View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2591_low_18 (Length: 222)
Name: NF2591_low_18
Description: NF2591
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2591_low_18 |
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Alignment Details
Target: chr6 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 34898959 - 34899175
Alignment:
| Q |
1 |
aagaaagaccttccttaaagggggtcgaaaattgttgatccactttccatgacctaatcttgccatccttatggccagtccagaccatcttattcccgtt |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34898959 |
aagaaagaccttccttaaagggggtcgaaaattgttgatccactttccatgacctaatcttgccatccttatggccagtccagaccatcttattcccgtt |
34899058 |
T |
|
| Q |
101 |
gtcgacggtcaaacaaaatgtaggagaggtatcagcagattcataaaaaggcgcagcgtcctcatctcccctcctaacccttcctcccagaccgcaaccg |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34899059 |
gtcgacggtcaaacaaaatgtaggagaggtatcagcagattcataaaaaggtgcagcgtcctcatctcccctcctaacccttcctcccagaccgcaaccg |
34899158 |
T |
|
| Q |
201 |
tgttcataggccctttg |
217 |
Q |
| |
|
|||||||||||| |||| |
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| T |
34899159 |
tgttcataggccttttg |
34899175 |
T |
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