:
Q  439 cagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacc 538  Q
    |||| ||||||  |||||||| || ||||||||||| ||||| || ||||||||| |||| ||||||||||||||||||| |||||||||||||| ||||    
T  6253736 cagtgattaagttggtcaaaggactaaattttaaatgattaatgattgcaagacttgtttgcaaggattagcgaatacaaggaccaatttttaaacgacc 6253835  T
Q  539 cctaattacaaggatgaaatacatatttaag 569  Q
    ||||||| ||||||| |||||||||||||||    
T  6253836 cctaattgcaaggatcaaatacatatttaag 6253866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 455 - 569
Target Start/End: Original strand, 10936106 - 10936220
Alignment:
Q  455 caaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatg 554  Q
    ||||| |||||||||||||| ||||| || |||||| ||||||| ||||||||||||||||||| ||||||||||||||  |||||||||| ||||||||    
T  10936106 caaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacaaggaccaatttttaaacaacccctaattgcaaggatg 10936205  T
Q  555 aaatacatatttaag 569  Q
    |||||||||||||||    
T  10936206 aaatacatatttaag 10936220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 452 - 569
Target Start/End: Complemental strand, 28469129 - 28469012
Alignment:
Q  452 ggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaagg 551  Q
    |||||||| |||||||||||||| ||||| || |||||| ||||||| ||| |||||||||||| || |||||||||||||| ||||||||||| |||||    
T  28469129 ggtcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaagattagcgaatataaggaccaatttttaaacgacccctaattgcaagg 28469030  T
Q  552 atgaaatacatatttaag 569  Q
    ||||||||||||||||||    
T  28469029 atgaaatacatatttaag 28469012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 389 - 562
Target Start/End: Complemental strand, 32068278 - 32068105
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    |||||||||||||||| ||||||||||||||||||||||||||||  | ||| | ||||||  |||||||| |||||||||||||| |||||| ||||||    
T  32068278 gagggtatttttgtcctttcccatgccattttgctaatttgatgacttggcattgattaagttggtcaaagtacgaaattttaaatgattaaacaatgca 32068179  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    ||  ||  || | ||||||||||| ||||| ||| ||||||||||||||  |||||| |||||| |||| ||||    
T  32068178 agggtaaattgccaggattagcgattacaaggactaatttttaaatgacgtctaattgcaaggacgaaacacat 32068105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 389 - 562
Target Start/End: Complemental strand, 32934530 - 32934357
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    ||||||||||||||||||||| |||||||||||||||||||||||  | | ||| ||||||  |||||||| |||||||||||||| |||||| ||||||    
T  32934530 gagggtatttttgtccattcctatgccattttgctaatttgatgacttggtagtgattaagttggtcaaaggacgaaattttaaatgattaaacaatgca 32934431  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    ||  ||  ||   ||||||||||| ||||  ||| |||||||||||||| ||||||| ||||||||||| ||||    
T  32934430 agggtaaattgtcaggattagcgattacagcgactaatttttaaatgacacctaattgcaaggatgaaacacat 32934357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 389 - 562
Target Start/End: Original strand, 42618155 - 42618328
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    |||| |||||||||||||||||||||||||||||||||||||||| ||  |||| ||||||  |||||||| |||||||||||||| |||||| ||||||    
T  42618155 gaggatatttttgtccattcccatgccattttgctaatttgatgacgtgacagtgattaagttggtcaaaggacgaaattttaaatgattaaacaatgca 42618254  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    ||  ||  || | ||||||||||| ||||   || |||||||||||||| ||||||| |||||| |||| ||||    
T  42618255 agggtaaattgccaggattagcgattacaggaactaatttttaaatgacgcctaattgcaaggacgaaacacat 42618328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 438 - 569
Target Start/End: Complemental strand, 2640311 - 2640180
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  |||||||| |||||||||||||| ||||| || |||||||||| ||| ||||||||||||||||||   ||||||||||||| |||    
T  2640311 gcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaagactaatttgcaaggattagcgaatacaggtaccaatttttaaacgac 2640212  T
Q  538 ccctaattacaaggatgaaatacatatttaag 569  Q
    ||||||||  ||||||||||||||||||||||    
T  2640211 ccctaattgtaaggatgaaatacatatttaag 2640180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 438 - 569
Target Start/End: Original strand, 24389080 - 24389211
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  |||||||| || ||||||||||| ||||| || |||||  ||||||| ||||||||||||||||||  |||||||||||||| |||    
T  24389080 gcagtgattaagttggtcaaaggacaaaattttaaatgattaatgattgcaatgctagtttgcaaggattagcgaatacatggaccaatttttaaacgac 24389179  T
Q  538 ccctaattacaaggatgaaatacatatttaag 569  Q
    |||||||| |||||||||||||||||||||||    
T  24389180 ccctaattgcaaggatgaaatacatatttaag 24389211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 438 - 568
Target Start/End: Original strand, 27992003 - 27992133
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  |||||||| || ||||||||||| ||||| || |||||| ||||||| ||||||||||||||||||  |||||||||||||| |||    
T  27992003 gcagtgattaagttggtcaaaggactaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacagggaccaatttttaaacgac 27992102  T
Q  538 ccctaattacaaggatgaaatacatatttaa 568  Q
    |||||||| ||||||| ||||||||||||||    
T  27992103 ccctaattgcaaggatcaaatacatatttaa 27992133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 435 - 569
Target Start/End: Complemental strand, 42019733 - 42019599
Alignment:
Q  435 gtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaat 534  Q
    |||||||| |||||   ||||||||||||||||||||||| ||||| || | |||  ||||||| ||||||||||||||||||  ||||||||||||||     
T  42019733 gtagcagtgattaatttggtcaaagaacgaaattttaaatgattaatgattacaaagctagtttgcaaggattagcgaatacatggaccaatttttaaac 42019634  T
Q  535 gacccctaattacaaggatgaaatacatatttaag 569  Q
    ||||| ||||| |||||||||||||||||||||||    
T  42019633 gacccttaattgcaaggatgaaatacatatttaag 42019599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 451 - 569
Target Start/End: Complemental strand, 42362570 - 42362452
Alignment:
Q  451 gggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaag 550  Q
    |||| |||| |||||||||||||| |||||||||||||||  || ||| ||||||||| ||||||||| |||||||||||||| ||| ||||||| ||||    
T  42362570 gggttaaaggacgaaattttaaatgattaaagaatgcaagggtaatttgcaaggattaacgaatacaaggaccaatttttaaacgacacctaattgcaag 42362471  T
Q  551 gatgaaatacatatttaag 569  Q
    |||||||||||||||||||    
T  42362470 gatgaaatacatatttaag 42362452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 388 - 566
Target Start/End: Complemental strand, 47945531 - 47945362
Alignment:
Q  388 tgagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgc 487  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||| || ||||||||| |         |||||||||||||| ||||| || |||    
T  47945531 tgagggtatttttgtccattcctatgccattttgttaatttgatgatgtggcggtcattaagtg---------acgaaattttaaatgattaatgattgc 47945441  T
Q  488 aagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatattt 566  Q
    ||  ||||||| ||||||||||||||||||   ||||||||||||| || ||| |||| ||| ||||||||||||||||    
T  47945440 aatgctagtttgcaaggattagcgaatacatgaaccaatttttaaacgatccccaattgcaacgatgaaatacatattt 47945362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 388 - 566
Target Start/End: Complemental strand, 47950961 - 47950792
Alignment:
Q  388 tgagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgc 487  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||| || ||||||||| |         |||||||||||||| ||||| || |||    
T  47950961 tgagggtatttttgtccattcctatgccattttgttaatttgatgatgtggcggtcattaagtg---------acgaaattttaaatgattaatgattgc 47950871  T
Q  488 aagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatattt 566  Q
    ||  ||||||| ||||||||||||||||||   ||||||||||||| || ||| |||| ||| ||||||||||||||||    
T  47950870 aatgctagtttgcaaggattagcgaatacatgaaccaatttttaaacgatccccaattgcaacgatgaaatacatattt 47950792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 389 - 562
Target Start/End: Original strand, 25453372 - 25453545
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    |||| |||||||||||||||||||||||||||||||||||||||| || || || ||||||| |||||||| ||||||| |||||| |||||| ||||||    
T  25453372 gaggatatttttgtccattcccatgccattttgctaatttgatgacgtggcggtgattaagctggtcaaaggacgaaatgttaaatgattaaacaatgca 25453471  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    ||  ||  || | ||||||||||| | ||  ||| |||||||||||||| | ||||||||| || |||| ||||    
T  25453472 agggtaaattgctaggattagcgatttcagggactaatttttaaatgacgcttaattacaaagacgaaacacat 25453545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 391 - 539
Target Start/End: Original strand, 43124400 - 43124548
Alignment:
Q  391 gggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaag 490  Q
    ||||||||||||||||||||||| ||||||||||||||||||| || ||||| |||||  |||   | | |||||||||||||| |||||| ||||||||    
T  43124400 gggtatttttgtccattcccatgtcattttgctaatttgatgacgtggcagtgattaactgggaatagggacgaaattttaaatgattaaacaatgcaag 43124499  T
Q  491 actagtttacaaggattagcgaatacaaagaccaatttttaaatgaccc 539  Q
      ||||||  |||||||||||| ||||  ||||||||||||||||||||    
T  43124500 ggtagtttgtaaggattagcgattacagggaccaatttttaaatgaccc 43124548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 438 - 569
Target Start/End: Original strand, 17102284 - 17102415
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  |||||||| || ||||||||||| ||||| || |||||| ||||||| | ||||||||||||||||  |||||||||||||| |||    
T  17102284 gcagtgattaagttggtcaaaggactaaattttaaatgattaatgattgcaaggctagtttgctaggattagcgaatacatggaccaatttttaaacgac 17102383  T
Q  538 ccctaattacaaggatgaaatacatatttaag 569  Q
    |||||||| ||||||| |||||||||||||||    
T  17102384 ccctaattgcaaggatcaaatacatatttaag 17102415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 389 - 552
Target Start/End: Original strand, 25628722 - 25628885
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    ||||||| |||||||||||||||||||||||||||||||||||||  |  |||| ||||||  |||||||| |||||||||||||| |||||| ||||||    
T  25628722 gagggtagttttgtccattcccatgccattttgctaatttgatgacttgacagtgattaagttggtcaaaggacgaaattttaaatgattaaacaatgca 25628821  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaagga 552  Q
    ||  ||  ||   ||||||||||| |||| |||| |||||||||||||| | ||||| ||||||    
T  25628822 agggtaaattgtcaggattagcgattacatagactaatttttaaatgacgcataattgcaagga 25628885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 390 - 557
Target Start/End: Original strand, 33828219 - 33828386
Alignment:
Q  390 agggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaa 489  Q
    |||||||||||||||||||||||||||||||| || ||||||||| |  |||| ||||||  |||||||  |||||||||||||| |||||| |||||||    
T  33828219 agggtatttttgtccattcccatgccattttgttagtttgatgatttgacagtgattaagttggtcaaatgacgaaattttaaatgattaaacaatgcaa 33828318  T
Q  490 gactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaa 557  Q
    |  ||  ||   ||||||||||| |||| |||| |||||||||||||| ||||||| |||||| ||||    
T  33828319 gggtaaattgtcaggattagcgattacagagactaatttttaaatgacacctaattgcaaggacgaaa 33828386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 463 - 569
Target Start/End: Complemental strand, 48788911 - 48788805
Alignment:
Q  463 gaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    |||||||||||| ||||| || |||||| ||||||| ||||||||||||||||||  |||||||||||||| ||||||||||| |||| |||||||||||    
T  48788911 gaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacagggaccaatttttaaacgacccctaattgcaagaatgaaatacat 48788812  T
Q  563 atttaag 569  Q
    |||||||    
T  48788811 atttaag 48788805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 389 - 562
Target Start/End: Original strand, 10600193 - 10600366
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |  |||| ||||||  |||||||| || ||||||| ||| |||||| ||||||    
T  10600193 gagggtatttttgtccattcccatgccattttgctaatttgatgacatgacagtgattaagttggtcaaaggacaaaattttgaatgattaaacaatgca 10600292  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    ||  ||  ||   ||||||||||| ||||| ||| |||||||||||||| ||||||| ||| || |||| ||||    
T  10600293 agggtaaattgtcaggattagcgattacaaggactaatttttaaatgacgcctaattgcaatgacgaaacacat 10600366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 389 - 562
Target Start/End: Complemental strand, 28890761 - 28890588
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    |||||||||||||||||||  |||||||||||||||||||||||| ||  |||| ||||||   ||||||  |||||||||||||| |||||| ||||||    
T  28890761 gagggtatttttgtccattttcatgccattttgctaatttgatgacgtgacagtgattaagttagtcaaaagacgaaattttaaatgattaaacaatgca 28890662  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    ||  ||  || | ||||||||||| ||||| ||| ||||||||||||||  |||||| |||||| |||| ||||    
T  28890661 agggtaaattgctaggattagcgattacaaggactaatttttaaatgacgtctaattgcaaggacgaaacacat 28890588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 389 - 562
Target Start/End: Original strand, 32068340 - 32068513
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    |||||| |||||||| ||||||||||||||||||||||||||||| || ||||| ||||||  |||||||  |||||||||||||| |||||| ||||||    
T  32068340 gagggtctttttgtcaattcccatgccattttgctaatttgatgacgtggcagtgattaagttggtcaaatgacgaaattttaaatgattaaacaatgca 32068439  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    ||  ||  ||   ||||||||||| ||||  ||  |||||||||||||| ||||||| |||||| |||| ||||    
T  32068440 agggtaaattggcaggattagcgattacagggattaatttttaaatgactcctaattgcaaggacgaaacacat 32068513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 388 - 565
Target Start/End: Complemental strand, 32687580 - 32687403
Alignment:
Q  388 tgagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgc 487  Q
    |||| ||||||| |||||||||||||| |||||||||||||||||| || ||||||||| |  ||||||| |||||||||||||||| |||||    |||    
T  32687580 tgagtgtattttggtccattcccatgcaattttgctaatttgatgaagtggcagtcattgattgggtcaaggaacgaaattttaaatgattaatatttgc 32687481  T
Q  488 aagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatt 565  Q
    |||   | ||| | ||||||| ||| ||||  |||||| ||||||||||||||||||||||||||  ||| |||||||    
T  32687480 aagggcaatttgccaggattaacgattacagggaccaaattttaaatgacccctaattacaaggacaaaacacatatt 32687403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 388 - 565
Target Start/End: Original strand, 32688463 - 32688640
Alignment:
Q  388 tgagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgc 487  Q
    |||||||||||||||| ||| |||||| |||||||||||||||||| || ||||| |||||| ||||||| | |||||||||||||| |||||    |||    
T  32688463 tgagggtatttttgtctatttccatgcaattttgctaatttgatgacgtggcagttattaagtgggtcaagggacgaaattttaaatgattaatatttgc 32688562  T
Q  488 aagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatt 565  Q
    |||   | |||   ||||||||||| ||||| |||||| ||||||||||||||||||| |||||  |||| |||||||    
T  32688563 aagggcaatttgtcaggattagcgattacaaggaccaaattttaaatgacccctaattgcaagggcgaaacacatatt 32688640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 389 - 562
Target Start/End: Original strand, 32934592 - 32934765
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    ||||||||||||||||||||||||| ||||||||||||||||||  ||  |||| ||||||  |||||||  |||||||||||||| |||||| |||| |    
T  32934592 gagggtatttttgtccattcccatgtcattttgctaatttgatgtcgtgacagtgattaagttggtcaaatgacgaaattttaaatgattaaacaatgta 32934691  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    ||| ||  ||   ||||||||||| ||||  ||| |||||||||||||| ||||||| |||||| |||| ||||    
T  32934692 agagtaaattgtcaggattagcgattacagggactaatttttaaatgacgcctaattgcaaggacgaaacacat 32934765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 389 - 562
Target Start/End: Complemental strand, 42618093 - 42617920
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    |||||||||||||||||||||||||||||||||||||||||||||  | | ||| ||||||  | |||||| |||||||||||||| |||||| ||||||    
T  42618093 gagggtatttttgtccattcccatgccattttgctaatttgatgacttggtagtgattaagttgatcaaaggacgaaattttaaatgattaaacaatgca 42617994  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    ||  ||  ||   ||||||||||| || |  ||| |||||||||||||| ||||||| |||||| |||| ||||    
T  42617993 agggtaaattgtcaggattagcgattaaagggactaatttttaaatgacgcctaattgcaaggacgaaacacat 42617920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 444 - 569
Target Start/End: Original strand, 47946775 - 47946900
Alignment:
Q  444 attaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaa 543  Q
    ||||| ||| ||||||||||||||||||||||||||| || |||||||||| |||  ||||  ||||||||||| ||||| ||||||||| ||  |||||    
T  47946775 attaaccggctcaaagaacgaaattttaaataattaatgattgcaagactaatttggaagggatagcgaatacagagaccgatttttaaacgattcctaa 47946874  T
Q  544 ttacaaggatgaaatacatatttaag 569  Q
    |||||||||| |||||||||||||||    
T  47946875 ttacaaggataaaatacatatttaag 47946900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 444 - 569
Target Start/End: Original strand, 47952205 - 47952330
Alignment:
Q  444 attaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaa 543  Q
    ||||| ||| ||||||||||||||||||||||||||| || |||||||||| |||  ||||  ||||||||||| ||||| ||||||||| ||  |||||    
T  47952205 attaaccggctcaaagaacgaaattttaaataattaatgattgcaagactaatttggaagggatagcgaatacagagaccgatttttaaacgattcctaa 47952304  T
Q  544 ttacaaggatgaaatacatatttaag 569  Q
    |||||||||| |||||||||||||||    
T  47952305 ttacaaggataaaatacatatttaag 47952330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 389 - 565
Target Start/End: Complemental strand, 18086471 - 18086295
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    ||||||||||||||||||| |||||||||||||||||||||||||  | ||||| |||||  ||||||| | |||||||||||| | |||||  | ||||    
T  18086471 gagggtatttttgtccatttccatgccattttgctaatttgatgacatggcagtaattaactgggtcaagggacgaaattttaagtgattaataattgca 18086372  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatt 565  Q
    || ||| ||| ||||||||| ||  ||||  |||||||||||||| ||| ||||||| ||||||  ||| |||||||    
T  18086371 aggctaatttgcaaggattatcgtttacagggaccaatttttaaacgactcctaattgcaaggactaaacacatatt 18086295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 390 - 562
Target Start/End: Original strand, 23058674 - 23058846
Alignment:
Q  390 agggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaa 489  Q
    |||||||||||||||||||||||||||||||| ||||||||||| || ||||| ||||||  |||||||  |||||||||||||| |||||| ||||| |    
T  23058674 agggtatttttgtccattcccatgccattttgttaatttgatgacgtggcagtaattaagttggtcaaatgacgaaattttaaatgattaaacaatgcga 23058773  T
Q  490 gactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    |  ||  || | ||||||| ||| ||||| ||  |||||||||||||| || |||| |||||| |||| ||||    
T  23058774 gggtaaattgccaggattaacgattacaaggattaatttttaaatgacgccgaattgcaaggacgaaacacat 23058846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 461 - 569
Target Start/End: Original strand, 40380002 - 40380110
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| ||||| || |||||| ||||||| |||||||| |||||||||  |||||||||||||| ||| ||||||| ||||||||||||||    
T  40380002 acgaaattttaaatgattaatgattgcaaggctagtttgcaaggattggcgaatacatggaccaatttttaaacgactcctaattgcaaggatgaaatac 40380101  T
Q  561 atatttaag 569  Q
    |||||||||    
