View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2594_low_13 (Length: 305)

Name: NF2594_low_13
Description: NF2594
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2594_low_13
NF2594_low_13
[»] chr1 (10 HSPs)
chr1 (15-290)||(39758467-39758742)
chr1 (15-290)||(39763821-39764096)
chr1 (168-290)||(52705990-52706105)
chr1 (168-255)||(14389016-14389098)
chr1 (15-77)||(14389217-14389279)
chr1 (168-255)||(45535393-45535475)
chr1 (168-255)||(26882193-26882275)
chr1 (168-255)||(45319099-45319181)
chr1 (43-83)||(45535572-45535612)
chr1 (41-77)||(52706210-52706246)
[»] chr4 (9 HSPs)
chr4 (15-255)||(42315506-42315739)
chr4 (168-255)||(3435343-3435425)
chr4 (168-255)||(8583378-8583460)
chr4 (168-255)||(42217814-42217896)
chr4 (199-255)||(7820682-7820737)
chr4 (17-77)||(56398834-56398893)
chr4 (168-255)||(56398635-56398718)
chr4 (204-256)||(44930421-44930472)
chr4 (41-77)||(42217675-42217711)
[»] chr8 (16 HSPs)
chr8 (15-77)||(43489717-43489779)
chr8 (129-255)||(7148672-7148791)
chr8 (129-255)||(43489516-43489635)
chr8 (168-255)||(29259645-29259727)
chr8 (163-255)||(40264645-40264732)
chr8 (168-255)||(2113425-2113507)
chr8 (168-255)||(42275592-42275674)
chr8 (129-253)||(10795704-10795821)
chr8 (129-255)||(41386199-41386319)
chr8 (129-255)||(43604701-43604820)
chr8 (168-255)||(4655704-4655786)
chr8 (163-254)||(9458144-9458230)
chr8 (168-255)||(41964958-41965041)
chr8 (41-77)||(29259500-29259536)
chr8 (41-77)||(41386095-41386131)
chr8 (41-77)||(41964820-41964856)
[»] chr7 (15 HSPs)
chr7 (16-77)||(33475320-33475381)
chr7 (161-255)||(35089467-35089556)
chr7 (15-82)||(12252626-12252693)
chr7 (129-255)||(27417988-27418107)
chr7 (129-255)||(43057008-43057127)
chr7 (168-255)||(12252804-12252886)
chr7 (163-255)||(152490-152577)
chr7 (129-255)||(47912871-47912990)
chr7 (129-255)||(47913663-47913782)
chr7 (129-255)||(33475122-33475241)
chr7 (215-255)||(30111425-30111465)
chr7 (41-77)||(27417885-27417921)
chr7 (41-77)||(30111606-30111642)
chr7 (41-77)||(47913059-47913095)
chr7 (41-77)||(47913558-47913594)
[»] chr3 (20 HSPs)
chr3 (168-290)||(26556454-26556569)
chr3 (129-255)||(36054350-36054469)
chr3 (129-255)||(38629150-38629269)
chr3 (15-77)||(23754338-23754400)
chr3 (168-255)||(24150203-24150285)
chr3 (168-255)||(30589473-30589555)
chr3 (168-255)||(50899800-50899882)
chr3 (129-255)||(35731503-35731622)
chr3 (168-255)||(19551533-19551615)
chr3 (15-77)||(23697765-23697827)
chr3 (15-77)||(23716220-23716282)
chr3 (15-77)||(23734676-23734738)
chr3 (129-255)||(26005192-26005311)
chr3 (129-255)||(26292902-26293021)
chr3 (168-255)||(2125074-2125156)
chr3 (41-77)||(2124933-2124969)
chr3 (41-77)||(26292798-26292834)
chr3 (41-77)||(26556674-26556710)
chr3 (41-77)||(35731687-35731723)
chr3 (41-77)||(36054247-36054283)
[»] chr2 (9 HSPs)
chr2 (168-290)||(21736041-21736156)
chr2 (168-255)||(6288923-6289005)
chr2 (15-77)||(21735861-21735923)
chr2 (129-247)||(7487483-7487594)
chr2 (129-255)||(42626742-42626861)
chr2 (168-247)||(45547551-45547625)
chr2 (19-76)||(35171629-35171686)
chr2 (199-255)||(35172023-35172078)
chr2 (41-77)||(29941712-29941748)
[»] chr5 (4 HSPs)
chr5 (129-255)||(11633025-11633144)
chr5 (168-255)||(3603843-3603925)
chr5 (168-290)||(13950168-13950282)
chr5 (41-77)||(11632923-11632959)
[»] chr6 (4 HSPs)
chr6 (169-255)||(3109727-3109808)
chr6 (129-247)||(6476085-6476196)
chr6 (163-254)||(29865115-29865201)
chr6 (41-77)||(6475980-6476016)
[»] scaffold0237 (1 HSPs)
scaffold0237 (163-254)||(20810-20896)
[»] scaffold0153 (2 HSPs)
scaffold0153 (129-255)||(34147-34266)
scaffold0153 (41-77)||(34043-34079)
[»] scaffold0016 (2 HSPs)
scaffold0016 (129-255)||(81115-81234)
scaffold0016 (41-77)||(81011-81047)


Alignment Details
Target: chr1 (Bit Score: 149; Significance: 1e-78; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 15 - 290
Target Start/End: Complemental strand, 39758742 - 39758467
Alignment:
Q  15 atactattagatgtatagatcagttgccaaaaaatttcaacaacaaaagtacagttataaatcgatcggnnnnnnnnntgaatcaatgaacgtatagatt 114  Q
    ||||||||||||||||| |||| |||||||||||  |||| ||||||||||||  |||||||||| ||          |||||||||||||||||||| |    
T  39758742 atactattagatgtatatatca-ttgccaaaaaaactcaaaaacaaaagtacatatataaatcgaccgaaaaaaacaatgaatcaatgaacgtatagact 39758644  T
Q  115 attagatgatatagtactactagcaggttgactgatcttnnnnnnnttatgggcatatgatatcaaaataaatagacatacattaaaataagttatgtta 214  Q
    || ||||||||||||||||||||||||||| || |||||       ||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  39758643 atgagatgatatagtactactagcaggttgcctcatcttaaaaaaattatgggcatatgatatcaaaataaatagacatgcattaaaataagttatgtta 39758544  T
Q  215 agtttattcattataataatttgattgaaaaatacatgttattataggaagaaaaaa-caagaagaaaaattattat 290  Q
    ||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||||||||    
T  39758543 agtctattcattataataatttgattgaaaaatgcatgttattataggaagaaaaaagcaagtagaaaaattattat 39758467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 15 - 290
Target Start/End: Complemental strand, 39764096 - 39763821
Alignment:
Q  15 atactattagatgtatagatcagttgccaaaaaatttcaacaacaaaagtacagttataaatcgatcggnnnnnnnnntgaatcaatgaacgtatagatt 114  Q
    ||||||||||||||||| |||| |||||||||||  |||| ||||||||||||  |||||||||| ||          |||||||||||||||||||| |    
T  39764096 atactattagatgtatatatca-ttgccaaaaaaactcaaaaacaaaagtacatatataaatcgaccgaaaaaaacaatgaatcaatgaacgtatagact 39763998  T
Q  115 attagatgatatagtactactagcaggttgactgatcttnnnnnnnttatgggcatatgatatcaaaataaatagacatacattaaaataagttatgtta 214  Q
    || ||||||||||||||||||||||||||| || |||||       ||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  39763997 atgagatgatatagtactactagcaggttgcctcatcttaaaaaaattatgggcatatgatatcaaaataaatagacatgcattaaaataagttatgtta 39763898  T
Q  215 agtttattcattataataatttgattgaaaaatacatgttattataggaagaaaaaa-caagaagaaaaattattat 290  Q
