View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2592_low_16 (Length: 271)
Name: NF2592_low_16
Description: NF2592
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2592_low_16 |
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Alignment Details
Target: chr5 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 18 - 264
Target Start/End: Original strand, 27912997 - 27913243
Alignment:
| Q |
18 |
gtggtgatgaccaccgtcattgttgaagaacatggcccgtcattgctatctctaaagcacaatcctcctctataaattcttggaatgatgatgctttgat |
117 |
Q |
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| T |
27912997 |
gtggtgatgaccaccgtcattgttgaagaacatggcccgtcattgctatctctaaagcacaatcctcctctataaattcttggaatgatgatgctttgat |
27913096 |
T |
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| Q |
118 |
gcagagatacaaacgagtgttcttcatcttggcttaaactttttcatcacattaagaagcaaattcctcaccactttcatctaaacaccatattgctttg |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27913097 |
gcagagatacaaacgagtgttcttcatcttggcttaaactttttcatcacattaagaagcaaattcctcaccactttcatctaaacaccatattgctttg |
27913196 |
T |
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| Q |
218 |
atagcatgttacaaatcacaagatcaaacatatgaagattcatctca |
264 |
Q |
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| T |
27913197 |
atagcatgttacaaatcacaagatcaaacatatgaagattcatctca |
27913243 |
T |
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