View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2593_low_15 (Length: 293)
Name: NF2593_low_15
Description: NF2593
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2593_low_15 |
 | |
|
| [»] scaffold0067 (1 HSPs) |
| | |
|
| [»] scaffold0043 (1 HSPs) |
| | |
|
| [»] scaffold0912 (1 HSPs) |
| | |
|
Alignment Details
Target: chr5 (Bit Score: 180; Significance: 3e-97; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 20 - 283
Target Start/End: Original strand, 26027920 - 26028183
Alignment:
| Q |
20 |
acatcccactcttcgcgacgttgttcacccttcaaactactggctatagcagcaattgcaattggtaaccttttgcattcatttgcaattttacatccct |
119 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||| ||||||||||| || | |
|
|
| T |
26027920 |
acatcccactcttcccgacgttgttcacccttcaaactactggctataacagcaattgcaattgttaacattttgcattcatatgcaattttacggcctt |
26028019 |
T |
|
| Q |
120 |
tttcgagaaaaattttagttgaagttttgcttagaccagcatgcctttggaacatgatccatgcgtcttcttcagataagagatccagttggattgtctt |
219 |
Q |
| |
|
||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| |
|
|
| T |
26028020 |
tttcgagcaaatttttagttgaagttttgcttagaccggcatgcctttggaacatgatccatgtgtcttcttcagataagagatctagttggattgtctt |
26028119 |
T |
|
| Q |
220 |
actgcatcctaatctgttgcacaccaacagattgcgcgtggttacaagtattctacagcctttg |
283 |
Q |
| |
|
||| | |||||||||||||||||||||||||||| | ||||||||| ||| ||||||||||| |
|
|
| T |
26028120 |
actacgacctaatctgttgcacaccaacagattgcaggcggttacaagaattttacagcctttg |
26028183 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 166; Significance: 7e-89; HSPs: 27)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 22 - 283
Target Start/End: Complemental strand, 11407613 - 11407352
Alignment:
| Q |
22 |
atcccactcttcgcgacgttgttcacccttcaaactactggctatagcagcaattgcaattggtaaccttttgcattcatttgcaattttacatcccttt |
121 |
Q |
| |
|
|||||| ||||| ||| ||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||| |||||| |
|
|
| T |
11407613 |
atcccattcttctcgatgtttctcacccttcaaactactggctgtaacagcaattgcaattggtaaccttttgcattcagttgcaattttacggcccttt |
11407514 |
T |
|
| Q |
122 |
tcgagaaaaattttagttgaagttttgcttagaccagcatgcctttggaacatgatccatgcgtcttcttcagataagagatccagttggattgtcttac |
221 |
Q |
| |
|
|||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| || |||||||||||||| |
|
|
| T |
11407513 |
aagagaaaaaatttagatgaaattttgcttagaccagcatgcctttggaacatgatccacgcatcttcttcagataagagatgcaattggattgtcttac |
11407414 |
T |
|
| Q |
222 |
tgcatcctaatctgttgcacaccaacagattgcgcgtggttacaagtattctacagcctttg |
283 |
Q |
| |
|
|||||| ||||||||||||||| || ||||||||||||| |||||| ||||||||||||||| |
|
|
| T |
11407413 |
tgcatcttaatctgttgcacactaagagattgcgcgtgggtacaagaattctacagcctttg |
11407352 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 20 - 283
Target Start/End: Complemental strand, 27961689 - 27961426
Alignment:
| Q |
20 |
acatcccactcttcgcgacgttgttcacccttcaaactactggctatagcagcaattgcaattggtaaccttttgcattcatttgcaattttacatccct |
119 |
Q |
| |
|
|||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||| |
|
|
| T |
27961689 |
acatcccactcttcccgacgttgtttgcccttcaaactactggctatagcagcaattgcaactggtaaccttttgcattcatttgaaattttacggccct |
27961590 |
T |
|
| Q |
120 |
tttcgagaaaaattttagttgaagttttgcttagaccagcatgcctttggaacatgatccatgcgtcttcttcagataagagatccagttggattgtctt |
219 |
Q |
| |
|
||||||| ||| |||||||||| ||| |||||| ||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||| || |
|
|
| T |
27961589 |
tttcgagcaaatctttagttgaaacttttcttagatcagcatgcctttggaacatcatccacgcgtcttctacagataagagatccagttggattgtttt |
27961490 |
T |
|
| Q |
220 |
actgcatcctaatctgttgcacaccaacagattgcgcgtggttacaagtattctacagcctttg |
283 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||| ||||||| ||| |||| ||| |||||| |
|
|
| T |
27961489 |
actgcatcctaatctgttgcacaccaacttattgcgagtggttataagaattcgacaacctttg |
27961426 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 23 - 283
Target Start/End: Complemental strand, 28176845 - 28176585
Alignment:
| Q |
23 |
tcccactcttcgcgacgttgttcacccttcaaactactggctatagcagcaattgcaattggtaaccttttgcattcatttgcaattttacatccctttt |