T  40380102 atatttaag 40380110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 391 - 545
Target Start/End: Original strand, 18855902 - 18856056
Alignment:
Q  391 gggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaag 490  Q
    |||||||||||||| ||||||||| |||||||||||||||||| ||  ||||||||||| |||| || | |||||||||||||| ||||||   ||||||    
T  18855902 gggtatttttgtcctttcccatgctattttgctaatttgatgacgtgtcagtcattaagtgggttaagggacgaaattttaaatgattaaactttgcaag 18856001  T
Q  491 actagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaatt 545  Q
      || ||| | | ||||| ||| ||||  ||||||||||||||||||||||||||    
T  18856002 ggtaatttgccaagattaacgattacagggaccaatttttaaatgacccctaatt 18856056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 392 - 562
Target Start/End: Complemental strand, 25453307 - 25453137
Alignment:
Q  392 ggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaaga 491  Q
    |||||||||||||||||||||||| |||||||||||||||||  | | ||| ||||||  |||||||| |||||||||||||| |||||| ||||||||     
T  25453307 ggtatttttgtccattcccatgcctttttgctaatttgatgacttggtagtgattaagttggtcaaaggacgaaattttaaatgattaaataatgcaagg 25453208  T
Q  492 ctagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
     ||  ||   ||||||||||| || |  ||| |||||||||||||| ||||||| |||||| |||| ||||    
T  25453207 gtaaattgtcaggattagcgattatagggactaatttttaaatgacgcctaattgcaaggacgaaacacat 25453137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 461 - 566
Target Start/End: Complemental strand, 40379879 - 40379774
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| ||| |||   ||  || |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  40379879 acgaaattttaaatgattaaacaatacaaaggtaaattgcaaggattagcgaatacaaagaccaatttttaaacgacccctaattgcaaggatgaaatac 40379780  T
Q  561 atattt 566  Q
    ||||||    
T  40379779 atattt 40379774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 393 - 562
Target Start/End: Original strand, 43266514 - 43266683
Alignment:
Q  393 gtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagac 492  Q
    |||||||||||||||| |||| |||||||||||||||||||  ||| ||| ||||||  |||||||| |||||||||||||| |||||| ||||||||      
T  43266514 gtatttttgtccattctcatgtcattttgctaatttgatgacttagtagtgattaagttggtcaaaggacgaaattttaaatgattaaacaatgcaaggg 43266613  T
Q  493 tagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    ||  ||   || |||||||| ||||  ||| |||||||||||||| ||||||| |||||| |||| ||||    
T  43266614 taaattgtcagaattagcgattacatggactaatttttaaatgacgcctaattgcaaggacgaaacacat 43266683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 388 - 544
Target Start/End: Complemental strand, 5456010 - 5455854
Alignment:
Q  388 tgagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgc 487  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||| ||||  | | | |||||||||||| ||||||   ||     
T  5456010 tgagggtatttttgtccattctcatgccattttgctaatttgatgatgtggcagtaattaagtgggtgtagggatgaaattttaaatgattaaactttga 5455911  T
Q  488 aagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaat 544  Q
    |||   | | | |||||||||| |||||||  |||||||||||||| ||||||||||    
T  5455910 aaggacaatatgcaaggattagagaatacagggaccaatttttaaacgacccctaat 5455854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 461 - 569
Target Start/End: Original strand, 5457225 - 5457333
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| | || |||  || ||| ||||||||| ||||||||| |||||||||||||| ||||||||||| ||||||||||||||    
T  5457225 acgaaattttaaatgattaaacattgaaagggtaatttgcaaggattaacgaatacaaggaccaatttttaaacgacccctaattgcaaggatgaaatac 5457324  T
Q  561 atatttaag 569  Q
    |||||||||    
T  5457325 atatttaag 5457333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 461 - 569
Target Start/End: Original strand, 45010922 - 45011030
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| ||||||||  ||  || ||||||||||||||||||   ||||||||||||| ||||||||||| ||||||||||||||    
T  45010922 acgaaattttaaatgattaaacaatgcaagggtaaattgcaaggattagcgaatacatgaaccaatttttaaacgacccctaattgcaaggatgaaatac 45011021  T
Q  561 atatttaag 569  Q
    |||||||||    
T  45011022 atatttaag 45011030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 438 - 569
Target Start/End: Original strand, 13386042 - 13386173
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| |||||  ||||||||| |  ||||||||||| |||||| | |||||| ||||||| |||||||||||||||| |  |||||||||||||| |||    
T  13386042 gcagtgattaactgggtcaaaggataaaattttaaatgattaaacattgcaaggctagtttgcaaggattagcgaatatagggaccaatttttaaacgac 13386141  T
Q  538 ccctaattacaaggatgaaatacatatttaag 569  Q
    |||||||| |||| || |||||||||||||||    
T  13386142 ccctaattgcaagtattaaatacatatttaag 13386173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 438 - 569
Target Start/End: Original strand, 17886785 - 17886916
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| |||||| ||||||| | |||||||||||||| |||||    ||||||  |||||| ||||||||| ||||||||  || ||||||||||||||     
T  17886785 gcagtgattaagtgggtcaagggacgaaattttaaatgattaatatttgcaagggtagtttgcaaggattaacgaatacatggatcaatttttaaatgat 17886884  T
Q  538 ccctaattacaaggatgaaatacatatttaag 569  Q
    |||||||| |||||||||||||||||||||||    
T  17886885 ccctaattgcaaggatgaaatacatatttaag 17886916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 438 - 569
Target Start/End: Original strand, 42731714 - 42731845
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  |||||||| |||||||||||||| |||||  | |||||  |||| || |||||||||||| ||| |  || ||||||||||| |||    
T  42731714 gcagtgattaagttggtcaaaggacgaaattttaaatgattaataattgcaaagctagcttgcaaggattagcggatatagggatcaatttttaaacgac 42731813  T
Q  538 ccctaattacaaggatgaaatacatatttaag 569  Q
    ||||||||||||||||||||||||||||||||    
T  42731814 ccctaattacaaggatgaaatacatatttaag 42731845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 431 - 569
Target Start/End: Complemental strand, 32053283 - 32053145
Alignment:
Q  431 tgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaattttt 530  Q
    |||||| ||||| ||||||  |||||||  | |||||||||||| ||||| || |||||| ||||||| ||||||||| || ||| |  |||| ||||||    
T  32053283 tgatgtggcagtgattaagttggtcaaaagatgaaattttaaatgattaatgattgcaaggctagtttgcaaggattatcgtatatagggaccgattttt 32053184  T
Q  531 aaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    ||| ||||| |||||||||||||||||||||||||||||    
T  32053183 aaacgacccataattacaaggatgaaatacatatttaag 32053145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 389 - 562
Target Start/End: Original strand, 27138185 - 27138358
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    |||||||||||||||||||||||||  |||||| |||||||||||  | || || ||||||  |||||||||| |||||||||||| |||||| ||||||    
T  27138185 gagggtatttttgtccattcccatgttattttgttaatttgatgacttggcggtgattaagttggtcaaagaaagaaattttaaatgattaaacaatgca 27138284  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    ||  ||  ||   ||||||||||| ||||| ||| |||||||||||||| ||| |||  ||||| |||| ||||    
T  27138285 agggtaaattgtcaggattagcgattacaaggactaatttttaaatgacgcctgattgaaaggacgaaacacat 27138358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 389 - 490
Target Start/End: Original strand, 46205553 - 46205654
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    |||||||||||||||||||||||||||||||| |||||||||||| ||   ||| ||||||  |||||||| |||||||||||||| |||||| ||||||    
T  46205553 gagggtatttttgtccattcccatgccattttcctaatttgatgacgtgatagtgattaagttggtcaaaggacgaaattttaaatgattaaacaatgca 46205652  T
Q  489 ag 490  Q
    ||    
T  46205653 ag 46205654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 388 - 480
Target Start/End: Complemental strand, 4226308 - 4226216
Alignment:
Q  388 tgagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaa 480  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||| ||||   ||| |||||||||||||| |||||    
T  4226308 tgagggtatttttgtccattcccatgccattttgctaatttgatgacgtggcagtgattaaccgggaagaaggacgaaattttaaatgattaa 4226216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 438 - 550
Target Start/End: Complemental strand, 17885761 - 17885649
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| |||||  ||||||||| |||||||||||||| ||||| || |||||| ||||||| |||||||||| |||||||  |||||||||||||| |||    
T  17885761 gcagtgattaactgggtcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagagaatacagggaccaatttttaaacgac 17885662  T
Q  538 ccctaattacaag 550  Q
    |||||||| ||||    
T  17885661 ccctaattgcaag 17885649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 485 - 569
Target Start/End: Complemental strand, 32298863 - 32298779
Alignment:
Q  485 tgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    |||||||||||||| ||||||||||||||||||  ||||| |||||||| ||||||||||| ||||||| |||||||||||||||    
T  32298863 tgcaagactagtttgcaaggattagcgaatacagggaccagtttttaaacgacccctaattgcaaggatcaaatacatatttaag 32298779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 463 - 569
Target Start/End: Original strand, 22871597 - 22871703
Alignment:
Q  463 gaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    |||||||||||| |||||| ||||||||  ||  || ||||||||||| | ||||  |||||||||||||||||||||||||| ||||||| ||||||||    
T  22871597 gaaattttaaatgattaaacaatgcaagggtaaattgcaaggattagctattacagggaccaatttttaaatgacccctaattgcaaggatcaaatacat 22871696  T
Q  563 atttaag 569  Q
    |||||||    
T  22871697 atttaag 22871703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 388 - 481
Target Start/End: Complemental strand, 12228568 - 12228475
Alignment:
Q  388 tgagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaa 481  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||| ||  ||||||||||| |||| |||  |||||||||||||| ||||||    
T  12228568 tgagggtatttttgtccattctcatgccattttgttaatttgatgacgtgacagtcattaagtgggttaaacgacgaaattttaaatgattaaa 12228475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 389 - 490
Target Start/End: Complemental strand, 22081741 - 22081640
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    |||||||||||||||||||| |||||||||| |||||||||||||  | ||||| ||||||  | |||||| |||||||||||||| |||||| ||||||    
T  22081741 gagggtatttttgtccattctcatgccatttcgctaatttgatgacttggcagtgattaagttgatcaaaggacgaaattttaaatgattaaacaatgca 22081642  T
Q  489 ag 490  Q
    ||    
T  22081641 ag 22081640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 396 - 552
Target Start/End: Complemental strand, 39275045 - 39274889
Alignment:
Q  396 tttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaa-gaacgaaattttaaataattaaagaatgcaagacta 494  Q
    ||||||||||||| |||||||||| ||||||||||||| || ||||| ||||||  ||||||| | |||||||||||||| |||||| |||||||   ||    
T  39275045 tttttgtccattctcatgccattt-gctaatttgatgacgtggcagtgattaagttggtcaaaaggacgaaattttaaatgattaaacaatgcaaaggta 39274947  T
Q  495 gtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaagga 552  Q
      |||| ||||||||||| |||| |||| ||||||||||| || || |||| ||||||    
T  39274946 aattactaggattagcgattacagagactaatttttaaataacgccaaattgcaagga 39274889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 389 - 562
Target Start/End: Complemental strand, 43266448 - 43266275
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    |||||||||||||| ||||||||| |||||||| ||||||||||| ||  |||| ||||||  |||||||  | |||||||||||| |||||| ||||||    
T  43266448 gagggtatttttgttcattcccataccattttgttaatttgatgacgtgacagtgattaagttggtcaaatgatgaaattttaaatgattaaacaatgca 43266349  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    ||  ||  ||   ||||||| ||| ||||  ||| |||||||||||||| ||||||| |||||| |||| ||||    
T  43266348 agggtaaattgtcaggattaacgattacatggactaatttttaaatgacgcctaattgcaaggacgaaacacat 43266275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 393 - 562
Target Start/End: Complemental strand, 46204599 - 46204430
Alignment:
Q  393 gtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagac 492  Q
    |||||||||| ||||||||||||||||| ||||||||||||  ||||||| ||||||  |||||| | |||||||||||||| || ||| |||||||       
T  46204599 gtatttttgttcattcccatgccattttactaatttgatgacttagcagtgattaagttggtcaatggacgaaattttaaatgataaaataatgcaatgg 46204500  T
Q  493 tagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    ||  ||   ||| ||||||| ||||  ||| |||||||||||||| ||||||| |||||| |||| ||||    
T  46204499 taaattgtcaggtttagcgattacagggactaatttttaaatgacgcctaattgcaaggacgaaacacat 46204430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 461 - 569
Target Start/End: Complemental strand, 10935904 - 10935796
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| ||||||||  ||  || | ||||||||||| ||||  |||||||||||||| ||||||||||| ||||||||||||||    
T  10935904 acgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcgattacagggaccaatttttaaacgacccctaattgcaaggatgaaatac 10935805  T
Q  561 atatttaag 569  Q
    | |||||||    
T  10935804 acatttaag 10935796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 397 - 557
Target Start/End: Original strand, 22081811 - 22081971
Alignment:
Q  397 ttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagt 496  Q
    |||||||||||||||| |||||| |||||||||||||  | ||| | ||||||  |||||||  |||||||||||||| |||||| ||||||||  ||      
T  22081811 ttttgtccattcccataccatttggctaatttgatgacttggcaatgattaagttggtcaaatgacgaaattttaaatgattaaacaatgcaagggtaaa 22081910  T
Q  497 ttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaa 557  Q
    || | ||||||||||| |||| | || |||||||||||||| | ||||| |||||| ||||    
T  22081911 ttgccaggattagcgattacagaaactaatttttaaatgacgcataattgcaaggacgaaa 22081971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 461 - 569
Target Start/End: Original strand, 28469326 - 28469434
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| ||||||||  ||  || | ||||||| ||| ||||  |||||||||||||| ||||||||||| ||||||||||||||    
T  28469326 acgaaattttaaatgattaaacaatgcaagggtaaattgccaggattaacgattacagggaccaatttttaaacgacccctaattgcaaggatgaaatac 28469425  T
Q  561 atatttaag 569  Q
    |||||||||    
T  28469426 atatttaag 28469434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 461 - 569
Target Start/End: Complemental strand, 42731529 - 42731421
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| |||||| |  ||  || | ||||||||||| ||||| |||||||||||||| ||||||||||| ||||||||| ||||    
T  42731529 acgaaattttaaatgattaaacaatgcaggggtaaattgccaggattagcgattacaaggaccaatttttaaacgacccctaattgcaaggatgagatac 42731430  T
Q  561 atatttaag 569  Q
    |||||||||    
T  42731429 atatttaag 42731421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 461 - 568
Target Start/End: Complemental strand, 37656962 - 37656855
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||||| |||| ||||||||  ||  || | ||||||||||| |||| ||||||||||||||| ||  ||||||| ||||||||||||||    
T  37656962 acgaaattttaaataaataaacaatgcaagcgtaaattgcgaggattagcgattacagagaccaatttttaaacgattcctaattgcaaggatgaaatac 37656863  T
Q  561 atatttaa 568  Q
    ||||||||    
T  37656862 atatttaa 37656855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 504 - 570
Target Start/End: Complemental strand, 24388886 - 24388820
Alignment:
Q  504 gattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaagt 570  Q
    |||||||||||||| ||||||||||||||| ||||| ||||| ||||||||||||||||||||||||    
T  24388886 gattagcgaatacagagaccaatttttaaacgacccataattgcaaggatgaaatacatatttaagt 24388820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 388 - 557
Target Start/End: Complemental strand, 13384685 - 13384516
Alignment:
Q  388 tgagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgc 487  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||  | | ||| |||||| | ||  | | |||||||||||||| ||||| |  |||    
T  13384685 tgagggtatttttgtccattcccatgtcattttgttaatttgatgacatgggagtaattaagtgagtgtagggacgaaattttaaatgattaacgtttgc 13384586  T
Q  488 aagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaa 557  Q
    |||  |||||| | ||||||||||| ||||  |||||| ||||||  ||||| ||||| || ||||||||    
T  13384585 aagggtagtttgctaggattagcgattacagggaccaaattttaagcgacccttaattgcagggatgaaa 13384516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 461 - 569
Target Start/End: Complemental strand, 6253581 - 6253473
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| |||||| |  ||  || | ||||||||||| ||||  |||||||||||||| ||||||||||| ||||||| ||||||    
T  6253581 acgaaattttaaatgattaaacaatgcaggggtaaattgccaggattagcgattacagggaccaatttttaaacgacccctaattgcaaggatcaaatac 6253482  T
Q  561 atatttaag 569  Q
    |||||||||    
T  6253481 atatttaag 6253473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 461 - 569
Target Start/End: Complemental strand, 17102130 - 17102022
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| |||||| |  ||  || | ||||||||||| ||||  |||||||||||||| ||||||||||| ||||||| ||||||    
T  17102130 acgaaattttaaatgattaaacaatgcaggggtaaattgccaggattagcgattacagggaccaatttttaaacgacccctaattgcaaggatcaaatac 17102031  T
Q  561 atatttaag 569  Q
    |||||||||    
T  17102030 atatttaag 17102022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 388 - 480
Target Start/End: Complemental strand, 45914707 - 45914615
Alignment:
Q  388 tgagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaa 480  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| || ||||| ||||| ||||   | | |||||||||||||| |||||    
T  45914707 tgagggtatttttgtccattcccatgtcattttgctaatttgatgacgtggcagtgattaatcgggaagagggacgaaattttaaatgattaa 45914615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 502 - 569
Target Start/End: Original strand, 27396954 - 27397021
Alignment:
Q  502 aggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    ||||||||||| ||||  |||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  27396954 aggattagcgattacagggaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaag 27397021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 461 - 568
Target Start/End: Original strand, 42019915 - 42020022
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    ||||||||||||||||||||| ||||||||| ||  || | | ||||||||| || |   |||||||||||||  |||||||||| ||||||||||||||    
T  42019915 acgaaattttaaataattaaacaatgcaagagtaaattgccaagattagcgattataggaaccaatttttaaacaacccctaattgcaaggatgaaatac 42020014  T
Q  561 atatttaa 568  Q
    ||||||||    
T  42020015 atatttaa 42020022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 461 - 563
Target Start/End: Original strand, 2640496 - 2640598
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| ||||||||  ||  || | || |||||||| |||| || |||||||||||| |||||||||||| |||||||||||||    
T  2640496 acgaaattttaaatgattaaacaatgcaagggtaaattgccagaattagcgattacagaggccaatttttaaacgacccctaattataaggatgaaatac 2640595  T
Q  561 ata 563  Q
    |||    
T  2640596 ata 2640598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 376 - 474
Target Start/End: Complemental strand, 12643295 - 12643197
Alignment:
Q  376 agaagattaatttgagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaat 474  Q
    ||||||| |||||||||||||||||||||||||| ||||||||  ||||||||||||| || ||||| ||||| ||||   | | ||||||||||||||    
