View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2593_low_34 (Length: 237)
Name: NF2593_low_34
Description: NF2593
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2593_low_34 |
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Alignment Details
Target: chr1 (Bit Score: 157; Significance: 1e-83; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 47 - 221
Target Start/End: Complemental strand, 46845418 - 46845247
Alignment:
| Q |
47 |
ttatcaacaaaagaataagggtgtagctacatcaactttaccaattacctatgatagttaatatcaatttttatccttgaaatcctcctaatcccaaatt |
146 |
Q |
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| T |
46845418 |
ttatcaacaaaagaataagggtgtagctacatcaactttaccaattacctatgatagttattatcaatttttatccttgaaatcct---aatcccaaatt |
46845322 |
T |
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| Q |
147 |
ggtcctcttgatctaattctcctattattagagcaaaacttacatcaagtgtcgtgctcaatgccatgtacaatg |
221 |
Q |
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| T |
46845321 |
ggtcctcttgatctaattctcctattattagagcaaaacttacatcaagtgtcgtgctcaatgccatgtacaatg |
46845247 |
T |
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