View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2593_low_21 (Length: 269)
Name: NF2593_low_21
Description: NF2593
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2593_low_21 |
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Alignment Details
Target: chr1 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 8 - 252
Target Start/End: Original strand, 45748301 - 45748545
Alignment:
| Q |
8 |
cgaagaaaatgataccttttaatttgacagtgagaaatgtaaaaggacccaaaaacaaataggactgatgggttccacaggaaaagaaaaagttatggtt |
107 |
Q |
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| T |
45748301 |
cgaagaaaatgataccttttaatttgacagtgagaaatgtaaaaggacccaaaaacaaataggactgatgggttccacaggaaaagaaaaagttatggtt |
45748400 |
T |
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| Q |
108 |
tttattttcttttcaaaatgaaaattaaatttatggttgatgaatttgacggtagctgcatttaattttaataatggtgaaaatcatttattttgatttc |
207 |
Q |
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| T |
45748401 |
tttattttcttttcaaaatgaaaattaaatttatggttgatgaatttgacggtagctgcatttaattttaataatggtgaaaatcatttattttgatttc |
45748500 |
T |
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| Q |
208 |
aaaaaatcataaatattttcaattaaatcagcactagacatacat |
252 |
Q |
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| T |
45748501 |
aaaaaatcataaatattttcaattaaatcagcactagacatacat |
45748545 |
T |
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