    ||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||||||||    
T  39763897 agtctattcattataataatttgattgaaaaatgcatgttattataggaagaaaaaagcaagtagaaaaattattat 39763821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 168 - 290
Target Start/End: Complemental strand, 52706105 - 52705990
Alignment:
Q  168 catatgatatcaaaataaatagacatacattaaaataagttatgttaagtttattcattataataatttgattgaaaaatacatgttattataggaagaa 267  Q
    |||||||||||||||||||||||| ||    |||||||||||||||| ||||||| |||||||||||||||||||||||| ||||   ||||||| ||||    
T  52706105 catatgatatcaaaataaatagaccta----aaaataagttatgtta-gtttattgattataataatttgattgaaaaatgcatg---ttataggtagaa 52706014  T
Q  268 aaa-acaagaagaaaaattattat 290  Q
    |||  |||| ||||||||||||||    
T  52706013 aaatgcaagtagaaaaattattat 52705990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 168 - 255
Target Start/End: Complemental strand, 14389098 - 14389016
Alignment:
Q  168 catatgatatcaaaataaatagacatacattaaaataagttatgttaagtttattcattataataatttgattgaaaaatacatgtta 255  Q
    |||||||||||||||||||||||| ||    |||||||||||||||| ||||||| |||||||||||||||||||||||| |||||||    
T  14389098 catatgatatcaaaataaatagaccta----aaaataagttatgtta-gtttattgattataataatttgattgaaaaatgcatgtta 14389016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 14389279 - 14389217
Alignment:
Q  15 atactattagatgtatagatcagttgccaaaaaatttcaacaacaaaagtacagttataaatc 77  Q
    |||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  14389279 ataccattagatgtatagatcagttgccaaaaaatctcaaaaacaaaagtacagttataaatc 14389217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 168 - 255
Target Start/End: Complemental strand, 45535475 - 45535393
Alignment:
Q  168 catatgatatcaaaataaatagacatacattaaaataagttatgttaagtttattcattataataatttgattgaaaaatacatgtta 255  Q
    |||||||||||||||||||||||| ||    ||||||||||||||||| |||||| |||||||||||||||||||||||| |||||||    
T  45535475 catatgatatcaaaataaatagaccta----aaaataagttatgttaa-tttattgattataataatttgattgaaaaatgcatgtta 45535393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 168 - 255
Target Start/End: Original strand, 26882193 - 26882275
Alignment:
Q  168 catatgatatcaaaataaatagacatacattaaaataagttatgttaagtttattcattataataatttgattgaaaaatacatgtta 255  Q
    |||||||||||||||||||||||| ||    |||||||||||||||| |||| || |||||||||||||||||||||||| |||||||    
T  26882193 catatgatatcaaaataaatagaccta----aaaataagttatgtta-gtttcttgattataataatttgattgaaaaatgcatgtta 26882275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 168 - 255
Target Start/End: Complemental strand, 45319181 - 45319099
Alignment:
Q  168 catatgatatcaaaataaatagacatacattaaaataagttatgttaagtttattcattataataatttgattgaaaaatacatgtta 255  Q
    ||||||||||||||||||||| || ||    |||||||||||||||| ||||||| |||||||||||||||||||||||| |||||||    
T  45319181 catatgatatcaaaataaatacaccta----aaaataagttatgtta-gtttattgattataataatttgattgaaaaatgcatgtta 45319099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 83
Target Start/End: Complemental strand, 45535612 - 45535572
Alignment:
Q  43 aaaaaatttcaacaacaaaagtacagttataaatcgatcgg 83  Q
    ||||||| |||| |||||||||||||||||||||| |||||    
T  45535612 aaaaaatctcaaaaacaaaagtacagttataaatcaatcgg 45535572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 77
Target Start/End: Complemental strand, 52706246 - 52706210
Alignment:
Q  41 ccaaaaaatttcaacaacaaaagtacagttataaatc 77  Q
    ||||||||| |||| ||||||||||||||||||||||    
T  52706246 ccaaaaaatctcaaaaacaaaagtacagttataaatc 52706210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 8e-27; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 15 - 255
Target Start/End: Complemental strand, 42315739 - 42315506
Alignment:
Q  15 atactattagatgtatagatcagttgccaaaaaatttcaacaacaaaagtacagttataaatcgatcggnnnnnnnnn---tgaatcaatgaacgtatag 111  Q
    |||||||||||||||||||||||||| |||||||| |||| |||||||||||| ||||||||| | |||            |||||||||||  ||||||    
T  42315739 atactattagatgtatagatcagttgtcaaaaaatctcaaaaacaaaagtacaattataaatcaaccggaaaaaaaaacattgaatcaatgagtgtatag 42315640  T
Q  112 attattagatgatatagtactactagcaggttgactgatcttnnnnnnnttatgggcatatgatatcaaaataaatagacatacattaaaataagttatg 211  Q
    | |||||||| ||| |   ||||||||||||||| |||||||       || |   |||||||||||||||||||||||| ||    |||||||||||||    
T  42315639 actattagataataca---ctactagcaggttgattgatcttaaaaa--ttctcaacatatgatatcaaaataaatagaccta----aaaataagttatg 42315549  T
Q  212 ttaagtttattcattataataatttgattgaaaaatacatgtta 255  Q
    ||| ||||||| |||||||||||||||||||||||| |||||||    
T  42315548 tta-gtttattgattataataatttgattgaaaaatgcatgtta 42315506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 168 - 255
Target Start/End: Original strand, 3435343 - 3435425
Alignment:
Q  168 catatgatatcaaaataaatagacatacattaaaataagttatgttaagtttattcattataataatttgattgaaaaatacatgtta 255  Q
    |||||||||||||||||||||||| ||    |||||||||||||||| ||||||| |||||||||||||||||||||||| |||||||    
T  3435343 catatgatatcaaaataaatagaccta----aaaataagttatgtta-gtttattgattataataatttgattgaaaaatgcatgtta 3435425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 168 - 255
Target Start/End: Original strand, 8583378 - 8583460
Alignment:
Q  168 catatgatatcaaaataaatagacatacattaaaataagttatgttaagtttattcattataataatttgattgaaaaatacatgtta 255  Q
    |||||||||||||||||||||||| ||    |||||||||||||||| ||||||| |||||||||||||||||||||||| |||||||    
T  8583378 catatgatatcaaaataaatagaccta----aaaataagttatgtta-gtttattgattataataatttgattgaaaaatgcatgtta 8583460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 168 - 255
Target Start/End: Original strand, 42217814 - 42217896
Alignment:
Q  168 catatgatatcaaaataaatagacatacattaaaataagttatgttaagtttattcattataataatttgattgaaaaatacatgtta 255  Q
    |||||||||||||||| ||||||| ||    |||||||||||||||| ||||||| |||||||||||||||||||||||| |||||||    