T  12643295 agaagatgaatttgagggtatttttgtccattcctatgccattaagctaatttgatgacgtggcagtgattaatcgggaagagggacgaaattttaaat 12643197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 463 - 569
Target Start/End: Original strand, 19204778 - 19204884
Alignment:
Q  463 gaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    |||||||||||||||||| || |||||  ||||||| ||||||||||||| ||||   |||||||||||||  ||||||||||  |||||| |||| |||    
T  19204778 gaaattttaaataattaatgattgcaaagctagtttgcaaggattagcgattacatgaaccaatttttaaaccacccctaattgtaaggatcaaattcat 19204877  T
Q  563 atttaag 569  Q
    |||||||    
T  19204878 atttaag 19204884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 388 - 562
Target Start/End: Complemental strand, 23058612 - 23058438
Alignment:
Q  388 tgagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgc 487  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||  | |  |  ||||||  |||||||| |||||||||||||| |||||| |||||    
T  23058612 tgagtgtatttttgtccattcccatgacattttgctaatttgatgacttggtggcgattaagttggtcaaaggacgaaattttaaatgattaaacaatgc 23058513  T
Q  488 aagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    ||   ||  || | ||||||||  | ||||  ||| |||||||||||||| | ||||| |||||| |||| ||||    
T  23058512 aatggtatattgccaggattagtaattacagggactaatttttaaatgactcttaattgcaaggacgaaacacat 23058438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 461 - 569
Target Start/End: Original strand, 23181312 - 23181420
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| ||||||||  ||  || | | ||||||||| ||||  ||||||| |||||| ||||||||||| ||| ||||||||||    
T  23181312 acgaaattttaaatgattaaacaatgcaagggtaaattgccaagattagcgattacatggaccaatatttaaacgacccctaattgcaatgatgaaatac 23181411  T
Q  561 atatttaag 569  Q
    |||||||||    
T  23181412 atatttaag 23181420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 461 - 569
Target Start/End: Original strand, 32299023 - 32299131
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||| ||| |||||| ||||||||  ||  || | ||||||||||| ||||  |||||||||||||| ||| ||||||| ||||||| ||||||    
T  32299023 acgaaattttcaatgattaaacaatgcaagggtaaattgccaggattagcgattacagggaccaatttttaaacgactcctaattgcaaggatcaaatac 32299122  T
Q  561 atatttaag 569  Q
    |||||||||    
T  32299123 atatttaag 32299131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 493 - 569
Target Start/End: Complemental strand, 43123253 - 43123177
Alignment:
Q  493 tagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    |||||| |||||||||| |||||||  |||||||||||||| ||||||||||| || ||| ||||||||||||||||    
T  43123253 tagtttgcaaggattagtgaatacagggaccaatttttaaacgacccctaattgcagggacgaaatacatatttaag 43123177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 502 - 569
Target Start/End: Original strand, 20426689 - 20426756
Alignment:
Q  502 aggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    ||||||||||||||||  |||||||||||||| |||| |||||| || ||||||||||||||||||||    
T  20426689 aggattagcgaatacagggaccaatttttaaacgacctctaattgcagggatgaaatacatatttaag 20426756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 438 - 569
Target Start/End: Original strand, 3914433 - 3914559
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  |||||||  | |||||||||||| ||||| || |||||| ||||||| ||||||||||||||||||  |||||| ||||||| |||    
T  3914433 gcagtgattaagttggtcaaatgatgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacagggaccaa-ttttaaacgac 3914531  T
Q  538 ccctaattacaaggatgaaatacatatttaag 569  Q
    | ||||||    | ||||||||||||||||||    
T  3914532 ctctaatt----gcatgaaatacatatttaag 3914559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 504 - 562
Target Start/End: Original strand, 22828179 - 22828237
Alignment:
Q  504 gattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    ||||| ||| ||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  22828179 gattaacgattacaaggaccaatttttaaatgacccctaattacaaggatgaaacacat 22828237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 495 - 569
Target Start/End: Complemental strand, 28105577 - 28105503
Alignment:
Q  495 gtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    |||| |||||||||| |||||||  ||| |||||||||| ||||| ||||| |||||||||||||||||||||||    
T  28105577 gttttcaaggattagtgaatacagggacaaatttttaaacgacccttaattgcaaggatgaaatacatatttaag 28105503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 464 - 569
Target Start/End: Complemental strand, 6571120 - 6571015
Alignment:
Q  464 aaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacata 563  Q
    ||||||||||| |||||| ||||||||  ||  ||   ||||||| ||| ||||  |||||||||||||| ||||||||||| ||||||| |||||||||    
T  6571120 aaattttaaatgattaaacaatgcaagggtaaattgtcaggattaacgattacagggaccaatttttaaacgacccctaattgcaaggatcaaatacata 6571021  T
Q  564 tttaag 569  Q
    ||||||    
T  6571020 tttaag 6571015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 500 - 569
Target Start/End: Original strand, 18670220 - 18670289
Alignment:
Q  500 caaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    ||||||||| ||||||||  ||||| |||||||| ||||||||||| ||||||| |||||||||||||||    
T  18670220 caaggattaacgaatacagggaccattttttaaacgacccctaattgcaaggattaaatacatatttaag 18670289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 464 - 569
Target Start/End: Complemental strand, 19204596 - 19204491
Alignment:
Q  464 aaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacata 563  Q
    ||||||||||| |||||| ||||||||  ||  || | || |||| ||| ||||  |||||||||||||| ||||||||||| ||||||| |||||||||    
T  19204596 aaattttaaatgattaaacaatgcaagggtaaattgccagaattaacgattacagggaccaatttttaaacgacccctaatttcaaggatcaaatacata 19204497  T
Q  564 tttaag 569  Q
    ||||||    
T  19204496 tttaag 19204491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 500 - 569
Target Start/End: Original strand, 37657194 - 37657263
Alignment:
Q  500 caaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    ||||||||| ||||||||  || ||||||||||| || |||||||| |||||||||||||||||||||||    
T  37657194 caaggattaacgaatacagggatcaatttttaaacgatccctaattgcaaggatgaaatacatatttaag 37657263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 392 - 448
Target Start/End: Original strand, 4227093 - 4227149
Alignment:
Q  392 ggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaa 448  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||| ||||| |||||    
T  4227093 ggtatttttgtccattctcatgccattttgctaattttatgatgtggcagtgattaa 4227149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 388 - 480
Target Start/End: Original strand, 12644050 - 12644142
Alignment:
Q  388 tgagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaa 480  Q
    |||||| |||||||| ||||| |||||||||||||||||||||||| || ||||| ||||| ||||   | | |||||||||||||| |||||    
T  12644050 tgagggcatttttgttcattctcatgccattttgctaatttgatgacgtggcagtgattaaccgggaagagggacgaaattttaaatgattaa 12644142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 391 - 447
Target Start/End: Complemental strand, 22661537 - 22661481
Alignment:
Q  391 gggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcatta 447  Q
    ||||||||||||| ||||||||||||||||||||||||||||| || ||||| ||||    
T  22661537 gggtatttttgtcaattcccatgccattttgctaatttgatgacgtggcagtgatta 22661481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 391 - 447
Target Start/End: Complemental strand, 27480167 - 27480111
Alignment:
Q  391 gggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcatta 447  Q
    ||||||||||||| ||||||||||||||||||||||||||||| || ||||| ||||    
T  27480167 gggtatttttgtcaattcccatgccattttgctaatttgatgacgtggcagtgatta 27480111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 461 - 569
Target Start/End: Complemental strand, 27991849 - 27991741
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| |||||| |  ||  || | ||||||||||| ||||  || |||||| |||| ||||||||||| ||||||| ||||||    
T  27991849 acgaaattttaaatgattaaacaatgcaggggtaaattgccaggattagcgattacagggatcaatttctaaacgacccctaattgcaaggatcaaatac 27991750  T
Q  561 atatttaag 569  Q
    |||||||||    
T  27991749 atatttaag 27991741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 391 - 433
Target Start/End: Original strand, 27480667 - 27480709
Alignment:
Q  391 gggtatttttgtccattcccatgccattttgctaatttgatga 433  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  27480667 gggtatttttgtcaattcccatgccattttgctaatttgatga 27480709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #91
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 388 - 474
Target Start/End: Complemental strand, 47558213 - 47558127
Alignment:
Q  388 tgagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaat 474  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||| ||  |||| ||||| ||||   | | ||||||||||||||    
T  47558213 tgagggtatttttatccattcccatgacattttgctaatttgatgacgtgacagtgattaatcgggaagagggacgaaattttaaat 47558127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #92
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 523 - 569
Target Start/End: Original strand, 29141556 - 29141602
Alignment:
Q  523 caatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    ||||||||||| |||| |||||| |||||||||||||||||||||||    
T  29141556 caatttttaaacgacctctaattgcaaggatgaaatacatatttaag 29141602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #93
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 393 - 569
Target Start/End: Original strand, 29144232 - 29144408
Alignment:
Q  393 gtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaaga-acgaaattttaaataattaaagaatgcaaga 491  Q
    |||||||||||||||||||| | ||||||||||||||||||  |  |||| ||||| | ||  | ||| | |||||||||||| |||||| |||||||      
T  29144232 gtatttttgtccattcccatacaattttgctaatttgatgagatgacagtgattaa-ctggaaatagagatgaaattttaaatgattaaacaatgcaaag 29144330  T
Q  492 ctagtttacaaggattag-cgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
     ||  || |||||||||  ||| || |  |||||||||||||| ||||||||||| || ||| ||||||||||||||||    
T  29144331 gtaagttgcaaggattaaacgattatat-gaccaatttttaaacgacccctaattgcagggacgaaatacatatttaag 29144408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #94
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 495 - 569
Target Start/End: Original strand, 34799510 - 34799584
Alignment:
Q  495 gtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    |||| |||||||||| || | ||| |||||||||||||| |||||||| || || |||| |||||||||||||||    
T  34799510 gtttgcaaggattagtgattgcaaggaccaatttttaaacgacccctatttgcagggatcaaatacatatttaag 34799584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #95
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 452 - 517
Target Start/End: Complemental strand, 22871427 - 22871362
Alignment:
Q  452 ggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaataca 517  Q
    |||||||| |||||||||||||| |||||  | ||||||||| |||| ||||||||||||| ||||    
T  22871427 ggtcaaaggacgaaattttaaatgattaataattgcaagactggtttgcaaggattagcgattaca 22871362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #96
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 521 - 569
Target Start/End: Complemental strand, 20425528 - 20425480
Alignment:
Q  521 accaatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    |||||||||||||||| |||||||| || ||||||| ||||||||||||    
T  20425528 accaatttttaaatgatccctaattgcagggatgaattacatatttaag 20425480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #97
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 439 - 511
Target Start/End: Original strand, 33809400 - 33809472
Alignment:
Q  439 cagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcg 511  Q
    ||||||||||  || |||||| | |||||||||||||||||||||||| ||||||| ||| |||  |||||||    
T  33809400 cagtcattaactggatcaaaggatgaaattttaaataattaaagaatgtaagactaatttgcaaaaattagcg 33809472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #98
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 388 - 428
Target Start/End: Original strand, 47558984 - 47559024
Alignment:
Q  388 tgagggtatttttgtccattcccatgccattttgctaattt 428  Q
    |||||||||||||||||||| ||||| ||||||||||||||    
T  47558984 tgagggtatttttgtccatttccatgtcattttgctaattt 47559024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #99
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 465 - 552
Target Start/End: Original strand, 16803967 - 16804054
Alignment:
Q  465 aattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaagga 552  Q
    |||||||||| |||||| ||||||||  ||  || | |||||| |||| ||||  |||||||||||||| ||||||||||| ||||||    
T  16803967 aattttaaatgattaaacaatgcaagggtaaattgctaggattggcgattacagggaccaatttttaaacgacccctaattgcaagga 16804054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #100
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 495 - 569
Target Start/End: Original strand, 1960227 - 1960301
Alignment:
Q  495 gtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    |||| |||||||||| |||| ||| |||||| ||||||  |||||||| || || |||| |||||||||||||||    
T  1960227 gtttgcaaggattagtgaatgcaaggaccaaattttaagcgacccctatttgcagggatcaaatacatatttaag 1960301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #101
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 495 - 569
Target Start/End: Complemental strand, 34793980 - 34793906
Alignment:
Q  495 gtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    |||| |||||||||  || | ||| |||||||||||||| |||||||| || || |||| |||||||||||||||    
T  34793980 gtttgcaaggattattgattgcaaggaccaatttttaaacgacccctatttgcagggataaaatacatatttaag 34793906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 102; Significance: 3e-50; HSPs: 104)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 376 - 569
Target Start/End: Complemental strand, 5734204 - 5734012
Alignment:
Q  376 agaagattaatttgagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaata 475  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| ||  |||| ||||| |||||  | | || |||||||||||     
T  5734204 agaagatgaatttgagggtatttttgtccattcccatgccattttgttaatttgatgacgtgacagtaattaaacgggtgcagggacaaaattttaaatg 5734105  T
Q  476 attaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    |||||| |||||||||||| ||| ||||||||||||| ||| | |||||||||||||| ||||||||||| |||||| ||||||||||||||||    
T  5734104 attaaacaatgcaagactaatttgcaaggattagcgattac-atgaccaatttttaaacgacccctaattgcaaggacgaaatacatatttaag 5734012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 389 - 557
Target Start/End: Complemental strand, 7371472 - 7371304
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||  |||||||| ||||||||||||||||||||| ||||||    
T  7371472 gagggtatttttgtccattcccatgccattttgctaatttgatgacgtggcagtgattaagttggtcaaaggacgaaattttaaataattaaacaatgca 7371373  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaa 557  Q
    ||  ||  |||| || || ||||| |||| | || |||||||||||||| ||||||| |||||| ||||    
T  7371372 aggataaattaccagaatcagcgattacagaaactaatttttaaatgacacctaattgcaaggacgaaa 7371304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 394 - 562
Target Start/End: Original strand, 45750091 - 45750259
Alignment:
Q  394 tatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagact 493  Q
    |||||||||||||||||||||||||||||||||||||||| || ||||| ||||||  |||||||  | |||||||||||| |||||| ||||||||| |    
T  45750091 tatttttgtccattcccatgccattttgctaatttgatgacgtggcagtgattaagttggtcaaatgatgaaattttaaatgattaaacaatgcaagagt 45750190  T
Q  494 agtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    |  || | ||||||||||| ||||||||| |||||||||||||| ||||||| |||||| |||| ||||    
T  45750191 aaattgctaggattagcgattacaaagactaatttttaaatgacgcctaattgcaaggacgaaacacat 45750259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 390 - 569
Target Start/End: Complemental strand, 46899242 - 46899063
Alignment:
Q  390 agggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaa 489  Q
    |||| ||||||||||||||||||||||||||| | |||||||||||| ||||| |||||  |||   | | |||||||||||||| ||||| || |||||    
T  46899242 agggcatttttgtccattcccatgccattttgtttatttgatgatgtggcagtaattaactgggctcagggacgaaattttaaatgattaatgattgcaa 46899143  T
Q  490 gactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
      ||||||| |||| |||||||||||||  |||||||||||||| ||||||||||| || ||||||||||||||||||||    
T  46899142 agctagtttgcaagaattagcgaatacatggaccaatttttaaacgacccctaattgcatggatgaaatacatatttaag 46899063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 439 - 569
Target Start/End: Complemental strand, 36694414 - 36694284
Alignment:
Q  439 cagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacc 538  Q
    |||| ||||||  ||||||||  ||||||||||||| ||||| || |||||||||||||| |||||||||||||||||| ||||||||||||||| ||||    
T  36694414 cagtgattaagttggtcaaagggcgaaattttaaatgattaatgattgcaagactagtttgcaaggattagcgaatacatagaccaatttttaaacgacc 36694315  T
Q  539 cctaattacaaggatgaaatacatatttaag 569  Q
    ||||||| |||||||||||||||||||||||    
T  36694314 cctaattgcaaggatgaaatacatatttaag 36694284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 439 - 569
Target Start/End: Complemental strand, 36710515 - 36710385
Alignment:
Q  439 cagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacc 538  Q
    |||| ||||||  ||||||||  ||||||||||||| ||||| || |||||||||||||| |||||||||||||||||| ||||||||||||||| ||||    
T  36710515 cagtgattaagttggtcaaagggcgaaattttaaatgattaatgattgcaagactagtttgcaaggattagcgaatacatagaccaatttttaaacgacc 36710416  T
Q  539 cctaattacaaggatgaaatacatatttaag 569  Q
    ||||||| |||||||||||||||||||||||    
T  36710415 cctaattgcaaggatgaaatacatatttaag 36710385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 389 - 562
Target Start/End: Complemental strand, 49955529 - 49955356
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||  |||||||| || ||||||||||| |||||| ||||||    
T  49955529 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtggcagtgattaagttggtcaaaggacaaaattttaaatgattaaacaatgca 49955430  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    ||  ||  || | ||||||||||| ||||  ||| |||||||||||||  ||||||| |||||| |||| ||||    
T  49955429 agggtaaattgccaggattagcgattacagggactaatttttaaatgatgcctaattgcaaggacgaaacacat 49955356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 389 - 562
Target Start/End: Original strand, 49955591 - 49955764
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    |||||||||||||||||||||||||||||||||||||||||||||  | || || ||||||  |||||||| |||||||||||||| |||||| ||||||    
T  49955591 gagggtatttttgtccattcccatgccattttgctaatttgatgacttggcggtgattaagttggtcaaaggacgaaattttaaatgattaaacaatgca 49955690  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    ||  ||  || | ||||||| ||| ||||||||| |||||||||||||| ||||||| |||||| |||| ||||    
T  49955691 agggtaaattgccaggattaacgattacaaagactaatttttaaatgacgcctaattgcaaggacgaaacacat 49955764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 436 - 568
Target Start/End: Complemental strand, 37578327 - 37578195
Alignment:
Q  436 tagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatg 535  Q
    ||||||| ||||||  ||||||||||||||||||||||| ||||| || || ||| ||||||| ||||||||||||||||||  |||||||||||||| |    