122 |
Q |
| |
|
||||||||||| |||||||| ||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| || |||| |
|
|
| T |
28176845 |
tcccactcttccggacgttgtatgcccttcaaactgctggcgatagcagcaattgcaatcggtaaccttttgcattcatttgcaattttacgcccttttt |
28176746 |
T |
|
| Q |
123 |
cgagaaaaattttagttgaagttttgcttagaccagcatgcctttggaacatgatccatgcgtcttcttcagataagagatccagttggattgtcttact |
222 |
Q |
| |
|
| || | | ||||||||||| ||| ||| |||||||||||||||| |||||||||||||||||||||||||||||| ||||| ||||| ||||||||||| |
|
|
| T |
28176745 |
caagcagatttttagttgaaatttcgctaagaccagcatgccttttgaacatgatccatgcgtcttcttcagataacagatcgagttgcattgtcttact |
28176646 |
T |
|
| Q |
223 |
gcatcctaatctgttgcacaccaacagattgcgcgtggttacaagtattctacagcctttg |
283 |
Q |
| |
|
||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||| |
|
|
| T |
28176645 |
gcatcctaatctgttacacaccaagagattgcgcgtggttacaagaattctacagcctttg |
28176585 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 23 - 280
Target Start/End: Complemental strand, 28078222 - 28077965
Alignment:
| Q |
23 |
tcccactcttcgcgacgttgttcacccttcaaactactggctatagcagcaattgcaattggtaaccttttgcattcatttgcaattttacatccctttt |
122 |
Q |
| |
|
||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| | ||||| | |
|
|
| T |
28078222 |
tcccactcttccggacgttgtatgcccttcaaactactggcgatagcagcaattgcaattggcaaccttttgcattcatttgcaatttttcggcccttgt |
28078123 |
T |
|
| Q |
123 |
cgagaaaaattttagttgaagttttgcttagaccagcatgcctttggaacatgatccatgcgtcttcttcagataagagatccagttggattgtcttact |
222 |
Q |
| |
|
| | ||| |||| |||||| ||| || |||||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
28078122 |
caatcaaatttttggttgaaatttcgcgtagaccggcatgtctttcgaacatgatccatgcgtcttcttcagataagagatccagttgaattgtcttact |
28078023 |
T |
|
| Q |
223 |
gcatcctaatctgttgcacaccaacagattgcgcgtggttacaagtattctacagcct |
280 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||| |
|
|
| T |
28078022 |
gcatcctaatctgttgcacaccaagagattgcgagtggttacaagaattctacagcct |
28077965 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 47 - 276
Target Start/End: Original strand, 28473635 - 28473864
Alignment:
| Q |
47 |
cccttcaaactactggctatagcagcaattgcaattggtaaccttttgcattcatttgcaattttacatcccttttcgagaaaaattttagttgaagttt |
146 |
Q |
| |
|
||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||| || || ||| ||||||||||| ||| |
|
|
| T |
28473635 |
cccttcaaactactggcgataacagcaattgcaattggtaaccctttgcattcatttgcaattttacggcccttgtcaagcaaacttttagttgaaattt |
28473734 |
T |
|
| Q |
147 |
tgcttagaccagcatgcctttggaacatgatccatgcgtcttcttcagataagagatccagttggattgtcttactgcatcctaatctgttgcacaccaa |
246 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||| ||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||||| || |
|
|
| T |
28473735 |
ctgttagaccagcatgcctttggaacatggtccatgcctcttcatcagataagagctccagttggattgtcttactgcatcttaatctgttgcacactaa |
28473834 |
T |
|
| Q |
247 |
cagattgcgcgtggttacaagtattctaca |
276 |
Q |
| |
|
|||||||||||||||||||| |||||||| |
|
|
| T |
28473835 |
gagattgcgcgtggttacaagaattctaca |
28473864 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 23 - 279
Target Start/End: Original strand, 17750634 - 17750890
Alignment:
| Q |
23 |
tcccactcttcgcgacgttgttcacccttcaaactactggctatagcagcaattgcaattggtaaccttttgcattcatttgcaattttacatccctttt |
122 |
Q |
| |
|
||||||||||| |||||||| ||||||||||| ||||| || ||||||||||||| ||||||||||||||||||||||||||||||| ||||| | |
|
|
| T |
17750634 |
tcccactcttccggacgttgtatccccttcaaactgctggcgatgacagcaattgcaataggtaaccttttgcattcatttgcaattttacggcccttgt |
17750733 |
T |
|
| Q |
123 |
cgagaaaaattttagttgaagttttgcttagaccagcatgcctttggaacatgatccatgcgtcttcttcagataagagatccagttggattgtcttact |
222 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||| ||||||| |||| || ||||||||||||||||| || ||||||| ||| ||||| |
|
|
| T |
17750734 |
cgagaaaaattttagttgaatttttgcttagaccagcatgccttttgaacatggtccacgcatcttcttcagataagagctctagttggactgttttact |
17750833 |
T |
|
| Q |
223 |
gcatcctaatctgttgcacaccaacagattgcgcgtggttacaagtattctacagcc |
279 |