T  42217814 catatgatatcaaaatgaatagactta----aaaataagttatgtta-gtttattgattataataatttgattgaaaaatgcatgtta 42217896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 199 - 255
Target Start/End: Complemental strand, 7820737 - 7820682
Alignment:
Q  199 aaaataagttatgttaagtttattcattataataatttgattgaaaaatacatgtta 255  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||| |||||||    
T  7820737 aaaataagttatgtta-gtttattgattataataatttgattgaaaaatgcatgtta 7820682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 56398893 - 56398834
Alignment:
Q  17 actattagatgtatagatcagttgccaaaaaatttcaacaacaaaagtacagttataaatc 77  Q
    ||||||||||||||||||||||||||| ||||| |||| ||||| ||||||||||||||||    
T  56398893 actattagatgtatagatcagttgcca-aaaatctcaaaaacaagagtacagttataaatc 56398834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 168 - 255
Target Start/End: Complemental strand, 56398718 - 56398635
Alignment:
Q  168 catatgatatcaaaataaatagacatacattaaaataagttatgttaagtttattcattataataatttga-ttgaaaaatacatgtta 255  Q
    |||||||||||||||||||||||| ||    ||||||||||| ||| |||||||| ||||||||||||||| ||||||||| |||||||    
T  56398718 catatgatatcaaaataaatagaccta----aaaataagttacgtt-agtttattgattataataatttgatttgaaaaatgcatgtta 56398635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 204 - 256
Target Start/End: Complemental strand, 44930472 - 44930421
Alignment:
Q  204 aagttatgttaagtttattcattataataatttgattgaaaaatacatgttat 256  Q
    ||||||||||| ||||||| |||||||||||||||||||||||| ||||||||    
T  44930472 aagttatgtta-gtttattgattataataatttgattgaaaaatgcatgttat 44930421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 77
Target Start/End: Original strand, 42217675 - 42217711
Alignment:
Q  41 ccaaaaaatttcaacaacaaaagtacagttataaatc 77  Q
    ||||||||| |||| ||||||||||||||||||||||    
T  42217675 ccaaaaaatctcaaaaacaaaagtacagttataaatc 42217711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 1e-22; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 43489779 - 43489717
Alignment:
Q  15 atactattagatgtatagatcagttgccaaaaaatttcaacaacaaaagtacagttataaatc 77  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  43489779 atactattagatgtatagatcagttgccaaaaaatctcaaaaacaaaagtacagttataaatc 43489717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 129 - 255
Target Start/End: Complemental strand, 7148791 - 7148672
Alignment:
Q  129 tactactagcaggttgactgatcttnnnnnnnttatgggcatatgatatcaaaataaatagacatacattaaaataagttatgttaagtttattcattat 228  Q
    ||||||||||||||||| |||||||       || ||| |||||||||||||||||||||||| ||    |||||||||||||||| ||||||| |||||    
T  7148791 tactactagcaggttgattgatcttaaaaa--ttttggacatatgatatcaaaataaatagaccta----aaaataagttatgtta-gtttattaattat 7148699  T
Q  229 aataatttgattgaaaaatacatgtta 255  Q
    ||||||||||||||||||| |||||||    
T  7148698 aataatttgattgaaaaatgcatgtta 7148672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 129 - 255
Target Start/End: Complemental strand, 43489635 - 43489516
Alignment:
Q  129 tactactagcaggttgactgatcttnnnnnnnttatgggcatatgatatcaaaataaatagacatacattaaaataagttatgttaagtttattcattat 228  Q
    ||||||||||||||||| |||||||       || ||| |||||||||||||||||||||||| ||    |||||||||||||||| ||||||| |||||    
T  43489635 tactactagcaggttgattgatcttaaaaa--ttctggacatatgatatcaaaataaatagaccta----aaaataagttatgtta-gtttattgattat 43489543  T
Q  229 aataatttgattgaaaaatacatgtta 255  Q
    ||||||||||||||||||| |||||||    
T  43489542 aataatttgattgaaaaatgcatgtta 43489516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 168 - 255
Target Start/End: Original strand, 29259645 - 29259727
Alignment:
Q  168 catatgatatcaaaataaatagacatacattaaaataagttatgttaagtttattcattataataatttgattgaaaaatacatgtta 255  Q
    |||||||||||||||||||||||| ||    |||||||||||||||| ||||||| |||||||||||||||||||||||| |||||||    
T  29259645 catatgatatcaaaataaatagaccta----aaaataagttatgtta-gtttattgattataataatttgattgaaaaatgcatgtta 29259727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 163 - 255
Target Start/End: Original strand, 40264645 - 40264732
Alignment:
Q  163 atgggcatatgatatcaaaataaatagacatacattaaaataagttatgttaagtttattcattataataatttgattgaaaaatacatgtta 255  Q
    |||| |||||||||||||||||||||||  ||    |||||||||||||||| ||||||| |||||||||||||||||||||||| |||||||    
T  40264645 atggacatatgatatcaaaataaatagatcta----aaaataagttatgtta-gtttattgattataataatttgattgaaaaatgcatgtta 40264732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 168 - 255
Target Start/End: Complemental strand, 2113507 - 2113425
Alignment:
Q  168 catatgatatcaaaataaatagacatacattaaaataagttatgttaagtttattcattataataatttgattgaaaaatacatgtta 255  Q
    |||||||||||||||||||||||| ||    |||||||||||| ||| ||||||| |||||||||||||||||||||||| |||||||    
T  2113507 catatgatatcaaaataaatagaccta----aaaataagttatttta-gtttattgattataataatttgattgaaaaatgcatgtta 2113425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 168 - 255
Target Start/End: Complemental strand, 42275674 - 42275592
Alignment:
Q  168 catatgatatcaaaataaatagacatacattaaaataagttatgttaagtttattcattataataatttgattgaaaaatacatgtta 255  Q
    ||||| |||||||||||||||||| ||    |||||||||||||||| ||||||| |||||||||||||||||||||||| |||||||    
T  42275674 catataatatcaaaataaatagaccta----aaaataagttatgtta-gtttattgattataataatttgattgaaaaatgcatgtta 42275592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 129 - 253
Target Start/End: Original strand, 10795704 - 10795821
Alignment:
Q  129 tactactagcaggttgactgatcttnnnnnnnttatgggcatatgatatcaaaataaatagacatacattaaaataagttatgttaagtttattcattat 228  Q
    ||||||||||||||||| |||||||       || ||| |||||||||||||||||||||||| ||    ||||||||||| ||||| |||||| |||||    
T  10795704 tactactagcaggttgattgatcttaaaaa--ttctggacatatgatatcaaaataaatagaccta----aaaataagttaagttaa-tttattgattat 10795796  T
Q  229 aataatttgattgaaaaatacatgt 253  Q
    ||||||||||||||||||| |||||    
T  10795797 aataatttgattgaaaaatgcatgt 10795821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 129 - 255