T  37578327 tagcagtgattaagttggtcaaagaacgaaattttaaatgattaatgattggaaggctagtttgcaaggattagcgaatacagggaccaatttttaaacg 37578228  T
Q  536 acccctaattacaaggatgaaatacatatttaa 568  Q
    |||||||||| ||||||||||||||||||||||    
T  37578227 acccctaattgcaaggatgaaatacatatttaa 37578195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 438 - 569
Target Start/End: Original strand, 30711622 - 30711753
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  |||||||  |||||||||||||| ||||| || |||||| ||||||| |||||||||||||||||| ||||||||||||||| |||    
T  30711622 gcagtgattaagttggtcaaatgacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacagagaccaatttttaaacgac 30711721  T
Q  538 ccctaattacaaggatgaaatacatatttaag 569  Q
    |||||||| |||||||||||||||||||||||    
T  30711722 ccctaattgcaaggatgaaatacatatttaag 30711753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 390 - 569
Target Start/End: Original strand, 46899847 - 46900026
Alignment:
Q  390 agggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaa 489  Q
    |||| |||||||| ||||||||||||||||| |||||||||||| ||  |||| |||||  |||   | | |||||||||||||| ||||| || |||||    
T  46899847 agggcatttttgttcattcccatgccattttactaatttgatgacgtgacagtaattaactgggctcagggacgaaattttaaatgattaatgattgcaa 46899946  T
Q  490 gactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    | ||||||| |||| |||||||||||||  |||||||||||||||||||| ||||| || ||||||||||||||||||||    
T  46899947 ggctagtttgcaagaattagcgaatacattgaccaatttttaaatgacccttaattgcatggatgaaatacatatttaag 46900026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 438 - 568
Target Start/End: Complemental strand, 40210503 - 40210373
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  |||||||| |||||||||||||| ||||| || |||||| ||||||| |||||||||||||||||||||||||| ||||||| |||    
T  40210503 gcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaagtctagtttgcaaggattagcgaatacaaagaccaaattttaaacgac 40210404  T
Q  538 ccctaattacaaggatgaaatacatatttaa 568  Q
    | |||||| ||||||||||||||||||||||    
T  40210403 cactaattgcaaggatgaaatacatatttaa 40210373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 389 - 562
Target Start/End: Complemental strand, 8898699 - 8898526
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||  |||| |||||   |||||||| |||||||||||||| |||||| ||| ||    
T  8898699 gagggtatttttgtccattcccatgccattttgctaatttgatgacgtgacagtgattaaattggtcaaaggacgaaattttaaatgattaaacaataca 8898600  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    ||| ||  |||| || |||||||| ||||  ||| |||||||||||||| ||||||| |||||| |||| ||||    
T  8898599 agagtaaattaccagaattagcgattacagtgactaatttttaaatgacgcctaattgcaaggacgaaacacat 8898526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 389 - 562
Target Start/End: Complemental strand, 17189136 - 17188963
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    |||||||||||||||||||||||||||||||||||||||||||||  | | ||| ||||||| |||||||  |||||||||||||| |||||| ||||||    
T  17189136 gagggtatttttgtccattcccatgccattttgctaatttgatgacttggtagtgattaagctggtcaaatgacgaaattttaaatgattaaataatgca 17189037  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    ||  ||  || | ||||||||||| ||||  ||| |||||||||||||| ||||||| |||||| |||| ||||    
T  17189036 agggtaaattgccaggattagcgattacagggactaatttttaaatgacgcctaattgcaaggacgaaacacat 17188963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 389 - 562
Target Start/End: Complemental strand, 40714626 - 40714453
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||  |||||||  |||||||||||||| |||||| ||||||    
T  40714626 gagggtatttttgtccattcccatgccattttgctaatttgatgacgtggcagtgattaagttggtcaaatgacgaaattttaaatgattaaacaatgca 40714527  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    ||  ||  || | ||||||| ||| ||||  ||| |||||||||||||| ||||||| |||||| |||| ||||    
T  40714526 agggtaaattgccaggattaacgattacagggactaatttttaaatgacgcctaattgcaaggacgaaacacat 40714453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 438 - 569
Target Start/End: Original strand, 6367857 - 6367988
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  |||||||| |||||||||||||| ||||| || |||||| ||||||| ||||||||||||||||||  |||||||||||||| |||    
T  6367857 gcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacagggaccaatttttaaacgac 6367956  T
Q  538 ccctaattacaaggatgaaatacatatttaag 569  Q
    || ||||| |||||||||||||||||||||||    
T  6367957 ccttaattgcaaggatgaaatacatatttaag 6367988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 392 - 562
Target Start/End: Original strand, 20760752 - 20760922
Alignment:
Q  392 ggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaaga 491  Q
    |||||||||||||||||||||| |||||||||||||||||||| | | ||| ||||||  |||||||| |||||||||||||| |||||| ||||||||     
T  20760752 ggtatttttgtccattcccatgtcattttgctaatttgatgatttggtagtgattaagttggtcaaaggacgaaattttaaatgattaaacaatgcaagg 20760851  T
Q  492 ctagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
     ||  || | ||||||||||| |||| |||| |||||||||||||| |||||||  ||||| |||| ||||    
T  20760852 gtaaattgccaggattagcgattacagagactaatttttaaatgacgcctaattgtaaggacgaaacacat 20760922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 388 - 562
Target Start/End: Complemental strand, 35038638 - 35038464
Alignment:
Q  388 tgagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgc 487  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| || ||||| ||| ||  |||||||| |||||||||||||| |||||| ||| |    
T  35038638 tgaggatatttttgtccattcccatgccattttgctaatttgatgacgtggcagtgattgagttggtcaaaggacgaaattttaaatgattaaacaatac 35038539  T
Q  488 aagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    || | || ||| | ||||||| ||| ||||  || ||||||||||||||||| ||||| |||||| |||| ||||    
T  35038538 aaaagtaatttgctaggattaacgattacatggatcaatttttaaatgacccttaattgcaaggacgaaacacat 35038464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 452 - 569
Target Start/End: Original strand, 26024701 - 26024818
Alignment:
Q  452 ggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaagg 551  Q
    |||||||| |||||||||||||| ||||| || |||||||||||||| ||||||||||||| ||||  |||||||||||||| ||||||||||| |||||    
T  26024701 ggtcaaaggacgaaattttaaatgattaatgattgcaagactagtttgcaaggattagcgattacagggaccaatttttaaacgacccctaattgcaagg 26024800  T
Q  552 atgaaatacatatttaag 569  Q
    || |||||||||||||||    
T  26024801 atcaaatacatatttaag 26024818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 389 - 562
Target Start/End: Original strand, 35040858 - 35041031
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    |||||||||||||||||||||||||||||||||||||||||||||  | | ||| ||||||  |||||||| |||||||||||||| |||||| ||||||    
T  35040858 gagggtatttttgtccattcccatgccattttgctaatttgatgacttggtagtgattaagttggtcaaaggacgaaattttaaatgattaaacaatgca 35040957  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    ||  ||  ||   ||||||||||| ||||  ||| ||||||||||||||  ||||||||||||| |||| ||||    
T  35040958 agggtaaattgtcaggattagcgattacatggactaatttttaaatgacggctaattacaaggacgaaacacat 35041031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 452 - 569
Target Start/End: Original strand, 43759131 - 43759248
Alignment:
Q  452 ggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaagg 551  Q
    |||||||| |||||||||||||| ||| |||| |||||| ||||||| ||||||||||||||||||  |||| ||||||||| ||||||||||| |||||    
T  43759131 ggtcaaaggacgaaattttaaatgattgaagattgcaaggctagtttgcaaggattagcgaatacagggaccgatttttaaacgacccctaattgcaagg 43759230  T
Q  552 atgaaatacatatttaag 569  Q
    ||||||||||||||||||    
T  43759231 atgaaatacatatttaag 43759248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 389 - 562
Target Start/End: Complemental strand, 45750024 - 45749851
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    |||||||||||||||||||| ||||||||||||||||||||||||  | | ||| ||||||   ||||||| |||||||||||||| |||||| ||||||    
T  45750024 gagggtatttttgtccattctcatgccattttgctaatttgatgacttggtagtgattaagtttgtcaaaggacgaaattttaaatgattaaacaatgca 45749925  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    ||  ||  ||   ||||||| ||| ||||||||| |||||||||||||| ||||||| ||||||||||| ||||    
T  45749924 agtgtaaattgtcaggattaacgattacaaagactaatttttaaatgacgcctaattgcaaggatgaaacacat 45749851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 438 - 569
Target Start/End: Complemental strand, 19017762 - 19017631
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  |||||| |||||||||||||||| ||||| || ||||||||||||||  ||||||||||||||||| | | |||||||||||  ||    
T  19017762 gcagtgattaagttggtcaacgaacgaaattttaaatgattaatgattgcaagactagtttgtaaggattagcgaatacagaaatcaatttttaaacaac 19017663  T
Q  538 ccctaattacaaggatgaaatacatatttaag 569  Q
    |||||||| |||||||||||||||||||||||    
T  19017662 ccctaattgcaaggatgaaatacatatttaag 19017631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 438 - 568
Target Start/End: Original strand, 1841754 - 1841883
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  |||||||| |||||||||||||| ||||| || |||||| ||||||| ||||||||||||||||||  || ||||||||||| |||    
T  1841754 gcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaag-ctagtttgcaaggattagcgaatacagggaacaatttttaaacgac 1841852  T
Q  538 ccctaattacaaggatgaaatacatatttaa 568  Q
    |||| ||||||||||||||||||||||||||    
T  1841853 ccctcattacaaggatgaaatacatatttaa 1841883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 439 - 569
Target Start/End: Complemental strand, 24009707 - 24009577
Alignment:
Q  439 cagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacc 538  Q
    |||| ||||||  |||||||| | |||||||||||| ||||| || |||||| ||||||  |||||||||| |||||||| |||||||||||||| ||||    
T  24009707 cagtgattaagttggtcaaaggatgaaattttaaatgattaatgattgcaaggctagttggcaaggattagtgaatacaaggaccaatttttaaacgacc 24009608  T
Q  539 cctaattacaaggatgaaatacatatttaag 569  Q
    ||||||| |||||||||||||||||||||||    
T  24009607 cctaattgcaaggatgaaatacatatttaag 24009577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 452 - 569
Target Start/End: Original strand, 1103770 - 1103887
Alignment:
Q  452 ggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaagg 551  Q
    |||||||| |||||||||||||| ||||| || |||||||||||||| ||||||||||||||||||  |||||||||||||| ||||  ||||| |||||    
T  1103770 ggtcaaaggacgaaattttaaatgattaatgattgcaagactagtttgcaaggattagcgaatacagggaccaatttttaaacgacctttaattgcaagg 1103869  T
Q  552 atgaaatacatatttaag 569  Q
    |||||||| |||||||||    
T  1103870 atgaaatatatatttaag 1103887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 452 - 569
Target Start/End: Complemental strand, 13914187 - 13914070
Alignment:
Q  452 ggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaagg 551  Q
    |||||||| |||||||||||||| ||||| || |||||||||| ||| ||||||||||||||||||  ||| |||||||||| ||||||||||| |||||    
T  13914187 ggtcaaaggacgaaattttaaatgattaatgattgcaagactaatttgcaaggattagcgaatacatggactaatttttaaacgacccctaattgcaagg 13914088  T
Q  552 atgaaatacatatttaag 569  Q
    |||||||||| |||||||    
T  13914087 atgaaatacacatttaag 13914070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 452 - 569
Target Start/End: Complemental strand, 17661970 - 17661854
Alignment:
Q  452 ggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaagg 551  Q
    |||||||| |||||||||||||| ||||| || |||||  ||||||| ||||||||||||||||||  |||||||||||||| ||||||||||| |||||    
T  17661970 ggtcaaaggacgaaattttaaatgattaatgattgcaatgctagtttgcaaggattagcgaatacag-gaccaatttttaaacgacccctaattgcaagg 17661872  T
Q  552 atgaaatacatatttaag 569  Q
    ||||||||||||||||||    
T  17661871 atgaaatacatatttaag 17661854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 438 - 569
Target Start/End: Complemental strand, 183354 - 183223
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  |||||||| || ||||||||||| ||||| || |||||| ||||||| ||||||||||||||||||  |||||||||||||| |||    
T  183354 gcagtgattaagttggtcaaaggactaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacagggaccaatttttaaacgac 183255  T
Q  538 ccctaattacaaggatgaaatacatatttaag 569  Q
    ||||||||  |||||| |||||||||||||||    
T  183254 ccctaattgtaaggatcaaatacatatttaag 183223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 438 - 569
Target Start/End: Original strand, 48779414 - 48779545
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  |||||||| |||||||||||||| ||||| || |||||||||||||| ||||||||||| ||||||  ||| |||||||||  |||    
T  48779414 gcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaagactagtttgcaaggattagcaaatacatggactaatttttaagcgac 48779513  T
Q  538 ccctaattacaaggatgaaatacatatttaag 569  Q
     ||||||| |||||||||||||||||||||||    
T  48779514 tcctaattgcaaggatgaaatacatatttaag 48779545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 438 - 564
Target Start/End: Original strand, 49723021 - 49723147
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  |||||||| | |||||||||||| ||||| || || ||| ||||||| ||||||||||||||||||  |||||||||||||| |||    
T  49723021 gcagtgattaagttggtcaaaggatgaaattttaaatgattaatgattgaaaggctagtttgcaaggattagcgaatacatggaccaatttttaaacgac 49723120  T
Q  538 ccctaattacaaggatgaaatacatat 564  Q
    |||||||| ||||||||||||||||||    
T  49723121 ccctaattgcaaggatgaaatacatat 49723147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 388 - 569
Target Start/End: Original strand, 5734956 - 5735137
Alignment:
Q  388 tgagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgc 487  Q
    |||||| ||||||||| |||| |||||||||||| ||||||||||| ||  |||| |||||  |||   | | |||||||||||||| ||||| || ||     
T  5734956 tgagggcatttttgtctattctcatgccattttgttaatttgatgacgtgacagtaattaactgggctcagggacgaaattttaaatgattaatgattgt 5735055  T
Q  488 aagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    ||| ||||||| ||||||||||||||||||   ||||||||||||| ||  ||||||| || ||||||||||||||||||||    
T  5735056 aaggctagtttgcaaggattagcgaatacatgaaccaatttttaaacgattcctaattgcagggatgaaatacatatttaag 5735137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 389 - 490
Target Start/End: Original strand, 31058301 - 31058402
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||  |||||||  |||||||||||||| |||||| ||||||    
T  31058301 gagggtatttttgtccattcccatgccattttgctaatttgatgacgtggcagtgattaagttggtcaaaatacgaaattttaaatgattaaacaatgca 31058400  T
Q  489 ag 490  Q
    ||    
T  31058401 ag 31058402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 452 - 569
Target Start/End: Original strand, 32917569 - 32917686
Alignment:
Q  452 ggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaagg 551  Q
    |||||||| | |||||||||||| ||||| || |||||| ||||||| ||||||||| |||||||| ||||||||||||||| ||||| ||||| ||||     
T  32917569 ggtcaaaggatgaaattttaaatgattaatgattgcaaggctagtttgcaaggattaacgaatacagagaccaatttttaaacgacccttaattgcaaga 32917668  T
Q  552 atgaaatacatatttaag 569  Q
    ||||||||||||||||||    
T  32917669 atgaaatacatatttaag 32917686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 389 - 562
Target Start/End: Original strand, 40714688 - 40714860
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    ||||||||||||||||||||| |||||||||||||||||||||||  | | ||| ||||||  |||||||| |||||||||||||| |||||| ||||||    
T  40714688 gagggtatttttgtccattcc-atgccattttgctaatttgatgacttggtagtgattaagttggtcaaaggacgaaattttaaatgattaaacaatgca 40714786  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    |   ||  || | ||||||||||| ||||  ||| |||||||||||||| ||||||| |||||| |||| ||||    
T  40714787 aaggtaaattgccaggattagcgattacatggactaatttttaaatgacgcctaattgcaaggacgaaacacat 40714860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 452 - 569
Target Start/End: Complemental strand, 47999242 - 47999125
Alignment:
Q  452 ggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaagg 551  Q
    |||||||| || ||||||||||| ||||| || |||||| ||||||| ||||||||||||||||||  |||||||||||||| || |||||||| |||||    
T  47999242 ggtcaaaggactaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacagggaccaatttttaaacgatccctaattgcaagg 47999143  T
Q  552 atgaaatacatatttaag 569  Q
    || |||||||||||||||    
T  47999142 atcaaatacatatttaag 47999125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 461 - 569
Target Start/End: Complemental strand, 4960650 - 4960542
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| ||||||||  ||  || |||||||||||||||||||||| ||||||||||| ||||||||||| ||| ||||||||||    
T  4960650 acgaaattttaaatgattaaacaatgcaagggtaaattgcaaggattagcgaatacaaagagcaatttttaaacgacccctaattgcaatgatgaaatac 4960551  T
Q  561 atatttaag 569  Q
    |||||||||    
T  4960550 atatttaag 4960542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 389 - 562
Target Start/End: Original strand, 8898761 - 8898934
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    |||||||||||||||||||||| || |||||||||||||||||||  | | ||| ||||||  |||||||  |||||||||||||| |||||| ||||||    
T  8898761 gagggtatttttgtccattcccgtgtcattttgctaatttgatgacttggtagtgattaagttggtcaaatgacgaaattttaaatgattaaacaatgca 8898860  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    ||  ||  ||   || ||||| || |||| |||| |||||||||||||| |||||||||||||| |||| ||||    
T  8898861 agggtaaattgtcagtattagtgattacagagactaatttttaaatgacgcctaattacaaggacgaaacacat 8898934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 389 - 490
Target Start/End: Complemental strand, 28324986 - 28324885
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| || ||||| ||||||  |||||||  |||||||||||||| |||||| ||||||    
T  28324986 gagggtatttttgtccatttccatgccattttgctaatttgatgacgtggcagtgattaagttggtcaaaagacgaaattttaaatgattaaataatgca 28324887  T
Q  489 ag 490  Q
    ||    
T  28324886 ag 28324885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 461 - 569
Target Start/End: Complemental strand, 19515929 - 19515821
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    ||||||||||||||||||||| ||||||||  ||  || | || |||| ||| |||||||||||||||||||| ||||||||||| ||||||||||||||    
T  19515929 acgaaattttaaataattaaacaatgcaagggtaaatttccagaattaacgattacaaagaccaatttttaaacgacccctaattgcaaggatgaaatac 19515830  T
Q  561 atatttaag 569  Q
    |||||||||    
T  19515829 atatttaag 19515821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 394 - 562
Target Start/End: Complemental strand, 37929595 - 37929427
Alignment:
Q  394 tatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagact 493  Q
    ||||||||||||||| |||||||||||||||||||||||| ||  |||| ||||||  |||||||| |||||||||||||| |||||| |||| |||  |    
T  37929595 tatttttgtccattctcatgccattttgctaatttgatgacgttacagtgattaagttggtcaaaggacgaaattttaaatgattaaataatgtaagggt 37929496  T
Q  494 agtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    |  ||   |||||||||||  |||  ||| |||||||||||||| ||||||| |||||| |||| ||||    
T  37929495 aaattgtcaggattagcgataacagggactaatttttaaatgacgcctaattgcaaggacgaaacacat 37929427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 439 - 567
Target Start/End: Original strand, 41099029 - 41099157
Alignment:
Q  439 cagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacc 538  Q
    |||| ||||||  |||||||  |||||||||||||| ||||| || || |||  |||||| |||||||||||||||||| ||||||||||||||| ||||    