Q |
| |
|
|||| ||||| |||| |||||||||| | |||| ||||||| ||| ||||||||||| |
|
|
| T |
17750834 |
gcattctaatttgttacacaccaacatactgcgtgtggttataagaattctacagcc |
17750890 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 23 - 279
Target Start/End: Original strand, 19051954 - 19052210
Alignment:
| Q |
23 |
tcccactcttcgcgacgttgttcacccttcaaactactggctatagcagcaattgcaattggtaaccttttgcattcatttgcaattttacatccctttt |
122 |
Q |
| |
|
||||||||||| |||||||| ||||||||||| ||||| || ||||||||||||| ||||||||||||||||||||||||||||||| ||||| | |
|
|
| T |
19051954 |
tcccactcttccggacgttgtatccccttcaaactgctggcgatgacagcaattgcaataggtaaccttttgcattcatttgcaattttacggcccttgt |
19052053 |
T |
|
| Q |
123 |
cgagaaaaattttagttgaagttttgcttagaccagcatgcctttggaacatgatccatgcgtcttcttcagataagagatccagttggattgtcttact |
222 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||| ||||||| |||| || ||||||||||||||||| || ||||||| ||| ||||| |
|
|
| T |
19052054 |
cgagaaaaattttagttgaatttttgcttagaccagcatgccttttgaacatggtccacgcatcttcttcagataagagctctagttggactgttttact |
19052153 |
T |
|
| Q |
223 |
gcatcctaatctgttgcacaccaacagattgcgcgtggttacaagtattctacagcc |
279 |
Q |
| |
|
|||| ||||| |||| |||||||||| | |||| ||||||| ||| ||||||||||| |
|
|
| T |
19052154 |
gcattctaatttgttacacaccaacatactgcgtgtggttataagaattctacagcc |
19052210 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 21 - 283
Target Start/End: Original strand, 28514628 - 28514890
Alignment:
| Q |
21 |
catcccactcttcgcgacgttgttcacccttcaaactactggctatagcagcaattgcaattggtaaccttttgcattcatttgcaattttacatccctt |
120 |
Q |
| |
|
||||||||||||| || ||||| ||||||||||||||||| ||| ||| ||||||||||||||||| ||||||||||||||||||||||| ||||| |
|
|
| T |
28514628 |
catcccactcttccggatgttgtatgcccttcaaactactggcgataacagaaattgcaattggtaaccctttgcattcatttgcaattttacggccctt |
28514727 |
T |
|
| Q |
121 |
ttcgagaaaaattttagttgaagttttgcttagaccagcatgcctttggaacatgatccatgcgtcttcttcagataagagatccagttggattgtctta |
220 |
Q |
| |
|
|| || ||| ||||||||||| ||| |||||||||||||||||||||||||| ||||||| ||||| ||||||||||| |||||||||||||||||| |
|
|
| T |
28514728 |
gtcaagcaaacttttagttgaaatttctgttagaccagcatgcctttggaacatggtccatgcctcttcatcagataagagctccagttggattgtctta |
28514827 |
T |
|
| Q |
221 |
ctgcatcctaatctgttgcacaccaacagattgcgcgtggttacaagtattctacagcctttg |
283 |
Q |
| |
|
||||||| |||| |||||||||| | ||| |||| ||||||||||| | | ||||||||||| |
|
|
| T |
28514828 |
ctgcatcttaatttgttgcacactgagagactgcgtgtggttacaagaactatacagcctttg |
28514890 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 47 - 283
Target Start/End: Complemental strand, 27908589 - 27908353
Alignment:
| Q |
47 |
cccttcaaactactggctatagcagcaattgcaattggtaaccttttgcattcatttgcaattttacatcccttttcgagaaaaattttagttgaagttt |
146 |
Q |
| |
|
|||||||||||||| || ||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||| | || ||| ||||||||||| ||| |
|
|
| T |
27908589 |
cccttcaaactactagcgataacagcaattgcaattggtaaccctttgcattcatttgcaattttacggcccttggcaagcaaacttttagttgaaattt |
27908490 |
T |
|
| Q |
147 |
tgcttagaccagcatgcctttggaacatgatccatgcgtcttcttcagataagagatccagttggattgtcttactgcatcctaatctgttgcacaccaa |
246 |
Q |
| |
|
|||||||| ||||||||||||||||| ||||||| ||||| ||||||||||| |||||||||| ||||||||||||||||||| | |||||||| || |
|
|
| T |
27908489 |
ctgttagaccaacatgcctttggaacatggtccatgcctcttcatcagataagagctccagttggaatgtcttactgcatcctaatttcttgcacactaa |
27908390 |
T |
|
| Q |
247 |
cagattgcgcgtggttacaagtattctacagcctttg |
283 |
Q |
| |
|
||| |||||||||||| ||| ||||||||||||||| |
|
|
| T |
27908389 |
gagactgcgcgtggttataagaattctacagcctttg |
27908353 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 21 - 283
Target Start/End: Original strand, 27465660 - 27465922
Alignment:
| Q |
21 |
catcccactcttcgcgacgttgttcacccttcaaactactggctatagcagcaattgcaattggtaaccttttgcattcatttgcaattttacatccctt |
120 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||| ||| ||||||| ||||||||||| | |||||| |||||||||||||||| ||||| |
|
|
| T |
27465660 |
catcccactcttcaagacgttgttcacccttcaaactactggcaataacagcaatggcaattggtaatcctttgcactcatttgcaattttacggccctt |