Target Start/End: Original strand, 41386199 - 41386319
Alignment:
Q  129 tactactagcaggttgactgatcttnnnnnnnttatgggcatatgatatcaaaataaatagacatacattaaaataagttatgttaagtttattcattat 228  Q
    ||||||||||||||||| |||||||       || ||| |||||||||||||||||||||||| ||    ||||||||||||||| |||||||| |||||    
T  41386199 tactactagcaggttgattgatcttaaaaa--ttctggacatatgatatcaaaataaatagaccta----aaaataagttatgtt-agtttattgattat 41386291  T
Q  229 aataatttgatt-gaaaaatacatgtta 255  Q
    |||||||||||| ||||||| |||||||    
T  41386292 aataatttgattggaaaaatgcatgtta 41386319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 129 - 255
Target Start/End: Original strand, 43604701 - 43604820
Alignment:
Q  129 tactactagcaggttgactgatcttnnnnnnnttatgggcatatgatatcaaaataaatagacatacattaaaataagttatgttaagtttattcattat 228  Q
    ||||||||||||||||| |||||||       || ||| ||||| |||||||||||||||||  ||    |||||||||||||||| ||||||| |||||    
T  43604701 tactactagcaggttgattgatcttaaaaa--ttctggacatataatatcaaaataaatagatcta----aaaataagttatgtta-gtttattgattat 43604793  T
Q  229 aataatttgattgaaaaatacatgtta 255  Q
    ||||||||||||||||||| |||||||    
T  43604794 aataatttgattgaaaaatgcatgtta 43604820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 168 - 255
Target Start/End: Complemental strand, 4655786 - 4655704
Alignment:
Q  168 catatgatatcaaaataaatagacatacattaaaataagttatgttaagtttattcattataataatttgattgaaaaatacatgtta 255  Q
    ||||||||||||||| |||||||| ||    |||||||||||||||| ||||||| |||||||||| ||||||||||||| |||||||    
T  4655786 catatgatatcaaaacaaatagaccta----aaaataagttatgtta-gtttattgattataataaattgattgaaaaatgcatgtta 4655704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 254
Target Start/End: Complemental strand, 9458230 - 9458144
Alignment:
Q  163 atgggcatatgatatcaaaataaatagacatacattaaaataagttatgttaagtttattcattataataatttgattgaaaaatacatgtt 254  Q
    |||| |||||||||||||||||||||||| ||    ||||||||||||||| |||||||| ||||| ||||||| |||||||||| ||||||    
T  9458230 atggacatatgatatcaaaataaatagaccta----aaaataagttatgtt-agtttattgattattataatttaattgaaaaatgcatgtt 9458144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 168 - 255
Target Start/End: Original strand, 41964958 - 41965041
Alignment:
Q  168 catatgatatcaaaa-taaatagacatacattaaaataagttatgttaagtttattcattataataatttgattgaaaaatacatgtta 255  Q
    ||||||||||||||| ||||||||| ||    |||||||||||||||  ||||||| |||||||||||||||||||||||| |||||||    
T  41964958 catatgatatcaaaaataaatagaccta----aaaataagttatgttg-gtttattgattataataatttgattgaaaaatgcatgtta 41965041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 77
Target Start/End: Original strand, 29259500 - 29259536
Alignment:
Q  41 ccaaaaaatttcaacaacaaaagtacagttataaatc 77  Q
    ||||||||| |||| ||||||||||||||||||||||    
T  29259500 ccaaaaaatctcaaaaacaaaagtacagttataaatc 29259536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 77
Target Start/End: Original strand, 41386095 - 41386131
Alignment:
Q  41 ccaaaaaatttcaacaacaaaagtacagttataaatc 77  Q
    ||||||||| |||| ||||||||||||||||||||||    
T  41386095 ccaaaaaatctcaaaaacaaaagtacagttataaatc 41386131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 77
Target Start/End: Original strand, 41964820 - 41964856
Alignment:
Q  41 ccaaaaaatttcaacaacaaaagtacagttataaatc 77  Q
    ||||||||| |||| ||||||||||||||||||||||    
T  41964820 ccaaaaaatctcaaaaacaaaagtacagttataaatc 41964856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 5e-22; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 16 - 77
Target Start/End: Complemental strand, 33475381 - 33475320
Alignment:
Q  16 tactattagatgtatagatcagttgccaaaaaatttcaacaacaaaagtacagttataaatc 77  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  33475381 tactattagatgtatagattagttgccaaaaaatttcaaaaacaaaagtacagttataaatc 33475320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 161 - 255
Target Start/End: Original strand, 35089467 - 35089556
Alignment:
Q  161 ttatgggcatatgatatcaaaataaatagacatacattaaaataagttatgttaagtttattcattataataatttgattgaaaaatacatgtta 255  Q
    |||||| |||||||||||||||||||||||| ||    ||||||||||||||||| |||||| |||||||||||||||||||||||| |||||||    
T  35089467 ttatggacatatgatatcaaaataaatagaccta----aaaataagttatgttaa-tttattgattataataatttgattgaaaaatgcatgtta 35089556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 15 - 82
Target Start/End: Original strand, 12252626 - 12252693
Alignment:
Q  15 atactattagatgtatagatcagttgccaaaaaatttcaacaacaaaagtacagttataaatcgatcg 82  Q
    |||||||||||| |||||||||||||||||||||| |||| |||||||||||||||||||||| ||||    
T  12252626 atactattagatatatagatcagttgccaaaaaatctcaaaaacaaaagtacagttataaatcaatcg 12252693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 129 - 255
Target Start/End: Original strand, 27417988 - 27418107
Alignment:
Q  129 tactactagcaggttgactgatcttnnnnnnnttatgggcatatgatatcaaaataaatagacatacattaaaataagttatgttaagtttattcattat 228  Q
    ||||||||||||||||| |||||||       || ||| |||||||||||||||||||||||| ||    |||||||||||||||| ||||||| |||||    
T  27417988 tactactagcaggttgattgatcttaaaaa--ttctggacatatgatatcaaaataaatagaccta----aaaataagttatgtta-gtttattgattat 27418080  T
Q  229 aataatttgattgaaaaatacatgtta 255  Q
    ||||||||||||||||||| |||||||    
T  27418081 aataatttgattgaaaaatgcatgtta 27418107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 129 - 255
Target Start/End: Original strand, 43057008 - 43057127
Alignment:
Q  129 tactactagcaggttgactgatcttnnnnnnnttatgggcatatgatatcaaaataaatagacatacattaaaataagttatgttaagtttattcattat 228  Q
    ||||||||||||||||| |||||||       || ||| |||||||||||||||||||||||| ||    ||||||||||||||||| |||||| |||||    
T  43057008 tactactagcaggttgattgatcttaaaaa--ttctggacatatgatatcaaaataaatagaccta----aaaataagttatgttaa-tttattgattat 43057100  T
Q  229 aataatttgattgaaaaatacatgtta 255  Q
    ||||||||||||||||||| |||||||    