T  41099029 cagtgattaagttggtcaaatgacgaaattttaaatgattaatgattgtaaggttagtttgcaaggattagcgaatacagagaccaatttttaaacgacc 41099128  T
Q  539 cctaattacaaggatgaaatacatattta 567  Q
     ||||||  ||||||||||||||||||||    
T  41099129 actaattgtaaggatgaaatacatattta 41099157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 452 - 569
Target Start/End: Complemental strand, 19323011 - 19322894
Alignment:
Q  452 ggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaagg 551  Q
    |||||||||||||| |||||||| ||||| || |||||   |||||| ||||||||||||||||||   || |||||||||| ||||| |||||| ||||    
T  19323011 ggtcaaagaacgaacttttaaatgattaatgattgcaaagttagtttgcaaggattagcgaatacatgaacgaatttttaaacgacccgtaattataagg 19322912  T
Q  552 atgaaatacatatttaag 569  Q
    ||||||||||||||||||    
T  19322911 atgaaatacatatttaag 19322894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 388 - 545
Target Start/End: Complemental strand, 32132487 - 32132330
Alignment:
Q  388 tgagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgc 487  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||| || ||||| |||||| ||||  | | |||||||||||| | ||||||   ||     
T  32132487 tgaggttatttttgtccattcccatgacattttgctaatttgatgacgtggcagtaattaagtgggtgtagggacgaaattttaattgattaaactttgt 32132388  T
Q  488 aagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaatt 545  Q
    |||| || ||| ||||||||| ||| ||||  ||| ||||||||||||||| ||||||    
T  32132387 aagagtaatttgcaaggattaacgattacatggacgaatttttaaatgaccactaatt 32132330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 461 - 570
Target Start/End: Complemental strand, 42248583 - 42248474
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| ||||||||  ||  || | | ||||||||| |||||||||||||||||||| |||| |||||| ||||||||||||||    
T  42248583 acgaaattttaaatgattaaacaatgcaagggtaaattgccacgattagcgactacaaagaccaatttttaaacgaccactaattgcaaggatgaaatac 42248484  T
Q  561 atatttaagt 570  Q
    ||||||||||    
T  42248483 atatttaagt 42248474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 461 - 569
Target Start/End: Complemental strand, 6367672 - 6367564
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| ||||||||  ||  || | ||||||||||| ||||  |||||||||||||| ||||||||||| ||||||||||||||    
T  6367672 acgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcgattacagggaccaatttttaaacgacccctaattgcaaggatgaaatac 6367573  T
Q  561 atatttaag 569  Q
    |||||||||    
T  6367572 atatttaag 6367564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 461 - 565
Target Start/End: Complemental strand, 17691329 - 17691225
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| |||||||||||| ||| ||||||||||||| ||||  |||||||||||||| |||||||| ||  ||||| |||||||    
T  17691329 acgaaattttaaatgattaaacaatgcaagactaatttgcaaggattagcgattacagggaccaatttttaaacgacccctacttgtaaggacgaaatac 17691230  T
Q  561 atatt 565  Q
    |||||    
T  17691229 atatt 17691225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 394 - 562
Target Start/End: Complemental strand, 30326673 - 30326505
Alignment:
Q  394 tatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagact 493  Q
    |||||||||||||||||||| |||||||||||||||||||  | | ||| ||||||   || |||   ||||||||||||| |||||| ||||||||  |    
T  30326673 tatttttgtccattcccatgtcattttgctaatttgatgacttggtagtgattaagttagttaaatgtcgaaattttaaatgattaaacaatgcaagggt 30326574  T
Q  494 agtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    |  |||| || |||||||| |||| |||| |||||||||||||| ||||||| |||||| |||| ||||    
T  30326573 aaattaccagaattagcgattacagagactaatttttaaatgacgcctaattgcaaggacgaaacacat 30326505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 461 - 569
Target Start/End: Complemental strand, 34849121 - 34849013
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| ||||||   ||||||  || ||| ||||||||||||||||||  |||||||||||||| ||||||||||| ||||||| ||||||    
T  34849121 acgaaattttaaatgattaaattttgcaagggtaatttgcaaggattagcgaatacagggaccaatttttaaaagacccctaattgcaaggattaaatac 34849022  T
Q  561 atatttaag 569  Q
    |||||||||    
T  34849021 atatttaag 34849013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 389 - 536
Target Start/End: Original strand, 12905903 - 12906050
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    |||||||||||||||||||| |||||||||||| |||||||||||  |  |||| ||||||  |||||||  |||||||||||||| |||||| ||||||    
T  12905903 gagggtatttttgtccattctcatgccattttgttaatttgatgacttgacagtgattaagttggtcaaatgacgaaattttaaatgattaaacaatgca 12906002  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatga 536  Q
    ||  ||  || | ||||||||||| ||||  ||| |||||||||||||    
T  12906003 agggtaaattgccaggattagcgattacatggactaatttttaaatga 12906050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 461 - 568
Target Start/End: Original strand, 17692503 - 17692610
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| |||||||  ||| ||| |||||||||||||  |||  |||| ||||||||| ||||||||||| ||||||||||||||    
T  17692503 acgaaattttaaatgattaaacaatgcaaagctaatttgcaaggattagcgataacagggaccgatttttaaacgacccctaattgcaaggatgaaatac 17692602  T
Q  561 atatttaa 568  Q
    ||||||||    
T  17692603 atatttaa 17692610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 403 - 562
Target Start/End: Complemental strand, 31051118 - 31050959
Alignment:
Q  403 ccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaa 502  Q
    |||||||||||||||||| ||||||||||||  | | ||| ||||||  |||||||| |||||||||||||| |||||| |||||||   ||  || | |    
T  31051118 ccattcccatgccattttactaatttgatgacttggtagtgattaagttggtcaaaggacgaaattttaaatgattaaacaatgcaaaggtaaattgcca 31051019  T
Q  503 ggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    |||||||||| |||| |||| ||||||||||| || ||||||| |||||| |||| ||||    
T  31051018 ggattagcgattacagagactaatttttaaataacgcctaattgcaaggacgaaacacat 31050959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 467 - 569
Target Start/End: Original strand, 13300228 - 13300330
Alignment:
Q  467 ttttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatattt 566  Q
    |||||| | ||||||||||| |||| || ||| |||||||||| ||||||| ||||||||||||||| ||| ||||||| ||| ||||||||||||||||    
T  13300228 ttttaagttattaaagaatgtaagagtaatttgcaaggattagtgaatacagagaccaatttttaaacgacgcctaattgcaatgatgaaatacatattt 13300327  T
Q  567 aag 569  Q
    |||    
T  13300328 aag 13300330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 438 - 568
Target Start/End: Complemental strand, 23209494 - 23209365
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  ||||||||||| ||||||||||| ||||| || |||||| ||||||| ||||||||| |||||| ||  |  |||||||||| ||     
T  23209494 gcagtgattaagttggtcaaagaacaaaattttaaatgattaatgattgcaaggctagtttgcaaggattaacgaatataagtattaatttttaaacga- 23209396  T
Q  538 ccctaattacaaggatgaaatacatatttaa 568  Q
    |||||||| ||||||||||||||||||||||    
T  23209395 ccctaattgcaaggatgaaatacatatttaa 23209365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 463 - 569
Target Start/End: Original strand, 34850385 - 34850491
Alignment:
Q  463 gaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    |||||||||||| ||||||   ||||||  || ||| ||||||||||||||||||  |||||||||||||| ||||||||||| ||||||| ||||||||    
T  34850385 gaaattttaaatgattaaattttgcaagggtaatttgcaaggattagcgaatacagggaccaatttttaaacgacccctaattgcaaggattaaatacat 34850484  T
Q  563 atttaag 569  Q
    |||||||    
T  34850485 atttaag 34850491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 439 - 569
Target Start/End: Complemental strand, 35473763 - 35473633
Alignment:
Q  439 cagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacc 538  Q
    |||| ||||||  |||||||| || |||||||||||  |||| || | |||| ||||||| | ||||||||||| ||||  |||||||||||||| ||||    
T  35473763 cagtgattaagttggtcaaaggacaaaattttaaatgtttaatgattacaaggctagtttgccaggattagcgattacagggaccaatttttaaacgacc 35473664  T
Q  539 cctaattacaaggatgaaatacatatttaag 569  Q
    ||||||| ||||||| |||||||||||||||    
T  35473663 cctaattgcaaggattaaatacatatttaag 35473633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 452 - 569
Target Start/End: Complemental strand, 7821073 - 7820956
Alignment:
Q  452 ggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaagg 551  Q
    |||||||| |||||||||||||| |||||| ||||||||  ||  ||  |||||||||||| ||||  ||| |||| ||||| ||||||||||| |||||    
T  7821073 ggtcaaaggacgaaattttaaatgattaaacaatgcaagggtaaattgtaaggattagcgattacagggactaattattaaaggacccctaattgcaagg 7820974  T
Q  552 atgaaatacatatttaag 569  Q
    ||||||||||||||||||    
T  7820973 atgaaatacatatttaag 7820956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 500 - 569
Target Start/End: Original strand, 35152687 - 35152756
Alignment:
Q  500 caaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    |||||||||||||||||| |||| |||||||||| ||||||||||| |||||||||||||||||||||||    
T  35152687 caaggattagcgaatacagagactaatttttaaacgacccctaattgcaaggatgaaatacatatttaag 35152756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 461 - 570
Target Start/End: Original strand, 40210688 - 40210797
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| ||||||||  ||  || | || |||||||| |||||||||||||||||||| | ||||||||| ||| ||||||||||    
T  40210688 acgaaattttaaatgattaaacaatgcaagggtaaattgccagaattagcgattacaaagaccaatttttaaacggcccctaattgcaatgatgaaatac 40210787  T
Q  561 atatttaagt 570  Q
    ||||||||||    
T  40210788 atatttaagt 40210797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 454 - 566
Target Start/End: Original strand, 4960820 - 4960932
Alignment:
Q  454 tcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggat 553  Q
    |||||| |||||||||||||| ||||| || |||||| ||||||| |||||||||||||||||   |||||||||||||| |||| |||||| | || ||    
T  4960820 tcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacggggaccaatttttaaacgacctctaattgctagtat 4960919  T
Q  554 gaaatacatattt 566  Q
    |||| ||||||||    
T  4960920 gaaaaacatattt 4960932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 452 - 568
Target Start/End: Original strand, 19323201 - 19323317
Alignment:
Q  452 ggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaagg 551  Q
    |||||||||||||| |||||||| ||||| || |||||   |||||| ||||||||||||||||||   || |||||||||| || || ||||||||||     
T  19323201 ggtcaaagaacgaacttttaaatgattaatgattgcaaagttagtttgcaaggattagcgaatacatgaacgaatttttaaacgatccataattacaaga 19323300  T
Q  552 atgaaatacatatttaa 568  Q
    |||||||||||||||||    
T  19323301 atgaaatacatatttaa 19323317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 461 - 569
Target Start/End: Original strand, 23209645 - 23209753
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||| ||||| ||| || ||||||||  ||  || | ||||||||||| ||||| |||||||||||||| ||||||||||| ||||||||||||||    
T  23209645 acgaaattgtaaatgattgaacaatgcaagggtaaattgccaggattagcgattacaaggaccaatttttaaacgacccctaattgcaaggatgaaatac 23209744  T
Q  561 atatttaag 569  Q
    |||||||||    
T  23209745 atatttaag 23209753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 500 - 568
Target Start/End: Complemental strand, 40435416 - 40435348
Alignment:
Q  500 caaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaa 568  Q
    ||||||||| ||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  40435416 caaggattaacgaatacaatgaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaa 40435348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 461 - 569
Target Start/End: Complemental strand, 40772617 - 40772509
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| ||||||||| ||  ||   ||||||||||| ||||  |||||||||||||| ||||| ||||| ||||||||||||||    
T  40772617 acgaaattttaaatgattaaacaatgcaagagtaaattgtcaggattagcgattacagggaccaatttttaaacgacccataattgcaaggatgaaatac 40772518  T
Q  561 atatttaag 569  Q
    |||||||||    
T  40772517 atatttaag 40772509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 438 - 569
Target Start/End: Complemental strand, 34464582 - 34464451
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  |||||||  |||||||||||||| |||||| | ||||||  ||  || | | ||||||||| ||||  |||||||||||||| |||    
T  34464582 gcagtgattaagttggtcaaatgacgaaattttaaatgattaaacattgcaagggtaaattgccaagattagcgattacatggaccaatttttaaacgac 34464483  T
Q  538 ccctaattacaaggatgaaatacatatttaag 569  Q
    |||||||| |||||||||||||||||||||||    
T  34464482 ccctaattgcaaggatgaaatacatatttaag 34464451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 461 - 568
Target Start/End: Complemental strand, 46163140 - 46163033
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| ||||||||  ||  ||   ||||||||||| ||||  |||||||||||||| ||||||||||||||| ||||||||||    
T  46163140 acgaaattttaaatgattaaacaatgcaagggtaaattgtcaggattagcgattacatggaccaatttttaaacgacccctaattacaatgatgaaatac 46163041  T
Q  561 atatttaa 568  Q
    ||||||||    
T  46163040 atatttaa 46163033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 439 - 569
Target Start/End: Original strand, 7821250 - 7821379
Alignment:
Q  439 cagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacc 538  Q
    |||| ||||||  |||||||| |||||||| ||||| ||||| || |||| | ||||||| ||||||||||||||||| | |||||||||||||| ||||    
T  7821250 cagtgattaagttggtcaaaggacgaaattataaatgattaatgattgcacggctagtttgcaaggattagcgaatac-atgaccaatttttaaacgacc 7821348  T
Q  539 cctaattacaaggatgaaatacatatttaag 569  Q
      ||||| ||| |||||||| ||||||||||    
T  7821349 tttaattgcaatgatgaaatgcatatttaag 7821379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 464 - 569
Target Start/End: Complemental strand, 41098840 - 41098735
Alignment:
Q  464 aaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacata 563  Q
    ||||||||||| |||||| ||||||||  ||  ||   ||||||||||| |||| ||||||||||||||| ||||||||||| |||| ||||||||||||    
T  41098840 aaattttaaatgattaaacaatgcaagggtaaattgtcaggattagcgattacagagaccaatttttaaacgacccctaattgcaagaatgaaatacata 41098741  T
Q  564 tttaag 569  Q
    ||||||    
T  41098740 tttaag 41098735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 461 - 569
Target Start/End: Complemental strand, 26024533 - 26024425
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    ||||| |||||||| |||||| ||||||||  ||  || | ||||||||||| |||| ||||||||||||||| ||||||||||| |||| || ||||||    
T  26024533 acgaacttttaaatgattaaacaatgcaagggtaaattgccaggattagcgattacagagaccaatttttaaacgacccctaattgcaagaatcaaatac 26024434  T
Q  561 atatttaag 569  Q
    |||||||||    
T  26024433 atatttaag 26024425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 461 - 569
Target Start/End: Complemental strand, 30711437 - 30711329
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| ||||||||  ||  || | ||||||||||| || | ||| |||||||||||  |||||||||| ||||||||||||||    
T  30711437 acgaaattttaaatgattaaacaatgcaaggataaattgctaggattagcgattatagagatcaatttttaaacaacccctaattgcaaggatgaaatac 30711338  T
Q  561 atatttaag 569  Q
    |||||||||    
T  30711337 atatttaag 30711329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 461 - 569
Target Start/End: Original strand, 36694566 - 36694674
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| ||||||||  ||  ||   ||||||||||| |||| |||||||||||||||  || ||||||| ||||||||||||||    
T  36694566 acgaaattttaaatgattaaacaatgcaagggtaaattgtcaggattagcgattacagagaccaatttttaaacaacacctaattgcaaggatgaaatac 36694665  T
Q  561 atatttaag 569  Q
    |||||||||    
T  36694666 atatttaag 36694674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 461 - 569
Target Start/End: Original strand, 36710667 - 36710775
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| ||||||||  ||  ||   ||||||||||| |||| |||||||||||||||  || ||||||| ||||||||||||||    
T  36710667 acgaaattttaaatgattaaacaatgcaagggtaaattgtcaggattagcgattacagagaccaatttttaaacaacacctaattgcaaggatgaaatac 36710766  T
Q  561 atatttaag 569  Q
    |||||||||    
T  36710767 atatttaag 36710775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 461 - 569
Target Start/End: Original strand, 37578510 - 37578618
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||  |||| |||  ||  || | ||||||||||| |||||| ||||||||||||| |||||| |||| ||||||||||||||    
T  37578510 acgaaattttaaatgattaatcaatgtaagggtaaattgccaggattagcgattacaaaaaccaatttttaaacgacccccaattgcaaggatgaaatac 37578609  T
Q  561 atatttaag 569  Q
    |||||||||    
T  37578610 atatttaag 37578618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 461 - 568
Target Start/End: Original strand, 24009859 - 24009966
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| ||||||||  ||  || | |||||| |||| ||||| |||||||||||||| || |||||||| ||||||||||||||    
T  24009859 acgaaattttaaatgattaaacaatgcaagggtaaattgccaggattggcgattacaatgaccaatttttaaacgatccctaattgcaaggatgaaatac 24009958  T
Q  561 atatttaa 568  Q
    | ||||||    
T  24009959 aaatttaa 24009966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 502 - 569
Target Start/End: Complemental strand, 31197134 - 31197067
Alignment:
Q  502 aggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    ||||||| |||||||| |||| |||||||||||||||||||||| || ||||||||||||||||||||    
T  31197134 aggattaacgaatacagagacaaatttttaaatgacccctaattgcagggatgaaatacatatttaag 31197067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 462 - 560
Target Start/End: Original strand, 42248790 - 42248886
Alignment:
Q  462 cgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||||||||  | |||||||||||||| |||| ||||||||||||| |||||||||||| ||    ||||||||| |||||||||||||    
T  42248790 cgaaattttaaataattaataattgcaagactagtttgcaagaattagcgaatacagagaccaattttttaa--caccctaattagaaggatgaaatac 42248886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 461 - 569
Target Start/End: Original strand, 183509 - 183618
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccc-taattacaaggatgaaata 559  Q
    |||||||||||||| |||||| |||||| |  ||  || | ||||||||||| ||||  |||||||||||||| |||||| ||||||||||||| |||||    
T  183509 acgaaattttaaatgattaaataatgcaggggtaaattgctaggattagcgattacagggaccaatttttaaacgaccccctaattacaaggatcaaata 183608  T
Q  560 catatttaag 569  Q
    ||||||||||    
T  183609 catatttaag 183618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 464 - 569
Target Start/End: Original strand, 19017950 - 19018055
Alignment:
Q  464 aaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacata 563  Q
    ||||||||||| |||||| ||||||||  ||  || | ||||||||||||||||  |||||||||||||| ||||  ||||| ||||||| |||||||||    
T  19017950 aaattttaaatgattaaataatgcaagggtaaattgccaggattagcgaatacatggaccaatttttaaacgacctgtaattgcaaggataaaatacata 19018049  T
Q  564 tttaag 569  Q
    ||||||    
T  19018050 tttaag 19018055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 500 - 569
Target Start/End: Original strand, 40772816 - 40772885
Alignment:
Q  500 caaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    ||||||||||||||||||  |||| ||||| ||| ||||||||||| |||||||||||||||||||||||    
T  40772816 caaggattagcgaatacagggaccgattttcaaacgacccctaattgcaaggatgaaatacatatttaag 40772885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 504 - 569
Target Start/End: Original strand, 47999453 - 47999518
Alignment:
Q  504 gattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    ||||||||| ||||  |||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  47999453 gattagcgattacagggaccaatttttaaacgacccctaattacaaggatcaaatacatatttaag 47999518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 461 - 569
Target Start/End: Original strand, 13914385 - 13914493
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| ||| ||||  ||  || | ||||||||||| ||||  ||||||||||||||  ||| |||||| ||||||||||||||    
T  13914385 acgaaattttaaatgattaaacaatacaagggtaaattgccaggattagcgattacatggaccaatttttaaacaacctctaattgcaaggatgaaatac 13914484  T
Q  561 atatttaag 569  Q
    |||||||||    
T  13914485 atatttaag 13914493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 461 - 569
Target Start/End: Complemental strand, 25647994 - 25647886
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| |||||| |  ||  || | ||||||| ||| ||||  |||||||||||||| ||||||||||| ||||||| ||||||    
T  25647994 acgaaattttaaatgattaaataatgcaggggtaaattgccaggattaacgattacagggaccaatttttaaacgacccctaattgcaaggatcaaatac 25647895  T
Q  561 atatttaag 569  Q
    |||||||||    
T  25647894 atatttaag 25647886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 500 - 568
Target Start/End: Complemental strand, 42533095 - 42533027
Alignment:
Q  500 caaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaa 568  Q
    ||||||||| ||||||||  ||| |||||||||| ||||||||||| ||||||||||||||||||||||    
T  42533095 caaggattaacgaatacatggactaatttttaaacgacccctaattgcaaggatgaaatacatatttaa 42533027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 391 - 447
Target Start/End: Original strand, 46282713 - 46282769
Alignment:
Q  391 gggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcatta 447  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||||    
T  46282713 gggtatttttgtcaattcccatgccattttgctaatttgatgatgtggcagtgatta 46282769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 438 - 569
Target Start/End: Original strand, 7231544 - 7231675
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  |||||||  || ||||||||||||||||| || | |||  |||||||  || |||||  |||||||  || ||||||||||| |||    
T  7231544 gcagtgattaagttggtcaaatgacaaaattttaaataattaatgattacaaagctagtttgtaaagattaatgaatacagtgatcaatttttaaacgac 7231643  T
Q  538 ccctaattacaaggatgaaatacatatttaag 569  Q
     ||||||||||||||| |||||||||||||||    
T  7231644 tcctaattacaaggataaaatacatatttaag 7231675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 439 - 569
Target Start/End: Original strand, 48692310 - 48692440
Alignment:
Q  439 cagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacc 538  Q
    |||| |||||| |||||||   || ||||||||||| ||||| |  || ||| ||| ||| |||| |||| ||||||||| || ||||||||||| ||||    
T  48692310 cagtgattaagtgggtcaagagacaaaattttaaatgattaatgtttgtaaggctaatttgcaagaattaacgaatacaatgatcaatttttaaacgacc 48692409  T
Q  539 cctaattacaaggatgaaatacatatttaag 569  Q
     |||||||||| ||| |||||||||||||||    
T  48692410 tctaattacaatgatcaaatacatatttaag 48692440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 500 - 569
Target Start/End: Original strand, 14879315 - 14879384
Alignment:
Q  500 caaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    |||||||||||||||| | ||||||||||||||| || |||||||| ||| ||||||||| |||||||||    
T  14879315 caaggattagcgaatatagagaccaatttttaaacgatccctaattgcaatgatgaaatatatatttaag 14879384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 389 - 490
Target Start/End: Original strand, 28325048 - 28325149
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    |||| |||||||||||||||| ||| |||||||||||||||||||  |   ||| ||||||  |||||||  |||||||||||||| |||||| ||||||    
T  28325048 gaggatatttttgtccattcctatgtcattttgctaatttgatgacttgatagtgattaagttggtcaaaagacgaaattttaaatgattaaacaatgca 28325147  T
Q  489 ag 490  Q
    ||    
T  28325148 ag 28325149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 504 - 569
Target Start/End: Original strand, 34464810 - 34464875
Alignment:
Q  504 gattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    ||||||||| ||||  ||||||||||||||  |||||||||| |||||||||||||||||||||||    
T  34464810 gattagcgattacatggaccaatttttaaacaacccctaattgcaaggatgaaatacatatttaag 34464875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 461 - 569
Target Start/End: Original strand, 17662168 - 17662276
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| ||||||||  ||  || | ||||||| ||| || |   ||||||||||||| |||||| |||| ||||||||||||||    
T  17662168 acgaaattttaaatgattaaacaatgcaagggtaaattgccaggattaacgattaaaggaaccaatttttaaacgaccccaaattgcaaggatgaaatac 17662267  T
Q  561 atatttaag 569  Q
    |||||||||    
T  17662268 atatttaag 17662276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 391 - 447
Target Start/End: Complemental strand, 46282251 - 46282195
Alignment:
Q  391 gggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcatta 447  Q
    ||||||||||||| ||||||||||||||||||||||||||||| || ||||| ||||    
T  46282251 gggtatttttgtcaattcccatgccattttgctaatttgatgacgtggcagtgatta 46282195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 391 - 447
Target Start/End: Complemental strand, 49093221 - 49093165
Alignment:
Q  391 gggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcatta 447  Q
    ||||||||||||| ||||||||||||||||||||||||||||| || ||||| ||||    
T  49093221 gggtatttttgtcaattcccatgccattttgctaatttgatgacgtggcagtgatta 49093165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 391 - 447
Target Start/End: Original strand, 49093733 - 49093789
Alignment:
Q  391 gggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcatta 447  Q
    ||||||||||||| ||||||||||||||||||||||||||||| || ||||| ||||    
T  49093733 gggtatttttgtcaattcccatgccattttgctaatttgatgacgtggcagtgatta 49093789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 493 - 570
Target Start/End: Original strand, 40439539 - 40439616
Alignment:
Q  493 tagtttacaaggattagcgaatacaaagaccaatttttaaatgacccct-aattacaaggatgaaatacatatttaagt 570  Q
    |||||| ||||||||||||||||||  || ||||||||||| ||||| | |||| ||||||||||||||||||||||||    
T  40439539 tagtttgcaaggattagcgaatacat-gatcaatttttaaacgacccattaattgcaaggatgaaatacatatttaagt 40439616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 461 - 567
Target Start/End: Complemental strand, 1103571 - 1103463
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaat--ttttaaatgacccctaattacaaggatgaaat 558  Q
    |||||||||||||| |||||| ||||||||  ||  || | ||||||||||| ||||  |||||||  ||||||| |||| |||||| ||| ||||||||    
T  1103571 acgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcgattacagggaccaatatttttaaacgacctctaattgcaaagatgaaat 1103472  T
Q  559 acatattta 567  Q
    |||||||||    
T  1103471 acatattta 1103463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 388 - 453
Target Start/End: Complemental strand, 13295318 - 13295253
Alignment:
Q  388 tgagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcggg 453  Q
    |||||||||||||||| ||| ||||| ||||||||||||||||||| || ||||| ||||| ||||    
T  13295318 tgagggtatttttgtctatttccatgtcattttgctaatttgatgacgtggcagtgattaaccggg 13295253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 461 - 562
Target Start/End: Complemental strand, 14879081 - 14878980
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| ||||||||  ||  || | | ||||||||| ||||   ||||||||||||| ||||||||||| ||||||| ||||||    
T  14879081 acgaaattttaaatgattaaacaatgcaagggtaaattgccaagattagcgattacatgaaccaatttttaaacgacccctaattgcaaggataaaatac 14878982  T
Q  561 at 562  Q
    ||    
T  14878981 at 14878980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #98
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 520 - 569
Target Start/End: Complemental strand, 35152394 - 35152345
Alignment:
Q  520 gaccaatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    |||||||||||||| |||| |||||| |||||||||||||||||||||||    
T  35152394 gaccaatttttaaacgacctctaattgcaaggatgaaatacatatttaag 35152345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #99
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 391 - 447
Target Start/End: Complemental strand, 50062383 - 50062327
Alignment:
Q  391 gggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcatta 447  Q
    ||||||||||||| ||||||||| ||||||||||||||||||| || ||||| ||||    
T  50062383 gggtatttttgtcaattcccatgtcattttgctaatttgatgacgtggcagtgatta 50062327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #100
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 391 - 433
Target Start/End: Original strand, 50062868 - 50062910
Alignment:
Q  391 gggtatttttgtccattcccatgccattttgctaatttgatga 433  Q
    ||||||||||||| |||| ||||||||||||||||||||||||    
T  50062868 gggtatttttgtcaattctcatgccattttgctaatttgatga 50062910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #101
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 524 - 569
Target Start/End: Original strand, 6518177 - 6518222
Alignment:
Q  524 aatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    |||||||||| ||||||||||| ||||||||||||| |||||||||    
T  6518177 aatttttaaacgacccctaattgcaaggatgaaatatatatttaag 6518222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #102
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 464 - 545
Target Start/End: Complemental strand, 48691255 - 48691174
Alignment:
Q  464 aaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaatt 545  Q
    ||||||||||| || || || ||||||  |||||| |||| |||| ||||||||  |||||||||||||| |||||||||||    
T  48691255 aaattttaaatgatcaatgattgcaaggttagtttgcaagaattaacgaatacagcgaccaatttttaaacgacccctaatt 48691174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #103
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 438 - 552
Target Start/End: Complemental strand, 24905300 - 24905186
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  |||| ||| || ||||||||||| |||||  | |||||| |||  || ||||||||||| | ||||  ||| ||||||||||||||    
T  24905300 gcagtgattaagttggtccaaggaccaaattttaaatgattaacaattgcaaggctaaattgcaaggattagcaattacagggacgaatttttaaatgac 24905201  T
Q  538 ccctaattacaagga 552  Q
     ||||||| ||||||    
T  24905200 gcctaattgcaagga 24905186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #104
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 495 - 569
Target Start/End: Complemental strand, 51015709 - 51015635
Alignment:
Q  495 gtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    |||| |||||||||| || | ||| |||||||||||||| |||||||| || || |||| || ||||||||||||    
T  51015709 gtttgcaaggattagtgattgcaaggaccaatttttaaacgacccctatttgcagggatcaattacatatttaag 51015635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 88; Significance: 6e-42; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 393 - 568
Target Start/End: Complemental strand, 20035 - 19860
Alignment:
Q  393 gtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagac 492  Q
    ||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||   ||| || |||||||||||||||| ||||||||||||||       
T  20035 gtatttttgtccattcccatgccattttgctaatttgatgacgtgacagtcattaattaggttaatgaacgaaattttaaatgattaaagaatgcaaagg 19936  T
Q  493 tagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaa 568  Q
    || ||| |||||||||||||  |||  |||||||||||||| ||||| ||||| |||||| |||||||||||||||    
T  19935 taatttgcaaggattagcgatcacagggaccaatttttaaacgacccataattgcaaggacgaaatacatatttaa 19860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 86; Significance: 1e-40; HSPs: 61)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 389 - 562
Target Start/End: Complemental strand, 7160986 - 7160813
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    |||||||||||||||||||||||||| |||||||||||||||||| || | ||| ||||||  |||||||| |||||||||||||| |||||| ||||||    
T  7160986 gagggtatttttgtccattcccatgctattttgctaatttgatgacgtggtagtgattaagttggtcaaaggacgaaattttaaatgattaaacaatgca 7160887  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    ||| ||  || | ||||||||||| |||| |||| |||||||||||||| ||||||| |||||| |||| ||||    
T  7160886 agagtaaattgccaggattagcgattacagagactaatttttaaatgacgcctaattgcaaggacgaaacacat 7160813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 388 - 569
Target Start/End: Complemental strand, 8089626 - 8089445
Alignment:
Q  388 tgagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgc 487  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||  | ||||||||| |||| || | |||||||||||||| |||||| |||||    
T  8089626 tgagggtatttttgtccattcccatgccattttgttaatttgatgacgtgtcggtcattaagtgggttaagggacgaaattttaaatgattaaacaatgc 8089527  T
Q  488 aagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    |||  || ||| ||||||||| ||| || |  |||||||||||||| ||||||||||| || ||| | ||||||||||||||    
T  8089526 aagggtaatttgcaaggattaacgattatagggaccaatttttaaacgacccctaattgcagggaggtaatacatatttaag 8089445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 389 - 562
Target Start/End: Original strand, 22503018 - 22503191
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| || ||||| ||||||  |||||||  |||||| ||||||| |||||| ||||||    
T  22503018 gagggtatttttgtccattcccatgtcattttgctaatttgatgacgtggcagtgattaagttggtcaaatgacgaaaatttaaatgattaaacaatgca 22503117  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    ||  ||  || | ||||||||||| ||||| ||| |||||||||||||| ||||||| |||||| |||| ||||    
T  22503118 aggataaattgccaggattagcgattacaaggactaatttttaaatgacgcctaattgcaaggacgaaacacat 22503191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 390 - 569
Target Start/End: Complemental strand, 20651191 - 20651012
Alignment:
Q  390 agggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaa 489  Q
    |||| ||||||||||||||||||||||||||||||||||||||| || ||||| |||||  ||    | | |||||||||||||| ||||| || |||||    
T  20651191 agggcatttttgtccattcccatgccattttgctaatttgatgacgtggcagttattaactggactcatggacgaaattttaaatgattaatgattgcaa 20651092  T
Q  490 gactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    | || |||| ||||||||||||||||||   ||||||||||||| || |||||||| || |||| |||||||||||||||    
T  20651091 ggctggtttgcaaggattagcgaatacaggaaccaatttttaaacgatccctaattgcagggatcaaatacatatttaag 20651012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 438 - 569
Target Start/End: Original strand, 30726054 - 30726185
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  |||||||| |||||||||||||| ||||| || | |||| ||||||| ||||||||||||||||||  |||||||||||||| |||    
T  30726054 gcagtgattaagttggtcaaaggacgaaattttaaatgattaatgatttcaaggctagtttgcaaggattagcgaatacagggaccaatttttaaacgac 30726153  T
Q  538 ccctaattacaaggatgaaatacatatttaag 569  Q
    |||||||| |||||||||||||||||||||||    
T  30726154 ccctaattgcaaggatgaaatacatatttaag 30726185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 438 - 569
Target Start/End: Original strand, 33517829 - 33517960
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  |||||||| |||||||||||||| ||||| || |||||| ||| ||| ||||||||||||||||||  |||||||||||||| |||    
T  33517829 gcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaaggctactttgcaaggattagcgaatacagggaccaatttttaaacgac 33517928  T
Q  538 ccctaattacaaggatgaaatacatatttaag 569  Q
    |||||||| |||||||||||||||||||||||    
T  33517929 ccctaattgcaaggatgaaatacatatttaag 33517960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 439 - 569
Target Start/End: Original strand, 12080932 - 12081062
Alignment:
Q  439 cagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacc 538  Q
    |||| ||||||  |||||||| |||||||||||||| ||||| || |||||||||||||| ||||||||||||||||||  ||| |||||||||| |||     
T  12080932 cagtaattaagttggtcaaaggacgaaattttaaatgattaatgattgcaagactagtttgcaaggattagcgaatacagggacaaatttttaaacgact 12081031  T
Q  539 cctaattacaaggatgaaatacatatttaag 569  Q
    ||||||| |||||||||||||||||||||||    
T  12081032 cctaattgcaaggatgaaatacatatttaag 12081062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 389 - 562
Target Start/End: Complemental strand, 6517684 - 6517512
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||  | | ||| ||||||  |||||||| |||||||||||||| |||||| ||||||    
T  6517684 gaggctatttttgttcattcccatgccattttgctaatttgatgacttggtagtgattaagttggtcaaaggacgaaattttaaatgattaaacaatgca 6517585  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    ||  ||  || | ||||||||||| ||||||||| |||||||||||||| ||||||| |||||| |||| ||||    
T  6517584 ag-gtaaattgccaggattagcgattacaaagactaatttttaaatgacgcctaattgcaaggacgaaacacat 6517512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 389 - 550
Target Start/End: Complemental strand, 21836212 - 21836053
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||   ||||||| |||||||||||||| |||||| ||||||    
T  21836212 gagggtatttttgtccattcccatgccattttgctaatttgatgacgtggcagtgattaag-ttgtcaaaggacgaaattttaaatgattaaacaatgca 21836114  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaag 550  Q
    ||  ||  || | ||||||||||| ||| ||||| |||||||||||||| ||||||| ||||    
T  21836113 agggtaaattgccaggattagcgattac-aagactaatttttaaatgacgcctaattgcaag 21836053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 389 - 562
Target Start/End: Original strand, 21836274 - 21836447
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    |||| |||||||||||||||||||||||||||| |||||||||||  | ||||| ||||||  |||||||| |||||||||||||| |||||| ||||||    
T  21836274 gaggatatttttgtccattcccatgccattttgttaatttgatgacttggcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaatgca 21836373  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    ||  ||  ||   ||||||||||| |||||  || |||||||||||||| ||||||| ||||||||||| ||||    
T  21836374 agggtaaattgtcaggattagcgattacaagaactaatttttaaatgacgcctaattgcaaggatgaaacacat 21836447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 389 - 562
Target Start/End: Complemental strand, 22502956 - 22502783
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||  | ||||| ||||||  |||||||| |||||||||||||| |||||| ||||||    
T  22502956 gagggtatttttgtccattctcataccattttgctaatttgatgacttggcagttattaagttggtcaaaggacgaaattttaaatgattaaacaatgca 22502857  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    ||  ||  ||   ||||||||||| ||||| ||| |||||||||||||| ||||||| |||||| |||| ||||    
T  22502856 agggtaaattgtcaggattagcgattacaaggactaatttttaaatgacgcctaattgcaaggacgaaacacat 22502783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 452 - 569
Target Start/End: Original strand, 30337727 - 30337844
Alignment:
Q  452 ggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaagg 551  Q
    |||||||| |||||||||||||| ||||| || |||||| ||||||| ||||||||||||| ||||  |||||||||||||||||||||||||| |||||    
T  30337727 ggtcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgattacagggaccaatttttaaatgacccctaattgcaagg 30337826  T
Q  552 atgaaatacatatttaag 569  Q
    || |||||||||||||||    
T  30337827 atcaaatacatatttaag 30337844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 461 - 569
Target Start/End: Original strand, 681046 - 681154
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| ||||| || |||||| ||||||| |||||||||||||||||| ||||||||||||||| ||||||||||| ||||||| ||||||    