27465759 |
T |
|
| Q |
121 |
ttcgagaaaaattttagttgaagttttgcttagaccagcatgcctttggaacatgatccatgcgtcttcttcagataagagatccagttggattgtctta |
220 |
Q |
| |
|
| ||| ||| |||| ||||| ||| |||||||||||||| |||| ||||||| |||||||||| | |||||||||||| || ||||| | |||| || |
|
|
| T |
27465760 |
gttgagcaaatatttatttgaaatttcacttagaccagcatgtcttttgaacatggtccatgcgtccttttcagataagagctctagttgaactgtccta |
27465859 |
T |
|
| Q |
221 |
ctgcatcctaatctgttgcacaccaacagattgcgcgtggttacaagtattctacagcctttg |
283 |
Q |
| |
|
|||||| ||||| ||||||||||| | | |||||| ||||||| ||| ||||||||||||||| |
|
|
| T |
27465860 |
ctgcattctaatttgttgcacaccgaaacattgcgtgtggttataagaattctacagcctttg |
27465922 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 49 - 283
Target Start/End: Complemental strand, 27950970 - 27950736
Alignment:
| Q |
49 |
cttcaaactactggctatagcagcaattgcaattggtaaccttttgcattcatttgcaattttacatcccttttcgagaaaaattttagttgaagttttg |
148 |
Q |
| |
|
||||||||||||||| ||| ||| ||||||||||||||| | |||||| |||||||||||| ||| ||||| ||||| ||| ||||||||||| ||||| |
|
|
| T |
27950970 |
cttcaaactactggcgataacagaaattgcaattggtaaacctttgcactcatttgcaattctacggcccttgtcgagcaaacttttagttgaaattttg |
27950871 |
T |
|
| Q |
149 |
cttagaccagcatgcctttggaacatgatccatgcgtcttcttcagataagagatccagttggattgtcttactgcatcctaatctgttgcacaccaaca |
248 |
Q |
| |
|
||||| ||||||||| |||||||||| ||||||| ||| | |||||||||| || ||||||||||||||||||||||| ||| ||||||| ||||| |
|
|
| T |
27950870 |
tttagatcagcatgccattggaacatggtccatgcctctccaacagataagagctcgagttggattgtcttactgcatcccaatttgttgcataccaagg |
27950771 |
T |
|
| Q |
249 |
gattgcgcgtggttacaagtattctacagcctttg |
283 |
Q |
| |
|
||||||| ||||||||||| ||||||||||||||| |
|
|
| T |
27950770 |
gattgcgagtggttacaagaattctacagcctttg |
27950736 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 21 - 283
Target Start/End: Complemental strand, 28046257 - 28045995
Alignment:
| Q |
21 |
catcccactcttcgcgacgttgttcacccttcaaactactggctatagcagcaattgcaattggtaaccttttgcattcatttgcaattttacatccctt |
120 |
Q |
| |
|
||||||||||||| || ||||| ||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||| ||||| |
|
|
| T |
28046257 |
catcccactcttccggatgttgtatgcccttcaaactactggcgataacagcaattgcaattggtaaccctttgcattcatttgcaattttacagccctt |
28046158 |
T |
|
| Q |
121 |
ttcgagaaaaattttagttgaagttttgcttagaccagcatgcctttggaacatgatccatgcgtcttcttcagataagagatccagttggattgtctta |
220 |
Q |
| |
|
||||| |||||||||| ||| ||| |||||||||||| ||||||||||||| ||||||| ||||| ||| |||||| | |||||||||||||||| |
|
|
| T |
28046157 |
gtcgagcaaaattttaggtgacatttcttttagaccagcatacctttggaacatggtccatgcttcttcatcatataagaccttcagttggattgtctta |
28046058 |
T |
|
| Q |
221 |
ctgcatcctaatctgttgcacaccaacagattgcgcgtggttacaagtattctacagcctttg |
283 |
Q |
| |
|
||||||||||||||||||| || | || ||||| ||||||| ||| |||||| || ||||| |
|
|
| T |
28046057 |
ttgcatcctaatctgttgcagacagagagtttgcgtgtggttataagaattctagagtctttg |
28045995 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 36 - 283
Target Start/End: Original strand, 27436050 - 27436297
Alignment:
| Q |
36 |
gacgttgttcacccttcaaactactggctatagcagcaattgcaattggtaaccttttgcattcatttgcaattttacatcccttttcgagaaaaatttt |
135 |
Q |
| |
|
||||||| |||||| | || ||||||||||||| |||||||||||||||||| | | |||||||||||| |||||||| ||||| || || ||| ||| |
|
|
| T |
27436050 |
gacgttgctcacccattaatctactggctatagtagcaattgcaattggtaatcctctgcattcatttgtaattttacgacccttgtcaagcaaactttg |
27436149 |
T |
|
| Q |
136 |
agttgaagttttgcttagaccagcatgcctttggaacatgatccatgcgtcttcttcagataagagatccagttggattgtcttactgcatcctaatctg |
235 |
Q |
| |
|
| ||||| ||| ||||||||||| |||||||||||||||||| || |||||||||||||||| |||||||||||||||||||||||||| |||||| |
|
|
| T |
27436150 |
atttgaaatttcacttagaccagcccacctttggaacatgatccaggcttcttcttcagataagaaatccagttggattgtcttactgcatcttaatctc |
27436249 |
T |
|
| Q |
236 |
ttgcacaccaacagattgcgcgtggttacaagtattctacagcctttg |
283 |
Q |
| |
|
|||||||| || | | ||| |||||||||||| ||||||||||||||| |
|
|
| T |
27436250 |
ttgcacactaagaaaatgcacgtggttacaagaattctacagcctttg |