T  43057101 aataatttgattgaaaaatgcatgtta 43057127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 168 - 255
Target Start/End: Original strand, 12252804 - 12252886
Alignment:
Q  168 catatgatatcaaaataaatagacatacattaaaataagttatgttaagtttattcattataataatttgattgaaaaatacatgtta 255  Q
    |||||||||||||||||||||||| ||    |||||||||||||||| ||||||| |||||||||||||||||||||||| |||||||    
T  12252804 catatgatatcaaaataaatagaccta----aaaataagttatgtta-gtttattgattataataatttgattgaaaaatgcatgtta 12252886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 163 - 255
Target Start/End: Complemental strand, 152577 - 152490
Alignment:
Q  163 atgggcatatgatatcaaaataaatagacatacattaaaataagttatgttaagtttattcattataataatttgattgaaaaatacatgtta 255  Q
    |||| |||||||||||||||||||||||  ||    |||||||||||||||| ||||||| |||||||||||||||||||||||| |||||||    
T  152577 atggacatatgatatcaaaataaatagatcta----aaaataagttatgtta-gtttattgattataataatttgattgaaaaatgcatgtta 152490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 129 - 255
Target Start/End: Complemental strand, 47912990 - 47912871
Alignment:
Q  129 tactactagcaggttgactgatcttnnnnnnnttatgggcatatgatatcaaaataaatagacatacattaaaataagttatgttaagtttattcattat 228  Q
    ||||||||||||||||| |||||||       || ||| ||||| |||||||||||||||||| ||    |||||||| |||||||| |||||| |||||    
T  47912990 tactactagcaggttgattgatcttaaaaa--ttctggacatataatatcaaaataaatagaccta----aaaataagctatgttaa-tttattgattat 47912898  T
Q  229 aataatttgattgaaaaatacatgtta 255  Q
    ||||||||||||||||||| |||||||    
T  47912897 aataatttgattgaaaaatgcatgtta 47912871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 129 - 255
Target Start/End: Original strand, 47913663 - 47913782
Alignment:
Q  129 tactactagcaggttgactgatcttnnnnnnnttatgggcatatgatatcaaaataaatagacatacattaaaataagttatgttaagtttattcattat 228  Q
    ||||||||||||||||| |||||||       || ||| ||||| |||||||||||||||||| ||    |||||||| |||||||| |||||| |||||    
T  47913663 tactactagcaggttgattgatcttaaaaa--ttctggacatataatatcaaaataaatagaccta----aaaataagctatgttaa-tttattgattat 47913755  T
Q  229 aataatttgattgaaaaatacatgtta 255  Q
    ||||||||||||||||||| |||||||    
T  47913756 aataatttgattgaaaaatgcatgtta 47913782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 129 - 255
Target Start/End: Complemental strand, 33475241 - 33475122
Alignment:
Q  129 tactactagcaggttgactgatcttnnnnnnnttatgggcatatgatatcaaaataaatagacatacattaaaataagttatgttaagtttattcattat 228  Q
    ||||||||||||||||| |||||||       || ||| ||||||||||| |||||||||||| ||    ||||||||||||| || ||||||| |||||    
T  33475241 tactactagcaggttgattgatcttaaaaa--ttctggacatatgatatccaaataaatagaccta----aaaataagttatgata-gtttattgattat 33475149  T
Q  229 aataatttgattgaaaaatacatgtta 255  Q
    |||||||||||||||| || |||||||    
T  33475148 aataatttgattgaaatatgcatgtta 33475122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 255
Target Start/End: Complemental strand, 30111465 - 30111425
Alignment:
Q  215 agtttattcattataataatttgattgaaaaatacatgtta 255  Q
    |||||||| |||||||||||||||||||||||| |||||||    
T  30111465 agtttattgattataataatttgattgaaaaatgcatgtta 30111425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 77
Target Start/End: Original strand, 27417885 - 27417921
Alignment:
Q  41 ccaaaaaatttcaacaacaaaagtacagttataaatc 77  Q
    ||||||||| |||| ||||||||||||||||||||||    
T  27417885 ccaaaaaatctcaaaaacaaaagtacagttataaatc 27417921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 77
Target Start/End: Complemental strand, 30111642 - 30111606
Alignment:
Q  41 ccaaaaaatttcaacaacaaaagtacagttataaatc 77  Q
    ||||||||| |||| ||||||||||||||||||||||    
T  30111642 ccaaaaaatctcaaaaacaaaagtacagttataaatc 30111606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 77
Target Start/End: Complemental strand, 47913095 - 47913059
Alignment:
Q  41 ccaaaaaatttcaacaacaaaagtacagttataaatc 77  Q
    ||||||||| |||| ||||||||||||||||||||||    
T  47913095 ccaaaaaatctcaaaaacaaaagtacagttataaatc 47913059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 77
Target Start/End: Original strand, 47913558 - 47913594
Alignment:
Q  41 ccaaaaaatttcaacaacaaaagtacagttataaatc 77  Q
    ||||||||| |||| ||||||||||||||||||||||    
T  47913558 ccaaaaaatctcaaaaacaaaagtacagttataaatc 47913594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 2e-21; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 168 - 290
Target Start/End: Complemental strand, 26556569 - 26556454
Alignment:
Q  168 catatgatatcaaaataaatagacatacattaaaataagttatgttaagtttattcattataataatttgattgaaaaatacatgttattataggaagaa 267  Q
    |||||||||||||||||||||||| ||    |||||||||||||||| ||||||| |||||||||||||||||||||||| ||||   ||||||| ||||    
T  26556569 catatgatatcaaaataaatagaccta----aaaataagttatgtta-gtttattgattataataatttgattgaaaaatgcatg---ttataggtagaa 26556478  T
Q  268 aaa-acaagaagaaaaattattat 290  Q
    |||  |||| ||||||||||||||    
T  26556477 aaatgcaagtagaaaaattattat 26556454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 129 - 255
Target Start/End: Original strand, 36054350 - 36054469
Alignment:
Q  129 tactactagcaggttgactgatcttnnnnnnnttatgggcatatgatatcaaaataaatagacatacattaaaataagttatgttaagtttattcattat 228  Q
    ||||||||||||||||| |||||||       || ||| |||||||||||||||||||||||| ||    |||||||||||||||| ||||||| |||||    
T  36054350 tactactagcaggttgattgatcttaaaaa--ttctggacatatgatatcaaaataaatagaccta----aaaataagttatgtta-gtttattgattat 36054442  T
Q  229 aataatttgattgaaaaatacatgtta 255  Q
    ||||||||||||||||||| |||||||    
T  36054443 aataatttgattgaaaaatgcatgtta 36054469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 129 - 255
Target Start/End: Original strand, 38629150 - 38629269
Alignment:
Q  129 tactactagcaggttgactgatcttnnnnnnnttatgggcatatgatatcaaaataaatagacatacattaaaataagttatgttaagtttattcattat 228  Q
    ||||||||||||||||| |||||||       || ||| |||||||||||||||||||||||| ||    |||||||||||||||| ||||||| |||||    