T  681046 acgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacagagaccaatttttaaacgacccctaattgcaaggatcaaatac 681145  T
Q  561 atatttaag 569  Q
    |||||||||    
T  681146 atatttaag 681154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 438 - 570
Target Start/End: Complemental strand, 11434935 - 11434803
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| |||||  ||||||||| |||||||||||||| ||||| || |||||| ||||||| ||| ||||||||||||||  |||||||||||||| |||    
T  11434935 gcagtgattaactgggtcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaacgattagcgaatacatggaccaatttttaaacgac 11434836  T
Q  538 ccctaattacaaggatgaaatacatatttaagt 570  Q
    || ||||| ||||||||||||||||||||||||    
T  11434835 ccttaattgcaaggatgaaatacatatttaagt 11434803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 438 - 569
Target Start/End: Original strand, 3059551 - 3059682
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  |||||||  | |||||||||||| ||||| || |||||| ||||||| ||||||||||||||||||  |||||||||||||| |||    
T  3059551 gcagtgattaagttggtcaaaagatgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacagggaccaatttttaaacgac 3059650  T
Q  538 ccctaattacaaggatgaaatacatatttaag 569  Q
    |||||||| |||||||||||||||||||||||    
T  3059651 ccctaattgcaaggatgaaatacatatttaag 3059682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 390 - 569
Target Start/End: Original strand, 13379729 - 13379908
Alignment:
Q  390 agggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaa 489  Q
    |||| |||||||||||||||||  ||||||||||||||||||||  |  |||| |||||  |||   | | |||||||||||||| ||||| || |||||    
T  13379729 agggcatttttgtccattcccaaaccattttgctaatttgatgacatgacagtaattaactgggctcagggacgaaattttaaatgattaatgattgcaa 13379828  T
Q  490 gactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    | ||||||| |||| |||||||||||||  |||||||||||||| ||||||||||| || |||| |||||||||||||||    
T  13379829 ggctagtttgcaagaattagcgaatacagggaccaatttttaaacgacccctaattgcagggatcaaatacatatttaag 13379908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 438 - 569
Target Start/End: Complemental strand, 21627846 - 21627715
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  |||||||| |||||||||||||| ||||| || |||||| ||||||| ||||||||||||||||||  || ||||||||||| ||     
T  21627846 gcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacatggatcaatttttaaacgat 21627747  T
Q  538 ccctaattacaaggatgaaatacatatttaag 569  Q
    || |||||||||||||||||||||||||||||    
T  21627746 ccttaattacaaggatgaaatacatatttaag 21627715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 389 - 552
Target Start/End: Original strand, 31407122 - 31407285
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||  |||| ||||||  |||||||| |||||||||||||| |||||| ||||||    
T  31407122 gagggtatttttgtccattcccatgtcattttgctaatttgatgacgtgacagtgattaagttggtcaaaggacgaaattttaaatgattaaacaatgca 31407221  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaagga 552  Q
    ||  ||  ||   ||||||||||| ||||  ||| |||||||||||||| ||||||| ||||||    
T  31407222 agggtaaattgtcaggattagcgattacagggactaatttttaaatgacgcctaattgcaagga 31407285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 461 - 569
Target Start/End: Complemental strand, 679976 - 679868
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| ||||| || |||||| ||||||| |||||||||||||||||| ||||||||||||||| ||||| ||||| ||||||| ||||||    
T  679976 acgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacagagaccaatttttaaacgacccttaattgcaaggatcaaatac 679877  T
Q  561 atatttaag 569  Q
    |||||||||    
T  679876 atatttaag 679868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 453 - 569
Target Start/End: Original strand, 33647261 - 33647377
Alignment:
Q  453 gtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaagga 552  Q
    ||||||| || ||||||||||| ||||| || ||||||  |||||| ||||||||||||||||||  |||||||||||||| ||||||||||| ||||||    
T  33647261 gtcaaaggactaaattttaaatgattaatgattgcaaggttagtttgcaaggattagcgaatacagggaccaatttttaaacgacccctaattgcaagga 33647360  T
Q  553 tgaaatacatatttaag 569  Q
    |||||||||||||||||    
T  33647361 tgaaatacatatttaag 33647377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 438 - 568
Target Start/End: Original strand, 30804156 - 30804286
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  |||||||| |||||||||||||| ||||| || |||||  ||||||| |||| |||||||||||||  || ||||||||||| |||    
T  30804156 gcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaacgctagtttgcaagaattagcgaatacagggatcaatttttaaacgac 30804255  T
Q  538 ccctaattacaaggatgaaatacatatttaa 568  Q
    |||||||| ||||||||||||||||||||||    
T  30804256 ccctaattgcaaggatgaaatacatatttaa 30804286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 389 - 562
Target Start/End: Complemental strand, 7905425 - 7905252
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    |||||||||||||||||||||| ||||||||||||||||||||||  |  | || ||||||  |||||||  |||||||||||||| |||||| ||||||    
T  7905425 gagggtatttttgtccattcccgtgccattttgctaatttgatgacttgacggtgattaagttggtcaaatgacgaaattttaaatgattaaataatgca 7905326  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    ||  ||  || | ||||||| ||| ||||| ||| |||||||||||||| ||||||| |||||| |||| ||||    
T  7905325 agggtaaattgccaggattaacgattacaaggactaatttttaaatgacgcctaattgcaaggacgaaacacat 7905252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 389 - 562
Target Start/End: Original strand, 7905487 - 7905660
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||  |||||||  ||||||||| |||| |||||| ||||||    
T  7905487 gagggtatttttgtccattcccatgccattttgctaatttgatgacgtggcagtgattaagttggtcaaatgacgaaatttgaaatgattaaacaatgca 7905586  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    ||  ||  || | || |||||||| || |  ||| ||||| |||||||| ||||||| |||||| |||| ||||    
T  7905587 agggtaaattgccagaattagcgattatagggacaaatttataaatgacacctaattgcaaggacgaaacacat 7905660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 389 - 562
Target Start/End: Original strand, 15913792 - 15913965
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||  |||| ||||||  |||||||| |||||||||||||| |||||| ||| ||    
T  15913792 gagggtatttttgtccattcccatgccattttgctaatttgatgacgtgacagtgattaagttggtcaaaggacgaaattttaaattattaaacaataca 15913891  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
     |  || ||| | | ||||| ||| || |  ||| |||||||||||||||| ||||| |||||| |||| ||||    
T  15913892 ggggtaattttccaagattaacgattatatggacaaatttttaaatgacccttaattgcaaggacgaaacacat 15913965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 452 - 569
Target Start/End: Complemental strand, 17734315 - 17734198
Alignment:
Q  452 ggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaagg 551  Q
    |||||||| |||||||||||||| ||||| || |||||| ||||||| ||||||||||| | |||||  ||||||||||||| ||||||||||| |||||    
T  17734315 ggtcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcaattacaagaaccaatttttaaacgacccctaattgcaagg 17734216  T
Q  552 atgaaatacatatttaag 569  Q
    || |||||||||||||||    
T  17734215 atcaaatacatatttaag 17734198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 389 - 562
Target Start/End: Complemental strand, 31407060 - 31406887
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    ||||||||||||||||||| |||||||||||||||||||||||||  | | ||| ||||||   ||||||| |||||||||||||| |||||| ||||||    
T  31407060 gagggtatttttgtccatttccatgccattttgctaatttgatgacttgggagtgattaagtttgtcaaaggacgaaattttaaatgattaaataatgca 31406961  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    ||   |  |||| ||||||| ||| ||||  ||| |||||||||||||| ||||||| |||||| |||| ||||    
T  31406960 aggacaaattaccaggattaacgattacagggactaatttttaaatgacgcctaattgcaaggacgaaacacat 31406887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 438 - 569
Target Start/End: Original strand, 11393099 - 11393230
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  |||||||  ||||||||| |||| ||||| || |||||| ||||||| |||||||||||||||||   |||||||||||||| |||    
T  11393099 gcagtgattaagttggtcaaatgacgaaatttgaaatgattaatgattgcaagtctagtttgcaaggattagcgaatacggggaccaatttttaaacgac 11393198  T
Q  538 ccctaattacaaggatgaaatacatatttaag 569  Q
    |||||||||||| ||||||||||||| |||||    
T  11393199 ccctaattacaaagatgaaatacatacttaag 11393230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 395 - 569
Target Start/End: Original strand, 20651899 - 20652073
Alignment:
Q  395 atttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagacta 494  Q
    |||||| |||||||||||| |||||||||||||| |||| || ||||| |||||  ||||  | | |||||||||||||| ||||| || |||||| ||     
T  20651899 atttttatccattcccatgtcattttgctaatttaatgacgtggcagtaattaactgggttcagggacgaaattttaaatgattaacgattgcaaggctg 20651998  T
Q  495 gtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    |||| |||||||||| |||||||  || ||||||||||| ||||| ||||| || | || |||||||||||||||    
T  20651999 gtttgcaaggattagtgaatacagggatcaatttttaaacgacccataattgcaggaattaaatacatatttaag 20652073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 389 - 553
Target Start/End: Original strand, 10781402 - 10781566
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||  | | ||| ||||||  ||||||||||| |||||||||||||||||| ||||||    
T  10781402 gaggatatttttgtccattcccatgccattttgcgaatttgatgacttggtagtgattaagttggtcaaagaacaaaattttaaataattaaacaatgca 10781501  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggat 553  Q
    ||  ||  ||   ||||||| ||| ||||| | | ||||||||||||||  || |||||||||||    
T  10781502 aggataaattgtcaggattaacgattacaatggctaatttttaaatgacatctcattacaaggat 10781566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 389 - 545
Target Start/End: Complemental strand, 15913730 - 15913574
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||  | | ||| ||||||  | |||||  |||||||||||||| |||||| ||||||    
T  15913730 gagggtatttttgtcaatttccatgccattttgctaatttgatgacttggtagtgattaagttgttcaaatgacgaaattttaaatgattaaacaatgca 15913631  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaatt 545  Q
    ||  ||  |||| || |||||| | ||||||||| |||||||||||||| |||||||    
T  15913630 agggtaaattaccagaattagcaattacaaagactaatttttaaatgacgcctaatt 15913574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 461 - 568
Target Start/End: Complemental strand, 33517644 - 33517537
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| ||||||||  ||  || | ||||||||||| ||||  |||||||||||||| || |||||||||||||||||||||||    
T  33517644 acgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcgattacagggaccaatttttaaacgatccctaattacaaggatgaaatac 33517545  T
Q  561 atatttaa 568  Q
    ||||||||    
T  33517544 atatttaa 33517537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 464 - 569
Target Start/End: Original strand, 8090248 - 8090353
Alignment:
Q  464 aaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacata 563  Q
    ||||||||||| ||||||   ||||||  || ||| |||||||||| |||||||| |||||||||||||| ||||||||||| |||||||| ||||||||    
T  8090248 aaattttaaatgattaaactttgcaagggtaatttgcaaggattagtgaatacaaggaccaatttttaaacgacccctaattgcaaggatgtaatacata 8090347  T
Q  564 tttaag 569  Q
    ||||||    
T  8090348 tttaag 8090353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 464 - 569
Target Start/End: Complemental strand, 12407615 - 12407510
Alignment:
Q  464 aaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacata 563  Q
    ||||||||||| ||||||   ||| ||| || |||||||||||||||||||||| ||||||||||||||| || || |||||  ||||||||||||||||    
T  12407615 aaattttaaatgattaaactttgctagagtaatttacaaggattagcgaatacagagaccaatttttaaacgatccttaattgtaaggatgaaatacata 12407516  T
Q  564 tttaag 569  Q
    ||||||    
T  12407515 tttaag 12407510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 389 - 481
Target Start/End: Complemental strand, 12065402 - 12065310
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaa 481  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |  |||| ||||||  ||||||||  ||||||||||||| ||||||    
T  12065402 gagggtatttttgtccattcccatgccattttgctaatttgatgacctgacagtgattaagttggtcaaaggtcgaaattttaaatgattaaa 12065310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 467 - 565
Target Start/End: Original strand, 15116556 - 15116654
Alignment:
Q  467 ttttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatt 565  Q
    |||||||| ||||||   |||||| ||||||| ||||||||||||| ||| | |||||||||||||| ||||||||||| |||||| ||||||||||||    
T  15116556 ttttaaatgattaaactttgcaaggctagtttgcaaggattagcgattacgaggaccaatttttaaacgacccctaattgcaaggacgaaatacatatt 15116654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 464 - 569
Target Start/End: Original strand, 12408492 - 12408597
Alignment:
Q  464 aaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacata 563  Q
    ||||||||||| ||||||   ||||||  || ||| ||||||||||||||||||| |||||| |||||||  ||||||||||  ||||||||||||||||    
T  12408492 aaattttaaatgattaaactttgcaaggataatttgcaaggattagcgaatacaaggaccaacttttaaacaacccctaattgtaaggatgaaatacata 12408591  T
Q  564 tttaag 569  Q
    ||||||    
T  12408592 tttaag 12408597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 461 - 569
Target Start/End: Complemental strand, 30337559 - 30337451
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||  ||||||||  ||  || | ||||||||||| ||||  |||||||||||||| ||||||||||| ||||||| ||||||    
T  30337559 acgaaattttaaatgattaaccaatgcaagggtaaattgccaggattagcgattacagggaccaatttttaaacgacccctaattgcaaggatcaaatac 30337460  T
Q  561 atatttaag 569  Q
    |||||||||    
T  30337459 atatttaag 30337451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 392 - 559
Target Start/End: Original strand, 7161051 - 7161218
Alignment:
Q  392 ggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaaga 491  Q
    ||||||||||||||||||||||| ||||||||||||||||||  |    || ||||||  |||||||  |||||||||||||| |||||| ||||||||     
T  7161051 ggtatttttgtccattcccatgcaattttgctaatttgatgacttgatggtgattaagttggtcaaatgacgaaattttaaatgattaaacaatgcaagg 7161150  T
Q  492 ctagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaata 559  Q
     ||  ||   |||||||| || || |  ||| |||||||||||||| ||||||| |||||| ||||||    
T  7161151 gtaaattgtcaggattagtgattatagggactaatttttaaatgacgcctaattgcaaggacgaaata 7161218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 423 - 569
Target Start/End: Complemental strand, 15115487 - 15115341
Alignment:
Q  423 taatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagac 522  Q
    ||||||||||| || | ||| |||||| ||||  ||| || ||||||||||| ||||||   |||||| ||| ||| ||||||||| ||| || |  |||    
T  15115487 taatttgatgacgtggtagtaattaagtgggtgtaaggactaaattttaaatgattaaactttgcaaggctaatttgcaaggattaacgattatagggac 15115388  T
Q  523 caatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    ||||||||||| || | |||||| |||||||||||||||||||||||    
T  15115387 caatttttaaacgatctctaattgcaaggatgaaatacatatttaag 15115341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 391 - 448
Target Start/End: Original strand, 4117467 - 4117524
Alignment:
Q  391 gggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaa 448  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| ||||| |||||    
T  4117467 gggtatttttgtcaattcccatgccattttgctaatttgatgatgtggcagtgattaa 4117524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 464 - 569
Target Start/End: Original strand, 21628034 - 21628139
Alignment:
Q  464 aaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacata 563  Q
    ||||||||||| |||||| ||||||||  ||  ||   ||||||||||| ||||  |||||||||||||  ||||||||||| |||||||||||||||||    
T  21628034 aaattttaaatgattaaacaatgcaagggtaaattgtcaggattagcgattacagggaccaatttttaagcgacccctaattgcaaggatgaaatacata 21628133  T
Q  564 tttaag 569  Q
    ||||||    
T  21628134 tttaag 21628139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 461 - 569
Target Start/End: Complemental strand, 26463289 - 26463181
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| ||||||   ||||||  || ||| | ||||||| ||||||||  |||||||||||||| ||||||||||| || |||| ||||||    
T  26463289 acgaaattttaaatgattaaactttgcaagggtaatttgccaggattaacgaatacagggaccaatttttaaacgacccctaattgcagggatcaaatac 26463190  T
Q  561 atatttaag 569  Q
    |||||||||    
T  26463189 atatttaag 26463181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 451 - 568
Target Start/End: Complemental strand, 22618004 - 22617886
Alignment:
Q  451 gggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagacc-aatttttaaatgacccctaattacaa 549  Q
    ||||||| | |||| ||||||||| |||||    ||||||  |||| | ||||||||||||||| || ||||| |||||||||| ||| ||||||| |||    
T  22618004 gggtcaatggacgacattttaaatgattaatatttgcaagggtagtctgcaaggattagcgaatgcagagacccaatttttaaacgactcctaattgcaa 22617905  T
Q  550 ggatgaaatacatatttaa 568  Q
    |||||||||||||||||||    
T  22617904 ggatgaaatacatatttaa 22617886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 461 - 569
Target Start/End: Complemental strand, 12080746 - 12080638
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| |||||| |  ||  || | | ||||||||| ||||  || ||||||||||| ||||||||||| ||||||||||||||    
T  12080746 acgaaattttaaatgattaaacaatgcaggggtaaattgccatgattagcgattacagggagcaatttttaaacgacccctaattgcaaggatgaaatac 12080647  T
Q  561 atatttaag 569  Q
    | |||||||    
T  12080646 aaatttaag 12080638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 391 - 447
Target Start/End: Original strand, 14657129 - 14657185
Alignment:
Q  391 gggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcatta 447  Q
    ||||||||||||| ||||||||||||||||||||||||||||| || ||||| ||||    
T  14657129 gggtatttttgtcaattcccatgccattttgctaatttgatgacgtggcagtgatta 14657185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 461 - 569
Target Start/End: Complemental strand, 30725869 - 30725762
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| | ||||||  ||  ||   ||||||||||| |||| ||||||||||||||| || |||||||| |||| |||||||||    
T  30725869 acgaaattttaaatgattaaacagtgcaagggtaaattggcaggattagcgattacagagaccaatttttaaacga-ccctaattgcaagaatgaaatac 30725771  T
Q  561 atatttaag 569  Q
    |||||||||    
T  30725770 atatttaag 30725762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 391 - 447
Target Start/End: Complemental strand, 33400146 - 33400090
Alignment:
Q  391 gggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcatta 447  Q
    ||||||||||||| ||||||||||||||||||||||||||||| || ||||| ||||    
T  33400146 gggtatttttgtcaattcccatgccattttgctaatttgatgacgtggcagtgatta 33400090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 461 - 568
Target Start/End: Complemental strand, 3059367 - 3059260
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| ||||||||  ||  || | ||||||||||| ||||  ||| |  ||||||| ||||| ||||| ||||||||||||||    
T  3059367 acgaaattttaaatgattaaacaatgcaagggtaaattgctaggattagcgattacatggacaatattttaaacgacccttaattgcaaggatgaaatac 3059268  T
Q  561 atatttaa 568  Q
    ||||||||    
T  3059267 atatttaa 3059260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 502 - 569
Target Start/End: Original strand, 26464558 - 26464625
Alignment:
Q  502 aggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    ||||||| | ||||||  ||||| |||||||||||||||||||| || ||||||||||||||||||||    
T  26464558 aggattaacaaatacagggaccattttttaaatgacccctaattgcagggatgaaatacatatttaag 26464625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 461 - 568
Target Start/End: Complemental strand, 30803971 - 30803864
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| |||| |||  ||  || | ||||||| ||| |||| ||| ||||||||||| ||| |||| || ||||||||||||||    
T  30803971 acgaaattttaaatgattaaacaatgtaagggtaaattgccaggattaacgattacatagatcaatttttaaacgacacctagttgcaaggatgaaatac 30803872  T
Q  561 atatttaa 568  Q
    ||||||||    
T  30803871 atatttaa 30803864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 391 - 448
Target Start/End: Complemental strand, 4116979 - 4116922
Alignment:
Q  391 gggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaa 448  Q
    ||||||||||||| ||||||| ||||||||||||||||||| |||| ||||| |||||    
T  4116979 gggtatttttgtcaattcccacgccattttgctaatttgataatgtggcagtgattaa 4116922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 493 - 565
Target Start/End: Original strand, 28498375 - 28498447
Alignment:
Q  493 tagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatt 565  Q
    |||||| | ||||||||||| ||||| ||||||||||||||||| |||||||| || ||| |||| |||||||    
T  28498375 tagtttgccaggattagcgattacaaggaccaatttttaaatgagccctaattgcagggacgaaacacatatt 28498447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 391 - 433
Target Start/End: Original strand, 1661350 - 1661392
Alignment:
Q  391 gggtatttttgtccattcccatgccattttgctaatttgatga 433  Q
    ||||||||||||| ||||||||||||||||| |||||||||||    
T  1661350 gggtatttttgtcaattcccatgccattttgataatttgatga 1661392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 461 - 543
Target Start/End: Complemental strand, 11392948 - 11392866
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaa 543  Q
    |||||||||||||| |||||| ||||||||  ||  |||  ||||||||||| ||||| |||||||||||||| ||| |||||    
T  11392948 acgaaattttaaatgattaaacaatgcaagggtaaattattaggattagcgattacaaggaccaatttttaaacgactcctaa 11392866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 391 - 433
Target Start/End: Complemental strand, 14656660 - 14656618
Alignment:
Q  391 gggtatttttgtccattcccatgccattttgctaatttgatga 433  Q
    ||||||||||||| |||||||||||||||| ||||||||||||    
T  14656660 gggtatttttgtcaattcccatgccattttactaatttgatga 14656618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 464 - 569
Target Start/End: Original strand, 17734484 - 17734589
Alignment:
Q  464 aaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacata 563  Q
    ||||||||||| |||||| ||||||||  ||  ||   ||||||||||| ||||  || ||||||||||| ||||| |||||  |||||| |||||||||    
T  17734484 aaattttaaatgattaaacaatgcaagggtaaattgataggattagcgattacatggatcaatttttaaacgacccataattgtaaggatcaaatacata 17734583  T
Q  564 tttaag 569  Q
    ||||||    
T  17734584 tttaag 17734589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 391 - 442
Target Start/End: Original strand, 33401045 - 33401097
Alignment:
Q  391 gggtatttttgtccattcccatgcca-ttttgctaatttgatgatgtagcagt 442  Q
    ||||||||||||| |||||||||||| ||||||||||||||||| || |||||    
T  33401045 gggtatttttgtcaattcccatgccatttttgctaatttgatgacgtggcagt 33401097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 514 - 557
Target Start/End: Complemental strand, 24210588 - 24210545
Alignment:
Q  514 tacaaagaccaatttttaaatgacccctaattacaaggatgaaa 557  Q
    |||| |||||||||||||||||||||||||||||| ||| ||||    
T  24210588 tacagagaccaatttttaaatgacccctaattacagggacgaaa 24210545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 391 - 426
Target Start/End: Original strand, 33400874 - 33400909
Alignment:
Q  391 gggtatttttgtccattcccatgccattttgctaat 426  Q
    ||||||||||||| ||||||||||||||||||||||    
T  33400874 gggtatttttgtcaattcccatgccattttgctaat 33400909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 505 - 570
Target Start/End: Original strand, 8418398 - 8418462
Alignment:
Q  505 attagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaagt 570  Q
    |||||||| |||||  ||||||||||||| ||  ||||||| |||||||| |||||||||||||||    
T  8418398 attagcgattacaagaaccaatttttaaacgattcctaattgcaaggatg-aatacatatttaagt 8418462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 504 - 565
Target Start/End: Original strand, 29810797 - 29810858
Alignment:
Q  504 gattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatt 565  Q
    |||||| || ||||| ||||||||||||||||| |||||||| || ||| |||| |||||||    
T  29810797 gattagtgattacaaggaccaatttttaaatgagccctaattgcagggacgaaacacatatt 29810858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0775 (Bit Score: 82; Significance: 2e-38; HSPs: 2)
Name: scaffold0775
Description:

Target: scaffold0775; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 392 - 565
Target Start/End: Original strand, 6227 - 6400
Alignment:
Q  392 ggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaaga 491  Q
    ||||||||||||| |||| |||||| |||||||||||||||| || |||||||||||| |||| || |||||||||||||||| |||||| | ||||||     
T  6227 ggtatttttgtcctttcctatgccactttgctaatttgatgacgtggcagtcattaagtgggttaaggaacgaaattttaaatgattaaacattgcaagg 6326  T
Q  492 ctagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatt 565  Q
     || ||| ||||||||| ||| || || ||||||||||||| |||||||||||| |||||| |||| |||||||    
T  6327 gtaatttgcaaggattatcgattataaggaccaatttttaagtgacccctaatttcaaggaagaaacacatatt 6400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0775; HSP #2
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 391 - 569
Target Start/End: Complemental strand, 5142 - 4964
Alignment:
Q  391 gggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaag 490  Q
    |||||||||||||| || ||||| ||||||||||||||||||| || ||||  |||||   |||||||| |||||||||||||| |||||  | ||||||    
T  5142 gggtatttttgtccttttccatgtcattttgctaatttgatgacgtggcagcgattaattaggtcaaaggacgaaattttaaatgattaataattgcaag 5043  T
Q  491 actagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
     ||||||| |||||||||||||||| |  || ||||||||||| |||||||||||  | ||||||||||||||||||||    
T  5042 gctagtttgcaaggattagcgaatatagggatcaatttttaaacgacccctaattgtagggatgaaatacatatttaag 4964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 82; Significance: 2e-38; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 389 - 562
Target Start/End: Original strand, 11384 - 11557
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||  |||||||  |||||||||||||| |||||| ||||||    
T  11384 gagggtatttttgtccattcccatgccattttgctaatttgatgacgtggcagtgattaagttggtcaaaagacgaaattttaaatgattaaacaatgca 11483  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    ||  ||  || | ||||||| ||| ||||  ||| |||||||||||||| ||||||| ||||||||||| ||||    
T  11484 agggtaaattgccaggattaacgattacatggactaatttttaaatgacgcctaattgcaaggatgaaacacat 11557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 389 - 490
Target Start/End: Complemental strand, 11322 - 11221
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    |||||||||||||||||||||||||||||||||||||||||||||  | ||||| ||||||  |||||||| |||||||||||||| |||||| ||||||    
T  11322 gagggtatttttgtccattcccatgccattttgctaatttgatgacttggcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaatgca 11223  T
Q  489 ag 490  Q
    ||    
T  11222 ag 11221  T

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Target: scaffold0388 (Bit Score: 75; Significance: 4e-34; HSPs: 2)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 392 - 562
Target Start/End: Original strand, 12486 - 12656
Alignment:
Q  392 ggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaaga 491  Q
    |||||||||||| ||||||||| ||||||||||||||||||| || ||||| ||||||  ||||||||||||||||||||||| |||||| ||||||||     
T  12486 ggtatttttgtctattcccatgtcattttgctaatttgatgacgtggcagtgattaagtaggtcaaagaacgaaattttaaatgattaaacaatgcaagg 12585  T
Q  492 ctagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
     ||  || | ||||||| ||| ||||  ||| |||||||||||||| ||||||| |||||| |||| ||||    
T  12586 gtaaattgccaggattaacgattacagggactaatttttaaatgacgcctaattgcaaggacgaaacacat 12656  T

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Target: scaffold0388; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 389 - 490
Target Start/End: Complemental strand, 12421 - 12321
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    |||| |||||||||||||| ||||| |||||||||||||||||||  | | ||| ||| ||   ||||||| |||||||||||||| |||||| ||||||    
T  12421 gaggatatttttgtccatttccatgtcattttgctaatttgatgacttgggagtgatttagtttgtcaaag-acgaaattttaaatgattaaacaatgca 12323  T
Q  489 ag 490  Q
    ||    
T  12322 ag 12321  T

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Target: scaffold0707 (Bit Score: 74; Significance: 1e-33; HSPs: 1)
Name: scaffold0707
Description:

Target: scaffold0707; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 452 - 569
Target Start/End: Original strand, 6388 - 6505
Alignment:
Q  452 ggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaagg 551  Q
    |||||||| |||||||||||||| ||||| || |||||| ||| ||| ||||||||||||||||||  |||||||||||||| ||||||||||| |||||    
T  6388 ggtcaaaggacgaaattttaaatgattaatgattgcaaggctactttgcaaggattagcgaatacagggaccaatttttaaacgacccctaattgcaagg 6487  T
Q  552 atgaaatacatatttaag 569  Q
    ||||||||||||||||||    
T  6488 atgaaatacatatttaag 6505  T

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Target: scaffold0771 (Bit Score: 71; Significance: 9e-32; HSPs: 1)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 388 - 562
Target Start/End: Complemental strand, 1103 - 929
Alignment:
Q  388 tgagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgc 487  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |  |||| ||||||  |||||||| |||||||||||||| |||||| |||||    
T  1103 tgagggtatttttgtccattcccatgccattttgctaatttgatgacttgacagtgattaagttggtcaaaggacgaaattttaaatgattaaacaatgc 1004  T
Q  488 aagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    |||  ||  || | | ||||||||| ||||  ||| |||||||||||||  ||||||| |||||| |||| ||||    
T  1003 aagggtaaattgccaagattagcgattacatggactaatttttaaatgatgcctaattgcaaggacgaaacacat 929  T

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Target: scaffold0006 (Bit Score: 71; Significance: 9e-32; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 388 - 550
Target Start/End: Complemental strand, 221972 - 221812
Alignment:
Q  388 tgagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgc 487  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| || ||||| ||||||   ||||||| |||||||||||||| |||||| |||||    
T  221972 tgagggtatttttgttcattcccatgccattttgctaatttgatgacgtggcagtgattaag-ttgtcaaaggacgaaattttaaatgattaaacaatgc 221874  T
Q  488 aagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaag 550  Q
    |||  ||  || | ||||||||||| ||| ||||| |||||||||||||| ||||||| ||||    
T  221873 aagggtaaattgccaggattagcgattac-aagactaatttttaaatgacgcctaattgcaag 221812  T

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Target: scaffold0006; HSP #2
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 389 - 562
Target Start/End: Original strand, 222033 - 222206
Alignment:
Q  389 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgca 488  Q
    ||||||||||||||||||||||||||||||||| |||||||||||  | ||||| ||||||  |||||||| |||||||||||||| |||||| ||||||    
T  222033 gagggtatttttgtccattcccatgccattttgttaatttgatgacttggcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaatgca 222132  T
Q  489 agactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    ||  ||  ||   ||||||||||| ||||   || |||||||||||||| ||||||| |||||| |||| ||||    
T  222133 agggtaaattgtcaggattagcgattacatgtactaatttttaaatgacgcctaattgcaaggacgaaacacat 222206  T

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Target: scaffold0031 (Bit Score: 68; Significance: 6e-30; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 438 - 569
Target Start/End: Original strand, 69260 - 69391
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  ||| |||| |||||||||||||| ||||| || |||||| ||||||| ||||||||||||||||||  |||||||||||||| |||    
T  69260 gcagtgattaagttggttaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatacagggaccaatttttaaacgac 69359  T
Q  538 ccctaattacaaggatgaaatacatatttaag 569  Q
      |||||| |||||||||||||||||||||||    
T  69360 atctaattgcaaggatgaaatacatatttaag 69391  T

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Target: scaffold0031; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 461 - 569
Target Start/End: Complemental strand, 69075 - 68967
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| ||||||||  ||  || | |||||||| || ||||  |||||||||||||||||||||||||| ||||||||||||||    
T  69075 acgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagtgattacagggaccaatttttaaatgacccctaattgcaaggatgaaatac 68976  T
Q  561 atatttaag 569  Q
    |||||||||    
T  68975 atatttaag 68967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 67; Significance: 2e-29; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 431 - 569
Target Start/End: Complemental strand, 37704 - 37566
Alignment:
Q  431 tgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaattttt 530  Q
    |||||| ||||| ||||||  |||||||| |||||||||||||| ||||| || ||||||| |||||| | || |||||||||||||| |||||||||||    
T  37704 tgatgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaagaatagtttgctagaattagcgaatacaaggaccaattttt 37605  T
Q  531 aaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    ||| || | |||||| ||||||||||||| |||||||||    
T  37604 aaacgatctctaattgcaaggatgaaatatatatttaag 37566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 461 - 569
Target Start/End: Original strand, 37881 - 37989
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| ||| ||||  ||  ||   ||||||||||| |||||||||||||||||||| ||| ||||||| ||||||||||||||    
T  37881 acgaaattttaaatgattaaacaatacaagggtaaattgtcaggattagcgattacaaagaccaatttttaaacgactcctaattgcaaggatgaaatac 37980  T
Q  561 atatttaag 569  Q
    |||||||||    
T  37981 atatttaag 37989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 65; Significance: 3e-28; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 394 - 562
Target Start/End: Complemental strand, 2570 - 2402
Alignment:
Q  394 tatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagact 493  Q
    |||||||||||||||||||||||||||||||||||||| | || | ||| ||||||  |||||||| |||||||||||||| |||||| ||||||||  |    
T  2570 tatttttgtccattcccatgccattttgctaatttgataacgtggtagtgattaagttggtcaaaggacgaaattttaaatgattaaacaatgcaagggt 2471  T
Q  494 agtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacat 562  Q
    |  || | ||||||||||| ||||  ||  ||||||||||||||  |||||| |||||| |||| ||||    
T  2470 aaattgctaggattagcgattacagggattaatttttaaatgacgtctaattgcaaggacgaaacacat 2402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 63; Significance: 5e-27; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 438 - 568
Target Start/End: Original strand, 139936 - 140066
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  |||||||| || ||||||||||||||||| || |||||| ||||||| |||| ||||| |||||||  ||||||||||||||  ||    
T  139936 gcagttattaagttggtcaaaggactaaattttaaataattaatgattgcaaggctagtttgcaagaattagtgaatacagggaccaatttttaaacaac 140035  T
Q  538 ccctaattacaaggatgaaatacatatttaa 568  Q
    |||||||| ||||||| ||||||||||||||    
T  140036 ccctaattgcaaggatcaaatacatatttaa 140066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 502 - 568
Target Start/End: Complemental strand, 139741 - 139675
Alignment:
Q  502 aggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaa 568  Q
    ||||||||||| ||||  |||||||||||||| ||||||||||| ||||||| ||||||||||||||    
T  139741 aggattagcgattacagggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaa 139675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 61; Significance: 8e-26; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 394 - 490
Target Start/End: Original strand, 12029 - 12125
Alignment:
Q  394 tatttttgtccattcccatgccattttgctaatttgatgatgtagcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaag 490  Q
    ||||||||||||||| |||||||||||||||||||||||| || ||||| ||||||  |||||||| |||||||||||||| |||||| ||||||||    
T  12029 tatttttgtccattctcatgccattttgctaatttgatgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaatgcaag 12125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 60; Significance: 3e-25; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 438 - 569
Target Start/End: Complemental strand, 14562 - 14431
Alignment:
Q  438 gcagtcattaagcgggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgac 537  Q
    ||||| ||||||  |||||||  || ||||||||||| ||||| || |||||| ||||||| |||||||||||||||| | |||| |||||||||| |||    
T  14562 gcagtgattaagttggtcaaaagacaaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaataaatagactaatttttaaacgac 14463  T
Q  538 ccctaattacaaggatgaaatacatatttaag 569  Q
     ||||||| ||| |||||||||||||||||||    
T  14462 tcctaattgcaatgatgaaatacatatttaag 14431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 502 - 569
Target Start/End: Original strand, 14749 - 14816
Alignment:
Q  502 aggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    ||||||||||| || | ||||||||||||||| ||||||||||| |||||||||||| ||||||||||    
T  14749 aggattagcgattagagagaccaatttttaaacgacccctaattgcaaggatgaaattcatatttaag 14816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 58; Significance: 5e-24; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 452 - 569
Target Start/End: Original strand, 2050 - 2167
Alignment:
Q  452 ggtcaaagaacgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaagg 551  Q
    ||||||||||||||||||||||| ||||| || ||||||  |||||| ||| ||||||| | | ||  |||||||||||||| ||||||||||| |||||    
T  2050 ggtcaaagaacgaaattttaaatgattaatgattgcaaggatagtttgcaaagattagcaatttcagggaccaatttttaaacgacccctaattgcaagg 2149  T
Q  552 atgaaatacatatttaag 569  Q
    || |||||||||||||||    
T  2150 atcaaatacatatttaag 2167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 461 - 569
Target Start/End: Complemental strand, 1879 - 1771
Alignment:
Q  461 acgaaattttaaataattaaagaatgcaagactagtttacaaggattagcgaatacaaagaccaatttttaaatgacccctaattacaaggatgaaatac 560  Q
    |||||||||||||| |||||| ||||||||  ||  || | | ||||||||| ||||  ||||||||||| || ||||||||||| ||||||| ||||||    
T  1879 acgaaattttaaatgattaaacaatgcaagggtaaattgccaagattagcgattacagggaccaattttttaacgacccctaattgcaaggatcaaatac 1780  T
Q  561 atatttaag 569  Q
    |||||||||    
T  1779 atatttaag 1771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 519 - 569
Target Start/End: Original strand, 2505 - 2555
Alignment:
Q  519 agaccaatttttaaatgacccctaattacaaggatgaaatacatatttaag 569  Q
    ||||||||||| ||| || |||||||| |||| ||||||||||||||||||    
T  2505 agaccaattttaaaacgatccctaattgcaagaatgaaatacatatttaag 2555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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