27436297 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 47 - 283
Target Start/End: Complemental strand, 28128747 - 28128511
Alignment:
| Q |
47 |
cccttcaaactactggctatagcagcaattgcaattggtaaccttttgcattcatttgcaattttacatcccttttcgagaaaaattttagttgaagttt |
146 |
Q |
| |
|
||||||||||||||||| ||| || ||||||||| ||||| | ||||||||||||||||||||| | ||||| ||||| ||| || || ||| ||| |
|
|
| T |
28128747 |
cccttcaaactactggcgataacaacaattgcaaccggtaatcctttgcattcatttgcaattttgcggcccttgtcgagcaaacttgcaggtgacattt |
28128648 |
T |
|
| Q |
147 |
tgcttagaccagcatgcctttggaacatgatccatgcgtcttcttcagataagagatccagttggattgtcttactgcatcctaatctgttgcacaccaa |
246 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||| ||||| |||||||||| |||||||||||||||||| ||||||||||||||||||| || | |
|
|
| T |
28128647 |
cttttagaccagcatgcctttggaacatggtccatgcttcttcatcagataagacctccagttggattgtcttattgcatcctaatctgttgcagacata |
28128548 |
T |
|
| Q |
247 |
cagattgcgcgtggttacaagtattctacagcctttg |
283 |
Q |
| |
|
|||||||||||||||||||| ||||||||| ||||| |
|
|
| T |
28128547 |
gagattgcgcgtggttacaagaattctacagtctttg |
28128511 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 47 - 283
Target Start/End: Complemental strand, 28142678 - 28142442
Alignment:
| Q |
47 |
cccttcaaactactggctatagcagcaattgcaattggtaaccttttgcattcatttgcaattttacatcccttttcgagaaaaattttagttgaagttt |
146 |
Q |
| |
|
||||||||||||||||| ||| |||||||||||| |||||| | ||||||||||||||||||||||| ||||| ||||| ||| || ||| ||| ||| |
|
|
| T |
28142678 |
cccttcaaactactggcgataacagcaattgcaactggtaatcctttgcattcatttgcaattttacggcccttgtcgagcaaacttgtaggtgacattt |
28142579 |
T |
|
| Q |
147 |
tgcttagaccagcatgcctttggaacatgatccatgcgtcttcttcagataagagatccagttggattgtcttactgcatcctaatctgttgcacaccaa |
246 |
Q |
| |
|
|||||||||||||| ||||||||||| ||||||| ||||| |||||||||| |||||||||||| ||||| ||||||||||||||| ||| || | |
|
|
| T |
28142578 |
cttttagaccagcatgcgtttggaacatggtccatgcttcttcatcagataagacctccagttggattttcttattgcatcctaatctgtggcagacaga |
28142479 |
T |
|
| Q |
247 |
cagattgcgcgtggttacaagtattctacagcctttg |
283 |
Q |
| |
|
||| |||| ||||||||||| ||||||||| ||||| |
|
|
| T |
28142478 |
gagactgcgtgtggttacaagaattctacagtctttg |
28142442 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 21 - 283
Target Start/End: Complemental strand, 27997422 - 27997169
Alignment:
| Q |
21 |
catcccactcttcgcgacgttgttcacccttcaaactactggctatagcagcaattgcaattggtaaccttttgcattcatttgcaattttacatccctt |
120 |
Q |
| |
|
|||||||| |||| |||| ||||| |||||||||||||||||||||||| ||||||||| ||||| || |||||||||||||| ||| |||| ||||| |
|
|
| T |
27997422 |
catcccacacttctagacgatgttctcccttcaaactactggctatagcaacaattgcaactggtagccctttgcattcatttgaaatattacggccctt |
27997323 |
T |
|
| Q |
121 |
ttcgagaaaaattttagttgaagttttgcttagaccagcatgcctttggaacatgatccatgcgtcttcttcagataagagatccagttggattgtctta |
220 |
Q |
| |
|
||||| ||| ||||||||||| ||| ||| || ||||||||||||| ||||||| || || ||||||||| |||||||||| ||||||| |
|
|
| T |
27997322 |
gtcgagcaaacttttagttgaaattt---------cagaatacctttggaacatggtccatgcctcctcaacagataagacctccagttggactgtctta |
27997232 |
T |
|
| Q |
221 |
ctgcatcctaatctgttgcacaccaacagattgcgcgtggttacaagtattctacagcctttg |
283 |
Q |
| |
|
|||||| |||| |||||||||| || ||| |||| ||||||||||| ||||||||||||||| |
|
|
| T |
27997231 |
ttgcatcttaatgtgttgcacactaagagactgcgtgtggttacaagaattctacagcctttg |
27997169 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 43 - 267
Target Start/End: Original strand, 26146501 - 26146725
Alignment:
| Q |
43 |
ttcacccttcaaactactggctatagcagcaattgcaattggtaaccttttgcattcatttgcaattttacatcccttttcgagaaaaattttagttgaa |
142 |
Q |
| |
|
||||||||||||||| ||||| |||| ||||||||||| |||||| | |||||| ||| |||||||||||| |||||| || |||| | |||| | |||| |
|
|
| T |
26146501 |
ttcacccttcaaactgctggcgatagtagcaattgcaactggtaaacatttgcactcaattgcaattttacgtcccttatcaagaatacttttggatgaa |
26146600 |
T |
|
| Q |
143 |
gttttgcttagaccagcatgcctttggaacatgatccatgcgtcttcttcagataagagatccagttggattgtcttactgcatcctaatctgttgcaca |
242 |
Q |
| |
|
| || |||||| |||||||| ||| |||||||||||||||||||||||||| |||||| || ||||| |||||||| | ||||| | | ||||||| | |