T  38629150 tactactagcaggttgattgatcttaaaaa--ttctggacatatgatatcaaaataaatagaccta----aaaataagttatgtta-gtttattgattat 38629242  T
Q  229 aataatttgattgaaaaatacatgtta 255  Q
    ||||||||||||||||||| |||||||    
T  38629243 aataatttgattgaaaaatgcatgtta 38629269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 23754400 - 23754338
Alignment:
Q  15 atactattagatgtatagatcagttgccaaaaaatttcaacaacaaaagtacagttataaatc 77  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||    
T  23754400 atactattagatgtatagatcagttgccaaaaaatctcaaaaacaaaagtacagttattaatc 23754338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 168 - 255
Target Start/End: Original strand, 24150203 - 24150285
Alignment:
Q  168 catatgatatcaaaataaatagacatacattaaaataagttatgttaagtttattcattataataatttgattgaaaaatacatgtta 255  Q
    |||||||||||||||||||||||| ||    |||||||||||||||| ||||||| |||||||||||||||||||||||| |||||||    
T  24150203 catatgatatcaaaataaatagaccta----aaaataagttatgtta-gtttattgattataataatttgattgaaaaatgcatgtta 24150285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 168 - 255
Target Start/End: Complemental strand, 30589555 - 30589473
Alignment:
Q  168 catatgatatcaaaataaatagacatacattaaaataagttatgttaagtttattcattataataatttgattgaaaaatacatgtta 255  Q
    |||||||||||||||||||||||| ||    |||||||||||||||| ||||||| |||||||||||||||||||||||| |||||||    
T  30589555 catatgatatcaaaataaatagaccta----aaaataagttatgtta-gtttattgattataataatttgattgaaaaatgcatgtta 30589473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 168 - 255
Target Start/End: Original strand, 50899800 - 50899882
Alignment:
Q  168 catatgatatcaaaataaatagacatacattaaaataagttatgttaagtttattcattataataatttgattgaaaaatacatgtta 255  Q
    |||||||||||||||||||||||| ||    |||||||||||||||| ||||||| |||||||||||||||||||||||| |||||||    
T  50899800 catatgatatcaaaataaatagaccta----aaaataagttatgtta-gtttattgattataataatttgattgaaaaatgcatgtta 50899882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 129 - 255
Target Start/End: Complemental strand, 35731622 - 35731503
Alignment:
Q  129 tactactagcaggttgactgatcttnnnnnnnttatgggcatatgatatcaaaataaatagacatacattaaaataagttatgttaagtttattcattat 228  Q
    ||||||||||||||||| |||||||       || ||| ||||| |||||||||||||||||| ||    |||||||||||||||| ||||||| |||||    
T  35731622 tactactagcaggttgattgatcttaaaaa--ttctggacatataatatcaaaataaatagaccta----aaaataagttatgtta-gtttattgattat 35731530  T
Q  229 aataatttgattgaaaaatacatgtta 255  Q
    ||||||||||||||||||| |||||||    
T  35731529 aataatttgattgaaaaatgcatgtta 35731503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 168 - 255
Target Start/End: Original strand, 19551533 - 19551615
Alignment:
Q  168 catatgatatcaaaataaatagacatacattaaaataagttatgttaagtttattcattataataatttgattgaaaaatacatgtta 255  Q
    |||||||||||||||||||||||| ||    |||||||||||||||| ||||||| ||||||||||||||||| |||||| |||||||    
T  19551533 catatgatatcaaaataaatagaccta----aaaataagttatgtta-gtttattgattataataatttgattcaaaaatgcatgtta 19551615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 23697827 - 23697765
Alignment:
Q  15 atactattagatgtatagatcagttgccaaaaaatttcaacaacaaaagtacagttataaatc 77  Q
    |||||||||||||||||||| |||||||||||||| |||| ||||||||||||||||| ||||    
T  23697827 atactattagatgtatagatgagttgccaaaaaatctcaaaaacaaaagtacagttattaatc 23697765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 23716282 - 23716220
Alignment:
Q  15 atactattagatgtatagatcagttgccaaaaaatttcaacaacaaaagtacagttataaatc 77  Q
    |||||||||||||||||||| |||||||||||||| |||| ||||||||||||||||| ||||    
T  23716282 atactattagatgtatagatgagttgccaaaaaatctcaaaaacaaaagtacagttattaatc 23716220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 23734738 - 23734676
Alignment:
Q  15 atactattagatgtatagatcagttgccaaaaaatttcaacaacaaaagtacagttataaatc 77  Q
    |||||||||||||||||||| |||||||||||||| |||| ||||||||||||||||| ||||    
T  23734738 atactattagatgtatagatgagttgccaaaaaatctcaaaaacaaaagtacagttattaatc 23734676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 129 - 255
Target Start/End: Original strand, 26005192 - 26005311
Alignment:
Q  129 tactactagcaggttgactgatcttnnnnnnnttatgggcatatgatatcaaaataaatagacatacattaaaataagttatgttaagtttattcattat 228  Q
    ||||||||||||||||| |||||||       |||||| ||||||||||||||||||||| ||  |    ||| |||||||||||| ||||||| |||||    
T  26005192 tactactagcaggttgattgatcttaaaaa--ttatggacatatgatatcaaaataaataaaccaa----aaattaagttatgtta-gtttattgattat 26005284  T
Q  229 aataatttgattgaaaaatacatgtta 255  Q
    ||||||||||||||||||| |||||||    
T  26005285 aataatttgattgaaaaatgcatgtta 26005311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 129 - 255
Target Start/End: Original strand, 26292902 - 26293021
Alignment:
Q  129 tactactagcaggttgactgatcttnnnnnnnttatgggcatatgatatcaaaataaatagacatacattaaaataagttatgttaagtttattcattat 228  Q
    ||||||||||||||||| |||||||       || ||| |||||| |||||||||||||| || ||    |||||||||||||||| ||||||| |||||    
T  26292902 tactactagcaggttgattgatcttaaaaa--ttctggacatatgctatcaaaataaatacaccta----aaaataagttatgtta-gtttattgattat 26292994  T
Q  229 aataatttgattgaaaaatacatgtta 255  Q
    ||||||||||||||||||| |||||||    
T  26292995 aataatttgattgaaaaatgcatgtta 26293021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 168 - 255
Target Start/End: Original strand, 2125074 - 2125156
Alignment:
Q  168 catatgatatcaaaataaatagacatacattaaaataagttatgttaagtttattcattataataatttgattgaaaaatacatgtta 255  Q
    |||||||||| ||||||||||||| ||    |||||||||||||||| ||||||| ||||||||||||||||| |||||| |||||||    
T  2125074 catatgatataaaaataaatagaccta----aaaataagttatgtta-gtttattgattataataatttgattaaaaaatgcatgtta 2125156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 77
Target Start/End: Original strand, 2124933 - 2124969
Alignment:
Q  41 ccaaaaaatttcaacaacaaaagtacagttataaatc 77  Q