|
|
| T |
26146601 |
ttgttacttagatcagcatgctttttgaacatgatccatgcgtcttcttcagttaagagctctagttgaattgtctttccacatcccattttgttgcata |
26146700 |
T |
|
| Q |
243 |
ccaacagattgcgcgtggttacaag |
267 |
Q |
| |
|
|| ||||||||| ||||||||||| |
|
|
| T |
26146701 |
cctccagattgcgtgtggttacaag |
26146725 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 47 - 113
Target Start/End: Original strand, 28493676 - 28493742
Alignment:
| Q |
47 |
cccttcaaactactggctatagcagcaattgcaattggtaaccttttgcattcatttgcaattttac |
113 |
Q |
| |
|
||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
28493676 |
cccttcaaactactggcgataacagcaattgcaattggtaaccctttgcattcatttgcaattttac |
28493742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 219
Target Start/End: Original strand, 26118478 - 26118679
Alignment:
| Q |
18 |
caacatcccactcttcgcgacgttgttcacccttcaaactactggctatagcagcaattgcaattggtaaccttttgcattcatttgcaattttacatcc |
117 |
Q |
| |
|
|||||||||||||||| |||| || || ||||||||||| ||||| ||| ||||||||||| |||||| ||||||||| | ||| |||| | | | |
|
|
| T |
26118478 |
caacatcccactcttcacgacttttttttcccttcaaacttctggcaataatagcaattgcaactggtaatcttttgcataaagttgtgatttcatgtac |
26118577 |
T |
|
| Q |
118 |
cttttcgagaaaaattttagttgaagttttgcttagaccagcatgcctttggaacatgatccatgcgtcttcttcagataagagatccagttggattgtc |
217 |
Q |
| |
|
||| |||||| | |||| | ||| | ||||||||| | |||| | ||| |||||||||| |||| |||||||||| |||||| |||||||| |||||| |
|
|
| T |
26118578 |
cttaccgagaatacttttggaggaaatattgcttagatcggcatacattttgaacatgatcaatgcttcttcttcagttaagagctccagttgaattgtc |
26118677 |
T |
|
| Q |
218 |
tt |
219 |
Q |
| |
|
|| |
|
|
| T |
26118678 |
tt |
26118679 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 219
Target Start/End: Original strand, 26240742 - 26240943
Alignment:
| Q |
18 |
caacatcccactcttcgcgacgttgttcacccttcaaactactggctatagcagcaattgcaattggtaaccttttgcattcatttgcaattttacatcc |
117 |
Q |
| |
|
|||||||||||||||| | || || || ||||||||||| ||||| ||| |||||||||||||||||| ||||||||| | ||| |||| || | | |
|
|
| T |
26240742 |
caacatcccactcttcaccacttttttttcccttcaaacttctggcgataatagcaattgcaattggtaatcttttgcataaagttgtgatttcacgtac |
26240841 |
T |
|
| Q |
118 |
cttttcgagaaaaattttagttgaagttttgcttagaccagcatgcctttggaacatgatccatgcgtcttcttcagataagagatccagttggattgtc |
217 |
Q |
| |
|
||| |||||| | |||| | ||| | | ||||||| | |||| | ||| |||||||||| |||| |||||||||| |||||| |||||||| |||||| |
|
|
| T |
26240842 |
cttaccgagaatacttttggaggaaatatggcttagatcggcatacatttcgaacatgatcaatgcttcttcttcagttaagagctccagttgaattgtc |
26240941 |
T |
|
| Q |
218 |
tt |
219 |
Q |
| |
|
|| |
|
|
| T |
26240942 |
tt |
26240943 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 216 - 276
Target Start/End: Original strand, 28499256 - 28499316
Alignment:
| Q |
216 |
tcttactgcatcctaatctgttgcacaccaacagattgcgcgtggttacaagtattctaca |
276 |
Q |
| |
|
|||||||||||| ||||||||||||||| || |||||||||||||||||||| |||||||| |
|
|
| T |
28499256 |
tcttactgcatcttaatctgttgcacactaagagattgcgcgtggttacaagaattctaca |
28499316 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 19 - 120
Target Start/End: Complemental strand, 27369112 - 27369011
Alignment:
| Q |
19 |
aacatcccactcttcgcgacgttgttcacccttcaaactactggctatagcagcaattgcaattggtaaccttttgcattcatttgcaattttacatccc |
118 |
Q |
| |
|
||||||||||||||| |||| || || ||||||||||| || || | || ||||||||||| |||||| | |||||||||| |||||||||||| |||| |
|
|
| T |
27369112 |
aacatcccactcttcacgacattcttgtcccttcaaactgctagcaacagtagcaattgcaactggtaaacatttgcattcagttgcaattttacgtccc |
27369013 |
T |
|
| Q |
119 |
tt |
120 |
Q |
| |
|
|| |
|
|
| T |
27369012 |
tt |
27369011 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 120
Target Start/End: Original strand, 18724634 - 18724731
Alignment:
| Q |
23 |
tcccactcttcgcgacgttgttcacccttcaaactactggctatagcagcaattgcaattggtaaccttttgcattcatttgcaattttacatccctt |
120 |
Q |
| |
|
||||||||||| || |||| || ||||||||||| || || | || ||||||||||| ||||| |||||||||||| |||||||||||| |||||| |
|
|
| T |
18724634 |
tcccactcttcacggcgtttttgtcccttcaaactgctagcaacagtagcaattgcaactggtagtcttttgcattcagttgcaattttacgtccctt |
18724731 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 72 - 126
Target Start/End: Complemental strand, 27342769 - 27342715
Alignment:
| Q |
72 |
caattgcaattggtaaccttttgcattcatttgcaattttacatcccttttcgag |
126 |
Q |
| |
|
||||||||||||||| |||||||||||| |||||||||||| |||||| ||||| |
|
|
| T |
27342769 |
caattgcaattggtagtcttttgcattcaattgcaattttacttcccttctcgag |
27342715 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 72 - 209
Target Start/End: Original strand, 18033066 - 18033203
Alignment:
| Q |
72 |
caattgcaattggtaaccttttgcattcatttgcaattttacatcccttttcgagaaaaattttagttgaagttttgcttagaccagcatgcctttggaa |
171 |
Q |
| |
|
|||||||||||||||| ||||||||| |||||||||||||||||||| || | | | ||| | ||| ||||||||| | | |||| || |||||| |
|
|
| T |
18033066 |
caattgcaattggtaattgtttgcattcctttgcaattttacatcccttatcaatcacatattttggggaacttttgcttatatcggcataccattggaa |
18033165 |
T |
|
| Q |
172 |
catgatccatgcgtcttcttcagataagagatccagtt |
209 |
Q |
| |
|
|||| |||| || || ||||||||||| || ||||||| |
|
|
| T |
18033166 |
catgttccacgcttcatcttcagataaaagctccagtt |
18033203 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 120
Target Start/End: Complemental strand, 26623270 - 26623221
Alignment:
| Q |
71 |
gcaattgcaattggtaaccttttgcattcatttgcaattttacatccctt |
120 |
Q |
| |
|
|||||||||| |||||| ||||||||| |||||||||||||||||||| |
|
|
| T |
26623270 |
gcaattgcaactggtaattgtttgcattcctttgcaattttacatccctt |
26623221 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 164 - 200
Target Start/End: Complemental strand, 27772044 - 27772008
Alignment:
| Q |
164 |
ctttggaacatgatccatgcgtcttcttcagataaga |
200 |
Q |
| |
|
|||| ||||||||||||||| |||||||||||||||| |
|
|
| T |
27772044 |
cttttgaacatgatccatgcatcttcttcagataaga |
27772008 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 149; Significance: 1e-78; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 23 - 283
Target Start/End: Original strand, 8695979 - 8696239
Alignment:
| Q |
23 |
tcccactcttcgcgacgttgttcacccttcaaactactggctatagcagcaattgcaattggtaaccttttgcattcatttgcaattttacatccctttt |
122 |
Q |
| |
|
||||||||||| |||||| | ||||||||||||||||| ||||||| |||||||||||| |||||||||||||||||||||||||| | ||||| | |
|
|
| T |
8695979 |
tcccactcttccggacgttctatgcccttcaaactactggcgatagcagtaattgcaattggcaaccttttgcattcatttgcaatttttcggcccttgt |
8696078 |
T |
|
| Q |
123 |
cgagaaaaattttagttgaagttttgcttagaccagcatgcctttggaacatgatccatgcgtcttcttcagataagagatccagttggattgtcttact |
222 |
Q |
| |
|
| || ||| ||||||||||| ||| | ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| || |
|
|
| T |
8696079 |
caagcaaatttttagttgaaatttcgtgtagaccagcatgccttttgaacatgatccatgcgtcttcttcagataagagatcgagttggattgtctttct |
8696178 |
T |
|
| Q |
223 |
gcatcctaatctgttgcacaccaacagattgcgcgtggttacaagtattctacagcctttg |
283 |
Q |
| |
|
||||||||||||||| |||||||| ||||| |||||||||||||| || |||||||||||| |
|
|
| T |
8696179 |
gcatcctaatctgttacacaccaagagattacgcgtggttacaagaatcctacagcctttg |
8696239 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0067 (Bit Score: 141; Significance: 6e-74; HSPs: 1)
Name: scaffold0067
Description:
Target: scaffold0067; HSP #1
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 47 - 283
Target Start/End: Complemental strand, 22759 - 22523
Alignment:
| Q |
47 |
cccttcaaactactggctatagcagcaattgcaattggtaaccttttgcattcatttgcaattttacatcccttttcgagaaaaattttagttgaagttt |
146 |
Q |
| |
|
|||| |||| ||||||||||| |||||||||||| ||||||||||||||||||||||||||||| || || |||| | ||| ||| | | ||||||| |
|
|
| T |
22759 |
ccctccaaattactggctataacagcaattgcaactggtaaccttttgcattcatttgcaatttcacggcctatttcaaacaaactttcattcgaagttt |
22660 |
T |
|
| Q |
147 |
tgcttagaccagcatgcctttggaacatgatccatgcgtcttcttcagataagagatccagttggattgtcttactgcatcctaatctgttgcacaccaa |
246 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
22659 |
tgcttaaaccagcatgcctttggaacatgatccacgcgtcttccttagataagagatccagttggattgtcttactgcatcctaatctgtagcacaccaa |
22560 |
T |
|
| Q |
247 |