    ||||||||| |||| ||||||||||||||||||||||    
T  2124933 ccaaaaaatctcaaaaacaaaagtacagttataaatc 2124969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 77
Target Start/End: Original strand, 26292798 - 26292834
Alignment:
Q  41 ccaaaaaatttcaacaacaaaagtacagttataaatc 77  Q
    ||||||||| |||| ||||||||||||||||||||||    
T  26292798 ccaaaaaatctcaaaaacaaaagtacagttataaatc 26292834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 77
Target Start/End: Complemental strand, 26556710 - 26556674
Alignment:
Q  41 ccaaaaaatttcaacaacaaaagtacagttataaatc 77  Q
    ||||||||| |||| ||||||||||||||||||||||    
T  26556710 ccaaaaaatctcaaaaacaaaagtacagttataaatc 26556674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 77
Target Start/End: Complemental strand, 35731723 - 35731687
Alignment:
Q  41 ccaaaaaatttcaacaacaaaagtacagttataaatc 77  Q
    ||||||||| |||| ||||||||||||||||||||||    
T  35731723 ccaaaaaatctcaaaaacaaaagtacagttataaatc 35731687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 77
Target Start/End: Original strand, 36054247 - 36054283
Alignment:
Q  41 ccaaaaaatttcaacaacaaaagtacagttataaatc 77  Q
    ||||||||| |||| ||||||||||||||||||||||    
T  36054247 ccaaaaaatctcaaaaacaaaagtacagttataaatc 36054283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 2e-21; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 168 - 290
Target Start/End: Original strand, 21736041 - 21736156
Alignment:
Q  168 catatgatatcaaaataaatagacatacattaaaataagttatgttaagtttattcattataataatttgattgaaaaatacatgttattataggaagaa 267  Q
    |||||||||||||||||||||||| ||    |||||||||||||||| ||||||| |||||||||||||||||||||||| ||||   ||| ||| ||||    
T  21736041 catatgatatcaaaataaatagaccta----aaaataagttatgtta-gtttattgattataataatttgattgaaaaatgcatg---ttacaggtagaa 21736132  T
Q  268 aaa-acaagaagaaaaattattat 290  Q
    ||| ||||| ||||||||||||||    
T  21736133 aaatacaagtagaaaaattattat 21736156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 168 - 255
Target Start/End: Original strand, 6288923 - 6289005
Alignment:
Q  168 catatgatatcaaaataaatagacatacattaaaataagttatgttaagtttattcattataataatttgattgaaaaatacatgtta 255  Q
    |||||||||||||||||||||||| ||    |||||||||||||||| ||||||| |||||||||||||||||||||||| |||||||    
T  6288923 catatgatatcaaaataaatagaccta----aaaataagttatgtta-gtttattgattataataatttgattgaaaaatgcatgtta 6289005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 21735861 - 21735923
Alignment:
Q  15 atactattagatgtatagatcagttgccaaaaaatttcaacaacaaaagtacagttataaatc 77  Q
    |||||||||||||||| |||||||||||||||||| |||| ||||||||||||||||||||||    
T  21735861 atactattagatgtatggatcagttgccaaaaaatctcaaaaacaaaagtacagttataaatc 21735923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 129 - 247
Target Start/End: Original strand, 7487483 - 7487594
Alignment:
Q  129 tactactagcaggttgactgatcttnnnnnnnttatgggcatatgatatcaaaataaatagacatacattaaaataagttatgttaagtttattcattat 228  Q
    ||||||||||||||||| |||||||       || ||| |||||||||||||||||||||||| ||    |||||||||||||||| ||||||| |||||    
T  7487483 tactactagcaggttgattgatcttaaaaa--ttctggacatatgatatcaaaataaatagaccta----aaaataagttatgtta-gtttattgattat 7487575  T
Q  229 aataatttgattgaaaaat 247  Q
    |||||||||||||||||||    
T  7487576 aataatttgattgaaaaat 7487594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 129 - 255
Target Start/End: Original strand, 42626742 - 42626861
Alignment:
Q  129 tactactagcaggttgactgatcttnnnnnnnttatgggcatatgatatcaaaataaatagacatacattaaaataagttatgttaagtttattcattat 228  Q
    ||||||||||||||||| |||||||       || ||| |||||||||||||||||||||||  ||    ||||||||||||||| |||||||| |||||    
T  42626742 tactactagcaggttgattgatcttaaaaa--ttctggacatatgatatcaaaataaatagaatta----aaaataagttatgtt-agtttattgattat 42626834  T
Q  229 aataatttgattgaaaaatacatgtta 255  Q
    ||||||||||||||||||| |||||||    
T  42626835 aataatttgattgaaaaatgcatgtta 42626861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 168 - 247
Target Start/End: Complemental strand, 45547625 - 45547551
Alignment:
Q  168 catatgatatcaaaataaatagacatacattaaaataagttatgttaagtttattcattataataatttgattgaaaaat 247  Q
    ||||||||||||||||||||||||  |    |||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  45547625 catatgatatcaaaataaatagaccaa----aaaataagttatgtta-gtttattgattataataatttgattgaaaaat 45547551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 35171629 - 35171686
Alignment:
Q  19 tattagatgtatagatcagttgccaaaaaatttcaacaacaaaagtacagttataaat 76  Q
    ||||||||||||| ||||||||||||||||| |||| |||||||||||| ||||||||    
T  35171629 tattagatgtataaatcagttgccaaaaaatctcaaaaacaaaagtacaattataaat 35171686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 199 - 255
Target Start/End: Original strand, 35172023 - 35172078
Alignment:
Q  199 aaaataagttatgttaagtttattcattataataatttgattgaaaaatacatgtta 255  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||| |||||||    
T  35172023 aaaataagttatgtta-gtttattgattataataatttgattgaaaaatgcatgtta 35172078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 77
Target Start/End: Complemental strand, 29941748 - 29941712
Alignment:
Q  41 ccaaaaaatttcaacaacaaaagtacagttataaatc 77  Q
    ||||||||| |||| ||||||||||||||||||||||    
T  29941748 ccaaaaaatctcaaaaacaaaagtacagttataaatc 29941712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 8e-21; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 129 - 255
Target Start/End: Original strand, 11633025 - 11633144
Alignment:
Q  129 tactactagcaggttgactgatcttnnnnnnnttatgggcatatgatatcaaaataaatagacatacattaaaataagttatgttaagtttattcattat 228  Q
    ||||||||||||||||| |||||||       || ||| |||||||||||||||||||||||| ||    |||||||||||||||| ||||||| |||||    
T  11633025 tactactagcaggttgattgatcttaaaaa--ttctggacatatgatatcaaaataaatagaccta----aaaataagttatgtta-gtttattgattat 11633117  T
Q  229 aataatttgattgaaaaatacatgtta 255  Q