cagattgcgcgtggttacaagtattctacagcctttg |
283 |
Q |
| |
|
| |||||||||||||||||| ||||||||||||||| |
|
|
| T |
22559 |
gatattgcgcgtggttacaagaattctacagcctttg |
22523 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 135; Significance: 2e-70; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 21 - 283
Target Start/End: Original strand, 9331555 - 9331817
Alignment:
| Q |
21 |
catcccactcttcgcgacgttgttcacccttcaaactactggctatagcagcaattgcaattggtaaccttttgcattcatttgcaattttacatccctt |
120 |
Q |
| |
|
||||||||||||| ||| |||| ||||||||||||||||| |||||||||||||||| |||||| |||||||||||||||||||||||| ||||| |
|
|
| T |
9331555 |
catcccactcttccggacattgtatgcccttcaaactactggcgatagcagcaattgcaactggtaaacttttgcattcatttgcaattttatggccctt |
9331654 |
T |
|
| Q |
121 |
ttcgagaaaaattttagttgaagttttgcttagaccagcatgcctttggaacatgatccatgcgtcttcttcagataagagatccagttggattgtctta |
220 |
Q |
| |
|
||||||||||||||||||||| ||| |||||||| ||||| |||| ||||||| |||| || ||||||||||||||||| || ||||||| ||||||| |
|
|
| T |
9331655 |
gtcgagaaaaattttagttgaaatttcgcttagacaagcataacttttgaacatggtccacgcatcttcttcagataagagctctagttggactgtctta |
9331754 |
T |
|
| Q |
221 |
ctgcatcctaatctgttgcacaccaacagattgcgcgtggttacaagtattctacagcctttg |
283 |
Q |
| |
|
|||||| ||||| ||||||||||||||| |||||| ||||||| ||| |||||||| |||||| |
|
|
| T |
9331755 |
ctgcattctaatttgttgcacaccaacatattgcgtgtggttataagaattctacaacctttg |
9331817 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 21 - 283
Target Start/End: Original strand, 9385338 - 9385600
Alignment:
| Q |
21 |
catcccactcttcgcgacgttgttcacccttcaaactactggctatagcagcaattgcaattggtaaccttttgcattcatttgcaattttacatccctt |
120 |
Q |
| |
|
||||||||||||| ||| |||| ||||||||||||||||| |||||||||||||||| |||||| |||||||||||||||||||||||| ||||| |
|
|
| T |
9385338 |
catcccactcttccggacattgtatgcccttcaaactactggcgatagcagcaattgcaactggtaaacttttgcattcatttgcaattttatggccctt |
9385437 |
T |
|
| Q |
121 |
ttcgagaaaaattttagttgaagttttgcttagaccagcatgcctttggaacatgatccatgcgtcttcttcagataagagatccagttggattgtctta |
220 |
Q |
| |
|
||||||||||||||||||||| ||| |||||||| ||||| |||| ||||||| |||| || ||||||||||||||||| || ||||||| ||||||| |
|
|
| T |
9385438 |
gtcgagaaaaattttagttgaaatttcgcttagacaagcataacttttgaacatggtccacgcatcttcttcagataagagctctagttggactgtctta |
9385537 |
T |
|
| Q |
221 |
ctgcatcctaatctgttgcacaccaacagattgcgcgtggttacaagtattctacagcctttg |
283 |
Q |
| |
|
|||||| ||||| ||||||||||||||| |||||| ||||||| ||| |||||||| |||||| |
|
|
| T |
9385538 |
ctgcattctaatttgttgcacaccaacatattgcgtgtggttataagaattctacaacctttg |
9385600 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0043 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0043
Description:
Target: scaffold0043; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 126
Target Start/End: Original strand, 74443 - 74546
Alignment:
| Q |
23 |
tcccactcttcgcgacgttgttcacccttcaaactactggctatagcagcaattgcaattggtaaccttttgcattcatttgcaattttacatccctttt |
122 |
Q |
| |
|
||||||||||| || |||| || ||||||||||| || || | || ||||||||||| ||||| |||||||||||| |||||||||||| |||||| | |
|
|
| T |
74443 |
tcccactcttcacggcgtttttgtcccttcaaactgctagcaacagtagcaattgcaactggtagtcttttgcattcagttgcaattttacgtcccttct |
74542 |
T |
|
| Q |
123 |
cgag |
126 |
Q |
| |
|
|||| |
|
|
| T |
74543 |
cgag |
74546 |
T |
|
Back To:
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Target: scaffold0912 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0912
Description:
Target: scaffold0912; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 120
Target Start/End: Original strand, 362 - 459
Alignment:
| Q |
23 |
tcccactcttcgcgacgttgttcacccttcaaactactggctatagcagcaattgcaattggtaaccttttgcattcatttgcaattttacatccctt |
120 |
Q |
| |
|
||||||||||| | |||| || ||||||||||| || || | || ||||||||||| ||||| |||||||||||| |||||||||||| |||||| |
|
|
| T |
362 |
tcccactcttcatggcgtttttgtcccttcaaactgctagcaacagtagcaattgcaactggtagtcttttgcattcagttgcaattttacgtccctt |
459 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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