    ||||||||||||||||||| |||||||    
T  11633118 aataatttgattgaaaaatgcatgtta 11633144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 168 - 255
Target Start/End: Original strand, 3603843 - 3603925
Alignment:
Q  168 catatgatatcaaaataaatagacatacattaaaataagttatgttaagtttattcattataataatttgattgaaaaatacatgtta 255  Q
    |||||||||||||||||||||||| ||    |||||||||||||||| ||||||| ||||||||||||||||| |||||| |||||||    
T  3603843 catatgatatcaaaataaatagaccta----aaaataagttatgtta-gtttattgattataataatttgatttaaaaatgcatgtta 3603925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 168 - 290
Target Start/End: Original strand, 13950168 - 13950282
Alignment:
Q  168 catatgatatcaaaataaatagacatacattaaaataagttatgttaagtttattcattataataatttgattgaaaaatacatgttattataggaagaa 267  Q
    |||||||||||||||||||||||| ||     |||||||||| |||| ||||||| |||||||||||||||||||||||| ||||   ||| ||| ||||    
T  13950168 catatgatatcaaaataaatagaccta-----aaataagttacgtta-gtttattgattataataatttgattgaaaaatgcatg---ttacaggtagaa 13950258  T
Q  268 aaa-acaagaagaaaaattattat 290  Q
    ||| ||||| ||||||||||||||    
T  13950259 aaatacaagtagaaaaattattat 13950282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 77
Target Start/End: Original strand, 11632923 - 11632959
Alignment:
Q  41 ccaaaaaatttcaacaacaaaagtacagttataaatc 77  Q
    ||||||||| |||| ||||||||||||||||||||||    
T  11632923 ccaaaaaatctcaaaaacaaaagtacagttataaatc 11632959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 1e-19; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 169 - 255
Target Start/End: Original strand, 3109727 - 3109808
Alignment:
Q  169 atatgatatcaaaataaatagacatacattaaaataagttatgttaagtttattcattataataatttgattgaaaaatacatgtta 255  Q
    ||||||||||||||||||||||| ||    |||||||||||||||| ||||||| |||||||||||||||||||||||| |||||||    
T  3109727 atatgatatcaaaataaatagaccta----aaaataagttatgtta-gtttattgattataataatttgattgaaaaatgcatgtta 3109808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 129 - 247
Target Start/End: Original strand, 6476085 - 6476196
Alignment:
Q  129 tactactagcaggttgactgatcttnnnnnnnttatgggcatatgatatcaaaataaatagacatacattaaaataagttatgttaagtttattcattat 228  Q
    ||||||||||||||||| |||||||       || ||| |||||||||||||||||||||||| ||    |||||||||||||||| ||||||| |||||    
T  6476085 tactactagcaggttgattgatcttaaaaa--ttctggacatatgatatcaaaataaatagaccta----aaaataagttatgtta-gtttattgattat 6476177  T
Q  229 aataatttgattgaaaaat 247  Q
    |||||||||||||||||||    
T  6476178 aataatttgattgaaaaat 6476196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 163 - 254
Target Start/End: Original strand, 29865115 - 29865201
Alignment:
Q  163 atgggcatatgatatcaaaataaatagacatacattaaaataagttatgttaagtttattcattataataatttgattgaaaaatacatgtt 254  Q
    |||| |||||||||||||||||||||||| ||    |||||||||||||||| ||||||| ||||| |||||||||||||||||| ||||||    
T  29865115 atggacatatgatatcaaaataaatagaccta----aaaataagttatgtta-gtttattgattattataatttgattgaaaaatgcatgtt 29865201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 77
Target Start/End: Original strand, 6475980 - 6476016
Alignment:
Q  41 ccaaaaaatttcaacaacaaaagtacagttataaatc 77  Q
    ||||||||| |||| ||||||||||||||||||||||    
T  6475980 ccaaaaaatctcaaaaacaaaagtacagttataaatc 6476016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 163 - 254
Target Start/End: Original strand, 20810 - 20896
Alignment:
Q  163 atgggcatatgatatcaaaataaatagacatacattaaaataagttatgttaagtttattcattataataatttgattgaaaaatacatgtt 254  Q
    |||| |||||||||||||||||||||||| ||    |||||||||||||||| ||||||| ||||| |||||||||||||||||| ||||||    
T  20810 atggacatatgatatcaaaataaatagaccta----aaaataagttatgtta-gtttattgattattataatttgattgaaaaatgcatgtt 20896  T

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Target: scaffold0153 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 129 - 255
Target Start/End: Original strand, 34147 - 34266
Alignment:
Q  129 tactactagcaggttgactgatcttnnnnnnnttatgggcatatgatatcaaaataaatagacatacattaaaataagttatgttaagtttattcattat 228  Q
    ||||||||||||||||| |||||||       || ||| ||||||||||||||||||||| || ||    ||||||| |||||||| ||||||| |||||    
T  34147 tactactagcaggttgattgatcttaaaaa--ttctggacatatgatatcaaaataaataaaccta----aaaataaattatgtta-gtttattgattat 34239  T
Q  229 aataatttgattgaaaaatacatgtta 255  Q
    ||||||||||||||||||| |||||||    
T  34240 aataatttgattgaaaaatgcatgtta 34266  T

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Target: scaffold0153; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 77
Target Start/End: Original strand, 34043 - 34079
Alignment:
Q  41 ccaaaaaatttcaacaacaaaagtacagttataaatc 77  Q
    ||||||||| |||| ||||||||||||||||||||||    
T  34043 ccaaaaaatctcaaaaacaaaagtacagttataaatc 34079  T

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Target: scaffold0016 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 129 - 255
Target Start/End: Original strand, 81115 - 81234
Alignment:
Q  129 tactactagcaggttgactgatcttnnnnnnnttatgggcatatgatatcaaaataaatagacatacattaaaataagttatgttaagtttattcattat 228  Q
    ||||||||||||||||| |||||||       || ||| ||||||||||||||||||||| || ||    ||||||| |||||||| ||||||| |||||    
T  81115 tactactagcaggttgattgatcttaaaaa--ttctggacatatgatatcaaaataaataaaccta----aaaataaattatgtta-gtttattgattat 81207  T
Q  229 aataatttgattgaaaaatacatgtta 255  Q
    ||||||||||||||||||| |||||||    
T  81208 aataatttgattgaaaaatgcatgtta 81234  T

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Target: scaffold0016; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 77
Target Start/End: Original strand, 81011 - 81047
Alignment:
Q  41 ccaaaaaatttcaacaacaaaagtacagttataaatc 77  Q
    ||||||||| |||| ||||||||||||||||||||||    
T  81011 ccaaaaaatctcaaaaacaaaagtacagttataaatc 81047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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